Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018512.01.T01 | XP_013454794.1 | 92.462 | 199 | 13 | 1 | 1 | 197 | 1 | 199 | 2.28E-113 | 331 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018512.01.T01 | Q9C523 | 60.215 | 186 | 67 | 1 | 12 | 197 | 7 | 185 | 8.43E-80 | 238 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018512.01.T01 | I3S4L6 | 92.462 | 199 | 13 | 1 | 1 | 197 | 1 | 199 | 1.09e-113 | 331 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048952.01 | MsG0480018512.01 | 0.801653 | 8.135334e-49 | 3.906155e-46 |
| MsG0180000402.01 | MsG0480018512.01 | 0.800472 | 1.418707e-48 | 6.611341e-46 |
| MsG0180000741.01 | MsG0480018512.01 | 0.800760 | 1.239024e-48 | 5.816311e-46 |
| MsG0180001565.01 | MsG0480018512.01 | 0.801887 | 7.282660e-49 | 3.517858e-46 |
| MsG0180001566.01 | MsG0480018512.01 | 0.829346 | 5.419689e-55 | 5.532653e-52 |
| MsG0180002952.01 | MsG0480018512.01 | 0.801377 | 9.266367e-49 | 4.418469e-46 |
| MsG0180004796.01 | MsG0480018512.01 | 0.803189 | 3.924614e-49 | 1.959690e-46 |
| MsG0280011336.01 | MsG0480018512.01 | 0.807446 | 5.033851e-50 | 2.804412e-47 |
| MsG0380014576.01 | MsG0480018512.01 | 0.809802 | 1.580650e-50 | 9.370733e-48 |
| MsG0480018512.01 | MsG0480018513.01 | 0.822693 | 2.066140e-53 | 1.742007e-50 |
| MsG0480018512.01 | MsG0480019034.01 | 0.842422 | 2.611874e-58 | 3.958534e-55 |
| MsG0480018512.01 | MsG0580024157.01 | 0.851695 | 7.506093e-61 | 1.531830e-57 |
| MsG0480018512.01 | MsG0580027261.01 | 0.829448 | 5.119134e-55 | 5.240691e-52 |
| MsG0480018512.01 | MsG0580027613.01 | 0.805901 | 1.067352e-49 | 5.714443e-47 |
| MsG0480018512.01 | MsG0680031975.01 | 0.807302 | 5.401970e-50 | 2.998283e-47 |
| MsG0480018512.01 | MsG0780039654.01 | 0.803220 | 3.868715e-49 | 1.933213e-46 |
| MsG0480018512.01 | MsG0780040669.01 | 0.831780 | 1.374492e-55 | 1.507037e-52 |
| MsG0480018512.01 | MsG0780041787.01 | 0.807216 | 5.633232e-50 | 3.119558e-47 |
| MsG0480018512.01 | MsG0880046027.01 | 0.821926 | 3.113054e-53 | 2.567897e-50 |
| MsG0380015992.01 | MsG0480018512.01 | 0.803064 | 4.167266e-49 | 2.073997e-46 |
| MsG0380016236.01 | MsG0480018512.01 | 0.809191 | 2.137871e-50 | 1.246984e-47 |
| MsG0380017195.01 | MsG0480018512.01 | 0.801643 | 8.174141e-49 | 3.923802e-46 |
| MsG0480018251.01 | MsG0480018512.01 | 0.800529 | 1.380659e-48 | 6.443525e-46 |
| MsG0280007740.01 | MsG0480018512.01 | 0.802198 | 6.285431e-49 | 3.060007e-46 |
PPI
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018512.01.T01 | MTR_4g013325 | 92.462 | 199 | 13 | 1 | 1 | 197 | 1 | 199 | 2.76e-117 | 331 |
| MsG0480018512.01.T01 | MTR_4g013350 | 78.788 | 198 | 40 | 2 | 1 | 197 | 1 | 197 | 4.79e-110 | 313 |
| MsG0480018512.01.T01 | MTR_4g013320 | 78.392 | 199 | 41 | 2 | 1 | 197 | 1 | 199 | 6.66e-108 | 308 |
| MsG0480018512.01.T01 | MTR_4g013335 | 80.328 | 183 | 32 | 3 | 16 | 197 | 17 | 196 | 6.84e-107 | 305 |
| MsG0480018512.01.T01 | MTR_4g013345 | 77.778 | 198 | 41 | 2 | 1 | 197 | 1 | 196 | 2.34e-106 | 303 |
| MsG0480018512.01.T01 | MTR_4g013330 | 74.000 | 200 | 48 | 3 | 1 | 197 | 1 | 199 | 2.44e-103 | 296 |
| MsG0480018512.01.T01 | MTR_4g013310 | 70.854 | 199 | 54 | 3 | 1 | 197 | 1 | 197 | 4.78e-95 | 275 |
| MsG0480018512.01.T01 | MTR_7g070390 | 68.254 | 189 | 57 | 2 | 11 | 197 | 5 | 192 | 5.34e-84 | 247 |
| MsG0480018512.01.T01 | MTR_4g013385 | 57.672 | 189 | 74 | 3 | 9 | 197 | 8 | 190 | 5.96e-76 | 226 |
| MsG0480018512.01.T01 | MTR_0433s0040 | 57.672 | 189 | 74 | 3 | 9 | 197 | 8 | 190 | 5.96e-76 | 226 |
| MsG0480018512.01.T01 | MTR_4g013770 | 60.947 | 169 | 64 | 2 | 30 | 197 | 24 | 191 | 5.07e-69 | 209 |
| MsG0480018512.01.T01 | MTR_1g054525 | 57.576 | 165 | 67 | 2 | 34 | 197 | 30 | 192 | 2.21e-64 | 197 |
| MsG0480018512.01.T01 | MTR_4g013355 | 52.381 | 189 | 75 | 3 | 9 | 197 | 6 | 179 | 1.36e-62 | 192 |
| MsG0480018512.01.T01 | MTR_4g073950 | 53.947 | 152 | 69 | 1 | 47 | 197 | 41 | 192 | 3.46e-57 | 179 |
| MsG0480018512.01.T01 | MTR_7g093870 | 51.829 | 164 | 74 | 2 | 39 | 197 | 30 | 193 | 6.70e-57 | 179 |
| MsG0480018512.01.T01 | MTR_7g093820 | 52.564 | 156 | 73 | 1 | 43 | 197 | 39 | 194 | 1.31e-55 | 175 |
| MsG0480018512.01.T01 | MTR_7g093850 | 45.078 | 193 | 97 | 3 | 7 | 197 | 9 | 194 | 1.74e-55 | 174 |
| MsG0480018512.01.T01 | MTR_7g093790 | 47.561 | 164 | 85 | 1 | 35 | 197 | 28 | 191 | 5.04e-55 | 173 |
| MsG0480018512.01.T01 | MTR_7g093830 | 48.171 | 164 | 84 | 1 | 35 | 197 | 30 | 193 | 2.36e-54 | 172 |
| MsG0480018512.01.T01 | MTR_1g056370 | 47.134 | 157 | 78 | 3 | 44 | 196 | 30 | 185 | 2.80e-47 | 153 |
| MsG0480018512.01.T01 | MTR_3g105640 | 45.963 | 161 | 84 | 3 | 40 | 197 | 28 | 188 | 8.35e-45 | 147 |
| MsG0480018512.01.T01 | MTR_4g078885 | 44.737 | 152 | 82 | 1 | 46 | 197 | 36 | 185 | 1.30e-43 | 144 |
| MsG0480018512.01.T01 | MTR_3g034030 | 45.395 | 152 | 81 | 1 | 46 | 197 | 36 | 185 | 2.16e-43 | 143 |
| MsG0480018512.01.T01 | MTR_3g105630 | 42.484 | 153 | 85 | 2 | 48 | 197 | 37 | 189 | 8.95e-41 | 137 |
| MsG0480018512.01.T01 | MTR_5g096120 | 40.196 | 204 | 96 | 5 | 4 | 197 | 2 | 189 | 1.85e-40 | 136 |
| MsG0480018512.01.T01 | MTR_4g122110 | 36.620 | 142 | 90 | 0 | 56 | 197 | 39 | 180 | 5.63e-27 | 101 |
| MsG0480018512.01.T01 | MTR_4g122130 | 33.514 | 185 | 113 | 2 | 17 | 197 | 2 | 180 | 5.72e-25 | 96.3 |
| MsG0480018512.01.T01 | MTR_4g013340 | 48.958 | 96 | 14 | 1 | 102 | 197 | 78 | 138 | 7.40e-24 | 92.0 |
| MsG0480018512.01.T01 | MTR_4g049550 | 28.966 | 145 | 103 | 0 | 48 | 192 | 29 | 173 | 6.25e-18 | 77.8 |
| MsG0480018512.01.T01 | MTR_4g049570 | 28.671 | 143 | 102 | 0 | 50 | 192 | 31 | 173 | 1.53e-17 | 76.6 |
| MsG0480018512.01.T01 | MTR_8g099115 | 34.286 | 140 | 83 | 3 | 49 | 180 | 34 | 172 | 1.79e-15 | 71.6 |
| MsG0480018512.01.T01 | MTR_8g099135 | 33.083 | 133 | 78 | 4 | 57 | 180 | 38 | 168 | 3.18e-13 | 65.5 |
| MsG0480018512.01.T01 | MTR_1g046800 | 40.000 | 90 | 53 | 1 | 84 | 173 | 135 | 223 | 2.63e-12 | 63.9 |
| MsG0480018512.01.T01 | MTR_1g046500 | 40.000 | 90 | 53 | 1 | 84 | 173 | 135 | 223 | 3.48e-12 | 63.5 |
| MsG0480018512.01.T01 | MTR_1g046490 | 36.667 | 90 | 56 | 1 | 84 | 173 | 121 | 209 | 4.61e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018512.01.T01 | AT1G58170 | 60.215 | 186 | 67 | 1 | 12 | 197 | 7 | 185 | 8.60e-81 | 238 |
| MsG0480018512.01.T01 | AT5G49040 | 55.851 | 188 | 82 | 1 | 11 | 197 | 4 | 191 | 4.82e-75 | 224 |
| MsG0480018512.01.T01 | AT1G55210 | 55.263 | 190 | 78 | 3 | 9 | 197 | 4 | 187 | 1.82e-73 | 220 |
| MsG0480018512.01.T01 | AT1G55210 | 55.263 | 190 | 78 | 3 | 9 | 197 | 4 | 187 | 1.82e-73 | 220 |
| MsG0480018512.01.T01 | AT3G13650 | 53.763 | 186 | 83 | 1 | 12 | 197 | 4 | 186 | 3.84e-69 | 209 |
| MsG0480018512.01.T01 | AT5G49030 | 55.172 | 174 | 77 | 1 | 11 | 183 | 4 | 177 | 1.85e-58 | 198 |
| MsG0480018512.01.T01 | AT1G65870 | 55.333 | 150 | 67 | 0 | 47 | 196 | 40 | 189 | 9.95e-58 | 180 |
| MsG0480018512.01.T01 | AT2G21100 | 49.677 | 155 | 78 | 0 | 42 | 196 | 33 | 187 | 2.01e-54 | 172 |
| MsG0480018512.01.T01 | AT2G21100 | 49.677 | 155 | 78 | 0 | 42 | 196 | 33 | 187 | 2.01e-54 | 172 |
| MsG0480018512.01.T01 | AT3G13662 | 49.714 | 175 | 81 | 4 | 11 | 184 | 4 | 172 | 2.44e-53 | 168 |
| MsG0480018512.01.T01 | AT3G13660 | 65.254 | 118 | 41 | 0 | 80 | 197 | 8 | 125 | 6.20e-53 | 166 |
| MsG0480018512.01.T01 | AT5G42500 | 48.667 | 150 | 75 | 1 | 47 | 196 | 38 | 185 | 2.61e-48 | 156 |
| MsG0480018512.01.T01 | AT5G42510 | 48.667 | 150 | 75 | 1 | 47 | 196 | 35 | 182 | 1.84e-47 | 154 |
| MsG0480018512.01.T01 | AT1G22900 | 48.667 | 150 | 75 | 1 | 47 | 196 | 46 | 193 | 2.37e-47 | 154 |
| MsG0480018512.01.T01 | AT4G38700 | 43.210 | 162 | 86 | 3 | 42 | 197 | 29 | 190 | 2.18e-43 | 144 |
| MsG0480018512.01.T01 | AT3G58090 | 50.000 | 130 | 56 | 1 | 76 | 196 | 142 | 271 | 9.20e-40 | 137 |
| MsG0480018512.01.T01 | AT2G21110 | 38.462 | 169 | 95 | 2 | 33 | 197 | 23 | 186 | 8.13e-39 | 132 |
| MsG0480018512.01.T01 | AT4G23690 | 33.766 | 154 | 89 | 4 | 30 | 179 | 25 | 169 | 1.69e-16 | 74.3 |
| MsG0480018512.01.T01 | AT1G64160 | 32.639 | 144 | 90 | 3 | 41 | 180 | 25 | 165 | 7.35e-16 | 72.4 |
| MsG0480018512.01.T01 | AT4G11190 | 32.353 | 136 | 84 | 5 | 41 | 172 | 27 | 158 | 9.90e-14 | 67.0 |
| MsG0480018512.01.T01 | AT4G11210 | 29.282 | 181 | 102 | 7 | 7 | 180 | 5 | 166 | 1.76e-13 | 66.2 |
Find 35 sgRNAs with CRISPR-Local
Find 40 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGAAGTACACTTACTATTT+TGG | 0.090168 | 4:-6008206 | MsG0480018512.01.T01:CDS |
| AGTTCTGGTCCTAAAGTTAA+AGG | 0.191161 | 4:+6008337 | None:intergenic |
| ATTGACAACCCTTTAACTTT+AGG | 0.265955 | 4:-6008346 | MsG0480018512.01.T01:CDS |
| CTAAACACAACCACTGCTTT+TGG | 0.320348 | 4:-6008382 | MsG0480018512.01.T01:CDS |
| TTTATTGAAGGAAAGTATAA+TGG | 0.324124 | 4:-6008226 | MsG0480018512.01.T01:CDS |
| GTGGTTGTGTTTAGTTTCAT+TGG | 0.341628 | 4:+6008391 | None:intergenic |
| AGATGAGATTGATTTGCTTA+TGG | 0.352366 | 4:-6008263 | MsG0480018512.01.T01:CDS |
| CTTAATAATTTGCGGTCTAT+AGG | 0.353141 | 4:+6008505 | None:intergenic |
| GAACTGAGTTCTAAACTTGT+TGG | 0.378339 | 4:-6008319 | MsG0480018512.01.T01:CDS |
| CATTGGTTTGATATCAAAAC+CGG | 0.379656 | 4:-6008088 | MsG0480018512.01.T01:CDS |
| AAGTGATGGTGTTGCAAGAT+AGG | 0.403929 | 4:+6008575 | None:intergenic |
| TCTTTAGGCTTAATAATTTG+CGG | 0.414614 | 4:+6008497 | None:intergenic |
| GTTCTGGTCCTAAAGTTAAA+GGG | 0.426776 | 4:+6008338 | None:intergenic |
| ACAAGTTTAGAACTCAGTTC+TGG | 0.427865 | 4:+6008322 | None:intergenic |
| ATGCTGAAGCTAATACTCAT+TGG | 0.445682 | 4:-6008105 | MsG0480018512.01.T01:CDS |
| GTGTTTAGTTTCATTGGTGG+TGG | 0.448998 | 4:+6008397 | None:intergenic |
| GGAACAACTGCAACTGAAGT+AGG | 0.473877 | 4:+6008418 | None:intergenic |
| AGAACAAAGTGATGAAGTGT+TGG | 0.478622 | 4:+6008608 | None:intergenic |
| GAACAAAGTGATGAAGTGTT+GGG | 0.498072 | 4:+6008609 | None:intergenic |
| TAAGTCATTTCAGATTCTAC+TGG | 0.503837 | 4:-6008465 | MsG0480018512.01.T01:CDS |
| CAAATTATTAAGCCTAAAGA+AGG | 0.508677 | 4:-6008494 | MsG0480018512.01.T01:CDS |
| AAACTTGTTGGAAAAGCTCA+AGG | 0.509980 | 4:-6008307 | MsG0480018512.01.T01:CDS |
| TGGTGTTGCAAGATAGGAGA+AGG | 0.539243 | 4:+6008581 | None:intergenic |
| ATGCCTGTGATTGGTGGCAG+TGG | 0.540114 | 4:-6008151 | MsG0480018512.01.T01:CDS |
| GTTGTGTTTAGTTTCATTGG+TGG | 0.544359 | 4:+6008394 | None:intergenic |
| ATACTCAACAATAGCATCCC+CGG | 0.565003 | 4:+6008069 | None:intergenic |
| GTTAGAGAGATGCCTGTGAT+TGG | 0.567283 | 4:-6008160 | MsG0480018512.01.T01:CDS |
| GAACAACTGCAACTGAAGTA+GGG | 0.596771 | 4:+6008419 | None:intergenic |
| AATCCACTGCCACCAATCAC+AGG | 0.619144 | 4:+6008148 | None:intergenic |
| AGAGAGATGCCTGTGATTGG+TGG | 0.622674 | 4:-6008157 | MsG0480018512.01.T01:CDS |
| TGATGATGATGTTAAAGTGA+TGG | 0.638584 | 4:+6008561 | None:intergenic |
| TACTGGCACGACATAGTGAG+TGG | 0.639000 | 4:-6008448 | MsG0480018512.01.T01:CDS |
| ATTGGTTTGATATCAAAACC+GGG | 0.644981 | 4:-6008087 | MsG0480018512.01.T01:CDS |
| GTTGAGTAAACCAAAAGCAG+TGG | 0.663208 | 4:+6008372 | None:intergenic |
| TTGGTTTGATATCAAAACCG+GGG | 0.681345 | 4:-6008086 | MsG0480018512.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGAATTTTGCTTTTATTGA+AGG | - | Chr4:6008423-6008442 | MsG0480018512.01.T01:CDS | 20.0% |
| !!! | TTTATTGAAGGAAAGTATAA+TGG | - | Chr4:6008435-6008454 | MsG0480018512.01.T01:CDS | 20.0% |
| ! | CAAATTATTAAGCCTAAAGA+AGG | - | Chr4:6008167-6008186 | MsG0480018512.01.T01:CDS | 25.0% |
| ! | TCTTTAGGCTTAATAATTTG+CGG | + | Chr4:6008167-6008186 | None:intergenic | 25.0% |
| TAAGTCATTTCAGATTCTAC+TGG | - | Chr4:6008196-6008215 | MsG0480018512.01.T01:CDS | 30.0% | |
| ! | ATTGACAACCCTTTAACTTT+AGG | - | Chr4:6008315-6008334 | MsG0480018512.01.T01:CDS | 30.0% |
| ! | CTTAATAATTTGCGGTCTAT+AGG | + | Chr4:6008159-6008178 | None:intergenic | 30.0% |
| ! | TGATGATGATGTTAAAGTGA+TGG | + | Chr4:6008103-6008122 | None:intergenic | 30.0% |
| !! | AGATGAGATTGATTTGCTTA+TGG | - | Chr4:6008398-6008417 | MsG0480018512.01.T01:CDS | 30.0% |
| !! | ATTGGTTTGATATCAAAACC+GGG | - | Chr4:6008574-6008593 | MsG0480018512.01.T01:CDS | 30.0% |
| !! | CATTGGTTTGATATCAAAAC+CGG | - | Chr4:6008573-6008592 | MsG0480018512.01.T01:CDS | 30.0% |
| !! | GACTTAGTTTTTCCTTCTTT+AGG | + | Chr4:6008182-6008201 | None:intergenic | 30.0% |
| !! | GGAAGTACACTTACTATTTT+GGG | - | Chr4:6008456-6008475 | MsG0480018512.01.T01:CDS | 30.0% |
| !! | TGGAAGTACACTTACTATTT+TGG | - | Chr4:6008455-6008474 | MsG0480018512.01.T01:CDS | 30.0% |
| AGAACAAAGTGATGAAGTGT+TGG | + | Chr4:6008056-6008075 | None:intergenic | 35.0% | |
| ATGCTGAAGCTAATACTCAT+TGG | - | Chr4:6008556-6008575 | MsG0480018512.01.T01:CDS | 35.0% | |
| GTTCTGGTCCTAAAGTTAAA+GGG | + | Chr4:6008326-6008345 | None:intergenic | 35.0% | |
| ! | ACAAGTTTAGAACTCAGTTC+TGG | + | Chr4:6008342-6008361 | None:intergenic | 35.0% |
| ! | AGTTCTGGTCCTAAAGTTAA+AGG | + | Chr4:6008327-6008346 | None:intergenic | 35.0% |
| ! | GAACAAAGTGATGAAGTGTT+GGG | + | Chr4:6008055-6008074 | None:intergenic | 35.0% |
| ! | GTGGTTGTGTTTAGTTTCAT+TGG | + | Chr4:6008273-6008292 | None:intergenic | 35.0% |
| ! | GTTGTGTTTAGTTTCATTGG+TGG | + | Chr4:6008270-6008289 | None:intergenic | 35.0% |
| ! | TTGGTTTGATATCAAAACCG+GGG | - | Chr4:6008575-6008594 | MsG0480018512.01.T01:CDS | 35.0% |
| !! | AAACTTGTTGGAAAAGCTCA+AGG | - | Chr4:6008354-6008373 | MsG0480018512.01.T01:CDS | 35.0% |
| !! | GAACTGAGTTCTAAACTTGT+TGG | - | Chr4:6008342-6008361 | MsG0480018512.01.T01:CDS | 35.0% |
| !! | GTACACTTACTATTTTGGGA+AGG | - | Chr4:6008460-6008479 | MsG0480018512.01.T01:CDS | 35.0% |
| !!! | GGATTTTTCAGATTTGCTAG+AGG | - | Chr4:6008531-6008550 | MsG0480018512.01.T01:CDS | 35.0% |
| ATACTCAACAATAGCATCCC+CGG | + | Chr4:6008595-6008614 | None:intergenic | 40.0% | |
| GAACAACTGCAACTGAAGTA+GGG | + | Chr4:6008245-6008264 | None:intergenic | 40.0% | |
| GTTGAGTAAACCAAAAGCAG+TGG | + | Chr4:6008292-6008311 | None:intergenic | 40.0% | |
| ! | CTAAACACAACCACTGCTTT+TGG | - | Chr4:6008279-6008298 | MsG0480018512.01.T01:CDS | 40.0% |
| ! | GTGTTTAGTTTCATTGGTGG+TGG | + | Chr4:6008267-6008286 | None:intergenic | 40.0% |
| !! | AAGTGATGGTGTTGCAAGAT+AGG | + | Chr4:6008089-6008108 | None:intergenic | 40.0% |
| GGAACAACTGCAACTGAAGT+AGG | + | Chr4:6008246-6008265 | None:intergenic | 45.0% | |
| GTTAGAGAGATGCCTGTGAT+TGG | - | Chr4:6008501-6008520 | MsG0480018512.01.T01:CDS | 45.0% | |
| !! | TGGTGTTGCAAGATAGGAGA+AGG | + | Chr4:6008083-6008102 | None:intergenic | 45.0% |
| AATCCACTGCCACCAATCAC+AGG | + | Chr4:6008516-6008535 | None:intergenic | 50.0% | |
| AGAGAGATGCCTGTGATTGG+TGG | - | Chr4:6008504-6008523 | MsG0480018512.01.T01:CDS | 50.0% | |
| TACTGGCACGACATAGTGAG+TGG | - | Chr4:6008213-6008232 | MsG0480018512.01.T01:CDS | 50.0% | |
| ! | ATGCCTGTGATTGGTGGCAG+TGG | - | Chr4:6008510-6008529 | MsG0480018512.01.T01:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 6008045 | 6008638 | 6008045 | ID=MsG0480018512.01;Name=MsG0480018512.01 |
| Chr4 | mRNA | 6008045 | 6008638 | 6008045 | ID=MsG0480018512.01.T01;Parent=MsG0480018512.01;Name=MsG0480018512.01.T01;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|1|1|0|197 |
| Chr4 | exon | 6008045 | 6008638 | 6008045 | ID=MsG0480018512.01.T01:exon:2133;Parent=MsG0480018512.01.T01 |
| Chr4 | CDS | 6008045 | 6008638 | 6008045 | ID=MsG0480018512.01.T01:cds;Parent=MsG0480018512.01.T01 |
| Gene Sequence |
| Protein sequence |
