Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780040705.01.T01 | XP_013449841.2 | 97.656 | 128 | 3 | 0 | 1 | 128 | 1 | 128 | 1.89E-66 | 221 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780040705.01.T01 | P26569 | 48.249 | 257 | 89 | 7 | 57 | 312 | 57 | 270 | 4.99E-32 | 123 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780040705.01.T01 | A0A396H5U8 | 97.656 | 128 | 3 | 0 | 1 | 128 | 1 | 128 | 9.03e-67 | 221 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080048809.01 | MsG0780040705.01 | 0.843169 | 1.653321e-58 | 2.564597e-55 |
MsG0180000280.01 | MsG0780040705.01 | 0.800012 | 1.759479e-48 | 8.104352e-46 |
MsG0180003118.01 | MsG0780040705.01 | 0.810948 | 8.941942e-51 | 5.464520e-48 |
MsG0180004085.01 | MsG0780040705.01 | -0.821759 | 3.403333e-53 | 2.793877e-50 |
MsG0180004599.01 | MsG0780040705.01 | -0.803006 | 4.282653e-49 | 2.128314e-46 |
MsG0180005354.01 | MsG0780040705.01 | -0.826841 | 2.173949e-54 | 2.062369e-51 |
MsG0780040705.01 | MsG0880042743.01 | -0.815165 | 1.063306e-51 | 7.275749e-49 |
MsG0380011895.01 | MsG0780040705.01 | -0.807581 | 4.712502e-50 | 2.634404e-47 |
MsG0380012279.01 | MsG0780040705.01 | 0.809657 | 1.697944e-50 | 1.002776e-47 |
MsG0380014551.01 | MsG0780040705.01 | 0.814259 | 1.687496e-51 | 1.126817e-48 |
MsG0380014727.01 | MsG0780040705.01 | -0.801301 | 9.607035e-49 | 4.572129e-46 |
MsG0380014866.01 | MsG0780040705.01 | -0.817053 | 4.026287e-52 | 2.901434e-49 |
MsG0680031377.01 | MsG0780040705.01 | 0.819202 | 1.314172e-52 | 1.004668e-49 |
MsG0680032058.01 | MsG0780040705.01 | -0.839661 | 1.386514e-57 | 1.927749e-54 |
MsG0480022392.01 | MsG0780040705.01 | 0.810780 | 9.720498e-51 | 5.913301e-48 |
MsG0480022393.01 | MsG0780040705.01 | 0.804377 | 2.223935e-49 | 1.144883e-46 |
MsG0480023937.01 | MsG0780040705.01 | -0.830061 | 3.629305e-55 | 3.782180e-52 |
MsG0380016182.01 | MsG0780040705.01 | -0.804985 | 1.660786e-49 | 8.684853e-47 |
MsG0380017178.01 | MsG0780040705.01 | 0.820384 | 7.058201e-53 | 5.576725e-50 |
MsG0380017265.01 | MsG0780040705.01 | 0.820030 | 8.506953e-53 | 6.655880e-50 |
MsG0280007864.01 | MsG0780040705.01 | 0.809893 | 1.511035e-50 | 8.978866e-48 |
MsG0780038833.01 | MsG0780040705.01 | -0.814870 | 1.236058e-51 | 8.390637e-49 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780040705.01.T01 | MTR_7g096280 | 97.656 | 128 | 3 | 0 | 1 | 128 | 1 | 128 | 3.46e-70 | 220 |
MsG0780040705.01.T01 | MTR_1g070390 | 59.848 | 132 | 34 | 6 | 12 | 128 | 2 | 129 | 6.87e-33 | 122 |
MsG0780040705.01.T01 | MTR_1g070435 | 58.333 | 132 | 36 | 5 | 12 | 128 | 2 | 129 | 4.29e-32 | 120 |
MsG0780040705.01.T01 | MTR_1g070440 | 51.196 | 209 | 64 | 4 | 61 | 269 | 9 | 179 | 1.41e-27 | 107 |
MsG0780040705.01.T01 | MTR_1g080700 | 64.706 | 68 | 24 | 0 | 61 | 128 | 22 | 89 | 5.91e-27 | 104 |
MsG0780040705.01.T01 | MTR_5g021730 | 57.143 | 91 | 32 | 3 | 45 | 128 | 12 | 102 | 1.10e-21 | 90.1 |
MsG0780040705.01.T01 | MTR_8g077160 | 53.191 | 94 | 24 | 7 | 12 | 90 | 2 | 90 | 3.46e-15 | 70.5 |
MsG0780040705.01.T01 | MTR_8g018410 | 44.086 | 93 | 48 | 3 | 63 | 152 | 120 | 211 | 1.45e-12 | 67.4 |
MsG0780040705.01.T01 | MTR_2g099610 | 37.662 | 77 | 45 | 2 | 60 | 134 | 137 | 212 | 5.00e-11 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780040705.01.T01 | AT2G30620 | 65.882 | 85 | 29 | 0 | 57 | 141 | 57 | 141 | 6.46e-34 | 123 |
MsG0780040705.01.T01 | AT2G30620 | 48.249 | 257 | 89 | 7 | 57 | 312 | 57 | 270 | 5.09e-33 | 123 |
MsG0780040705.01.T01 | AT2G18050 | 57.471 | 87 | 33 | 2 | 43 | 128 | 8 | 91 | 1.23e-21 | 90.1 |
MsG0780040705.01.T01 | AT2G18050 | 61.290 | 62 | 23 | 1 | 68 | 128 | 1 | 62 | 1.15e-16 | 75.9 |
Find 134 sgRNAs with CRISPR-Local
Find 163 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTTCTTGGAAGCGGGCTTTC+GGG | 0.152994 | 7:-81429766 | None:intergenic |
ATTTCAATTTAAAAGTTTAA+TGG | 0.188892 | 7:-81430811 | None:intergenic |
ATCAAGAAGCTCGTTGCTTC+TGG | 0.208493 | 7:+81430061 | MsG0780040705.01.T01:CDS |
AGCCTTGGCAGGAGCAGCTT+TGG | 0.230291 | 7:-81430263 | None:intergenic |
CTTTGTTATGCGGTGTAGTT+TGG | 0.247957 | 7:+81430744 | MsG0780040705.01.T01:three_prime_UTR |
CAAGGAAGGCTCCAACAAAA+AGG | 0.248493 | 7:+81430647 | MsG0780040705.01.T01:CDS |
GAAGCGGGCTTTCGGGGTTT+TGG | 0.250284 | 7:-81429759 | None:intergenic |
TTCGCCTTGGGCTTCGCAGC+AGG | 0.258404 | 7:-81430361 | None:intergenic |
GGTTCTTGGAAGCGGGCTTT+CGG | 0.259296 | 7:-81429767 | None:intergenic |
GCAGGCTTTGCCTTGGCGGC+AGG | 0.260442 | 7:-81430307 | None:intergenic |
TTTCGCCTTGGGCTTGGGCT+TGG | 0.261568 | 7:-81430164 | None:intergenic |
TGAAAACGAGAAAGAGAAAA+TGG | 0.275926 | 7:-81429575 | None:intergenic |
GCGGCAGCGGGCTTCTTAGC+TGG | 0.280360 | 7:-81430136 | None:intergenic |
TTCGCCTTGGGCTTGGGCTT+GGG | 0.281616 | 7:-81430163 | None:intergenic |
TTTGTTGGAGCCTTCCTTGC+TGG | 0.288920 | 7:-81430643 | None:intergenic |
GCAGGCTTCGCCTTTGCAGC+TGG | 0.291738 | 7:-81430343 | None:intergenic |
GCTGGCTTAGCCTTGGCAGC+AGG | 0.294649 | 7:-81430325 | None:intergenic |
AGAGAAAATGGATATGATTA+TGG | 0.304238 | 7:-81429563 | None:intergenic |
AGGTGCTTTCGCCTTGGGCT+TGG | 0.306172 | 7:-81430170 | None:intergenic |
GGTGCTTTCGCCTTGGGCTT+GGG | 0.326221 | 7:-81430169 | None:intergenic |
GAACTTCAAGAAGATTCTTC+TGG | 0.329050 | 7:+81430033 | MsG0780040705.01.T01:CDS |
CTTGGCAGCAGGCTTTGCCT+TGG | 0.330224 | 7:-81430314 | None:intergenic |
CTTTGCAGCTGGCTTAGCCT+TGG | 0.335758 | 7:-81430332 | None:intergenic |
GCGGGTTTCGCCTTGGCAGC+TGG | 0.337646 | 7:-81430451 | None:intergenic |
GCCTTAGCAGGCCTCGCAGC+TGG | 0.341185 | 7:-81430487 | None:intergenic |
GGCTACAGGTGCTTTCGCCT+TGG | 0.344001 | 7:-81430176 | None:intergenic |
GCTACAGGTGCTTTCGCCTT+GGG | 0.358145 | 7:-81430175 | None:intergenic |
TTGGCCTGAGCCTTGGCTAC+AGG | 0.370054 | 7:-81430190 | None:intergenic |
AGGGTGAGTGCGAGGGTTCT+TGG | 0.371985 | 7:-81429781 | None:intergenic |
GCAACAGGAGCCTTCGCCTT+GGG | 0.381616 | 7:-81430373 | None:intergenic |
GGCAGCAGGCTTTGCCTTGG+CGG | 0.382016 | 7:-81430311 | None:intergenic |
TGGAGCCTTGGCCTGAGCCT+TGG | 0.388550 | 7:-81430197 | None:intergenic |
GCTTTGGCCTTAGCCTTAGC+AGG | 0.399563 | 7:-81430247 | None:intergenic |
CAATTTCAATTTCAACCCTA+TGG | 0.400260 | 7:+81429596 | MsG0780040705.01.T01:exon |
GCTGGCTTCGCCTTCACAGC+GGG | 0.401014 | 7:-81430469 | None:intergenic |
GGCTCCAGCTGCTAAGTCTA+AGG | 0.402522 | 7:+81430213 | MsG0780040705.01.T01:CDS |
GCTGGTGCAGCCTTCTTCAC+TGG | 0.405093 | 7:-81430625 | None:intergenic |
GCAGGCTTAGCCTTAGCAGC+TGG | 0.405094 | 7:-81430289 | None:intergenic |
GTTGGATTATACCTCTTCAT+AGG | 0.406087 | 7:-81429805 | None:intergenic |
GCTGGCTTAGCCTTAGCCGC+GGG | 0.407544 | 7:-81430433 | None:intergenic |
CAAGGCAAAGCCTGCTGCCA+AGG | 0.412841 | 7:+81430315 | MsG0780040705.01.T01:CDS |
TTTGTTATGCGGTGTAGTTT+GGG | 0.414444 | 7:+81430745 | MsG0780040705.01.T01:three_prime_UTR |
TGAACTTTGCCAAAGCATAC+TGG | 0.416902 | 7:-81429982 | None:intergenic |
ATCATAAATGAAAAGCTAGA+AGG | 0.420441 | 7:+81430866 | MsG0780040705.01.T01:three_prime_UTR |
GCCGGTGCAGCCTTCTTCAC+TGG | 0.420909 | 7:-81430586 | None:intergenic |
TCAAGAAGCTCGTTGCTTCT+GGG | 0.421137 | 7:+81430062 | MsG0780040705.01.T01:CDS |
TGCTTCTGGGAAGCTTGTTA+AGG | 0.422591 | 7:+81430075 | MsG0780040705.01.T01:CDS |
ACAGCATTGGCCTTAGCAAC+AGG | 0.429638 | 7:-81430388 | None:intergenic |
GGAAGAGGGTCGACGGCGGC+CGG | 0.429971 | 7:-81429675 | None:intergenic |
CTTAGCAGCTGGCTTAGCCT+TGG | 0.434577 | 7:-81430278 | None:intergenic |
GAAGGCTGCACCGGCGAAGA+AGG | 0.439472 | 7:+81430594 | MsG0780040705.01.T01:CDS |
GCAGCTGGCTTAGCCTTGGC+AGG | 0.439834 | 7:-81430274 | None:intergenic |
AGAATCTTCTTGAAGTTCGC+TGG | 0.441711 | 7:-81430028 | None:intergenic |
GCCGCAGCAGCTCTCTTCCC+AGG | 0.443735 | 7:-81430535 | None:intergenic |
GCCAGCTGCGAGGCCTGCTA+AGG | 0.453992 | 7:+81430486 | MsG0780040705.01.T01:CDS |
GTAGCAGCTTTCTTCACAGC+TGG | 0.458621 | 7:-81430562 | None:intergenic |
GGCTTTGCCTTAGCAGCTAC+AGG | 0.458880 | 7:-81430412 | None:intergenic |
TTCGCCTTAGACTTAGCAGC+TGG | 0.461234 | 7:-81430217 | None:intergenic |
TTGCTCGACGGCGGAGACGG+TGG | 0.463485 | 7:-81429637 | None:intergenic |
AGACTTAGCAGCTGGAGCCT+TGG | 0.464716 | 7:-81430209 | None:intergenic |
CGGTTCAAGCCAGTATGCTT+TGG | 0.465800 | 7:+81429973 | MsG0780040705.01.T01:CDS |
GGGTAGGAAGTGAAAAGGGG+AGG | 0.467156 | 7:+81430672 | MsG0780040705.01.T01:exon |
GAAGTTCTTGAAGCCTTAGC+AGG | 0.468954 | 7:-81430499 | None:intergenic |
ACAGATGTTTCAAAAGAAGA+AGG | 0.471257 | 7:+81430774 | MsG0780040705.01.T01:three_prime_UTR |
GCTGGAGCAGCAGACTTAGC+TGG | 0.472122 | 7:-81430118 | None:intergenic |
TAAGGCTAAGCCAGCTGCCA+AGG | 0.472493 | 7:+81430441 | MsG0780040705.01.T01:CDS |
GGGTTGCTCGACGGCGGAGA+CGG | 0.472845 | 7:-81429640 | None:intergenic |
AGCAACAGGAGCCTTCGCCT+TGG | 0.474423 | 7:-81430374 | None:intergenic |
CAAGGCTAAGCCAGCTGCAA+AGG | 0.476286 | 7:+81430333 | MsG0780040705.01.T01:CDS |
AGTGCGAGGGTTCTTGGAAG+CGG | 0.476294 | 7:-81429775 | None:intergenic |
TGCTGCGAAGCCCAAGGCGA+AGG | 0.477731 | 7:+81430363 | MsG0780040705.01.T01:CDS |
GGCGTAGCAGCCTTCTTCGC+CGG | 0.478854 | 7:-81430604 | None:intergenic |
CTTCACAGCGGGTTTCGCCT+TGG | 0.479275 | 7:-81430458 | None:intergenic |
TGCTCGACGGCGGAGACGGT+GGG | 0.483411 | 7:-81429636 | None:intergenic |
AGCTGCTACGCCAGTGAAGA+AGG | 0.484447 | 7:+81430576 | MsG0780040705.01.T01:CDS |
GGCTGCTACGCCAGTGAAGA+AGG | 0.484447 | 7:+81430615 | MsG0780040705.01.T01:CDS |
CAAGGCTAAGCCAGCTGCTA+AGG | 0.487877 | 7:+81430279 | MsG0780040705.01.T01:CDS |
TGCTGTACCTGTAGCTGCTA+AGG | 0.495059 | 7:+81430405 | MsG0780040705.01.T01:CDS |
AGCACCTGTAGCCAAGGCTC+AGG | 0.495242 | 7:+81430186 | MsG0780040705.01.T01:CDS |
GTGCGAGGGTTCTTGGAAGC+GGG | 0.496962 | 7:-81429774 | None:intergenic |
GCGGCCGGCTCCTCCACAAT+GGG | 0.497053 | 7:-81429660 | None:intergenic |
TAAGGCAAAGCCCGCGGCTA+AGG | 0.500278 | 7:+81430423 | MsG0780040705.01.T01:CDS |
GATTATACCTCTTCATAGGT+AGG | 0.501241 | 7:-81429801 | None:intergenic |
GGCGAAGGCTCCTGTTGCTA+AGG | 0.503889 | 7:+81430378 | MsG0780040705.01.T01:CDS |
GCAACCCATTGTGGAGGAGC+CGG | 0.506752 | 7:+81429656 | MsG0780040705.01.T01:CDS |
GGCGGCCGGCTCCTCCACAA+TGG | 0.507570 | 7:-81429661 | None:intergenic |
AGCTGGCTTAGCCTTAGCCG+CGG | 0.509277 | 7:-81430434 | None:intergenic |
AAAACCCAAGCCCAAGCCCA+AGG | 0.512143 | 7:+81430159 | MsG0780040705.01.T01:CDS |
AGCTGCTCCTGCTAAGGCTA+AGG | 0.513069 | 7:+81430240 | MsG0780040705.01.T01:CDS |
GTAGGAAGTGAAAAGGGGAG+GGG | 0.517233 | 7:+81430674 | MsG0780040705.01.T01:exon |
CAAGGCGAAACCCGCTGTGA+AGG | 0.517689 | 7:+81430459 | MsG0780040705.01.T01:CDS |
CTTGGCGGCAGTGGGCTCGT+CGG | 0.518772 | 7:-81429715 | None:intergenic |
TTCTTGGAAGCGGGCTTTCG+GGG | 0.519746 | 7:-81429765 | None:intergenic |
GGACGCGATTGTGACTTTGA+AGG | 0.521125 | 7:+81429943 | MsG0780040705.01.T01:CDS |
TCATTGACGACAGGTGGAAG+AGG | 0.523503 | 7:-81429690 | None:intergenic |
GAAGGCTGCACCAGCAAGGA+AGG | 0.525244 | 7:+81430633 | MsG0780040705.01.T01:CDS |
GCCAGTGAAGAAGGCTGCAC+CGG | 0.525579 | 7:+81430585 | MsG0780040705.01.T01:CDS |
TAAGGCTAAGCCTGCCGCCA+AGG | 0.529628 | 7:+81430297 | MsG0780040705.01.T01:CDS |
TGGGAAGCTTGTTAAGGTCA+AGG | 0.534548 | 7:+81430081 | MsG0780040705.01.T01:CDS |
TGTAGCCAAGGCTCAGGCCA+AGG | 0.535590 | 7:+81430192 | MsG0780040705.01.T01:CDS |
GAAGCCTGCTGCGAAGCCCA+AGG | 0.535967 | 7:+81430357 | MsG0780040705.01.T01:CDS |
CGCCGTCGAGCAACCCATTG+TGG | 0.536582 | 7:+81429647 | MsG0780040705.01.T01:CDS |
TCTTCAACAGAGGAAGCCAT+AGG | 0.538140 | 7:-81429612 | None:intergenic |
GACGGTGGGTTCTTCAACAG+AGG | 0.542415 | 7:-81429622 | None:intergenic |
GGCGAAAGCTGCTCCTGCTA+AGG | 0.548061 | 7:+81430234 | MsG0780040705.01.T01:CDS |
GGGAAGCTTGTTAAGGTCAA+GGG | 0.548796 | 7:+81430082 | MsG0780040705.01.T01:CDS |
GGTAGGAAGTGAAAAGGGGA+GGG | 0.558354 | 7:+81430673 | MsG0780040705.01.T01:exon |
GGCCAAAGCTGCTCCTGCCA+AGG | 0.561780 | 7:+81430261 | MsG0780040705.01.T01:CDS |
TCATAGGTAGGGTGAGTGCG+AGG | 0.561820 | 7:-81429789 | None:intergenic |
ATTATACCTCTTCATAGGTA+GGG | 0.564781 | 7:-81429800 | None:intergenic |
AAATACAAAGCTAGAAAACC+TGG | 0.565678 | 7:-81430837 | None:intergenic |
GGCGAAAGCACCTGTAGCCA+AGG | 0.572063 | 7:+81430180 | MsG0780040705.01.T01:CDS |
AGAAAAGCTAGTGTTTGTAG+TGG | 0.575872 | 7:+81430702 | MsG0780040705.01.T01:three_prime_UTR |
CACTCACCCTACCTATGAAG+AGG | 0.581938 | 7:+81429794 | MsG0780040705.01.T01:CDS |
GACAGGTGGAAGAGGGTCGA+CGG | 0.585350 | 7:-81429682 | None:intergenic |
CTCCACAATGGGTTGCTCGA+CGG | 0.587768 | 7:-81429649 | None:intergenic |
TCGTCGGATTCATTGACGAC+AGG | 0.595029 | 7:-81429699 | None:intergenic |
CTTCAACAGAGGAAGCCATA+GGG | 0.598940 | 7:-81429611 | None:intergenic |
GTGACTTTGAAGGAGAAGAA+CGG | 0.599741 | 7:+81429953 | MsG0780040705.01.T01:CDS |
TCGGATTCATTGACGACAGG+TGG | 0.600220 | 7:-81429696 | None:intergenic |
CACAATGGGTTGCTCGACGG+CGG | 0.600492 | 7:-81429646 | None:intergenic |
ACTTCGACAAGGACATCACC+TGG | 0.600910 | 7:+81430517 | MsG0780040705.01.T01:CDS |
CATAGGTAGGGTGAGTGCGA+GGG | 0.601423 | 7:-81429788 | None:intergenic |
ACCTGGGAAGAGAGCTGCTG+CGG | 0.603536 | 7:+81430534 | MsG0780040705.01.T01:CDS |
AGCAGCTACAGGTACAGCAT+TGG | 0.604180 | 7:-81430401 | None:intergenic |
TGAAGAAGGCTGCACCAGCA+AGG | 0.617052 | 7:+81430629 | MsG0780040705.01.T01:CDS |
AGCTGCTAAGGCAAAGCCCG+CGG | 0.620978 | 7:+81430417 | MsG0780040705.01.T01:CDS |
CATTGACGACAGGTGGAAGA+GGG | 0.625716 | 7:-81429689 | None:intergenic |
TGAAGGCGAAGCCAGCTGCG+AGG | 0.633012 | 7:+81430476 | MsG0780040705.01.T01:CDS |
CGTCGAGCAACCCATTGTGG+AGG | 0.646163 | 7:+81429650 | MsG0780040705.01.T01:CDS |
AGCTGGCTTCGCCTTCACAG+CGG | 0.651707 | 7:-81430470 | None:intergenic |
AGGTGGAAGAGGGTCGACGG+CGG | 0.677080 | 7:-81429679 | None:intergenic |
CTTCGACAAGGACATCACCT+GGG | 0.693700 | 7:+81430518 | MsG0780040705.01.T01:CDS |
AGGCTTCAAGAACTTCGACA+AGG | 0.719954 | 7:+81430506 | MsG0780040705.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTTCAATTTAAAAGTTTAA+TGG | - | Chr7:81430814-81430833 | None:intergenic | 10.0% |
!!! | GTAAATTTTTCTTTGTTATG+CGG | + | Chr7:81430734-81430753 | MsG0780040705.01.T01:three_prime_UTR | 20.0% |
!!! | TTTTTATTTTTTGTTGCAGA+TGG | + | Chr7:81429916-81429935 | MsG0780040705.01.T01:intron | 20.0% |
! | AGAGAAAATGGATATGATTA+TGG | - | Chr7:81429566-81429585 | None:intergenic | 25.0% |
! | ATCATAAATGAAAAGCTAGA+AGG | + | Chr7:81430866-81430885 | MsG0780040705.01.T01:three_prime_UTR | 25.0% |
!! | CTTTTAAATTGAAATTGTCC+AGG | + | Chr7:81430819-81430838 | MsG0780040705.01.T01:three_prime_UTR | 25.0% |
AAATACAAAGCTAGAAAACC+TGG | - | Chr7:81430840-81430859 | None:intergenic | 30.0% | |
ACAGATGTTTCAAAAGAAGA+AGG | + | Chr7:81430774-81430793 | MsG0780040705.01.T01:three_prime_UTR | 30.0% | |
ATTATACCTCTTCATAGGTA+GGG | - | Chr7:81429803-81429822 | None:intergenic | 30.0% | |
CAATTTCAATTTCAACCCTA+TGG | + | Chr7:81429596-81429615 | MsG0780040705.01.T01:exon | 30.0% | |
TGAAAACGAGAAAGAGAAAA+TGG | - | Chr7:81429578-81429597 | None:intergenic | 30.0% | |
AGAAAAGCTAGTGTTTGTAG+TGG | + | Chr7:81430702-81430721 | MsG0780040705.01.T01:three_prime_UTR | 35.0% | |
GAACTTCAAGAAGATTCTTC+TGG | + | Chr7:81430033-81430052 | MsG0780040705.01.T01:CDS | 35.0% | |
GATTATACCTCTTCATAGGT+AGG | - | Chr7:81429804-81429823 | None:intergenic | 35.0% | |
GTTGGATTATACCTCTTCAT+AGG | - | Chr7:81429808-81429827 | None:intergenic | 35.0% | |
! | CGAAGATTGAGCGAAATTTT+TGG | - | Chr7:81429538-81429557 | None:intergenic | 35.0% |
! | TTTGTTATGCGGTGTAGTTT+GGG | + | Chr7:81430745-81430764 | MsG0780040705.01.T01:three_prime_UTR | 35.0% |
!! | GTAATTGTGTTGAGTTGAGT+TGG | - | Chr7:81429826-81429845 | None:intergenic | 35.0% |
!!! | TTTTTTGTTGCAGATGGTGA+CGG | + | Chr7:81429922-81429941 | MsG0780040705.01.T01:intron | 35.0% |
AAGGAAGGCTCCAACAAAAA+GGG | + | Chr7:81430648-81430667 | MsG0780040705.01.T01:CDS | 40.0% | |
AGAATCTTCTTGAAGTTCGC+TGG | - | Chr7:81430031-81430050 | None:intergenic | 40.0% | |
TGAACTTTGCCAAAGCATAC+TGG | - | Chr7:81429985-81430004 | None:intergenic | 40.0% | |
! | CTTTGTTATGCGGTGTAGTT+TGG | + | Chr7:81430744-81430763 | MsG0780040705.01.T01:three_prime_UTR | 40.0% |
! | GTGACTTTGAAGGAGAAGAA+CGG | + | Chr7:81429953-81429972 | MsG0780040705.01.T01:CDS | 40.0% |
AGGAAGGCTCCAACAAAAAG+GGG | + | Chr7:81430649-81430668 | MsG0780040705.01.T01:CDS | 45.0% | |
AGGCTTCAAGAACTTCGACA+AGG | + | Chr7:81430506-81430525 | MsG0780040705.01.T01:CDS | 45.0% | |
ATCAAGAAGCTCGTTGCTTC+TGG | + | Chr7:81430061-81430080 | MsG0780040705.01.T01:CDS | 45.0% | |
CAAGGAAGGCTCCAACAAAA+AGG | + | Chr7:81430647-81430666 | MsG0780040705.01.T01:CDS | 45.0% | |
CTTCAACAGAGGAAGCCATA+GGG | - | Chr7:81429614-81429633 | None:intergenic | 45.0% | |
GAAGTTCTTGAAGCCTTAGC+AGG | - | Chr7:81430502-81430521 | None:intergenic | 45.0% | |
TCAAGAAGCTCGTTGCTTCT+GGG | + | Chr7:81430062-81430081 | MsG0780040705.01.T01:CDS | 45.0% | |
TCTTCAACAGAGGAAGCCAT+AGG | - | Chr7:81429615-81429634 | None:intergenic | 45.0% | |
!! | GGGAAGCTTGTTAAGGTCAA+GGG | + | Chr7:81430082-81430101 | MsG0780040705.01.T01:CDS | 45.0% |
!! | TGCTTCTGGGAAGCTTGTTA+AGG | + | Chr7:81430075-81430094 | MsG0780040705.01.T01:CDS | 45.0% |
!! | TGGGAAGCTTGTTAAGGTCA+AGG | + | Chr7:81430081-81430100 | MsG0780040705.01.T01:CDS | 45.0% |
!!! | TTTCGGGGTTTTGGCTCTTT+GGG | - | Chr7:81429753-81429772 | None:intergenic | 45.0% |
AAGGCTCCAACAAAAAGGGG+GGG | + | Chr7:81430652-81430671 | MsG0780040705.01.T01:CDS | 50.0% | |
ACTTCGACAAGGACATCACC+TGG | + | Chr7:81430517-81430536 | MsG0780040705.01.T01:CDS | 50.0% | |
AGCAGCTACAGGTACAGCAT+TGG | - | Chr7:81430404-81430423 | None:intergenic | 50.0% | |
CACTCACCCTACCTATGAAG+AGG | + | Chr7:81429794-81429813 | MsG0780040705.01.T01:CDS | 50.0% | |
CATTGACGACAGGTGGAAGA+GGG | - | Chr7:81429692-81429711 | None:intergenic | 50.0% | |
CGGTTCAAGCCAGTATGCTT+TGG | + | Chr7:81429973-81429992 | MsG0780040705.01.T01:CDS | 50.0% | |
CTTCGACAAGGACATCACCT+GGG | + | Chr7:81430518-81430537 | MsG0780040705.01.T01:CDS | 50.0% | |
GAAGGCTCCAACAAAAAGGG+GGG | + | Chr7:81430651-81430670 | MsG0780040705.01.T01:CDS | 50.0% | |
GGAAGGCTCCAACAAAAAGG+GGG | + | Chr7:81430650-81430669 | MsG0780040705.01.T01:CDS | 50.0% | |
GGACGCGATTGTGACTTTGA+AGG | + | Chr7:81429943-81429962 | MsG0780040705.01.T01:CDS | 50.0% | |
GGTAGGAAGTGAAAAGGGGA+GGG | + | Chr7:81430673-81430692 | MsG0780040705.01.T01:exon | 50.0% | |
GTAGCAGCTTTCTTCACAGC+TGG | - | Chr7:81430565-81430584 | None:intergenic | 50.0% | |
GTAGGAAGTGAAAAGGGGAG+GGG | + | Chr7:81430674-81430693 | MsG0780040705.01.T01:exon | 50.0% | |
TCATTGACGACAGGTGGAAG+AGG | - | Chr7:81429693-81429712 | None:intergenic | 50.0% | |
TCGGATTCATTGACGACAGG+TGG | - | Chr7:81429699-81429718 | None:intergenic | 50.0% | |
TCGTCGGATTCATTGACGAC+AGG | - | Chr7:81429702-81429721 | None:intergenic | 50.0% | |
TGCTGTACCTGTAGCTGCTA+AGG | + | Chr7:81430405-81430424 | MsG0780040705.01.T01:CDS | 50.0% | |
TTCGCCTTAGACTTAGCAGC+TGG | - | Chr7:81430220-81430239 | None:intergenic | 50.0% | |
TTTGTTGGAGCCTTCCTTGC+TGG | - | Chr7:81430646-81430665 | None:intergenic | 50.0% | |
! | TTCCTACCCCCCCTTTTTGT+TGG | - | Chr7:81430661-81430680 | None:intergenic | 50.0% |
!! | ACAGCATTGGCCTTAGCAAC+AGG | - | Chr7:81430391-81430410 | None:intergenic | 50.0% |
!!! | CTTTCGGGGTTTTGGCTCTT+TGG | - | Chr7:81429754-81429773 | None:intergenic | 50.0% |
!!! | GGCTCTTTGGGGGCTTTTTT+GGG | - | Chr7:81429741-81429760 | None:intergenic | 50.0% |
!!! | TGGCTCTTTGGGGGCTTTTT+TGG | - | Chr7:81429742-81429761 | None:intergenic | 50.0% |
!!! | TTCGGGGTTTTGGCTCTTTG+GGG | - | Chr7:81429752-81429771 | None:intergenic | 50.0% |
!!! | TTTGGGGGCTTTTTTGGGCT+TGG | - | Chr7:81429736-81429755 | None:intergenic | 50.0% |
AAAACCCAAGCCCAAGCCCA+AGG | + | Chr7:81430159-81430178 | MsG0780040705.01.T01:CDS | 55.0% | |
AGACTTAGCAGCTGGAGCCT+TGG | - | Chr7:81430212-81430231 | None:intergenic | 55.0% | |
AGCTGCTACGCCAGTGAAGA+AGG | + | Chr7:81430576-81430595 | MsG0780040705.01.T01:CDS | 55.0% | |
AGCTGCTCCTGCTAAGGCTA+AGG | + | Chr7:81430240-81430259 | MsG0780040705.01.T01:CDS | 55.0% | |
AGGGGGGGTAGGAAGTGAAA+AGG | + | Chr7:81430667-81430686 | MsG0780040705.01.T01:exon | 55.0% | |
AGTGCGAGGGTTCTTGGAAG+CGG | - | Chr7:81429778-81429797 | None:intergenic | 55.0% | |
CAAGGCTAAGCCAGCTGCAA+AGG | + | Chr7:81430333-81430352 | MsG0780040705.01.T01:CDS | 55.0% | |
CAAGGCTAAGCCAGCTGCTA+AGG | + | Chr7:81430279-81430298 | MsG0780040705.01.T01:CDS | 55.0% | |
CATAGGTAGGGTGAGTGCGA+GGG | - | Chr7:81429791-81429810 | None:intergenic | 55.0% | |
CTCCAACAAAAAGGGGGGGT+AGG | + | Chr7:81430656-81430675 | MsG0780040705.01.T01:CDS | 55.0% | |
GCTACAGGTGCTTTCGCCTT+GGG | - | Chr7:81430178-81430197 | None:intergenic | 55.0% | |
GGCTCCAGCTGCTAAGTCTA+AGG | + | Chr7:81430213-81430232 | MsG0780040705.01.T01:CDS | 55.0% | |
GGCTTTGCCTTAGCAGCTAC+AGG | - | Chr7:81430415-81430434 | None:intergenic | 55.0% | |
GGGGGGGTAGGAAGTGAAAA+GGG | + | Chr7:81430668-81430687 | MsG0780040705.01.T01:exon | 55.0% | |
GGGGGGTAGGAAGTGAAAAG+GGG | + | Chr7:81430669-81430688 | MsG0780040705.01.T01:exon | 55.0% | |
GGGTAGGAAGTGAAAAGGGG+AGG | + | Chr7:81430672-81430691 | MsG0780040705.01.T01:exon | 55.0% | |
TAAGGCTAAGCCAGCTGCCA+AGG | + | Chr7:81430441-81430460 | MsG0780040705.01.T01:CDS | 55.0% | |
TCATAGGTAGGGTGAGTGCG+AGG | - | Chr7:81429792-81429811 | None:intergenic | 55.0% | |
TGAAGAAGGCTGCACCAGCA+AGG | + | Chr7:81430629-81430648 | MsG0780040705.01.T01:CDS | 55.0% | |
! | CTTAGCAGCTGGCTTAGCCT+TGG | - | Chr7:81430281-81430300 | None:intergenic | 55.0% |
! | CTTTGCAGCTGGCTTAGCCT+TGG | - | Chr7:81430335-81430354 | None:intergenic | 55.0% |
! | GACGGTGGGTTCTTCAACAG+AGG | - | Chr7:81429625-81429644 | None:intergenic | 55.0% |
! | GGTTCTTGGAAGCGGGCTTT+CGG | - | Chr7:81429770-81429789 | None:intergenic | 55.0% |
! | GTTCTTGGAAGCGGGCTTTC+GGG | - | Chr7:81429769-81429788 | None:intergenic | 55.0% |
! | TTCTTGGAAGCGGGCTTTCG+GGG | - | Chr7:81429768-81429787 | None:intergenic | 55.0% |
!! | CTCCACAATGGGTTGCTCGA+CGG | - | Chr7:81429652-81429671 | None:intergenic | 55.0% |
!! | GCTTTGGCCTTAGCCTTAGC+AGG | - | Chr7:81430250-81430269 | None:intergenic | 55.0% |
!! | TTTTTGGGCTTGGCGGCAGT+GGG | - | Chr7:81429726-81429745 | None:intergenic | 55.0% |
!!! | TCGGGGTTTTGGCTCTTTGG+GGG | - | Chr7:81429751-81429770 | None:intergenic | 55.0% |
!!! | TTTTTTGGGCTTGGCGGCAG+TGG | - | Chr7:81429727-81429746 | None:intergenic | 55.0% |
ACCTGGGAAGAGAGCTGCTG+CGG | + | Chr7:81430534-81430553 | MsG0780040705.01.T01:CDS | 60.0% | |
AGCAACAGGAGCCTTCGCCT+TGG | - | Chr7:81430377-81430396 | None:intergenic | 60.0% | |
AGCACCTGTAGCCAAGGCTC+AGG | + | Chr7:81430186-81430205 | MsG0780040705.01.T01:CDS | 60.0% | |
AGCCTTGGCAGGAGCAGCTT+TGG | - | Chr7:81430266-81430285 | None:intergenic | 60.0% | |
AGCTGCTAAGGCAAAGCCCG+CGG | + | Chr7:81430417-81430436 | MsG0780040705.01.T01:CDS | 60.0% | |
AGGGTGAGTGCGAGGGTTCT+TGG | - | Chr7:81429784-81429803 | None:intergenic | 60.0% | |
AGGTGCTTTCGCCTTGGGCT+TGG | - | Chr7:81430173-81430192 | None:intergenic | 60.0% | |
CAAGGCAAAGCCTGCTGCCA+AGG | + | Chr7:81430315-81430334 | MsG0780040705.01.T01:CDS | 60.0% | |
CAAGGCGAAACCCGCTGTGA+AGG | + | Chr7:81430459-81430478 | MsG0780040705.01.T01:CDS | 60.0% | |
CGTCGAGCAACCCATTGTGG+AGG | + | Chr7:81429650-81429669 | MsG0780040705.01.T01:CDS | 60.0% | |
CTTGGCAGCAGGCTTTGCCT+TGG | - | Chr7:81430317-81430336 | None:intergenic | 60.0% | |
GAAGGCTGCACCAGCAAGGA+AGG | + | Chr7:81430633-81430652 | MsG0780040705.01.T01:CDS | 60.0% | |
GACAGGTGGAAGAGGGTCGA+CGG | - | Chr7:81429685-81429704 | None:intergenic | 60.0% | |
GCAACAGGAGCCTTCGCCTT+GGG | - | Chr7:81430376-81430395 | None:intergenic | 60.0% | |
GCAACCCATTGTGGAGGAGC+CGG | + | Chr7:81429656-81429675 | MsG0780040705.01.T01:CDS | 60.0% | |
GCCAGTGAAGAAGGCTGCAC+CGG | + | Chr7:81430585-81430604 | MsG0780040705.01.T01:CDS | 60.0% | |
GCTGGAGCAGCAGACTTAGC+TGG | - | Chr7:81430121-81430140 | None:intergenic | 60.0% | |
GCTGGTGCAGCCTTCTTCAC+TGG | - | Chr7:81430628-81430647 | None:intergenic | 60.0% | |
GGCGAAAGCTGCTCCTGCTA+AGG | + | Chr7:81430234-81430253 | MsG0780040705.01.T01:CDS | 60.0% | |
GGCGAAGGCTCCTGTTGCTA+AGG | + | Chr7:81430378-81430397 | MsG0780040705.01.T01:CDS | 60.0% | |
GGCTACAGGTGCTTTCGCCT+TGG | - | Chr7:81430179-81430198 | None:intergenic | 60.0% | |
GGCTGCTACGCCAGTGAAGA+AGG | + | Chr7:81430615-81430634 | MsG0780040705.01.T01:CDS | 60.0% | |
GGTGCTTTCGCCTTGGGCTT+GGG | - | Chr7:81430172-81430191 | None:intergenic | 60.0% | |
GTGCGAGGGTTCTTGGAAGC+GGG | - | Chr7:81429777-81429796 | None:intergenic | 60.0% | |
TAAGGCAAAGCCCGCGGCTA+AGG | + | Chr7:81430423-81430442 | MsG0780040705.01.T01:CDS | 60.0% | |
TAAGGCTAAGCCTGCCGCCA+AGG | + | Chr7:81430297-81430316 | MsG0780040705.01.T01:CDS | 60.0% | |
TGTAGCCAAGGCTCAGGCCA+AGG | + | Chr7:81430192-81430211 | MsG0780040705.01.T01:CDS | 60.0% | |
TTCGCCTTGGGCTTGGGCTT+GGG | - | Chr7:81430166-81430185 | None:intergenic | 60.0% | |
TTGGCCTGAGCCTTGGCTAC+AGG | - | Chr7:81430193-81430212 | None:intergenic | 60.0% | |
TTTCGCCTTGGGCTTGGGCT+TGG | - | Chr7:81430167-81430186 | None:intergenic | 60.0% | |
! | AGCTGGCTTCGCCTTCACAG+CGG | - | Chr7:81430473-81430492 | None:intergenic | 60.0% |
! | CTTCACAGCGGGTTTCGCCT+TGG | - | Chr7:81430461-81430480 | None:intergenic | 60.0% |
! | GGGCTTGGGCTTGGGTTTTG+CGG | - | Chr7:81430158-81430177 | None:intergenic | 60.0% |
!! | AGCTGGCTTAGCCTTAGCCG+CGG | - | Chr7:81430437-81430456 | None:intergenic | 60.0% |
!! | CACAATGGGTTGCTCGACGG+CGG | - | Chr7:81429649-81429668 | None:intergenic | 60.0% |
!! | GAAGCGGGCTTTCGGGGTTT+TGG | - | Chr7:81429762-81429781 | None:intergenic | 60.0% |
!! | GCAGGCTTAGCCTTAGCAGC+TGG | - | Chr7:81430292-81430311 | None:intergenic | 60.0% |
!! | GGCGAAAGCACCTGTAGCCA+AGG | + | Chr7:81430180-81430199 | MsG0780040705.01.T01:CDS | 60.0% |
!!! | GGGGGCTTTTTTGGGCTTGG+CGG | - | Chr7:81429733-81429752 | None:intergenic | 60.0% |
AGGTGGAAGAGGGTCGACGG+CGG | - | Chr7:81429682-81429701 | None:intergenic | 65.0% | |
CGCCGTCGAGCAACCCATTG+TGG | + | Chr7:81429647-81429666 | MsG0780040705.01.T01:CDS | 65.0% | |
GAAGCCTGCTGCGAAGCCCA+AGG | + | Chr7:81430357-81430376 | MsG0780040705.01.T01:CDS | 65.0% | |
GCAGGCTTCGCCTTTGCAGC+TGG | - | Chr7:81430346-81430365 | None:intergenic | 65.0% | |
GCCGGTGCAGCCTTCTTCAC+TGG | - | Chr7:81430589-81430608 | None:intergenic | 65.0% | |
GGCAGCAGGCTTTGCCTTGG+CGG | - | Chr7:81430314-81430333 | None:intergenic | 65.0% | |
GGCCAAAGCTGCTCCTGCCA+AGG | + | Chr7:81430261-81430280 | MsG0780040705.01.T01:CDS | 65.0% | |
GGCGTAGCAGCCTTCTTCGC+CGG | - | Chr7:81430607-81430626 | None:intergenic | 65.0% | |
TGAAGGCGAAGCCAGCTGCG+AGG | + | Chr7:81430476-81430495 | MsG0780040705.01.T01:CDS | 65.0% | |
TGCTGCGAAGCCCAAGGCGA+AGG | + | Chr7:81430363-81430382 | MsG0780040705.01.T01:CDS | 65.0% | |
TGGAGCCTTGGCCTGAGCCT+TGG | - | Chr7:81430200-81430219 | None:intergenic | 65.0% | |
TTCGCCTTGGGCTTCGCAGC+AGG | - | Chr7:81430364-81430383 | None:intergenic | 65.0% | |
! | GAAGGCTGCACCGGCGAAGA+AGG | + | Chr7:81430594-81430613 | MsG0780040705.01.T01:CDS | 65.0% |
! | GCTGGCTTCGCCTTCACAGC+GGG | - | Chr7:81430472-81430491 | None:intergenic | 65.0% |
! | GGCTTGGGTTTTGCGGCAGC+GGG | - | Chr7:81430151-81430170 | None:intergenic | 65.0% |
! | GGGCTTGGGTTTTGCGGCAG+CGG | - | Chr7:81430152-81430171 | None:intergenic | 65.0% |
!! | GCAGCTGGCTTAGCCTTGGC+AGG | - | Chr7:81430277-81430296 | None:intergenic | 65.0% |
!! | GCTGGCTTAGCCTTAGCCGC+GGG | - | Chr7:81430436-81430455 | None:intergenic | 65.0% |
!! | GCTGGCTTAGCCTTGGCAGC+AGG | - | Chr7:81430328-81430347 | None:intergenic | 65.0% |
GCAGGCTTTGCCTTGGCGGC+AGG | - | Chr7:81430310-81430329 | None:intergenic | 70.0% | |
GCCAGCTGCGAGGCCTGCTA+AGG | + | Chr7:81430486-81430505 | MsG0780040705.01.T01:CDS | 70.0% | |
GCCGCAGCAGCTCTCTTCCC+AGG | - | Chr7:81430538-81430557 | None:intergenic | 70.0% | |
GCCTTAGCAGGCCTCGCAGC+TGG | - | Chr7:81430490-81430509 | None:intergenic | 70.0% | |
GCGGGTTTCGCCTTGGCAGC+TGG | - | Chr7:81430454-81430473 | None:intergenic | 70.0% | |
GGGTTGCTCGACGGCGGAGA+CGG | - | Chr7:81429643-81429662 | None:intergenic | 70.0% | |
TGCTCGACGGCGGAGACGGT+GGG | - | Chr7:81429639-81429658 | None:intergenic | 70.0% | |
TTGCTCGACGGCGGAGACGG+TGG | - | Chr7:81429640-81429659 | None:intergenic | 70.0% | |
! | CTTGGCGGCAGTGGGCTCGT+CGG | - | Chr7:81429718-81429737 | None:intergenic | 70.0% |
! | GCGGCAGCGGGCTTCTTAGC+TGG | - | Chr7:81430139-81430158 | None:intergenic | 70.0% |
! | GCGGCCGGCTCCTCCACAAT+GGG | - | Chr7:81429663-81429682 | None:intergenic | 70.0% |
GGAAGAGGGTCGACGGCGGC+CGG | - | Chr7:81429678-81429697 | None:intergenic | 75.0% | |
! | GGCGGCCGGCTCCTCCACAA+TGG | - | Chr7:81429664-81429683 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr7 | gene | 81429532 | 81430901 | 81429532 | ID=MsG0780040705.01;Name=MsG0780040705.01 |
Chr7 | mRNA | 81429532 | 81430901 | 81429532 | ID=MsG0780040705.01.T01;Parent=MsG0780040705.01;Name=MsG0780040705.01.T01;_AED=0.49;_eAED=0.49;_QI=83|1|1|1|1|1|2|217|316 |
Chr7 | exon | 81429532 | 81429815 | 81429532 | ID=MsG0780040705.01.T01:exon:20105;Parent=MsG0780040705.01.T01 |
Chr7 | exon | 81429935 | 81430901 | 81429935 | ID=MsG0780040705.01.T01:exon:20106;Parent=MsG0780040705.01.T01 |
Chr7 | five_prime_UTR | 81429532 | 81429614 | 81429532 | ID=MsG0780040705.01.T01:five_prime_utr;Parent=MsG0780040705.01.T01 |
Chr7 | CDS | 81429615 | 81429815 | 81429615 | ID=MsG0780040705.01.T01:cds;Parent=MsG0780040705.01.T01 |
Chr7 | CDS | 81429935 | 81430684 | 81429935 | ID=MsG0780040705.01.T01:cds;Parent=MsG0780040705.01.T01 |
Chr7 | three_prime_UTR | 81430685 | 81430901 | 81430685 | ID=MsG0780040705.01.T01:three_prime_utr;Parent=MsG0780040705.01.T01 |
Gene Sequence |
Protein sequence |