AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880043865.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880043865.01.T01 MTR_8g042750 96.501 686 22 1 11 694 3 688 0.0 1387
MsG0880043865.01.T01 MTR_3g011440 60.292 685 233 8 12 693 15 663 0.0 849
MsG0880043865.01.T01 MTR_7g088370 45.293 733 329 15 3 693 2 704 0.0 616
MsG0880043865.01.T01 MTR_5g013420 39.867 602 325 14 102 693 514 1088 2.60e-126 401
MsG0880043865.01.T01 MTR_5g013420 39.833 600 324 14 102 691 514 1086 3.90e-125 398
MsG0880043865.01.T01 MTR_4g010830 38.850 574 316 14 128 691 429 977 8.31e-115 369
MsG0880043865.01.T01 MTR_8g070070 41.556 450 245 12 226 665 317 758 1.46e-105 338
MsG0880043865.01.T01 MTR_1g035420 39.960 503 279 14 173 665 158 647 8.42e-105 333
MsG0880043865.01.T01 MTR_8g070075 40.089 449 251 10 226 664 310 750 8.75e-104 333
MsG0880043865.01.T01 MTR_8g071030 39.741 463 251 9 218 665 289 738 1.27e-102 330
MsG0880043865.01.T01 MTR_4g010550 38.990 495 252 14 200 691 14 461 1.34e-101 319
MsG0880043865.01.T01 MTR_1g035400 36.822 516 286 16 173 665 68 566 2.54e-92 298
MsG0880043865.01.T01 MTR_6g044690 36.571 525 280 17 173 664 60 564 3.15e-90 293
MsG0880043865.01.T01 MTR_0376s0030 36.207 522 290 16 170 663 55 561 2.05e-86 283
MsG0880043865.01.T01 MTR_6g061270 34.902 510 293 13 206 690 195 690 7.52e-85 282
MsG0880043865.01.T01 MTR_7g084090 34.442 511 295 13 206 690 257 753 1.63e-84 282
MsG0880043865.01.T01 MTR_6g061200 34.000 500 282 12 206 690 195 661 3.44e-80 269
MsG0880043865.01.T01 MTR_6g043960 33.678 484 274 16 192 664 35 482 5.49e-71 239
MsG0880043865.01.T01 MTR_1g048950 33.952 539 294 12 173 691 34 530 1.78e-69 237
MsG0880043865.01.T01 MTR_7g084090 35.433 381 221 10 206 570 257 628 7.56e-64 224
MsG0880043865.01.T01 MTR_2g054460 32.308 520 260 18 173 664 9 464 8.50e-63 216
MsG0880043865.01.T01 MTR_7g445710 31.047 554 271 23 162 689 70 538 9.95e-61 213
MsG0880043865.01.T01 MTR_7g445530 31.238 525 255 21 162 662 70 512 1.11e-57 204
MsG0880043865.01.T01 MTR_7g450730 29.511 532 273 17 162 689 67 500 1.51e-52 189
MsG0880043865.01.T01 MTR_7g052480 33.788 293 181 6 405 690 266 552 1.92e-42 162
MsG0880043865.01.T01 MTR_1g080340 28.743 334 170 8 407 690 267 582 3.93e-34 138
MsG0880043865.01.T01 MTR_5g018850 31.532 333 161 12 398 691 1200 1504 3.65e-30 128
MsG0880043865.01.T01 MTR_7g098390 28.739 341 174 10 401 692 380 700 3.49e-29 124
MsG0880043865.01.T01 MTR_8g078490 28.571 329 177 8 396 691 947 1250 7.80e-29 124
MsG0880043865.01.T01 MTR_1g069570 28.274 336 172 9 407 692 428 744 1.02e-28 122
MsG0880043865.01.T01 MTR_8g078505 30.368 326 172 11 392 689 235 533 1.63e-27 117
MsG0880043865.01.T01 MTR_4g132610 34.419 215 118 5 478 691 852 1044 1.79e-27 119
MsG0880043865.01.T01 MTR_7g445600 33.987 153 61 2 510 662 243 355 7.41e-23 101
MsG0880043865.01.T01 MTR_7g445600 32.386 176 96 8 162 335 66 220 1.30e-11 67.0
MsG0880043865.01.T01 MTR_1g098000 31.401 207 92 6 495 694 72 235 9.01e-21 96.7
MsG0880043865.01.T01 MTR_1g098370 31.401 207 92 6 495 694 75 238 9.77e-21 96.7
MsG0880043865.01.T01 MTR_1g069570 26.894 264 129 7 407 621 428 676 7.70e-18 88.2
MsG0880043865.01.T01 MTR_0071s0100 30.374 214 108 6 481 694 177 349 3.03e-16 81.6
MsG0880043865.01.T01 MTR_6g059310 27.094 203 110 5 492 694 87 251 5.23e-14 74.3
MsG0880043865.01.T01 MTR_6g059310 27.094 203 110 5 492 694 87 251 6.04e-14 74.3
MsG0880043865.01.T01 MTR_1g064770 44.444 63 34 1 490 551 28 90 6.74e-12 62.4
MsG0880043865.01.T01 MTR_7g445810 30.653 199 109 9 169 361 91 266 2.79e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880043865.01.T01 AT1G73100 49.420 690 305 12 13 694 16 669 0.0 655
MsG0880043865.01.T01 AT5G04940 47.076 701 311 9 14 694 10 670 0.0 650
MsG0880043865.01.T01 AT5G04940 47.076 701 311 9 14 694 10 670 0.0 650
MsG0880043865.01.T01 AT1G17770 40.446 717 366 21 13 693 1 692 1.41e-153 461
MsG0880043865.01.T01 AT2G24740 46.211 541 235 13 168 694 257 755 7.00e-147 446
MsG0880043865.01.T01 AT2G35160 39.591 538 271 16 165 691 261 755 3.71e-109 348
MsG0880043865.01.T01 AT2G35160 39.591 538 271 16 165 691 297 791 9.62e-109 348
MsG0880043865.01.T01 AT2G35160 39.591 538 271 16 165 691 297 791 9.62e-109 348
MsG0880043865.01.T01 AT2G35160 39.591 538 271 16 165 691 297 791 9.62e-109 348
MsG0880043865.01.T01 AT2G35160 39.591 538 271 16 165 691 297 791 9.62e-109 348
MsG0880043865.01.T01 AT4G13460 38.142 506 289 12 173 665 145 639 2.66e-107 340
MsG0880043865.01.T01 AT4G13460 38.142 506 289 12 173 665 145 639 2.66e-107 340
MsG0880043865.01.T01 AT2G22740 38.302 530 302 12 173 690 270 786 2.65e-106 341
MsG0880043865.01.T01 AT2G22740 38.302 530 302 12 173 690 270 786 2.65e-106 341
MsG0880043865.01.T01 AT2G33290 37.376 503 294 11 173 665 149 640 3.30e-101 324
MsG0880043865.01.T01 AT2G33290 37.376 503 294 11 173 665 149 640 3.30e-101 324
MsG0880043865.01.T01 AT2G33290 37.376 503 294 11 173 665 149 640 3.30e-101 324
MsG0880043865.01.T01 AT2G33290 37.376 503 294 11 173 665 149 640 3.30e-101 324
MsG0880043865.01.T01 AT5G13960 35.185 486 284 12 226 690 11 486 8.06e-85 276
MsG0880043865.01.T01 AT5G13960 34.646 508 299 13 205 690 124 620 1.93e-84 279
MsG0880043865.01.T01 AT5G47150 41.509 212 117 4 173 382 118 324 8.63e-44 160
MsG0880043865.01.T01 AT2G05900 42.857 196 108 3 247 440 1 194 6.73e-42 155
MsG0880043865.01.T01 AT2G05900 51.163 86 33 1 609 694 236 312 1.44e-21 96.7
MsG0880043865.01.T01 AT3G04380 28.060 335 170 8 407 690 144 458 5.19e-37 145
MsG0880043865.01.T01 AT3G04380 28.060 335 170 8 407 690 144 458 5.52e-37 145
MsG0880043865.01.T01 AT3G04380 28.060 335 170 8 407 690 117 431 5.61e-37 145
MsG0880043865.01.T01 AT3G04380 28.060 335 170 8 407 690 128 442 5.93e-37 145
MsG0880043865.01.T01 AT3G04380 28.060 335 170 8 407 690 101 415 6.65e-37 144
MsG0880043865.01.T01 AT3G04380 28.060 335 170 8 407 690 117 431 6.92e-37 144
MsG0880043865.01.T01 AT5G47160 41.410 227 122 6 156 378 188 407 6.05e-35 138
MsG0880043865.01.T01 AT5G47160 41.410 227 122 6 156 378 188 407 6.05e-35 138
MsG0880043865.01.T01 AT5G47160 41.410 227 122 6 156 378 188 407 6.05e-35 138
MsG0880043865.01.T01 AT1G04050 28.382 377 183 11 366 690 274 615 2.77e-30 127
MsG0880043865.01.T01 AT1G04050 28.912 377 181 12 366 690 378 719 3.05e-30 127
MsG0880043865.01.T01 AT1G04050 28.912 377 181 12 366 690 378 719 3.05e-30 127
MsG0880043865.01.T01 AT2G23740 30.818 318 168 12 404 693 1081 1374 2.32e-29 125
MsG0880043865.01.T01 AT2G23740 30.818 318 168 12 404 693 1088 1381 2.54e-29 125
MsG0880043865.01.T01 AT2G23740 30.818 318 168 12 404 693 1088 1381 2.54e-29 125
MsG0880043865.01.T01 AT2G23740 30.818 318 168 12 404 693 1088 1381 2.54e-29 125
MsG0880043865.01.T01 AT5G43990 26.429 420 209 14 321 690 313 682 3.63e-29 124
MsG0880043865.01.T01 AT5G43990 26.429 420 209 14 321 690 313 682 3.63e-29 124
MsG0880043865.01.T01 AT5G43990 26.429 420 209 14 321 690 313 682 3.63e-29 124
MsG0880043865.01.T01 AT5G43990 26.429 420 209 14 321 690 313 682 3.63e-29 124
MsG0880043865.01.T01 AT5G43990 26.429 420 209 14 321 690 336 705 4.27e-29 124
MsG0880043865.01.T01 AT5G43990 26.429 420 209 14 321 690 336 705 4.27e-29 124
MsG0880043865.01.T01 AT5G43990 26.429 420 209 14 321 690 333 702 4.83e-29 124
MsG0880043865.01.T01 AT5G43990 26.429 420 209 14 321 690 333 702 4.83e-29 124
MsG0880043865.01.T01 AT5G43990 26.429 420 209 14 321 690 333 702 4.83e-29 124
MsG0880043865.01.T01 AT5G43990 26.429 420 209 14 321 690 333 702 4.83e-29 124
MsG0880043865.01.T01 AT5G43990 26.429 420 209 14 321 690 356 725 5.58e-29 123
MsG0880043865.01.T01 AT5G43990 26.429 420 209 14 321 690 356 725 5.58e-29 123
MsG0880043865.01.T01 AT5G43990 26.849 365 181 11 376 690 285 613 5.80e-29 123
MsG0880043865.01.T01 AT5G43990 26.429 420 209 14 321 690 264 633 6.50e-29 123
MsG0880043865.01.T01 AT5G43990 26.429 420 209 14 321 690 264 633 6.50e-29 123
MsG0880043865.01.T01 AT5G43990 26.429 420 209 14 321 690 264 633 6.50e-29 123
MsG0880043865.01.T01 AT5G43990 26.429 420 209 14 321 690 264 633 6.50e-29 123
MsG0880043865.01.T01 AT2G23740 31.301 246 122 11 404 621 1088 1314 5.96e-20 95.9
MsG0880043865.01.T01 AT2G23740 31.301 246 122 11 404 621 1088 1314 5.96e-20 95.9
MsG0880043865.01.T01 AT3G03750 30.396 227 131 8 468 691 145 347 6.00e-19 89.7
MsG0880043865.01.T01 AT4G30860 28.643 199 102 5 496 694 307 465 2.39e-14 76.6
MsG0880043865.01.T01 AT3G03750 27.556 225 124 8 468 691 145 331 2.13e-13 72.4
MsG0880043865.01.T01 AT3G59960 28.333 180 87 6 517 694 111 250 6.19e-11 64.3
MsG0880043865.01.T01 AT3G59960 28.333 180 87 6 517 694 111 250 6.19e-11 64.3
MsG0880043865.01.T01 AT3G59960 28.333 180 87 6 517 694 111 250 6.19e-11 64.3

Find 156 sgRNAs with CRISPR-Local

Find 188 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTTATGCTGCTTGGAAAT+TGG 0.240702 8:+31846022 MsG0880043865.01.T01:CDS
CTCTTTCAATCCAAGAATCT+TGG 0.247325 8:-31845941 None:intergenic
GAACTCTTGTAGGCCCTTAT+TGG 0.250077 8:-31845156 None:intergenic
GCACTAGACCAAAAGGTTTC+GGG 0.260116 8:-31846196 None:intergenic
AGCTATATTTCCCACATTCT+TGG 0.262990 8:-31846696 None:intergenic
AACATGGATTGAACATGTTT+TGG 0.264294 8:-31844964 None:intergenic
GCATCAAGAGGGGTTTCTTC+AGG 0.301685 8:-31845063 None:intergenic
TGCACTAGACCAAAAGGTTT+CGG 0.303413 8:-31846197 None:intergenic
TGGTGCCTGGGATTGAGATT+GGG 0.314399 8:+31845562 MsG0880043865.01.T01:CDS
GTGGTGCCTGGGATTGAGAT+TGG 0.321695 8:+31845561 MsG0880043865.01.T01:CDS
TTCTTGGCACTTATAATTAG+AGG 0.323045 8:-31846680 None:intergenic
TGGAGATAGCGACGATTATT+CGG 0.325609 8:+31845209 MsG0880043865.01.T01:CDS
TTCATCATGTGAACTCTTGT+AGG 0.336128 8:-31845166 None:intergenic
GATTATTCGGAAGGGTTTGT+AGG 0.338716 8:+31845222 MsG0880043865.01.T01:CDS
CCATTGGAGGAATATGTCTA+AGG 0.339713 8:-31846814 None:intergenic
GGGGTTTCTTCAGGTTCTTT+TGG 0.342799 8:-31845054 None:intergenic
ATTGCAAAGAGTTTCTTAAA+AGG 0.342943 8:+31845280 MsG0880043865.01.T01:CDS
TATATAAAATCCAAGATTCT+TGG 0.344747 8:+31845931 MsG0880043865.01.T01:CDS
GCAGAGTTAACATATGATTA+TGG 0.349411 8:+31846836 MsG0880043865.01.T01:CDS
AGAAGAGCGGGCGTGGTGCC+TGG 0.355977 8:+31845549 MsG0880043865.01.T01:CDS
TTTCTGGTGGATACCCTTCT+GGG 0.356149 8:+31844986 MsG0880043865.01.T01:CDS
GCAAAGTGCCGTGGTTTCTT+TGG 0.357611 8:+31846929 MsG0880043865.01.T01:CDS
CTGCTAAAGTGACTCCAATA+AGG 0.365251 8:+31845142 MsG0880043865.01.T01:CDS
GAATTATGAACCTAGCTTAC+TGG 0.368503 8:+31846610 MsG0880043865.01.T01:CDS
CAGAACAAAGGGTAGAGGTT+GGG 0.385564 8:+31846436 MsG0880043865.01.T01:CDS
TTCTTGCTGACCTCTCCAAT+GGG 0.387936 8:+31846087 MsG0880043865.01.T01:CDS
ACTTGAATGGTTCATAAATA+CGG 0.393021 8:-31846586 None:intergenic
TCAAAGAGGTAATCTTGCTT+TGG 0.393398 8:+31845815 MsG0880043865.01.T01:CDS
GAGTATCAAGGATGGATCTA+AGG 0.393584 8:+31845659 MsG0880043865.01.T01:CDS
AGAATACTATTTGCAGTATA+CGG 0.394436 8:-31846305 None:intergenic
GGTTCATAATTCCACTTGAA+TGG 0.395912 8:-31846599 None:intergenic
ACATCATTGACAAGTGATAC+TGG 0.398710 8:-31846122 None:intergenic
TGGATTGAAAGAGGGAAATC+TGG 0.399448 8:+31845951 MsG0880043865.01.T01:CDS
AGTAATGCTTTGACTTGTAA+AGG 0.409168 8:+31845507 MsG0880043865.01.T01:CDS
GTTGTTTCGTCAGGTGTATA+TGG 0.410656 8:+31845702 MsG0880043865.01.T01:CDS
GCGTTAAGCGTTGTTTCGTC+AGG 0.419354 8:+31845693 MsG0880043865.01.T01:CDS
GGAGTCACTTTAGCAGCAAC+AGG 0.425135 8:-31845135 None:intergenic
AGAACAAAGGGTAGAGGTTG+GGG 0.428660 8:+31846437 MsG0880043865.01.T01:CDS
ATTCTTGCTGACCTCTCCAA+TGG 0.429575 8:+31846086 MsG0880043865.01.T01:CDS
CACTAAAAGATGATGGTGAT+AGG 0.431343 8:+31845367 MsG0880043865.01.T01:CDS
GTAATGCTTTGACTTGTAAA+GGG 0.433132 8:+31845508 MsG0880043865.01.T01:CDS
CACGAGGAGAAGAGCGGGCG+TGG 0.458603 8:+31845542 MsG0880043865.01.T01:CDS
CGAATGGAAATGTGTCTTGT+GGG 0.460019 8:+31845600 MsG0880043865.01.T01:CDS
GGTTTGACGTATGAGTAAAA+TGG 0.462437 8:-31845015 None:intergenic
TGCTAAAGTGACTCCAATAA+GGG 0.462630 8:+31845143 MsG0880043865.01.T01:CDS
CAAGATTCTTGGATTGAAAG+AGG 0.462943 8:+31845942 MsG0880043865.01.T01:CDS
GCATTTCTTTCTCCTTCTAA+AGG 0.463277 8:-31846894 None:intergenic
GGGTTTGCATGCTCAATCAA+TGG 0.467421 8:+31845620 MsG0880043865.01.T01:CDS
ATTACCCATGCTGGTCATGC+TGG 0.474621 8:+31846860 MsG0880043865.01.T01:CDS
CTTACATCTTCCAGTAAGCT+AGG 0.477855 8:-31846620 None:intergenic
TTACAATTGCAGCTTAAAGA+AGG 0.477858 8:-31846221 None:intergenic
ATAAAAGTACCAGCACGTAT+AGG 0.483482 8:-31846476 None:intergenic
GAAGAGCGGGCGTGGTGCCT+GGG 0.483938 8:+31845550 MsG0880043865.01.T01:CDS
TATTTAAGTATAAGTTGGTA+AGG 0.490370 8:+31845982 MsG0880043865.01.T01:CDS
TGAGCTGCTGCTGCTTTCAC+CGG 0.492787 8:-31845105 None:intergenic
CACAGGTGCTAAACTACGTA+AGG 0.494286 8:-31844938 None:intergenic
CATGAACAGTTCAAATCACC+TGG 0.499372 8:-31846257 None:intergenic
GAGGTAGCAGTGCCTTTAGA+AGG 0.502063 8:+31846882 MsG0880043865.01.T01:CDS
AAAACTCGCGAGCCGGTTGT+TGG 0.502511 8:+31845312 MsG0880043865.01.T01:CDS
ACCTCCAGCATGACCAGCAT+GGG 0.504841 8:-31846864 None:intergenic
TTCATGCATTCAAAGAAATG+AGG 0.505419 8:+31846274 MsG0880043865.01.T01:CDS
GCACTTATAATTAGAGGAGA+TGG 0.508609 8:-31846674 None:intergenic
GAAGGCTGCACTAGACCAAA+AGG 0.511466 8:-31846203 None:intergenic
TGGTATATTTAAGTATAAGT+TGG 0.512381 8:+31845977 MsG0880043865.01.T01:CDS
TTCAACATTCTGATATACCT+TGG 0.513102 8:-31846531 None:intergenic
CGGCTACTTTGGCATCAAGA+GGG 0.513820 8:-31845074 None:intergenic
CTTGGAAATTGGCTCAAAAG+TGG 0.515222 8:+31846033 MsG0880043865.01.T01:CDS
AAGGTATATCAGAATGTTGA+AGG 0.517616 8:+31846533 MsG0880043865.01.T01:CDS
TGGAATACTTTCAACCCCAT+TGG 0.517944 8:-31846102 None:intergenic
TCATATGTTAACTCTGCCAT+TGG 0.520039 8:-31846830 None:intergenic
ATGGAAGTGTTCAGAACAAA+GGG 0.520947 8:+31846425 MsG0880043865.01.T01:CDS
TATGTTAACTCTGCCATTGG+AGG 0.521537 8:-31846827 None:intergenic
AATAAAACCATTCCTTGTAC+AGG 0.521861 8:-31846066 None:intergenic
GAAGAACAAAACTCGCGAGC+CGG 0.522460 8:+31845305 MsG0880043865.01.T01:CDS
TATAAGTTGGTAAGGTTACC+TGG 0.522467 8:+31845990 MsG0880043865.01.T01:CDS
GAACTCGTACCACCAACAAC+CGG 0.528217 8:-31845324 None:intergenic
GGAAGGCAGGTTCCTGTACA+AGG 0.528660 8:+31846054 MsG0880043865.01.T01:CDS
TGATAAACGAAAGCGTAGTA+CGG 0.532272 8:+31845245 MsG0880043865.01.T01:CDS
TGTAACACAGCATGTGTCCC+AGG 0.534817 8:+31846239 MsG0880043865.01.T01:CDS
TCGGCTACTTTGGCATCAAG+AGG 0.534991 8:-31845075 None:intergenic
AACAAACACGAGGAGAAGAG+CGG 0.537646 8:+31845536 MsG0880043865.01.T01:CDS
GCAGGTTCCTGTACAAGGAA+TGG 0.539532 8:+31846059 MsG0880043865.01.T01:CDS
AATTATAAGTGCCAAGAATG+TGG 0.540601 8:+31846685 MsG0880043865.01.T01:CDS
TCGAATGGAAATGTGTCTTG+TGG 0.542415 8:+31845599 MsG0880043865.01.T01:CDS
TTGGCTCAAAAGTGGAAGGC+AGG 0.546449 8:+31846041 MsG0880043865.01.T01:CDS
CCTTAGACATATTCCTCCAA+TGG 0.547540 8:+31846814 MsG0880043865.01.T01:CDS
GGTTTGCATGCTCAATCAAT+GGG 0.548358 8:+31845621 MsG0880043865.01.T01:CDS
ACTAAAAGATGATGGTGATA+GGG 0.551648 8:+31845368 MsG0880043865.01.T01:CDS
CAAATAGTATTCTAGTGAGT+CGG 0.552747 8:+31846315 MsG0880043865.01.T01:CDS
AAGATTCTTGGATTGAAAGA+GGG 0.554674 8:+31845943 MsG0880043865.01.T01:CDS
ACTCGCGAGCCGGTTGTTGG+TGG 0.555816 8:+31845315 MsG0880043865.01.T01:CDS
TCAGAACAAAGGGTAGAGGT+TGG 0.558625 8:+31846435 MsG0880043865.01.T01:CDS
GGTGCCTGGGATTGAGATTG+GGG 0.558794 8:+31845563 MsG0880043865.01.T01:CDS
GATTATGGAATTACCCATGC+TGG 0.562248 8:+31846851 MsG0880043865.01.T01:CDS
AACCCGACACTAAAAGATGA+TGG 0.564385 8:+31845360 MsG0880043865.01.T01:CDS
GTAGGAAAACACCGACACAT+AGG 0.564832 8:-31846362 None:intergenic
AGGGTATCCACCAGAAAACA+TGG 0.570325 8:-31844980 None:intergenic
ACATCCCCAATCTCAATCCC+AGG 0.570470 8:-31845567 None:intergenic
TACCTCCAGCATGACCAGCA+TGG 0.572482 8:-31846865 None:intergenic
TAGGAAAACACCGACACATA+GGG 0.573999 8:-31846361 None:intergenic
GATAGCGACGATTATTCGGA+AGG 0.574436 8:+31845213 MsG0880043865.01.T01:CDS
GATGAAGTTAGAGTCATTCG+AGG 0.576279 8:+31845858 MsG0880043865.01.T01:CDS
GGCTACTTTGGCATCAAGAG+GGG 0.578550 8:-31845073 None:intergenic
ATTATAAGTGCCAAGAATGT+GGG 0.579471 8:+31846686 MsG0880043865.01.T01:CDS
GAAATGAATCAACAAGGCGA+TGG 0.581588 8:+31845189 MsG0880043865.01.T01:CDS
GTGTTCAGAACAAAGGGTAG+AGG 0.581999 8:+31846431 MsG0880043865.01.T01:CDS
TGACGTTTGATTCAATTCGA+AGG 0.582508 8:+31845412 MsG0880043865.01.T01:CDS
TACTTTCAACCCCATTGGAG+AGG 0.582710 8:-31846097 None:intergenic
AAGCCGCTTATTCATGAATG+TGG 0.582827 8:+31846338 MsG0880043865.01.T01:CDS
GTTCCTTCGACTCTTCAAGT+TGG 0.586309 8:-31845443 None:intergenic
ACACTGGATCCTATACGTGC+TGG 0.589618 8:+31846467 MsG0880043865.01.T01:CDS
GGTGGTACGAGTTCTTATGT+TGG 0.589976 8:+31845333 MsG0880043865.01.T01:CDS
CATTGGAGGAATATGTCTAA+GGG 0.591612 8:-31846813 None:intergenic
AATTGATTATATGAGTATCA+AGG 0.594679 8:+31845647 MsG0880043865.01.T01:CDS
CATGGAAGTGTTCAGAACAA+AGG 0.594814 8:+31846424 MsG0880043865.01.T01:CDS
TTTGGAAGAGGAATGTGATG+GGG 0.595616 8:-31845036 None:intergenic
CAATGATGTCGATGATGAGA+AGG 0.596174 8:+31846136 MsG0880043865.01.T01:CDS
ACAAACACGAGGAGAAGAGC+GGG 0.596233 8:+31845537 MsG0880043865.01.T01:CDS
GACTGGTTTAAAACAACACA+TGG 0.599479 8:+31846406 MsG0880043865.01.T01:CDS
AGAAGTTATTAACAGAGCCA+AGG 0.601057 8:+31846514 MsG0880043865.01.T01:CDS
TCATGCATTCAAAGAAATGA+GGG 0.603338 8:+31846275 MsG0880043865.01.T01:CDS
CGTTTGATTCAATTCGAAGG+AGG 0.603429 8:+31845415 MsG0880043865.01.T01:CDS
TAAAATGGAGGAAACCCAGA+AGG 0.605934 8:-31845000 None:intergenic
GTATTTATGAACCATTCAAG+TGG 0.607961 8:+31846588 MsG0880043865.01.T01:CDS
GAAATTGGCTCAAAAGTGGA+AGG 0.609566 8:+31846037 MsG0880043865.01.T01:CDS
AGGAGAAAGAAATGCTTGTG+TGG 0.611149 8:+31846902 MsG0880043865.01.T01:CDS
GAACAAAGGGTAGAGGTTGG+GGG 0.611366 8:+31846438 MsG0880043865.01.T01:CDS
GATTATATGAGTATCAAGGA+TGG 0.613333 8:+31845651 MsG0880043865.01.T01:CDS
ATAGCGACGATTATTCGGAA+GGG 0.618833 8:+31845214 MsG0880043865.01.T01:CDS
GGAGAAAGAAATGCTTGTGT+GGG 0.619249 8:+31846903 MsG0880043865.01.T01:CDS
ATGCCAACTTGAAGAGTCGA+AGG 0.621780 8:+31845440 MsG0880043865.01.T01:CDS
ACCCATGCTGGTCATGCTGG+AGG 0.621845 8:+31846863 MsG0880043865.01.T01:CDS
TTGACGTATGAGTAAAATGG+AGG 0.626397 8:-31845012 None:intergenic
TCTTGCTGACCTCTCCAATG+GGG 0.629627 8:+31846088 MsG0880043865.01.T01:CDS
GAAAGAGGGAAATCTGGCGG+TGG 0.632493 8:+31845957 MsG0880043865.01.T01:CDS
AAGTTCAAATGTATGTAGTG+AGG 0.636973 8:+31846640 MsG0880043865.01.T01:CDS
GGGCCACATTCATGAATAAG+CGG 0.645886 8:-31846341 None:intergenic
TTGGCAGCCAGTCTTATATG+CGG 0.646377 8:+31846754 MsG0880043865.01.T01:CDS
TATCAAGGATGGATCTAAGG+AGG 0.648003 8:+31845662 MsG0880043865.01.T01:CDS
TGCACTTGCTATCAAGCGTG+CGG 0.648738 8:+31845473 MsG0880043865.01.T01:CDS
ACTGATCAGAAGCTTCAAAG+AGG 0.649359 8:+31845801 MsG0880043865.01.T01:CDS
TTGCATGCTCAATCAATGGG+TGG 0.651570 8:+31845624 MsG0880043865.01.T01:CDS
TGTATATGGTGATGATACAG+AGG 0.665371 8:+31845716 MsG0880043865.01.T01:CDS
TGTGGGTCAGCAAAGTGCCG+TGG 0.671789 8:+31846920 MsG0880043865.01.T01:CDS
ATGAATGTGGCCCTATGTGT+CGG 0.674340 8:+31846351 MsG0880043865.01.T01:CDS
CAAAGTAGCCGAGAAAACGC+CGG 0.676869 8:+31845086 MsG0880043865.01.T01:CDS
AAAATGGAGGAAACCCAGAA+GGG 0.679014 8:-31844999 None:intergenic
ACAGGTGCTAAACTACGTAA+GGG 0.679266 8:-31844937 None:intergenic
TGGATCTAAGGAGGATACTG+TGG 0.679943 8:+31845671 MsG0880043865.01.T01:CDS
AATGATGTCGATGATGAGAA+GGG 0.683211 8:+31846137 MsG0880043865.01.T01:CDS
ATTGTTAACCAAAGAAACCA+CGG 0.691606 8:-31846937 None:intergenic
GATGAAGAAATGAATCAACA+AGG 0.703890 8:+31845183 MsG0880043865.01.T01:CDS
ATTGAAAGAGGGAAATCTGG+CGG 0.710427 8:+31845954 MsG0880043865.01.T01:CDS
ATGAACAGTTCAAATCACCT+GGG 0.723585 8:-31846256 None:intergenic
AAGGGTTTAAAACAAACACG+AGG 0.770459 8:+31845526 MsG0880043865.01.T01:CDS
CTTTGGACAGAAGTGCACAG+CGG 0.772147 8:+31845832 MsG0880043865.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATAATGTTTTAATTTATAG+TGG + Chr8:31845741-31845760 MsG0880043865.01.T01:CDS 10.0%
!! AATTGATTATATGAGTATCA+AGG + Chr8:31845647-31845666 MsG0880043865.01.T01:CDS 20.0%
!! TATATAAAATCCAAGATTCT+TGG + Chr8:31845931-31845950 MsG0880043865.01.T01:CDS 20.0%
!! TCAAAAATCTATATGTATGA+TGG + Chr8:31845906-31845925 MsG0880043865.01.T01:CDS 20.0%
!! TGGTATATTTAAGTATAAGT+TGG + Chr8:31845977-31845996 MsG0880043865.01.T01:CDS 20.0%
!!! TATTTAAGTATAAGTTGGTA+AGG + Chr8:31845982-31846001 MsG0880043865.01.T01:CDS 20.0%
! AAAAAATGCAATGTGGATAA+AGG - Chr8:31846792-31846811 None:intergenic 25.0%
! ACTTGAATGGTTCATAAATA+CGG - Chr8:31846589-31846608 None:intergenic 25.0%
! AGAATACTATTTGCAGTATA+CGG - Chr8:31846308-31846327 None:intergenic 25.0%
! ATTGCAAAGAGTTTCTTAAA+AGG + Chr8:31845280-31845299 MsG0880043865.01.T01:CDS 25.0%
!! ATTTTTGAACTTCTATTCAC+AGG - Chr8:31845894-31845913 None:intergenic 25.0%
!!! GTTTTAATTTATAGTGGTCA+GGG + Chr8:31845747-31845766 MsG0880043865.01.T01:CDS 25.0%
!!! TGTTTTAATTTATAGTGGTC+AGG + Chr8:31845746-31845765 MsG0880043865.01.T01:CDS 25.0%
AAAAAATTGCTTATGCTGCT+TGG + Chr8:31846015-31846034 MsG0880043865.01.T01:CDS 30.0%
AAGATTCTTGGATTGAAAGA+GGG + Chr8:31845943-31845962 MsG0880043865.01.T01:CDS 30.0%
AAGGTATATCAGAATGTTGA+AGG + Chr8:31846533-31846552 MsG0880043865.01.T01:CDS 30.0%
AAGTTCAAATGTATGTAGTG+AGG + Chr8:31846640-31846659 MsG0880043865.01.T01:CDS 30.0%
AATAAAACCATTCCTTGTAC+AGG - Chr8:31846069-31846088 None:intergenic 30.0%
AATTATAAGTGCCAAGAATG+TGG + Chr8:31846685-31846704 MsG0880043865.01.T01:CDS 30.0%
ATTATAAGTGCCAAGAATGT+GGG + Chr8:31846686-31846705 MsG0880043865.01.T01:CDS 30.0%
CAAATAGTATTCTAGTGAGT+CGG + Chr8:31846315-31846334 MsG0880043865.01.T01:CDS 30.0%
GATGAAGAAATGAATCAACA+AGG + Chr8:31845183-31845202 MsG0880043865.01.T01:CDS 30.0%
GATTATATGAGTATCAAGGA+TGG + Chr8:31845651-31845670 MsG0880043865.01.T01:CDS 30.0%
GCAGAGTTAACATATGATTA+TGG + Chr8:31846836-31846855 MsG0880043865.01.T01:CDS 30.0%
GTATTTATGAACCATTCAAG+TGG + Chr8:31846588-31846607 MsG0880043865.01.T01:CDS 30.0%
GTGAAATAAGTGAAAAAAGC+AGG - Chr8:31846164-31846183 None:intergenic 30.0%
TCATGCATTCAAAGAAATGA+GGG + Chr8:31846275-31846294 MsG0880043865.01.T01:CDS 30.0%
TTACAATTGCAGCTTAAAGA+AGG - Chr8:31846224-31846243 None:intergenic 30.0%
TTCAACATTCTGATATACCT+TGG - Chr8:31846534-31846553 None:intergenic 30.0%
TTCATGCATTCAAAGAAATG+AGG + Chr8:31846274-31846293 MsG0880043865.01.T01:CDS 30.0%
TTCTTGGCACTTATAATTAG+AGG - Chr8:31846683-31846702 None:intergenic 30.0%
! ACTAAAAGATGATGGTGATA+GGG + Chr8:31845368-31845387 MsG0880043865.01.T01:CDS 30.0%
! TTATTTTCCGCATATAAGAC+TGG - Chr8:31846764-31846783 None:intergenic 30.0%
!! AACATGGATTGAACATGTTT+TGG - Chr8:31844967-31844986 None:intergenic 30.0%
!! ACTTTTATTTGTGAGTATGC+AGG + Chr8:31846491-31846510 MsG0880043865.01.T01:CDS 30.0%
!! AGTAATGCTTTGACTTGTAA+AGG + Chr8:31845507-31845526 MsG0880043865.01.T01:CDS 30.0%
!! GTAATGCTTTGACTTGTAAA+GGG + Chr8:31845508-31845527 MsG0880043865.01.T01:CDS 30.0%
!!! GGATGTTTTCTTTTTTCGAA+TGG + Chr8:31845584-31845603 MsG0880043865.01.T01:CDS 30.0%
AAAAATCGAGTATCACAGAC+TGG + Chr8:31846389-31846408 MsG0880043865.01.T01:CDS 35.0%
AATGATGTCGATGATGAGAA+GGG + Chr8:31846137-31846156 MsG0880043865.01.T01:CDS 35.0%
ACATCATTGACAAGTGATAC+TGG - Chr8:31846125-31846144 None:intergenic 35.0%
AGAAGTTATTAACAGAGCCA+AGG + Chr8:31846514-31846533 MsG0880043865.01.T01:CDS 35.0%
AGCTATATTTCCCACATTCT+TGG - Chr8:31846699-31846718 None:intergenic 35.0%
ATGAACAGTTCAAATCACCT+GGG - Chr8:31846259-31846278 None:intergenic 35.0%
CAAGATTCTTGGATTGAAAG+AGG + Chr8:31845942-31845961 MsG0880043865.01.T01:CDS 35.0%
CATTGGAGGAATATGTCTAA+GGG - Chr8:31846816-31846835 None:intergenic 35.0%
CTCTTTCAATCCAAGAATCT+TGG - Chr8:31845944-31845963 None:intergenic 35.0%
GAATTATGAACCTAGCTTAC+TGG + Chr8:31846610-31846629 MsG0880043865.01.T01:CDS 35.0%
GCACTTATAATTAGAGGAGA+TGG - Chr8:31846677-31846696 None:intergenic 35.0%
GCATTTCTTTCTCCTTCTAA+AGG - Chr8:31846897-31846916 None:intergenic 35.0%
GGTTCATAATTCCACTTGAA+TGG - Chr8:31846602-31846621 None:intergenic 35.0%
GGTTTGACGTATGAGTAAAA+TGG - Chr8:31845018-31845037 None:intergenic 35.0%
TAAGGGCAAAAAATGCAATG+TGG - Chr8:31846799-31846818 None:intergenic 35.0%
TCAAAGAGGTAATCTTGCTT+TGG + Chr8:31845815-31845834 MsG0880043865.01.T01:CDS 35.0%
TCATATGTTAACTCTGCCAT+TGG - Chr8:31846833-31846852 None:intergenic 35.0%
TGACGTTTGATTCAATTCGA+AGG + Chr8:31845412-31845431 MsG0880043865.01.T01:CDS 35.0%
TGCTAAAGTGACTCCAATAA+GGG + Chr8:31845143-31845162 MsG0880043865.01.T01:CDS 35.0%
TTCATCATGTGAACTCTTGT+AGG - Chr8:31845169-31845188 None:intergenic 35.0%
TTGACGTATGAGTAAAATGG+AGG - Chr8:31845015-31845034 None:intergenic 35.0%
! AAGGGTTTAAAACAAACACG+AGG + Chr8:31845526-31845545 MsG0880043865.01.T01:CDS 35.0%
! CACTAAAAGATGATGGTGAT+AGG + Chr8:31845367-31845386 MsG0880043865.01.T01:CDS 35.0%
! CATGTTCAATCCATGTTTTC+TGG + Chr8:31844970-31844989 MsG0880043865.01.T01:CDS 35.0%
! TCACCATCATCTTTTAGTGT+CGG - Chr8:31845366-31845385 None:intergenic 35.0%
! TGATAAACGAAAGCGTAGTA+CGG + Chr8:31845245-31845264 MsG0880043865.01.T01:CDS 35.0%
! TGTATATGGTGATGATACAG+AGG + Chr8:31845716-31845735 MsG0880043865.01.T01:CDS 35.0%
!! ATAAAAGTACCAGCACGTAT+AGG - Chr8:31846479-31846498 None:intergenic 35.0%
!! ATGGAAGTGTTCAGAACAAA+GGG + Chr8:31846425-31846444 MsG0880043865.01.T01:CDS 35.0%
!! GACTGGTTTAAAACAACACA+TGG + Chr8:31846406-31846425 MsG0880043865.01.T01:CDS 35.0%
!! TATAAGTTGGTAAGGTTACC+TGG + Chr8:31845990-31846009 MsG0880043865.01.T01:CDS 35.0%
!! TTTTGGAAGAGGAATGTGAT+GGG - Chr8:31845040-31845059 None:intergenic 35.0%
!!! GCATAAGCAATTTTTTGACC+AGG - Chr8:31846011-31846030 None:intergenic 35.0%
AAAATGGAGGAAACCCAGAA+GGG - Chr8:31845002-31845021 None:intergenic 40.0%
AACCCGACACTAAAAGATGA+TGG + Chr8:31845360-31845379 MsG0880043865.01.T01:CDS 40.0%
AAGCCGCTTATTCATGAATG+TGG + Chr8:31846338-31846357 MsG0880043865.01.T01:CDS 40.0%
ACAGGTGCTAAACTACGTAA+GGG - Chr8:31844940-31844959 None:intergenic 40.0%
ACTGATCAGAAGCTTCAAAG+AGG + Chr8:31845801-31845820 MsG0880043865.01.T01:CDS 40.0%
ACTGGCTGCCAAAAAACATT+TGG - Chr8:31846746-31846765 None:intergenic 40.0%
AGGAGAAAGAAATGCTTGTG+TGG + Chr8:31846902-31846921 MsG0880043865.01.T01:CDS 40.0%
ATAGCGACGATTATTCGGAA+GGG + Chr8:31845214-31845233 MsG0880043865.01.T01:CDS 40.0%
ATTGAAAGAGGGAAATCTGG+CGG + Chr8:31845954-31845973 MsG0880043865.01.T01:CDS 40.0%
CAATGATGTCGATGATGAGA+AGG + Chr8:31846136-31846155 MsG0880043865.01.T01:CDS 40.0%
CATGAACAGTTCAAATCACC+TGG - Chr8:31846260-31846279 None:intergenic 40.0%
CCATTGGAGGAATATGTCTA+AGG - Chr8:31846817-31846836 None:intergenic 40.0%
CCTTAGACATATTCCTCCAA+TGG + Chr8:31846814-31846833 MsG0880043865.01.T01:CDS 40.0%
CGAATGGAAATGTGTCTTGT+GGG + Chr8:31845600-31845619 MsG0880043865.01.T01:CDS 40.0%
CGTTTGATTCAATTCGAAGG+AGG + Chr8:31845415-31845434 MsG0880043865.01.T01:CDS 40.0%
CTGCTAAAGTGACTCCAATA+AGG + Chr8:31845142-31845161 MsG0880043865.01.T01:CDS 40.0%
CTGGCTGCCAAAAAACATTT+GGG - Chr8:31846745-31846764 None:intergenic 40.0%
CTTACATCTTCCAGTAAGCT+AGG - Chr8:31846623-31846642 None:intergenic 40.0%
GAAATGAATCAACAAGGCGA+TGG + Chr8:31845189-31845208 MsG0880043865.01.T01:CDS 40.0%
GAGTATCAAGGATGGATCTA+AGG + Chr8:31845659-31845678 MsG0880043865.01.T01:CDS 40.0%
GATGAAGTTAGAGTCATTCG+AGG + Chr8:31845858-31845877 MsG0880043865.01.T01:CDS 40.0%
GATTATGGAATTACCCATGC+TGG + Chr8:31846851-31846870 MsG0880043865.01.T01:CDS 40.0%
GATTATTCGGAAGGGTTTGT+AGG + Chr8:31845222-31845241 MsG0880043865.01.T01:CDS 40.0%
GGAGAAAGAAATGCTTGTGT+GGG + Chr8:31846903-31846922 MsG0880043865.01.T01:CDS 40.0%
GGTTTGCATGCTCAATCAAT+GGG + Chr8:31845621-31845640 MsG0880043865.01.T01:CDS 40.0%
TAAAATGGAGGAAACCCAGA+AGG - Chr8:31845003-31845022 None:intergenic 40.0%
TAGGAAAACACCGACACATA+GGG - Chr8:31846364-31846383 None:intergenic 40.0%
TATCAAGGATGGATCTAAGG+AGG + Chr8:31845662-31845681 MsG0880043865.01.T01:CDS 40.0%
TATGTTAACTCTGCCATTGG+AGG - Chr8:31846830-31846849 None:intergenic 40.0%
TCGAATGGAAATGTGTCTTG+TGG + Chr8:31845599-31845618 MsG0880043865.01.T01:CDS 40.0%
TGCACTAGACCAAAAGGTTT+CGG - Chr8:31846200-31846219 None:intergenic 40.0%
TGGAATACTTTCAACCCCAT+TGG - Chr8:31846105-31846124 None:intergenic 40.0%
TGGAGATAGCGACGATTATT+CGG + Chr8:31845209-31845228 MsG0880043865.01.T01:CDS 40.0%
TGGATTGAAAGAGGGAAATC+TGG + Chr8:31845951-31845970 MsG0880043865.01.T01:CDS 40.0%
TGGCTGCCAAAAAACATTTG+GGG - Chr8:31846744-31846763 None:intergenic 40.0%
TTTGGAAGAGGAATGTGATG+GGG - Chr8:31845039-31845058 None:intergenic 40.0%
! CACCATCATCTTTTAGTGTC+GGG - Chr8:31845365-31845384 None:intergenic 40.0%
! CTCAAAAACCCGAAACCTTT+TGG + Chr8:31846188-31846207 MsG0880043865.01.T01:CDS 40.0%
! CTGTGATACTCGATTTTTGC+AGG - Chr8:31846387-31846406 None:intergenic 40.0%
! CTTGGAAATTGGCTCAAAAG+TGG + Chr8:31846033-31846052 MsG0880043865.01.T01:CDS 40.0%
! GAAATTGGCTCAAAAGTGGA+AGG + Chr8:31846037-31846056 MsG0880043865.01.T01:CDS 40.0%
! GATACTCGATTTTTGCAGGT+AGG - Chr8:31846383-31846402 None:intergenic 40.0%
! GTTCAATCCATGTTTTCTGG+TGG + Chr8:31844973-31844992 MsG0880043865.01.T01:CDS 40.0%
! GTTGTTTCGTCAGGTGTATA+TGG + Chr8:31845702-31845721 MsG0880043865.01.T01:CDS 40.0%
! TGCTTATGCTGCTTGGAAAT+TGG + Chr8:31846022-31846041 MsG0880043865.01.T01:CDS 40.0%
!! CATGGAAGTGTTCAGAACAA+AGG + Chr8:31846424-31846443 MsG0880043865.01.T01:CDS 40.0%
!! CTTTTGGAAGAGGAATGTGA+TGG - Chr8:31845041-31845060 None:intergenic 40.0%
!! TCTTCAGGTTCTTTTGGAAG+AGG - Chr8:31845051-31845070 None:intergenic 40.0%
!!! GTTGCTCCCCAAATGTTTTT+TGG + Chr8:31846735-31846754 MsG0880043865.01.T01:CDS 40.0%
!!! TGAACATGTTTTGGCAACAC+AGG - Chr8:31844958-31844977 None:intergenic 40.0%
AACAAACACGAGGAGAAGAG+CGG + Chr8:31845536-31845555 MsG0880043865.01.T01:CDS 45.0%
AGAACAAAGGGTAGAGGTTG+GGG + Chr8:31846437-31846456 MsG0880043865.01.T01:CDS 45.0%
ATGAATGTGGCCCTATGTGT+CGG + Chr8:31846351-31846370 MsG0880043865.01.T01:CDS 45.0%
ATGCCAACTTGAAGAGTCGA+AGG + Chr8:31845440-31845459 MsG0880043865.01.T01:CDS 45.0%
ATTCTTGCTGACCTCTCCAA+TGG + Chr8:31846086-31846105 MsG0880043865.01.T01:CDS 45.0%
CACAGGTGCTAAACTACGTA+AGG - Chr8:31844941-31844960 None:intergenic 45.0%
CAGAACAAAGGGTAGAGGTT+GGG + Chr8:31846436-31846455 MsG0880043865.01.T01:CDS 45.0%
GAACTCTTGTAGGCCCTTAT+TGG - Chr8:31845159-31845178 None:intergenic 45.0%
GATAGCGACGATTATTCGGA+AGG + Chr8:31845213-31845232 MsG0880043865.01.T01:CDS 45.0%
GCACTAGACCAAAAGGTTTC+GGG - Chr8:31846199-31846218 None:intergenic 45.0%
GGGCCACATTCATGAATAAG+CGG - Chr8:31846344-31846363 None:intergenic 45.0%
GGGTTTGCATGCTCAATCAA+TGG + Chr8:31845620-31845639 MsG0880043865.01.T01:CDS 45.0%
GGTGGTACGAGTTCTTATGT+TGG + Chr8:31845333-31845352 MsG0880043865.01.T01:CDS 45.0%
GTAGGAAAACACCGACACAT+AGG - Chr8:31846365-31846384 None:intergenic 45.0%
GTGTTCAGAACAAAGGGTAG+AGG + Chr8:31846431-31846450 MsG0880043865.01.T01:CDS 45.0%
GTTCCTTCGACTCTTCAAGT+TGG - Chr8:31845446-31845465 None:intergenic 45.0%
TACTTTCAACCCCATTGGAG+AGG - Chr8:31846100-31846119 None:intergenic 45.0%
TCAGAACAAAGGGTAGAGGT+TGG + Chr8:31846435-31846454 MsG0880043865.01.T01:CDS 45.0%
TGGATCTAAGGAGGATACTG+TGG + Chr8:31845671-31845690 MsG0880043865.01.T01:CDS 45.0%
TTCTTGCTGACCTCTCCAAT+GGG + Chr8:31846087-31846106 MsG0880043865.01.T01:CDS 45.0%
TTGCATGCTCAATCAATGGG+TGG + Chr8:31845624-31845643 MsG0880043865.01.T01:CDS 45.0%
! AGGGTATCCACCAGAAAACA+TGG - Chr8:31844983-31845002 None:intergenic 45.0%
! TTGGCAGCCAGTCTTATATG+CGG + Chr8:31846754-31846773 MsG0880043865.01.T01:CDS 45.0%
! TTTCTGGTGGATACCCTTCT+GGG + Chr8:31844986-31845005 MsG0880043865.01.T01:CDS 45.0%
!! GGGGTTTCTTCAGGTTCTTT+TGG - Chr8:31845057-31845076 None:intergenic 45.0%
!! TTTTCTGGTGGATACCCTTC+TGG + Chr8:31844985-31845004 MsG0880043865.01.T01:CDS 45.0%
ACAAACACGAGGAGAAGAGC+GGG + Chr8:31845537-31845556 MsG0880043865.01.T01:CDS 50.0%
ACACTGGATCCTATACGTGC+TGG + Chr8:31846467-31846486 MsG0880043865.01.T01:CDS 50.0%
ACATCCCCAATCTCAATCCC+AGG - Chr8:31845570-31845589 None:intergenic 50.0%
ATTACCCATGCTGGTCATGC+TGG + Chr8:31846860-31846879 MsG0880043865.01.T01:CDS 50.0%
CAAAGTAGCCGAGAAAACGC+CGG + Chr8:31845086-31845105 MsG0880043865.01.T01:CDS 50.0%
GAACAAAGGGTAGAGGTTGG+GGG + Chr8:31846438-31846457 MsG0880043865.01.T01:CDS 50.0%
GAACTCGTACCACCAACAAC+CGG - Chr8:31845327-31845346 None:intergenic 50.0%
GAAGAACAAAACTCGCGAGC+CGG + Chr8:31845305-31845324 MsG0880043865.01.T01:CDS 50.0%
GAAGGCTGCACTAGACCAAA+AGG - Chr8:31846206-31846225 None:intergenic 50.0%
GAGGTAGCAGTGCCTTTAGA+AGG + Chr8:31846882-31846901 MsG0880043865.01.T01:CDS 50.0%
GCAGGTTCCTGTACAAGGAA+TGG + Chr8:31846059-31846078 MsG0880043865.01.T01:CDS 50.0%
GCATCAAGAGGGGTTTCTTC+AGG - Chr8:31845066-31845085 None:intergenic 50.0%
TCTTGCTGACCTCTCCAATG+GGG + Chr8:31846088-31846107 MsG0880043865.01.T01:CDS 50.0%
TGGTGCCTGGGATTGAGATT+GGG + Chr8:31845562-31845581 MsG0880043865.01.T01:CDS 50.0%
TGTAACACAGCATGTGTCCC+AGG + Chr8:31846239-31846258 MsG0880043865.01.T01:CDS 50.0%
TTGGCTCAAAAGTGGAAGGC+AGG + Chr8:31846041-31846060 MsG0880043865.01.T01:CDS 50.0%
! CGGCTACTTTGGCATCAAGA+GGG - Chr8:31845077-31845096 None:intergenic 50.0%
! CTTTGGACAGAAGTGCACAG+CGG + Chr8:31845832-31845851 MsG0880043865.01.T01:CDS 50.0%
! GCGTTAAGCGTTGTTTCGTC+AGG + Chr8:31845693-31845712 MsG0880043865.01.T01:CDS 50.0%
! GGAGTCACTTTAGCAGCAAC+AGG - Chr8:31845138-31845157 None:intergenic 50.0%
! GGCTACTTTGGCATCAAGAG+GGG - Chr8:31845076-31845095 None:intergenic 50.0%
! TCGGCTACTTTGGCATCAAG+AGG - Chr8:31845078-31845097 None:intergenic 50.0%
! TGCTTTCACCGGCGTTTTCT+CGG - Chr8:31845097-31845116 None:intergenic 50.0%
!! GCAAAGTGCCGTGGTTTCTT+TGG + Chr8:31846929-31846948 MsG0880043865.01.T01:CDS 50.0%
!! TGCACTTGCTATCAAGCGTG+CGG + Chr8:31845473-31845492 MsG0880043865.01.T01:CDS 50.0%
AAAACTCGCGAGCCGGTTGT+TGG + Chr8:31845312-31845331 MsG0880043865.01.T01:CDS 55.0%
ACCTCCAGCATGACCAGCAT+GGG - Chr8:31846867-31846886 None:intergenic 55.0%
GAAAGAGGGAAATCTGGCGG+TGG + Chr8:31845957-31845976 MsG0880043865.01.T01:CDS 55.0%
GGAAGGCAGGTTCCTGTACA+AGG + Chr8:31846054-31846073 MsG0880043865.01.T01:CDS 55.0%
GGTGCCTGGGATTGAGATTG+GGG + Chr8:31845563-31845582 MsG0880043865.01.T01:CDS 55.0%
GTGGTGCCTGGGATTGAGAT+TGG + Chr8:31845561-31845580 MsG0880043865.01.T01:CDS 55.0%
TACCTCCAGCATGACCAGCA+TGG - Chr8:31846868-31846887 None:intergenic 55.0%
! CGGCGTTTTCTCGGCTACTT+TGG - Chr8:31845088-31845107 None:intergenic 55.0%
!! TGAGCTGCTGCTGCTTTCAC+CGG - Chr8:31845108-31845127 None:intergenic 55.0%
ACCCATGCTGGTCATGCTGG+AGG + Chr8:31846863-31846882 MsG0880043865.01.T01:CDS 60.0%
AGGTTGGGGGCTTCGAACAC+TGG + Chr8:31846451-31846470 MsG0880043865.01.T01:CDS 60.0%
!! TGTGGGTCAGCAAAGTGCCG+TGG + Chr8:31846920-31846939 MsG0880043865.01.T01:CDS 60.0%
ACTCGCGAGCCGGTTGTTGG+TGG + Chr8:31845315-31845334 MsG0880043865.01.T01:CDS 65.0%
AGAAGAGCGGGCGTGGTGCC+TGG + Chr8:31845549-31845568 MsG0880043865.01.T01:CDS 70.0%
CACGAGGAGAAGAGCGGGCG+TGG + Chr8:31845542-31845561 MsG0880043865.01.T01:CDS 70.0%
GAAGAGCGGGCGTGGTGCCT+GGG + Chr8:31845550-31845569 MsG0880043865.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr8 gene 31844871 31846955 31844871 ID=MsG0880043865.01;Name=MsG0880043865.01
Chr8 mRNA 31844871 31846955 31844871 ID=MsG0880043865.01.T01;Parent=MsG0880043865.01;Name=MsG0880043865.01.T01;_AED=0.36;_eAED=0.36;_QI=0|-1|0|1|-1|1|1|0|694
Chr8 exon 31844871 31846955 31844871 ID=MsG0880043865.01.T01:exon:9678;Parent=MsG0880043865.01.T01
Chr8 CDS 31844871 31846955 31844871 ID=MsG0880043865.01.T01:cds;Parent=MsG0880043865.01.T01
Gene Sequence

>MsG0880043865.01.T01

ATGGAAGAACACAACAACAACACTGCTTCAGATTCATTTGACAAATCTAAGATTGTTGAAGTCAAACCCTTACGTAGTTTAGCACCTGTGTTGCCAAAACATGTTCAATCCATGTTTTCTGGTGGATACCCTTCTGGGTTTCCTCCATTTTACTCATACGTCAAACCCCATCACATTCCTCTTCCAAAAGAACCTGAAGAAACCCCTCTTGATGCCAAAGTAGCCGAGAAAACGCCGGTGAAAGCAGCAGCAGCTCATGACACTCCTGTTGCTGCTAAAGTGACTCCAATAAGGGCCTACAAGAGTTCACATGATGAAGAAATGAATCAACAAGGCGATGGAGATAGCGACGATTATTCGGAAGGGTTTGTAGGTGATAAACGAAAGCGTAGTACGGATAATATTGAGAATTGCAAAGAGTTTCTTAAAAGGAAGAAGAACAAAACTCGCGAGCCGGTTGTTGGTGGTACGAGTTCTTATGTTGGTGTTAACCCGACACTAAAAGATGATGGTGATAGGGAGTCAGTTAATCATGTGCTTATGACGTTTGATTCAATTCGAAGGAGGCTATGCCAACTTGAAGAGTCGAAGGAACTAAACAATGCACTTGCTATCAAGCGTGCGGATCTAAGAGCGAGTAATGCTTTGACTTGTAAAGGGTTTAAAACAAACACGAGGAGAAGAGCGGGCGTGGTGCCTGGGATTGAGATTGGGGATGTTTTCTTTTTTCGAATGGAAATGTGTCTTGTGGGTTTGCATGCTCAATCAATGGGTGGAATTGATTATATGAGTATCAAGGATGGATCTAAGGAGGATACTGTGGCGTTAAGCGTTGTTTCGTCAGGTGTATATGGTGATGATACAGAGGATAATAATGTTTTAATTTATAGTGGTCAGGGTGAGAATTTCAACAAGAAAGATAAACATGTGACTGATCAGAAGCTTCAAAGAGGTAATCTTGCTTTGGACAGAAGTGCACAGCGGCACGATGAAGTTAGAGTCATTCGAGGCGTGAGAGATCCTGTGAATAGAAGTTCAAAAATCTATATGTATGATGGTTTATATAAAATCCAAGATTCTTGGATTGAAAGAGGGAAATCTGGCGGTGGTATATTTAAGTATAAGTTGGTAAGGTTACCTGGTCAAAAAATTGCTTATGCTGCTTGGAAATTGGCTCAAAAGTGGAAGGCAGGTTCCTGTACAAGGAATGGTTTTATTCTTGCTGACCTCTCCAATGGGGTTGAAAGTATTCCAGTATCACTTGTCAATGATGTCGATGATGAGAAGGGTCCTGCTTTTTTCACTTATTTCACGTCTCTCAAAAACCCGAAACCTTTTGGTCTAGTGCAGCCTTCTTTAAGCTGCAATTGTAACACAGCATGTGTCCCAGGTGATTTGAACTGTTCATGCATTCAAAGAAATGAGGGTGATTTTCCGTATACTGCAAATAGTATTCTAGTGAGTCGGAAGCCGCTTATTCATGAATGTGGCCCTATGTGTCGGTGTTTTCCTACCTGCAAAAATCGAGTATCACAGACTGGTTTAAAACAACACATGGAAGTGTTCAGAACAAAGGGTAGAGGTTGGGGGCTTCGAACACTGGATCCTATACGTGCTGGTACTTTTATTTGTGAGTATGCAGGAGAAGTTATTAACAGAGCCAAGGTATATCAGAATGTTGAAGGAGATAATGACGAATATGTTTTTGATACAAGCCGTATTTATGAACCATTCAAGTGGAATTATGAACCTAGCTTACTGGAAGATGTAAGTTCAAATGTATGTAGTGAGGATTATACTATACCATCTCCTCTAATTATAAGTGCCAAGAATGTGGGAAATATAGCTAGATTCATGAATCATAGTTGCTCCCCAAATGTTTTTTGGCAGCCAGTCTTATATGCGGAAAATAATCAATCCTTTATCCACATTGCATTTTTTGCCCTTAGACATATTCCTCCAATGGCAGAGTTAACATATGATTATGGAATTACCCATGCTGGTCATGCTGGAGGTAGCAGTGCCTTTAGAAGGAGAAAGAAATGCTTGTGTGGGTCAGCAAAGTGCCGTGGTTTCTTTGGTTAA

Protein sequence

>MsG0880043865.01.T01

MEEHNNNTASDSFDKSKIVEVKPLRSLAPVLPKHVQSMFSGGYPSGFPPFYSYVKPHHIPLPKEPEETPLDAKVAEKTPVKAAAAHDTPVAAKVTPIRAYKSSHDEEMNQQGDGDSDDYSEGFVGDKRKRSTDNIENCKEFLKRKKNKTREPVVGGTSSYVGVNPTLKDDGDRESVNHVLMTFDSIRRRLCQLEESKELNNALAIKRADLRASNALTCKGFKTNTRRRAGVVPGIEIGDVFFFRMEMCLVGLHAQSMGGIDYMSIKDGSKEDTVALSVVSSGVYGDDTEDNNVLIYSGQGENFNKKDKHVTDQKLQRGNLALDRSAQRHDEVRVIRGVRDPVNRSSKIYMYDGLYKIQDSWIERGKSGGGIFKYKLVRLPGQKIAYAAWKLAQKWKAGSCTRNGFILADLSNGVESIPVSLVNDVDDEKGPAFFTYFTSLKNPKPFGLVQPSLSCNCNTACVPGDLNCSCIQRNEGDFPYTANSILVSRKPLIHECGPMCRCFPTCKNRVSQTGLKQHMEVFRTKGRGWGLRTLDPIRAGTFICEYAGEVINRAKVYQNVEGDNDEYVFDTSRIYEPFKWNYEPSLLEDVSSNVCSEDYTIPSPLIISAKNVGNIARFMNHSCSPNVFWQPVLYAENNQSFIHIAFFALRHIPPMAELTYDYGITHAGHAGGSSAFRRRKKCLCGSAKCRGFFG*