Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880043865.01.T01 | XP_024628450.1 | 96.501 | 686 | 22 | 1 | 11 | 694 | 3 | 688 | 0 | 1387 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880043865.01.T01 | Q9C5P4 | 49.42 | 690 | 305 | 12 | 13 | 694 | 16 | 669 | 0 | 655 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880043865.01.T01 | A0A072TQS3 | 96.501 | 686 | 22 | 1 | 11 | 694 | 3 | 688 | 0.0 | 1387 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0180000494.01 | MsG0880043865.01 | 0.810109 | 1.357145e-50 | 8.110682e-48 |
MsG0180000555.01 | MsG0880043865.01 | 0.821333 | 4.268243e-53 | 3.462398e-50 |
MsG0180000741.01 | MsG0880043865.01 | 0.824211 | 9.125443e-54 | 8.030788e-51 |
MsG0180004598.01 | MsG0880043865.01 | 0.800763 | 1.237412e-48 | 5.809211e-46 |
MsG0180004797.01 | MsG0880043865.01 | 0.804073 | 2.573795e-49 | 1.314697e-46 |
MsG0180005228.01 | MsG0880043865.01 | 0.818883 | 1.553870e-52 | 1.177542e-49 |
MsG0180005786.01 | MsG0880043865.01 | 0.806973 | 6.341060e-50 | 3.489412e-47 |
MsG0180006128.01 | MsG0880043865.01 | 0.807296 | 5.418685e-50 | 3.007007e-47 |
MsG0880042329.01 | MsG0880043865.01 | 0.806415 | 8.317518e-50 | 4.511761e-47 |
MsG0880043116.01 | MsG0880043865.01 | 0.817985 | 2.482557e-52 | 1.835144e-49 |
MsG0880043522.01 | MsG0880043865.01 | 0.821713 | 3.488854e-53 | 2.860408e-50 |
MsG0880043865.01 | MsG0880044732.01 | 0.821818 | 3.297680e-53 | 2.711905e-50 |
MsG0880043865.01 | MsG0880046643.01 | 0.820045 | 8.439471e-53 | 6.605902e-50 |
MsG0280010816.01 | MsG0880043865.01 | 0.820652 | 6.125137e-53 | 4.874905e-50 |
MsG0280010976.01 | MsG0880043865.01 | 0.824617 | 7.325829e-54 | 6.523328e-51 |
MsG0680034757.01 | MsG0880043865.01 | 0.823469 | 1.361824e-53 | 1.173581e-50 |
MsG0480019289.01 | MsG0880043865.01 | 0.801363 | 9.325965e-49 | 4.445468e-46 |
MsG0480021900.01 | MsG0880043865.01 | 0.816837 | 4.500519e-52 | 3.224048e-49 |
MsG0480022169.01 | MsG0880043865.01 | 0.802529 | 5.373635e-49 | 2.638299e-46 |
MsG0480023460.01 | MsG0880043865.01 | 0.810948 | 8.941942e-51 | 5.464520e-48 |
MsG0580024960.01 | MsG0880043865.01 | 0.801795 | 7.605341e-49 | 3.665004e-46 |
MsG0580025237.01 | MsG0880043865.01 | 0.802788 | 4.751085e-49 | 2.348244e-46 |
MsG0380015614.01 | MsG0880043865.01 | 0.817084 | 3.961225e-52 | 2.856892e-49 |
MsG0380015702.01 | MsG0880043865.01 | 0.818580 | 1.819846e-52 | 1.367543e-49 |
MsG0380016561.01 | MsG0880043865.01 | 0.810302 | 1.233333e-50 | 7.407317e-48 |
MsG0380016753.01 | MsG0880043865.01 | 0.818048 | 2.402516e-52 | 1.779029e-49 |
MsG0580029639.01 | MsG0880043865.01 | 0.807273 | 5.478961e-50 | 3.038681e-47 |
MsG0280007048.01 | MsG0880043865.01 | 0.815277 | 1.004044e-51 | 6.891810e-49 |
MsG0280007087.01 | MsG0880043865.01 | 0.822332 | 2.506701e-53 | 2.091871e-50 |
MsG0280010239.01 | MsG0880043865.01 | 0.814403 | 1.568601e-51 | 1.051546e-48 |
MsG0780036548.01 | MsG0880043865.01 | 0.819491 | 1.129608e-52 | 8.705663e-50 |
MsG0780036773.01 | MsG0880043865.01 | 0.800814 | 1.207742e-48 | 5.677302e-46 |
MsG0780037975.01 | MsG0880043865.01 | 0.803877 | 2.825894e-49 | 1.436272e-46 |
PPI
Gene1 | Gene2 | Type |
---|---|---|
MsG0380017369.01 | MsG0880043865.01 | PPI |
MsG0880043865.01 | MsG0380011977.01 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880043865.01.T01 | MTR_8g042750 | 96.501 | 686 | 22 | 1 | 11 | 694 | 3 | 688 | 0.0 | 1387 |
MsG0880043865.01.T01 | MTR_3g011440 | 60.292 | 685 | 233 | 8 | 12 | 693 | 15 | 663 | 0.0 | 849 |
MsG0880043865.01.T01 | MTR_7g088370 | 45.293 | 733 | 329 | 15 | 3 | 693 | 2 | 704 | 0.0 | 616 |
MsG0880043865.01.T01 | MTR_5g013420 | 39.867 | 602 | 325 | 14 | 102 | 693 | 514 | 1088 | 2.60e-126 | 401 |
MsG0880043865.01.T01 | MTR_5g013420 | 39.833 | 600 | 324 | 14 | 102 | 691 | 514 | 1086 | 3.90e-125 | 398 |
MsG0880043865.01.T01 | MTR_4g010830 | 38.850 | 574 | 316 | 14 | 128 | 691 | 429 | 977 | 8.31e-115 | 369 |
MsG0880043865.01.T01 | MTR_8g070070 | 41.556 | 450 | 245 | 12 | 226 | 665 | 317 | 758 | 1.46e-105 | 338 |
MsG0880043865.01.T01 | MTR_1g035420 | 39.960 | 503 | 279 | 14 | 173 | 665 | 158 | 647 | 8.42e-105 | 333 |
MsG0880043865.01.T01 | MTR_8g070075 | 40.089 | 449 | 251 | 10 | 226 | 664 | 310 | 750 | 8.75e-104 | 333 |
MsG0880043865.01.T01 | MTR_8g071030 | 39.741 | 463 | 251 | 9 | 218 | 665 | 289 | 738 | 1.27e-102 | 330 |
MsG0880043865.01.T01 | MTR_4g010550 | 38.990 | 495 | 252 | 14 | 200 | 691 | 14 | 461 | 1.34e-101 | 319 |
MsG0880043865.01.T01 | MTR_1g035400 | 36.822 | 516 | 286 | 16 | 173 | 665 | 68 | 566 | 2.54e-92 | 298 |
MsG0880043865.01.T01 | MTR_6g044690 | 36.571 | 525 | 280 | 17 | 173 | 664 | 60 | 564 | 3.15e-90 | 293 |
MsG0880043865.01.T01 | MTR_0376s0030 | 36.207 | 522 | 290 | 16 | 170 | 663 | 55 | 561 | 2.05e-86 | 283 |
MsG0880043865.01.T01 | MTR_6g061270 | 34.902 | 510 | 293 | 13 | 206 | 690 | 195 | 690 | 7.52e-85 | 282 |
MsG0880043865.01.T01 | MTR_7g084090 | 34.442 | 511 | 295 | 13 | 206 | 690 | 257 | 753 | 1.63e-84 | 282 |
MsG0880043865.01.T01 | MTR_6g061200 | 34.000 | 500 | 282 | 12 | 206 | 690 | 195 | 661 | 3.44e-80 | 269 |
MsG0880043865.01.T01 | MTR_6g043960 | 33.678 | 484 | 274 | 16 | 192 | 664 | 35 | 482 | 5.49e-71 | 239 |
MsG0880043865.01.T01 | MTR_1g048950 | 33.952 | 539 | 294 | 12 | 173 | 691 | 34 | 530 | 1.78e-69 | 237 |
MsG0880043865.01.T01 | MTR_7g084090 | 35.433 | 381 | 221 | 10 | 206 | 570 | 257 | 628 | 7.56e-64 | 224 |
MsG0880043865.01.T01 | MTR_2g054460 | 32.308 | 520 | 260 | 18 | 173 | 664 | 9 | 464 | 8.50e-63 | 216 |
MsG0880043865.01.T01 | MTR_7g445710 | 31.047 | 554 | 271 | 23 | 162 | 689 | 70 | 538 | 9.95e-61 | 213 |
MsG0880043865.01.T01 | MTR_7g445530 | 31.238 | 525 | 255 | 21 | 162 | 662 | 70 | 512 | 1.11e-57 | 204 |
MsG0880043865.01.T01 | MTR_7g450730 | 29.511 | 532 | 273 | 17 | 162 | 689 | 67 | 500 | 1.51e-52 | 189 |
MsG0880043865.01.T01 | MTR_7g052480 | 33.788 | 293 | 181 | 6 | 405 | 690 | 266 | 552 | 1.92e-42 | 162 |
MsG0880043865.01.T01 | MTR_1g080340 | 28.743 | 334 | 170 | 8 | 407 | 690 | 267 | 582 | 3.93e-34 | 138 |
MsG0880043865.01.T01 | MTR_5g018850 | 31.532 | 333 | 161 | 12 | 398 | 691 | 1200 | 1504 | 3.65e-30 | 128 |
MsG0880043865.01.T01 | MTR_7g098390 | 28.739 | 341 | 174 | 10 | 401 | 692 | 380 | 700 | 3.49e-29 | 124 |
MsG0880043865.01.T01 | MTR_8g078490 | 28.571 | 329 | 177 | 8 | 396 | 691 | 947 | 1250 | 7.80e-29 | 124 |
MsG0880043865.01.T01 | MTR_1g069570 | 28.274 | 336 | 172 | 9 | 407 | 692 | 428 | 744 | 1.02e-28 | 122 |
MsG0880043865.01.T01 | MTR_8g078505 | 30.368 | 326 | 172 | 11 | 392 | 689 | 235 | 533 | 1.63e-27 | 117 |
MsG0880043865.01.T01 | MTR_4g132610 | 34.419 | 215 | 118 | 5 | 478 | 691 | 852 | 1044 | 1.79e-27 | 119 |
MsG0880043865.01.T01 | MTR_7g445600 | 33.987 | 153 | 61 | 2 | 510 | 662 | 243 | 355 | 7.41e-23 | 101 |
MsG0880043865.01.T01 | MTR_7g445600 | 32.386 | 176 | 96 | 8 | 162 | 335 | 66 | 220 | 1.30e-11 | 67.0 |
MsG0880043865.01.T01 | MTR_1g098000 | 31.401 | 207 | 92 | 6 | 495 | 694 | 72 | 235 | 9.01e-21 | 96.7 |
MsG0880043865.01.T01 | MTR_1g098370 | 31.401 | 207 | 92 | 6 | 495 | 694 | 75 | 238 | 9.77e-21 | 96.7 |
MsG0880043865.01.T01 | MTR_1g069570 | 26.894 | 264 | 129 | 7 | 407 | 621 | 428 | 676 | 7.70e-18 | 88.2 |
MsG0880043865.01.T01 | MTR_0071s0100 | 30.374 | 214 | 108 | 6 | 481 | 694 | 177 | 349 | 3.03e-16 | 81.6 |
MsG0880043865.01.T01 | MTR_6g059310 | 27.094 | 203 | 110 | 5 | 492 | 694 | 87 | 251 | 5.23e-14 | 74.3 |
MsG0880043865.01.T01 | MTR_6g059310 | 27.094 | 203 | 110 | 5 | 492 | 694 | 87 | 251 | 6.04e-14 | 74.3 |
MsG0880043865.01.T01 | MTR_1g064770 | 44.444 | 63 | 34 | 1 | 490 | 551 | 28 | 90 | 6.74e-12 | 62.4 |
MsG0880043865.01.T01 | MTR_7g445810 | 30.653 | 199 | 109 | 9 | 169 | 361 | 91 | 266 | 2.79e-11 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880043865.01.T01 | AT1G73100 | 49.420 | 690 | 305 | 12 | 13 | 694 | 16 | 669 | 0.0 | 655 |
MsG0880043865.01.T01 | AT5G04940 | 47.076 | 701 | 311 | 9 | 14 | 694 | 10 | 670 | 0.0 | 650 |
MsG0880043865.01.T01 | AT5G04940 | 47.076 | 701 | 311 | 9 | 14 | 694 | 10 | 670 | 0.0 | 650 |
MsG0880043865.01.T01 | AT1G17770 | 40.446 | 717 | 366 | 21 | 13 | 693 | 1 | 692 | 1.41e-153 | 461 |
MsG0880043865.01.T01 | AT2G24740 | 46.211 | 541 | 235 | 13 | 168 | 694 | 257 | 755 | 7.00e-147 | 446 |
MsG0880043865.01.T01 | AT2G35160 | 39.591 | 538 | 271 | 16 | 165 | 691 | 261 | 755 | 3.71e-109 | 348 |
MsG0880043865.01.T01 | AT2G35160 | 39.591 | 538 | 271 | 16 | 165 | 691 | 297 | 791 | 9.62e-109 | 348 |
MsG0880043865.01.T01 | AT2G35160 | 39.591 | 538 | 271 | 16 | 165 | 691 | 297 | 791 | 9.62e-109 | 348 |
MsG0880043865.01.T01 | AT2G35160 | 39.591 | 538 | 271 | 16 | 165 | 691 | 297 | 791 | 9.62e-109 | 348 |
MsG0880043865.01.T01 | AT2G35160 | 39.591 | 538 | 271 | 16 | 165 | 691 | 297 | 791 | 9.62e-109 | 348 |
MsG0880043865.01.T01 | AT4G13460 | 38.142 | 506 | 289 | 12 | 173 | 665 | 145 | 639 | 2.66e-107 | 340 |
MsG0880043865.01.T01 | AT4G13460 | 38.142 | 506 | 289 | 12 | 173 | 665 | 145 | 639 | 2.66e-107 | 340 |
MsG0880043865.01.T01 | AT2G22740 | 38.302 | 530 | 302 | 12 | 173 | 690 | 270 | 786 | 2.65e-106 | 341 |
MsG0880043865.01.T01 | AT2G22740 | 38.302 | 530 | 302 | 12 | 173 | 690 | 270 | 786 | 2.65e-106 | 341 |
MsG0880043865.01.T01 | AT2G33290 | 37.376 | 503 | 294 | 11 | 173 | 665 | 149 | 640 | 3.30e-101 | 324 |
MsG0880043865.01.T01 | AT2G33290 | 37.376 | 503 | 294 | 11 | 173 | 665 | 149 | 640 | 3.30e-101 | 324 |
MsG0880043865.01.T01 | AT2G33290 | 37.376 | 503 | 294 | 11 | 173 | 665 | 149 | 640 | 3.30e-101 | 324 |
MsG0880043865.01.T01 | AT2G33290 | 37.376 | 503 | 294 | 11 | 173 | 665 | 149 | 640 | 3.30e-101 | 324 |
MsG0880043865.01.T01 | AT5G13960 | 35.185 | 486 | 284 | 12 | 226 | 690 | 11 | 486 | 8.06e-85 | 276 |
MsG0880043865.01.T01 | AT5G13960 | 34.646 | 508 | 299 | 13 | 205 | 690 | 124 | 620 | 1.93e-84 | 279 |
MsG0880043865.01.T01 | AT5G47150 | 41.509 | 212 | 117 | 4 | 173 | 382 | 118 | 324 | 8.63e-44 | 160 |
MsG0880043865.01.T01 | AT2G05900 | 42.857 | 196 | 108 | 3 | 247 | 440 | 1 | 194 | 6.73e-42 | 155 |
MsG0880043865.01.T01 | AT2G05900 | 51.163 | 86 | 33 | 1 | 609 | 694 | 236 | 312 | 1.44e-21 | 96.7 |
MsG0880043865.01.T01 | AT3G04380 | 28.060 | 335 | 170 | 8 | 407 | 690 | 144 | 458 | 5.19e-37 | 145 |
MsG0880043865.01.T01 | AT3G04380 | 28.060 | 335 | 170 | 8 | 407 | 690 | 144 | 458 | 5.52e-37 | 145 |
MsG0880043865.01.T01 | AT3G04380 | 28.060 | 335 | 170 | 8 | 407 | 690 | 117 | 431 | 5.61e-37 | 145 |
MsG0880043865.01.T01 | AT3G04380 | 28.060 | 335 | 170 | 8 | 407 | 690 | 128 | 442 | 5.93e-37 | 145 |
MsG0880043865.01.T01 | AT3G04380 | 28.060 | 335 | 170 | 8 | 407 | 690 | 101 | 415 | 6.65e-37 | 144 |
MsG0880043865.01.T01 | AT3G04380 | 28.060 | 335 | 170 | 8 | 407 | 690 | 117 | 431 | 6.92e-37 | 144 |
MsG0880043865.01.T01 | AT5G47160 | 41.410 | 227 | 122 | 6 | 156 | 378 | 188 | 407 | 6.05e-35 | 138 |
MsG0880043865.01.T01 | AT5G47160 | 41.410 | 227 | 122 | 6 | 156 | 378 | 188 | 407 | 6.05e-35 | 138 |
MsG0880043865.01.T01 | AT5G47160 | 41.410 | 227 | 122 | 6 | 156 | 378 | 188 | 407 | 6.05e-35 | 138 |
MsG0880043865.01.T01 | AT1G04050 | 28.382 | 377 | 183 | 11 | 366 | 690 | 274 | 615 | 2.77e-30 | 127 |
MsG0880043865.01.T01 | AT1G04050 | 28.912 | 377 | 181 | 12 | 366 | 690 | 378 | 719 | 3.05e-30 | 127 |
MsG0880043865.01.T01 | AT1G04050 | 28.912 | 377 | 181 | 12 | 366 | 690 | 378 | 719 | 3.05e-30 | 127 |
MsG0880043865.01.T01 | AT2G23740 | 30.818 | 318 | 168 | 12 | 404 | 693 | 1081 | 1374 | 2.32e-29 | 125 |
MsG0880043865.01.T01 | AT2G23740 | 30.818 | 318 | 168 | 12 | 404 | 693 | 1088 | 1381 | 2.54e-29 | 125 |
MsG0880043865.01.T01 | AT2G23740 | 30.818 | 318 | 168 | 12 | 404 | 693 | 1088 | 1381 | 2.54e-29 | 125 |
MsG0880043865.01.T01 | AT2G23740 | 30.818 | 318 | 168 | 12 | 404 | 693 | 1088 | 1381 | 2.54e-29 | 125 |
MsG0880043865.01.T01 | AT5G43990 | 26.429 | 420 | 209 | 14 | 321 | 690 | 313 | 682 | 3.63e-29 | 124 |
MsG0880043865.01.T01 | AT5G43990 | 26.429 | 420 | 209 | 14 | 321 | 690 | 313 | 682 | 3.63e-29 | 124 |
MsG0880043865.01.T01 | AT5G43990 | 26.429 | 420 | 209 | 14 | 321 | 690 | 313 | 682 | 3.63e-29 | 124 |
MsG0880043865.01.T01 | AT5G43990 | 26.429 | 420 | 209 | 14 | 321 | 690 | 313 | 682 | 3.63e-29 | 124 |
MsG0880043865.01.T01 | AT5G43990 | 26.429 | 420 | 209 | 14 | 321 | 690 | 336 | 705 | 4.27e-29 | 124 |
MsG0880043865.01.T01 | AT5G43990 | 26.429 | 420 | 209 | 14 | 321 | 690 | 336 | 705 | 4.27e-29 | 124 |
MsG0880043865.01.T01 | AT5G43990 | 26.429 | 420 | 209 | 14 | 321 | 690 | 333 | 702 | 4.83e-29 | 124 |
MsG0880043865.01.T01 | AT5G43990 | 26.429 | 420 | 209 | 14 | 321 | 690 | 333 | 702 | 4.83e-29 | 124 |
MsG0880043865.01.T01 | AT5G43990 | 26.429 | 420 | 209 | 14 | 321 | 690 | 333 | 702 | 4.83e-29 | 124 |
MsG0880043865.01.T01 | AT5G43990 | 26.429 | 420 | 209 | 14 | 321 | 690 | 333 | 702 | 4.83e-29 | 124 |
MsG0880043865.01.T01 | AT5G43990 | 26.429 | 420 | 209 | 14 | 321 | 690 | 356 | 725 | 5.58e-29 | 123 |
MsG0880043865.01.T01 | AT5G43990 | 26.429 | 420 | 209 | 14 | 321 | 690 | 356 | 725 | 5.58e-29 | 123 |
MsG0880043865.01.T01 | AT5G43990 | 26.849 | 365 | 181 | 11 | 376 | 690 | 285 | 613 | 5.80e-29 | 123 |
MsG0880043865.01.T01 | AT5G43990 | 26.429 | 420 | 209 | 14 | 321 | 690 | 264 | 633 | 6.50e-29 | 123 |
MsG0880043865.01.T01 | AT5G43990 | 26.429 | 420 | 209 | 14 | 321 | 690 | 264 | 633 | 6.50e-29 | 123 |
MsG0880043865.01.T01 | AT5G43990 | 26.429 | 420 | 209 | 14 | 321 | 690 | 264 | 633 | 6.50e-29 | 123 |
MsG0880043865.01.T01 | AT5G43990 | 26.429 | 420 | 209 | 14 | 321 | 690 | 264 | 633 | 6.50e-29 | 123 |
MsG0880043865.01.T01 | AT2G23740 | 31.301 | 246 | 122 | 11 | 404 | 621 | 1088 | 1314 | 5.96e-20 | 95.9 |
MsG0880043865.01.T01 | AT2G23740 | 31.301 | 246 | 122 | 11 | 404 | 621 | 1088 | 1314 | 5.96e-20 | 95.9 |
MsG0880043865.01.T01 | AT3G03750 | 30.396 | 227 | 131 | 8 | 468 | 691 | 145 | 347 | 6.00e-19 | 89.7 |
MsG0880043865.01.T01 | AT4G30860 | 28.643 | 199 | 102 | 5 | 496 | 694 | 307 | 465 | 2.39e-14 | 76.6 |
MsG0880043865.01.T01 | AT3G03750 | 27.556 | 225 | 124 | 8 | 468 | 691 | 145 | 331 | 2.13e-13 | 72.4 |
MsG0880043865.01.T01 | AT3G59960 | 28.333 | 180 | 87 | 6 | 517 | 694 | 111 | 250 | 6.19e-11 | 64.3 |
MsG0880043865.01.T01 | AT3G59960 | 28.333 | 180 | 87 | 6 | 517 | 694 | 111 | 250 | 6.19e-11 | 64.3 |
MsG0880043865.01.T01 | AT3G59960 | 28.333 | 180 | 87 | 6 | 517 | 694 | 111 | 250 | 6.19e-11 | 64.3 |
Find 156 sgRNAs with CRISPR-Local
Find 188 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGCTTATGCTGCTTGGAAAT+TGG | 0.240702 | 8:+31846022 | MsG0880043865.01.T01:CDS |
CTCTTTCAATCCAAGAATCT+TGG | 0.247325 | 8:-31845941 | None:intergenic |
GAACTCTTGTAGGCCCTTAT+TGG | 0.250077 | 8:-31845156 | None:intergenic |
GCACTAGACCAAAAGGTTTC+GGG | 0.260116 | 8:-31846196 | None:intergenic |
AGCTATATTTCCCACATTCT+TGG | 0.262990 | 8:-31846696 | None:intergenic |
AACATGGATTGAACATGTTT+TGG | 0.264294 | 8:-31844964 | None:intergenic |
GCATCAAGAGGGGTTTCTTC+AGG | 0.301685 | 8:-31845063 | None:intergenic |
TGCACTAGACCAAAAGGTTT+CGG | 0.303413 | 8:-31846197 | None:intergenic |
TGGTGCCTGGGATTGAGATT+GGG | 0.314399 | 8:+31845562 | MsG0880043865.01.T01:CDS |
GTGGTGCCTGGGATTGAGAT+TGG | 0.321695 | 8:+31845561 | MsG0880043865.01.T01:CDS |
TTCTTGGCACTTATAATTAG+AGG | 0.323045 | 8:-31846680 | None:intergenic |
TGGAGATAGCGACGATTATT+CGG | 0.325609 | 8:+31845209 | MsG0880043865.01.T01:CDS |
TTCATCATGTGAACTCTTGT+AGG | 0.336128 | 8:-31845166 | None:intergenic |
GATTATTCGGAAGGGTTTGT+AGG | 0.338716 | 8:+31845222 | MsG0880043865.01.T01:CDS |
CCATTGGAGGAATATGTCTA+AGG | 0.339713 | 8:-31846814 | None:intergenic |
GGGGTTTCTTCAGGTTCTTT+TGG | 0.342799 | 8:-31845054 | None:intergenic |
ATTGCAAAGAGTTTCTTAAA+AGG | 0.342943 | 8:+31845280 | MsG0880043865.01.T01:CDS |
TATATAAAATCCAAGATTCT+TGG | 0.344747 | 8:+31845931 | MsG0880043865.01.T01:CDS |
GCAGAGTTAACATATGATTA+TGG | 0.349411 | 8:+31846836 | MsG0880043865.01.T01:CDS |
AGAAGAGCGGGCGTGGTGCC+TGG | 0.355977 | 8:+31845549 | MsG0880043865.01.T01:CDS |
TTTCTGGTGGATACCCTTCT+GGG | 0.356149 | 8:+31844986 | MsG0880043865.01.T01:CDS |
GCAAAGTGCCGTGGTTTCTT+TGG | 0.357611 | 8:+31846929 | MsG0880043865.01.T01:CDS |
CTGCTAAAGTGACTCCAATA+AGG | 0.365251 | 8:+31845142 | MsG0880043865.01.T01:CDS |
GAATTATGAACCTAGCTTAC+TGG | 0.368503 | 8:+31846610 | MsG0880043865.01.T01:CDS |
CAGAACAAAGGGTAGAGGTT+GGG | 0.385564 | 8:+31846436 | MsG0880043865.01.T01:CDS |
TTCTTGCTGACCTCTCCAAT+GGG | 0.387936 | 8:+31846087 | MsG0880043865.01.T01:CDS |
ACTTGAATGGTTCATAAATA+CGG | 0.393021 | 8:-31846586 | None:intergenic |
TCAAAGAGGTAATCTTGCTT+TGG | 0.393398 | 8:+31845815 | MsG0880043865.01.T01:CDS |
GAGTATCAAGGATGGATCTA+AGG | 0.393584 | 8:+31845659 | MsG0880043865.01.T01:CDS |
AGAATACTATTTGCAGTATA+CGG | 0.394436 | 8:-31846305 | None:intergenic |
GGTTCATAATTCCACTTGAA+TGG | 0.395912 | 8:-31846599 | None:intergenic |
ACATCATTGACAAGTGATAC+TGG | 0.398710 | 8:-31846122 | None:intergenic |
TGGATTGAAAGAGGGAAATC+TGG | 0.399448 | 8:+31845951 | MsG0880043865.01.T01:CDS |
AGTAATGCTTTGACTTGTAA+AGG | 0.409168 | 8:+31845507 | MsG0880043865.01.T01:CDS |
GTTGTTTCGTCAGGTGTATA+TGG | 0.410656 | 8:+31845702 | MsG0880043865.01.T01:CDS |
GCGTTAAGCGTTGTTTCGTC+AGG | 0.419354 | 8:+31845693 | MsG0880043865.01.T01:CDS |
GGAGTCACTTTAGCAGCAAC+AGG | 0.425135 | 8:-31845135 | None:intergenic |
AGAACAAAGGGTAGAGGTTG+GGG | 0.428660 | 8:+31846437 | MsG0880043865.01.T01:CDS |
ATTCTTGCTGACCTCTCCAA+TGG | 0.429575 | 8:+31846086 | MsG0880043865.01.T01:CDS |
CACTAAAAGATGATGGTGAT+AGG | 0.431343 | 8:+31845367 | MsG0880043865.01.T01:CDS |
GTAATGCTTTGACTTGTAAA+GGG | 0.433132 | 8:+31845508 | MsG0880043865.01.T01:CDS |
CACGAGGAGAAGAGCGGGCG+TGG | 0.458603 | 8:+31845542 | MsG0880043865.01.T01:CDS |
CGAATGGAAATGTGTCTTGT+GGG | 0.460019 | 8:+31845600 | MsG0880043865.01.T01:CDS |
GGTTTGACGTATGAGTAAAA+TGG | 0.462437 | 8:-31845015 | None:intergenic |
TGCTAAAGTGACTCCAATAA+GGG | 0.462630 | 8:+31845143 | MsG0880043865.01.T01:CDS |
CAAGATTCTTGGATTGAAAG+AGG | 0.462943 | 8:+31845942 | MsG0880043865.01.T01:CDS |
GCATTTCTTTCTCCTTCTAA+AGG | 0.463277 | 8:-31846894 | None:intergenic |
GGGTTTGCATGCTCAATCAA+TGG | 0.467421 | 8:+31845620 | MsG0880043865.01.T01:CDS |
ATTACCCATGCTGGTCATGC+TGG | 0.474621 | 8:+31846860 | MsG0880043865.01.T01:CDS |
CTTACATCTTCCAGTAAGCT+AGG | 0.477855 | 8:-31846620 | None:intergenic |
TTACAATTGCAGCTTAAAGA+AGG | 0.477858 | 8:-31846221 | None:intergenic |
ATAAAAGTACCAGCACGTAT+AGG | 0.483482 | 8:-31846476 | None:intergenic |
GAAGAGCGGGCGTGGTGCCT+GGG | 0.483938 | 8:+31845550 | MsG0880043865.01.T01:CDS |
TATTTAAGTATAAGTTGGTA+AGG | 0.490370 | 8:+31845982 | MsG0880043865.01.T01:CDS |
TGAGCTGCTGCTGCTTTCAC+CGG | 0.492787 | 8:-31845105 | None:intergenic |
CACAGGTGCTAAACTACGTA+AGG | 0.494286 | 8:-31844938 | None:intergenic |
CATGAACAGTTCAAATCACC+TGG | 0.499372 | 8:-31846257 | None:intergenic |
GAGGTAGCAGTGCCTTTAGA+AGG | 0.502063 | 8:+31846882 | MsG0880043865.01.T01:CDS |
AAAACTCGCGAGCCGGTTGT+TGG | 0.502511 | 8:+31845312 | MsG0880043865.01.T01:CDS |
ACCTCCAGCATGACCAGCAT+GGG | 0.504841 | 8:-31846864 | None:intergenic |
TTCATGCATTCAAAGAAATG+AGG | 0.505419 | 8:+31846274 | MsG0880043865.01.T01:CDS |
GCACTTATAATTAGAGGAGA+TGG | 0.508609 | 8:-31846674 | None:intergenic |
GAAGGCTGCACTAGACCAAA+AGG | 0.511466 | 8:-31846203 | None:intergenic |
TGGTATATTTAAGTATAAGT+TGG | 0.512381 | 8:+31845977 | MsG0880043865.01.T01:CDS |
TTCAACATTCTGATATACCT+TGG | 0.513102 | 8:-31846531 | None:intergenic |
CGGCTACTTTGGCATCAAGA+GGG | 0.513820 | 8:-31845074 | None:intergenic |
CTTGGAAATTGGCTCAAAAG+TGG | 0.515222 | 8:+31846033 | MsG0880043865.01.T01:CDS |
AAGGTATATCAGAATGTTGA+AGG | 0.517616 | 8:+31846533 | MsG0880043865.01.T01:CDS |
TGGAATACTTTCAACCCCAT+TGG | 0.517944 | 8:-31846102 | None:intergenic |
TCATATGTTAACTCTGCCAT+TGG | 0.520039 | 8:-31846830 | None:intergenic |
ATGGAAGTGTTCAGAACAAA+GGG | 0.520947 | 8:+31846425 | MsG0880043865.01.T01:CDS |
TATGTTAACTCTGCCATTGG+AGG | 0.521537 | 8:-31846827 | None:intergenic |
AATAAAACCATTCCTTGTAC+AGG | 0.521861 | 8:-31846066 | None:intergenic |
GAAGAACAAAACTCGCGAGC+CGG | 0.522460 | 8:+31845305 | MsG0880043865.01.T01:CDS |
TATAAGTTGGTAAGGTTACC+TGG | 0.522467 | 8:+31845990 | MsG0880043865.01.T01:CDS |
GAACTCGTACCACCAACAAC+CGG | 0.528217 | 8:-31845324 | None:intergenic |
GGAAGGCAGGTTCCTGTACA+AGG | 0.528660 | 8:+31846054 | MsG0880043865.01.T01:CDS |
TGATAAACGAAAGCGTAGTA+CGG | 0.532272 | 8:+31845245 | MsG0880043865.01.T01:CDS |
TGTAACACAGCATGTGTCCC+AGG | 0.534817 | 8:+31846239 | MsG0880043865.01.T01:CDS |
TCGGCTACTTTGGCATCAAG+AGG | 0.534991 | 8:-31845075 | None:intergenic |
AACAAACACGAGGAGAAGAG+CGG | 0.537646 | 8:+31845536 | MsG0880043865.01.T01:CDS |
GCAGGTTCCTGTACAAGGAA+TGG | 0.539532 | 8:+31846059 | MsG0880043865.01.T01:CDS |
AATTATAAGTGCCAAGAATG+TGG | 0.540601 | 8:+31846685 | MsG0880043865.01.T01:CDS |
TCGAATGGAAATGTGTCTTG+TGG | 0.542415 | 8:+31845599 | MsG0880043865.01.T01:CDS |
TTGGCTCAAAAGTGGAAGGC+AGG | 0.546449 | 8:+31846041 | MsG0880043865.01.T01:CDS |
CCTTAGACATATTCCTCCAA+TGG | 0.547540 | 8:+31846814 | MsG0880043865.01.T01:CDS |
GGTTTGCATGCTCAATCAAT+GGG | 0.548358 | 8:+31845621 | MsG0880043865.01.T01:CDS |
ACTAAAAGATGATGGTGATA+GGG | 0.551648 | 8:+31845368 | MsG0880043865.01.T01:CDS |
CAAATAGTATTCTAGTGAGT+CGG | 0.552747 | 8:+31846315 | MsG0880043865.01.T01:CDS |
AAGATTCTTGGATTGAAAGA+GGG | 0.554674 | 8:+31845943 | MsG0880043865.01.T01:CDS |
ACTCGCGAGCCGGTTGTTGG+TGG | 0.555816 | 8:+31845315 | MsG0880043865.01.T01:CDS |
TCAGAACAAAGGGTAGAGGT+TGG | 0.558625 | 8:+31846435 | MsG0880043865.01.T01:CDS |
GGTGCCTGGGATTGAGATTG+GGG | 0.558794 | 8:+31845563 | MsG0880043865.01.T01:CDS |
GATTATGGAATTACCCATGC+TGG | 0.562248 | 8:+31846851 | MsG0880043865.01.T01:CDS |
AACCCGACACTAAAAGATGA+TGG | 0.564385 | 8:+31845360 | MsG0880043865.01.T01:CDS |
GTAGGAAAACACCGACACAT+AGG | 0.564832 | 8:-31846362 | None:intergenic |
AGGGTATCCACCAGAAAACA+TGG | 0.570325 | 8:-31844980 | None:intergenic |
ACATCCCCAATCTCAATCCC+AGG | 0.570470 | 8:-31845567 | None:intergenic |
TACCTCCAGCATGACCAGCA+TGG | 0.572482 | 8:-31846865 | None:intergenic |
TAGGAAAACACCGACACATA+GGG | 0.573999 | 8:-31846361 | None:intergenic |
GATAGCGACGATTATTCGGA+AGG | 0.574436 | 8:+31845213 | MsG0880043865.01.T01:CDS |
GATGAAGTTAGAGTCATTCG+AGG | 0.576279 | 8:+31845858 | MsG0880043865.01.T01:CDS |
GGCTACTTTGGCATCAAGAG+GGG | 0.578550 | 8:-31845073 | None:intergenic |
ATTATAAGTGCCAAGAATGT+GGG | 0.579471 | 8:+31846686 | MsG0880043865.01.T01:CDS |
GAAATGAATCAACAAGGCGA+TGG | 0.581588 | 8:+31845189 | MsG0880043865.01.T01:CDS |
GTGTTCAGAACAAAGGGTAG+AGG | 0.581999 | 8:+31846431 | MsG0880043865.01.T01:CDS |
TGACGTTTGATTCAATTCGA+AGG | 0.582508 | 8:+31845412 | MsG0880043865.01.T01:CDS |
TACTTTCAACCCCATTGGAG+AGG | 0.582710 | 8:-31846097 | None:intergenic |
AAGCCGCTTATTCATGAATG+TGG | 0.582827 | 8:+31846338 | MsG0880043865.01.T01:CDS |
GTTCCTTCGACTCTTCAAGT+TGG | 0.586309 | 8:-31845443 | None:intergenic |
ACACTGGATCCTATACGTGC+TGG | 0.589618 | 8:+31846467 | MsG0880043865.01.T01:CDS |
GGTGGTACGAGTTCTTATGT+TGG | 0.589976 | 8:+31845333 | MsG0880043865.01.T01:CDS |
CATTGGAGGAATATGTCTAA+GGG | 0.591612 | 8:-31846813 | None:intergenic |
AATTGATTATATGAGTATCA+AGG | 0.594679 | 8:+31845647 | MsG0880043865.01.T01:CDS |
CATGGAAGTGTTCAGAACAA+AGG | 0.594814 | 8:+31846424 | MsG0880043865.01.T01:CDS |
TTTGGAAGAGGAATGTGATG+GGG | 0.595616 | 8:-31845036 | None:intergenic |
CAATGATGTCGATGATGAGA+AGG | 0.596174 | 8:+31846136 | MsG0880043865.01.T01:CDS |
ACAAACACGAGGAGAAGAGC+GGG | 0.596233 | 8:+31845537 | MsG0880043865.01.T01:CDS |
GACTGGTTTAAAACAACACA+TGG | 0.599479 | 8:+31846406 | MsG0880043865.01.T01:CDS |
AGAAGTTATTAACAGAGCCA+AGG | 0.601057 | 8:+31846514 | MsG0880043865.01.T01:CDS |
TCATGCATTCAAAGAAATGA+GGG | 0.603338 | 8:+31846275 | MsG0880043865.01.T01:CDS |
CGTTTGATTCAATTCGAAGG+AGG | 0.603429 | 8:+31845415 | MsG0880043865.01.T01:CDS |
TAAAATGGAGGAAACCCAGA+AGG | 0.605934 | 8:-31845000 | None:intergenic |
GTATTTATGAACCATTCAAG+TGG | 0.607961 | 8:+31846588 | MsG0880043865.01.T01:CDS |
GAAATTGGCTCAAAAGTGGA+AGG | 0.609566 | 8:+31846037 | MsG0880043865.01.T01:CDS |
AGGAGAAAGAAATGCTTGTG+TGG | 0.611149 | 8:+31846902 | MsG0880043865.01.T01:CDS |
GAACAAAGGGTAGAGGTTGG+GGG | 0.611366 | 8:+31846438 | MsG0880043865.01.T01:CDS |
GATTATATGAGTATCAAGGA+TGG | 0.613333 | 8:+31845651 | MsG0880043865.01.T01:CDS |
ATAGCGACGATTATTCGGAA+GGG | 0.618833 | 8:+31845214 | MsG0880043865.01.T01:CDS |
GGAGAAAGAAATGCTTGTGT+GGG | 0.619249 | 8:+31846903 | MsG0880043865.01.T01:CDS |
ATGCCAACTTGAAGAGTCGA+AGG | 0.621780 | 8:+31845440 | MsG0880043865.01.T01:CDS |
ACCCATGCTGGTCATGCTGG+AGG | 0.621845 | 8:+31846863 | MsG0880043865.01.T01:CDS |
TTGACGTATGAGTAAAATGG+AGG | 0.626397 | 8:-31845012 | None:intergenic |
TCTTGCTGACCTCTCCAATG+GGG | 0.629627 | 8:+31846088 | MsG0880043865.01.T01:CDS |
GAAAGAGGGAAATCTGGCGG+TGG | 0.632493 | 8:+31845957 | MsG0880043865.01.T01:CDS |
AAGTTCAAATGTATGTAGTG+AGG | 0.636973 | 8:+31846640 | MsG0880043865.01.T01:CDS |
GGGCCACATTCATGAATAAG+CGG | 0.645886 | 8:-31846341 | None:intergenic |
TTGGCAGCCAGTCTTATATG+CGG | 0.646377 | 8:+31846754 | MsG0880043865.01.T01:CDS |
TATCAAGGATGGATCTAAGG+AGG | 0.648003 | 8:+31845662 | MsG0880043865.01.T01:CDS |
TGCACTTGCTATCAAGCGTG+CGG | 0.648738 | 8:+31845473 | MsG0880043865.01.T01:CDS |
ACTGATCAGAAGCTTCAAAG+AGG | 0.649359 | 8:+31845801 | MsG0880043865.01.T01:CDS |
TTGCATGCTCAATCAATGGG+TGG | 0.651570 | 8:+31845624 | MsG0880043865.01.T01:CDS |
TGTATATGGTGATGATACAG+AGG | 0.665371 | 8:+31845716 | MsG0880043865.01.T01:CDS |
TGTGGGTCAGCAAAGTGCCG+TGG | 0.671789 | 8:+31846920 | MsG0880043865.01.T01:CDS |
ATGAATGTGGCCCTATGTGT+CGG | 0.674340 | 8:+31846351 | MsG0880043865.01.T01:CDS |
CAAAGTAGCCGAGAAAACGC+CGG | 0.676869 | 8:+31845086 | MsG0880043865.01.T01:CDS |
AAAATGGAGGAAACCCAGAA+GGG | 0.679014 | 8:-31844999 | None:intergenic |
ACAGGTGCTAAACTACGTAA+GGG | 0.679266 | 8:-31844937 | None:intergenic |
TGGATCTAAGGAGGATACTG+TGG | 0.679943 | 8:+31845671 | MsG0880043865.01.T01:CDS |
AATGATGTCGATGATGAGAA+GGG | 0.683211 | 8:+31846137 | MsG0880043865.01.T01:CDS |
ATTGTTAACCAAAGAAACCA+CGG | 0.691606 | 8:-31846937 | None:intergenic |
GATGAAGAAATGAATCAACA+AGG | 0.703890 | 8:+31845183 | MsG0880043865.01.T01:CDS |
ATTGAAAGAGGGAAATCTGG+CGG | 0.710427 | 8:+31845954 | MsG0880043865.01.T01:CDS |
ATGAACAGTTCAAATCACCT+GGG | 0.723585 | 8:-31846256 | None:intergenic |
AAGGGTTTAAAACAAACACG+AGG | 0.770459 | 8:+31845526 | MsG0880043865.01.T01:CDS |
CTTTGGACAGAAGTGCACAG+CGG | 0.772147 | 8:+31845832 | MsG0880043865.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATAATGTTTTAATTTATAG+TGG | + | Chr8:31845741-31845760 | MsG0880043865.01.T01:CDS | 10.0% |
!! | AATTGATTATATGAGTATCA+AGG | + | Chr8:31845647-31845666 | MsG0880043865.01.T01:CDS | 20.0% |
!! | TATATAAAATCCAAGATTCT+TGG | + | Chr8:31845931-31845950 | MsG0880043865.01.T01:CDS | 20.0% |
!! | TCAAAAATCTATATGTATGA+TGG | + | Chr8:31845906-31845925 | MsG0880043865.01.T01:CDS | 20.0% |
!! | TGGTATATTTAAGTATAAGT+TGG | + | Chr8:31845977-31845996 | MsG0880043865.01.T01:CDS | 20.0% |
!!! | TATTTAAGTATAAGTTGGTA+AGG | + | Chr8:31845982-31846001 | MsG0880043865.01.T01:CDS | 20.0% |
! | AAAAAATGCAATGTGGATAA+AGG | - | Chr8:31846792-31846811 | None:intergenic | 25.0% |
! | ACTTGAATGGTTCATAAATA+CGG | - | Chr8:31846589-31846608 | None:intergenic | 25.0% |
! | AGAATACTATTTGCAGTATA+CGG | - | Chr8:31846308-31846327 | None:intergenic | 25.0% |
! | ATTGCAAAGAGTTTCTTAAA+AGG | + | Chr8:31845280-31845299 | MsG0880043865.01.T01:CDS | 25.0% |
!! | ATTTTTGAACTTCTATTCAC+AGG | - | Chr8:31845894-31845913 | None:intergenic | 25.0% |
!!! | GTTTTAATTTATAGTGGTCA+GGG | + | Chr8:31845747-31845766 | MsG0880043865.01.T01:CDS | 25.0% |
!!! | TGTTTTAATTTATAGTGGTC+AGG | + | Chr8:31845746-31845765 | MsG0880043865.01.T01:CDS | 25.0% |
AAAAAATTGCTTATGCTGCT+TGG | + | Chr8:31846015-31846034 | MsG0880043865.01.T01:CDS | 30.0% | |
AAGATTCTTGGATTGAAAGA+GGG | + | Chr8:31845943-31845962 | MsG0880043865.01.T01:CDS | 30.0% | |
AAGGTATATCAGAATGTTGA+AGG | + | Chr8:31846533-31846552 | MsG0880043865.01.T01:CDS | 30.0% | |
AAGTTCAAATGTATGTAGTG+AGG | + | Chr8:31846640-31846659 | MsG0880043865.01.T01:CDS | 30.0% | |
AATAAAACCATTCCTTGTAC+AGG | - | Chr8:31846069-31846088 | None:intergenic | 30.0% | |
AATTATAAGTGCCAAGAATG+TGG | + | Chr8:31846685-31846704 | MsG0880043865.01.T01:CDS | 30.0% | |
ATTATAAGTGCCAAGAATGT+GGG | + | Chr8:31846686-31846705 | MsG0880043865.01.T01:CDS | 30.0% | |
CAAATAGTATTCTAGTGAGT+CGG | + | Chr8:31846315-31846334 | MsG0880043865.01.T01:CDS | 30.0% | |
GATGAAGAAATGAATCAACA+AGG | + | Chr8:31845183-31845202 | MsG0880043865.01.T01:CDS | 30.0% | |
GATTATATGAGTATCAAGGA+TGG | + | Chr8:31845651-31845670 | MsG0880043865.01.T01:CDS | 30.0% | |
GCAGAGTTAACATATGATTA+TGG | + | Chr8:31846836-31846855 | MsG0880043865.01.T01:CDS | 30.0% | |
GTATTTATGAACCATTCAAG+TGG | + | Chr8:31846588-31846607 | MsG0880043865.01.T01:CDS | 30.0% | |
GTGAAATAAGTGAAAAAAGC+AGG | - | Chr8:31846164-31846183 | None:intergenic | 30.0% | |
TCATGCATTCAAAGAAATGA+GGG | + | Chr8:31846275-31846294 | MsG0880043865.01.T01:CDS | 30.0% | |
TTACAATTGCAGCTTAAAGA+AGG | - | Chr8:31846224-31846243 | None:intergenic | 30.0% | |
TTCAACATTCTGATATACCT+TGG | - | Chr8:31846534-31846553 | None:intergenic | 30.0% | |
TTCATGCATTCAAAGAAATG+AGG | + | Chr8:31846274-31846293 | MsG0880043865.01.T01:CDS | 30.0% | |
TTCTTGGCACTTATAATTAG+AGG | - | Chr8:31846683-31846702 | None:intergenic | 30.0% | |
! | ACTAAAAGATGATGGTGATA+GGG | + | Chr8:31845368-31845387 | MsG0880043865.01.T01:CDS | 30.0% |
! | TTATTTTCCGCATATAAGAC+TGG | - | Chr8:31846764-31846783 | None:intergenic | 30.0% |
!! | AACATGGATTGAACATGTTT+TGG | - | Chr8:31844967-31844986 | None:intergenic | 30.0% |
!! | ACTTTTATTTGTGAGTATGC+AGG | + | Chr8:31846491-31846510 | MsG0880043865.01.T01:CDS | 30.0% |
!! | AGTAATGCTTTGACTTGTAA+AGG | + | Chr8:31845507-31845526 | MsG0880043865.01.T01:CDS | 30.0% |
!! | GTAATGCTTTGACTTGTAAA+GGG | + | Chr8:31845508-31845527 | MsG0880043865.01.T01:CDS | 30.0% |
!!! | GGATGTTTTCTTTTTTCGAA+TGG | + | Chr8:31845584-31845603 | MsG0880043865.01.T01:CDS | 30.0% |
AAAAATCGAGTATCACAGAC+TGG | + | Chr8:31846389-31846408 | MsG0880043865.01.T01:CDS | 35.0% | |
AATGATGTCGATGATGAGAA+GGG | + | Chr8:31846137-31846156 | MsG0880043865.01.T01:CDS | 35.0% | |
ACATCATTGACAAGTGATAC+TGG | - | Chr8:31846125-31846144 | None:intergenic | 35.0% | |
AGAAGTTATTAACAGAGCCA+AGG | + | Chr8:31846514-31846533 | MsG0880043865.01.T01:CDS | 35.0% | |
AGCTATATTTCCCACATTCT+TGG | - | Chr8:31846699-31846718 | None:intergenic | 35.0% | |
ATGAACAGTTCAAATCACCT+GGG | - | Chr8:31846259-31846278 | None:intergenic | 35.0% | |
CAAGATTCTTGGATTGAAAG+AGG | + | Chr8:31845942-31845961 | MsG0880043865.01.T01:CDS | 35.0% | |
CATTGGAGGAATATGTCTAA+GGG | - | Chr8:31846816-31846835 | None:intergenic | 35.0% | |
CTCTTTCAATCCAAGAATCT+TGG | - | Chr8:31845944-31845963 | None:intergenic | 35.0% | |
GAATTATGAACCTAGCTTAC+TGG | + | Chr8:31846610-31846629 | MsG0880043865.01.T01:CDS | 35.0% | |
GCACTTATAATTAGAGGAGA+TGG | - | Chr8:31846677-31846696 | None:intergenic | 35.0% | |
GCATTTCTTTCTCCTTCTAA+AGG | - | Chr8:31846897-31846916 | None:intergenic | 35.0% | |
GGTTCATAATTCCACTTGAA+TGG | - | Chr8:31846602-31846621 | None:intergenic | 35.0% | |
GGTTTGACGTATGAGTAAAA+TGG | - | Chr8:31845018-31845037 | None:intergenic | 35.0% | |
TAAGGGCAAAAAATGCAATG+TGG | - | Chr8:31846799-31846818 | None:intergenic | 35.0% | |
TCAAAGAGGTAATCTTGCTT+TGG | + | Chr8:31845815-31845834 | MsG0880043865.01.T01:CDS | 35.0% | |
TCATATGTTAACTCTGCCAT+TGG | - | Chr8:31846833-31846852 | None:intergenic | 35.0% | |
TGACGTTTGATTCAATTCGA+AGG | + | Chr8:31845412-31845431 | MsG0880043865.01.T01:CDS | 35.0% | |
TGCTAAAGTGACTCCAATAA+GGG | + | Chr8:31845143-31845162 | MsG0880043865.01.T01:CDS | 35.0% | |
TTCATCATGTGAACTCTTGT+AGG | - | Chr8:31845169-31845188 | None:intergenic | 35.0% | |
TTGACGTATGAGTAAAATGG+AGG | - | Chr8:31845015-31845034 | None:intergenic | 35.0% | |
! | AAGGGTTTAAAACAAACACG+AGG | + | Chr8:31845526-31845545 | MsG0880043865.01.T01:CDS | 35.0% |
! | CACTAAAAGATGATGGTGAT+AGG | + | Chr8:31845367-31845386 | MsG0880043865.01.T01:CDS | 35.0% |
! | CATGTTCAATCCATGTTTTC+TGG | + | Chr8:31844970-31844989 | MsG0880043865.01.T01:CDS | 35.0% |
! | TCACCATCATCTTTTAGTGT+CGG | - | Chr8:31845366-31845385 | None:intergenic | 35.0% |
! | TGATAAACGAAAGCGTAGTA+CGG | + | Chr8:31845245-31845264 | MsG0880043865.01.T01:CDS | 35.0% |
! | TGTATATGGTGATGATACAG+AGG | + | Chr8:31845716-31845735 | MsG0880043865.01.T01:CDS | 35.0% |
!! | ATAAAAGTACCAGCACGTAT+AGG | - | Chr8:31846479-31846498 | None:intergenic | 35.0% |
!! | ATGGAAGTGTTCAGAACAAA+GGG | + | Chr8:31846425-31846444 | MsG0880043865.01.T01:CDS | 35.0% |
!! | GACTGGTTTAAAACAACACA+TGG | + | Chr8:31846406-31846425 | MsG0880043865.01.T01:CDS | 35.0% |
!! | TATAAGTTGGTAAGGTTACC+TGG | + | Chr8:31845990-31846009 | MsG0880043865.01.T01:CDS | 35.0% |
!! | TTTTGGAAGAGGAATGTGAT+GGG | - | Chr8:31845040-31845059 | None:intergenic | 35.0% |
!!! | GCATAAGCAATTTTTTGACC+AGG | - | Chr8:31846011-31846030 | None:intergenic | 35.0% |
AAAATGGAGGAAACCCAGAA+GGG | - | Chr8:31845002-31845021 | None:intergenic | 40.0% | |
AACCCGACACTAAAAGATGA+TGG | + | Chr8:31845360-31845379 | MsG0880043865.01.T01:CDS | 40.0% | |
AAGCCGCTTATTCATGAATG+TGG | + | Chr8:31846338-31846357 | MsG0880043865.01.T01:CDS | 40.0% | |
ACAGGTGCTAAACTACGTAA+GGG | - | Chr8:31844940-31844959 | None:intergenic | 40.0% | |
ACTGATCAGAAGCTTCAAAG+AGG | + | Chr8:31845801-31845820 | MsG0880043865.01.T01:CDS | 40.0% | |
ACTGGCTGCCAAAAAACATT+TGG | - | Chr8:31846746-31846765 | None:intergenic | 40.0% | |
AGGAGAAAGAAATGCTTGTG+TGG | + | Chr8:31846902-31846921 | MsG0880043865.01.T01:CDS | 40.0% | |
ATAGCGACGATTATTCGGAA+GGG | + | Chr8:31845214-31845233 | MsG0880043865.01.T01:CDS | 40.0% | |
ATTGAAAGAGGGAAATCTGG+CGG | + | Chr8:31845954-31845973 | MsG0880043865.01.T01:CDS | 40.0% | |
CAATGATGTCGATGATGAGA+AGG | + | Chr8:31846136-31846155 | MsG0880043865.01.T01:CDS | 40.0% | |
CATGAACAGTTCAAATCACC+TGG | - | Chr8:31846260-31846279 | None:intergenic | 40.0% | |
CCATTGGAGGAATATGTCTA+AGG | - | Chr8:31846817-31846836 | None:intergenic | 40.0% | |
CCTTAGACATATTCCTCCAA+TGG | + | Chr8:31846814-31846833 | MsG0880043865.01.T01:CDS | 40.0% | |
CGAATGGAAATGTGTCTTGT+GGG | + | Chr8:31845600-31845619 | MsG0880043865.01.T01:CDS | 40.0% | |
CGTTTGATTCAATTCGAAGG+AGG | + | Chr8:31845415-31845434 | MsG0880043865.01.T01:CDS | 40.0% | |
CTGCTAAAGTGACTCCAATA+AGG | + | Chr8:31845142-31845161 | MsG0880043865.01.T01:CDS | 40.0% | |
CTGGCTGCCAAAAAACATTT+GGG | - | Chr8:31846745-31846764 | None:intergenic | 40.0% | |
CTTACATCTTCCAGTAAGCT+AGG | - | Chr8:31846623-31846642 | None:intergenic | 40.0% | |
GAAATGAATCAACAAGGCGA+TGG | + | Chr8:31845189-31845208 | MsG0880043865.01.T01:CDS | 40.0% | |
GAGTATCAAGGATGGATCTA+AGG | + | Chr8:31845659-31845678 | MsG0880043865.01.T01:CDS | 40.0% | |
GATGAAGTTAGAGTCATTCG+AGG | + | Chr8:31845858-31845877 | MsG0880043865.01.T01:CDS | 40.0% | |
GATTATGGAATTACCCATGC+TGG | + | Chr8:31846851-31846870 | MsG0880043865.01.T01:CDS | 40.0% | |
GATTATTCGGAAGGGTTTGT+AGG | + | Chr8:31845222-31845241 | MsG0880043865.01.T01:CDS | 40.0% | |
GGAGAAAGAAATGCTTGTGT+GGG | + | Chr8:31846903-31846922 | MsG0880043865.01.T01:CDS | 40.0% | |
GGTTTGCATGCTCAATCAAT+GGG | + | Chr8:31845621-31845640 | MsG0880043865.01.T01:CDS | 40.0% | |
TAAAATGGAGGAAACCCAGA+AGG | - | Chr8:31845003-31845022 | None:intergenic | 40.0% | |
TAGGAAAACACCGACACATA+GGG | - | Chr8:31846364-31846383 | None:intergenic | 40.0% | |
TATCAAGGATGGATCTAAGG+AGG | + | Chr8:31845662-31845681 | MsG0880043865.01.T01:CDS | 40.0% | |
TATGTTAACTCTGCCATTGG+AGG | - | Chr8:31846830-31846849 | None:intergenic | 40.0% | |
TCGAATGGAAATGTGTCTTG+TGG | + | Chr8:31845599-31845618 | MsG0880043865.01.T01:CDS | 40.0% | |
TGCACTAGACCAAAAGGTTT+CGG | - | Chr8:31846200-31846219 | None:intergenic | 40.0% | |
TGGAATACTTTCAACCCCAT+TGG | - | Chr8:31846105-31846124 | None:intergenic | 40.0% | |
TGGAGATAGCGACGATTATT+CGG | + | Chr8:31845209-31845228 | MsG0880043865.01.T01:CDS | 40.0% | |
TGGATTGAAAGAGGGAAATC+TGG | + | Chr8:31845951-31845970 | MsG0880043865.01.T01:CDS | 40.0% | |
TGGCTGCCAAAAAACATTTG+GGG | - | Chr8:31846744-31846763 | None:intergenic | 40.0% | |
TTTGGAAGAGGAATGTGATG+GGG | - | Chr8:31845039-31845058 | None:intergenic | 40.0% | |
! | CACCATCATCTTTTAGTGTC+GGG | - | Chr8:31845365-31845384 | None:intergenic | 40.0% |
! | CTCAAAAACCCGAAACCTTT+TGG | + | Chr8:31846188-31846207 | MsG0880043865.01.T01:CDS | 40.0% |
! | CTGTGATACTCGATTTTTGC+AGG | - | Chr8:31846387-31846406 | None:intergenic | 40.0% |
! | CTTGGAAATTGGCTCAAAAG+TGG | + | Chr8:31846033-31846052 | MsG0880043865.01.T01:CDS | 40.0% |
! | GAAATTGGCTCAAAAGTGGA+AGG | + | Chr8:31846037-31846056 | MsG0880043865.01.T01:CDS | 40.0% |
! | GATACTCGATTTTTGCAGGT+AGG | - | Chr8:31846383-31846402 | None:intergenic | 40.0% |
! | GTTCAATCCATGTTTTCTGG+TGG | + | Chr8:31844973-31844992 | MsG0880043865.01.T01:CDS | 40.0% |
! | GTTGTTTCGTCAGGTGTATA+TGG | + | Chr8:31845702-31845721 | MsG0880043865.01.T01:CDS | 40.0% |
! | TGCTTATGCTGCTTGGAAAT+TGG | + | Chr8:31846022-31846041 | MsG0880043865.01.T01:CDS | 40.0% |
!! | CATGGAAGTGTTCAGAACAA+AGG | + | Chr8:31846424-31846443 | MsG0880043865.01.T01:CDS | 40.0% |
!! | CTTTTGGAAGAGGAATGTGA+TGG | - | Chr8:31845041-31845060 | None:intergenic | 40.0% |
!! | TCTTCAGGTTCTTTTGGAAG+AGG | - | Chr8:31845051-31845070 | None:intergenic | 40.0% |
!!! | GTTGCTCCCCAAATGTTTTT+TGG | + | Chr8:31846735-31846754 | MsG0880043865.01.T01:CDS | 40.0% |
!!! | TGAACATGTTTTGGCAACAC+AGG | - | Chr8:31844958-31844977 | None:intergenic | 40.0% |
AACAAACACGAGGAGAAGAG+CGG | + | Chr8:31845536-31845555 | MsG0880043865.01.T01:CDS | 45.0% | |
AGAACAAAGGGTAGAGGTTG+GGG | + | Chr8:31846437-31846456 | MsG0880043865.01.T01:CDS | 45.0% | |
ATGAATGTGGCCCTATGTGT+CGG | + | Chr8:31846351-31846370 | MsG0880043865.01.T01:CDS | 45.0% | |
ATGCCAACTTGAAGAGTCGA+AGG | + | Chr8:31845440-31845459 | MsG0880043865.01.T01:CDS | 45.0% | |
ATTCTTGCTGACCTCTCCAA+TGG | + | Chr8:31846086-31846105 | MsG0880043865.01.T01:CDS | 45.0% | |
CACAGGTGCTAAACTACGTA+AGG | - | Chr8:31844941-31844960 | None:intergenic | 45.0% | |
CAGAACAAAGGGTAGAGGTT+GGG | + | Chr8:31846436-31846455 | MsG0880043865.01.T01:CDS | 45.0% | |
GAACTCTTGTAGGCCCTTAT+TGG | - | Chr8:31845159-31845178 | None:intergenic | 45.0% | |
GATAGCGACGATTATTCGGA+AGG | + | Chr8:31845213-31845232 | MsG0880043865.01.T01:CDS | 45.0% | |
GCACTAGACCAAAAGGTTTC+GGG | - | Chr8:31846199-31846218 | None:intergenic | 45.0% | |
GGGCCACATTCATGAATAAG+CGG | - | Chr8:31846344-31846363 | None:intergenic | 45.0% | |
GGGTTTGCATGCTCAATCAA+TGG | + | Chr8:31845620-31845639 | MsG0880043865.01.T01:CDS | 45.0% | |
GGTGGTACGAGTTCTTATGT+TGG | + | Chr8:31845333-31845352 | MsG0880043865.01.T01:CDS | 45.0% | |
GTAGGAAAACACCGACACAT+AGG | - | Chr8:31846365-31846384 | None:intergenic | 45.0% | |
GTGTTCAGAACAAAGGGTAG+AGG | + | Chr8:31846431-31846450 | MsG0880043865.01.T01:CDS | 45.0% | |
GTTCCTTCGACTCTTCAAGT+TGG | - | Chr8:31845446-31845465 | None:intergenic | 45.0% | |
TACTTTCAACCCCATTGGAG+AGG | - | Chr8:31846100-31846119 | None:intergenic | 45.0% | |
TCAGAACAAAGGGTAGAGGT+TGG | + | Chr8:31846435-31846454 | MsG0880043865.01.T01:CDS | 45.0% | |
TGGATCTAAGGAGGATACTG+TGG | + | Chr8:31845671-31845690 | MsG0880043865.01.T01:CDS | 45.0% | |
TTCTTGCTGACCTCTCCAAT+GGG | + | Chr8:31846087-31846106 | MsG0880043865.01.T01:CDS | 45.0% | |
TTGCATGCTCAATCAATGGG+TGG | + | Chr8:31845624-31845643 | MsG0880043865.01.T01:CDS | 45.0% | |
! | AGGGTATCCACCAGAAAACA+TGG | - | Chr8:31844983-31845002 | None:intergenic | 45.0% |
! | TTGGCAGCCAGTCTTATATG+CGG | + | Chr8:31846754-31846773 | MsG0880043865.01.T01:CDS | 45.0% |
! | TTTCTGGTGGATACCCTTCT+GGG | + | Chr8:31844986-31845005 | MsG0880043865.01.T01:CDS | 45.0% |
!! | GGGGTTTCTTCAGGTTCTTT+TGG | - | Chr8:31845057-31845076 | None:intergenic | 45.0% |
!! | TTTTCTGGTGGATACCCTTC+TGG | + | Chr8:31844985-31845004 | MsG0880043865.01.T01:CDS | 45.0% |
ACAAACACGAGGAGAAGAGC+GGG | + | Chr8:31845537-31845556 | MsG0880043865.01.T01:CDS | 50.0% | |
ACACTGGATCCTATACGTGC+TGG | + | Chr8:31846467-31846486 | MsG0880043865.01.T01:CDS | 50.0% | |
ACATCCCCAATCTCAATCCC+AGG | - | Chr8:31845570-31845589 | None:intergenic | 50.0% | |
ATTACCCATGCTGGTCATGC+TGG | + | Chr8:31846860-31846879 | MsG0880043865.01.T01:CDS | 50.0% | |
CAAAGTAGCCGAGAAAACGC+CGG | + | Chr8:31845086-31845105 | MsG0880043865.01.T01:CDS | 50.0% | |
GAACAAAGGGTAGAGGTTGG+GGG | + | Chr8:31846438-31846457 | MsG0880043865.01.T01:CDS | 50.0% | |
GAACTCGTACCACCAACAAC+CGG | - | Chr8:31845327-31845346 | None:intergenic | 50.0% | |
GAAGAACAAAACTCGCGAGC+CGG | + | Chr8:31845305-31845324 | MsG0880043865.01.T01:CDS | 50.0% | |
GAAGGCTGCACTAGACCAAA+AGG | - | Chr8:31846206-31846225 | None:intergenic | 50.0% | |
GAGGTAGCAGTGCCTTTAGA+AGG | + | Chr8:31846882-31846901 | MsG0880043865.01.T01:CDS | 50.0% | |
GCAGGTTCCTGTACAAGGAA+TGG | + | Chr8:31846059-31846078 | MsG0880043865.01.T01:CDS | 50.0% | |
GCATCAAGAGGGGTTTCTTC+AGG | - | Chr8:31845066-31845085 | None:intergenic | 50.0% | |
TCTTGCTGACCTCTCCAATG+GGG | + | Chr8:31846088-31846107 | MsG0880043865.01.T01:CDS | 50.0% | |
TGGTGCCTGGGATTGAGATT+GGG | + | Chr8:31845562-31845581 | MsG0880043865.01.T01:CDS | 50.0% | |
TGTAACACAGCATGTGTCCC+AGG | + | Chr8:31846239-31846258 | MsG0880043865.01.T01:CDS | 50.0% | |
TTGGCTCAAAAGTGGAAGGC+AGG | + | Chr8:31846041-31846060 | MsG0880043865.01.T01:CDS | 50.0% | |
! | CGGCTACTTTGGCATCAAGA+GGG | - | Chr8:31845077-31845096 | None:intergenic | 50.0% |
! | CTTTGGACAGAAGTGCACAG+CGG | + | Chr8:31845832-31845851 | MsG0880043865.01.T01:CDS | 50.0% |
! | GCGTTAAGCGTTGTTTCGTC+AGG | + | Chr8:31845693-31845712 | MsG0880043865.01.T01:CDS | 50.0% |
! | GGAGTCACTTTAGCAGCAAC+AGG | - | Chr8:31845138-31845157 | None:intergenic | 50.0% |
! | GGCTACTTTGGCATCAAGAG+GGG | - | Chr8:31845076-31845095 | None:intergenic | 50.0% |
! | TCGGCTACTTTGGCATCAAG+AGG | - | Chr8:31845078-31845097 | None:intergenic | 50.0% |
! | TGCTTTCACCGGCGTTTTCT+CGG | - | Chr8:31845097-31845116 | None:intergenic | 50.0% |
!! | GCAAAGTGCCGTGGTTTCTT+TGG | + | Chr8:31846929-31846948 | MsG0880043865.01.T01:CDS | 50.0% |
!! | TGCACTTGCTATCAAGCGTG+CGG | + | Chr8:31845473-31845492 | MsG0880043865.01.T01:CDS | 50.0% |
AAAACTCGCGAGCCGGTTGT+TGG | + | Chr8:31845312-31845331 | MsG0880043865.01.T01:CDS | 55.0% | |
ACCTCCAGCATGACCAGCAT+GGG | - | Chr8:31846867-31846886 | None:intergenic | 55.0% | |
GAAAGAGGGAAATCTGGCGG+TGG | + | Chr8:31845957-31845976 | MsG0880043865.01.T01:CDS | 55.0% | |
GGAAGGCAGGTTCCTGTACA+AGG | + | Chr8:31846054-31846073 | MsG0880043865.01.T01:CDS | 55.0% | |
GGTGCCTGGGATTGAGATTG+GGG | + | Chr8:31845563-31845582 | MsG0880043865.01.T01:CDS | 55.0% | |
GTGGTGCCTGGGATTGAGAT+TGG | + | Chr8:31845561-31845580 | MsG0880043865.01.T01:CDS | 55.0% | |
TACCTCCAGCATGACCAGCA+TGG | - | Chr8:31846868-31846887 | None:intergenic | 55.0% | |
! | CGGCGTTTTCTCGGCTACTT+TGG | - | Chr8:31845088-31845107 | None:intergenic | 55.0% |
!! | TGAGCTGCTGCTGCTTTCAC+CGG | - | Chr8:31845108-31845127 | None:intergenic | 55.0% |
ACCCATGCTGGTCATGCTGG+AGG | + | Chr8:31846863-31846882 | MsG0880043865.01.T01:CDS | 60.0% | |
AGGTTGGGGGCTTCGAACAC+TGG | + | Chr8:31846451-31846470 | MsG0880043865.01.T01:CDS | 60.0% | |
!! | TGTGGGTCAGCAAAGTGCCG+TGG | + | Chr8:31846920-31846939 | MsG0880043865.01.T01:CDS | 60.0% |
ACTCGCGAGCCGGTTGTTGG+TGG | + | Chr8:31845315-31845334 | MsG0880043865.01.T01:CDS | 65.0% | |
AGAAGAGCGGGCGTGGTGCC+TGG | + | Chr8:31845549-31845568 | MsG0880043865.01.T01:CDS | 70.0% | |
CACGAGGAGAAGAGCGGGCG+TGG | + | Chr8:31845542-31845561 | MsG0880043865.01.T01:CDS | 70.0% | |
GAAGAGCGGGCGTGGTGCCT+GGG | + | Chr8:31845550-31845569 | MsG0880043865.01.T01:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr8 | gene | 31844871 | 31846955 | 31844871 | ID=MsG0880043865.01;Name=MsG0880043865.01 |
Chr8 | mRNA | 31844871 | 31846955 | 31844871 | ID=MsG0880043865.01.T01;Parent=MsG0880043865.01;Name=MsG0880043865.01.T01;_AED=0.36;_eAED=0.36;_QI=0|-1|0|1|-1|1|1|0|694 |
Chr8 | exon | 31844871 | 31846955 | 31844871 | ID=MsG0880043865.01.T01:exon:9678;Parent=MsG0880043865.01.T01 |
Chr8 | CDS | 31844871 | 31846955 | 31844871 | ID=MsG0880043865.01.T01:cds;Parent=MsG0880043865.01.T01 |
Gene Sequence |
Protein sequence |