AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580024960.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024960.01.T01 MTR_5g020140 98.297 646 11 0 274 919 104 749 0.0 1297
MsG0580024960.01.T01 MTR_5g020140 81.889 646 36 4 274 919 335 899 0.0 1019
MsG0580024960.01.T01 MTR_8g077680 72.783 654 167 5 274 918 339 990 0.0 952
MsG0580024960.01.T01 MTR_3g093120 46.875 256 135 1 20 275 278 532 4.21e-77 261
MsG0580024960.01.T01 MTR_2g075320 40.789 228 104 2 47 274 93 289 1.02e-47 172
MsG0580024960.01.T01 MTR_6g472230 42.132 197 114 0 64 260 2 198 7.48e-44 173
MsG0580024960.01.T01 MTR_7g026095 48.611 144 74 0 56 199 27 170 1.17e-43 162
MsG0580024960.01.T01 MTR_3g452820 38.863 211 89 3 35 245 1 171 4.29e-43 155
MsG0580024960.01.T01 MTR_6g060522 57.843 102 43 0 155 256 2 103 2.51e-32 124
MsG0580024960.01.T01 MTR_7g056567 51.220 123 57 3 153 274 16 136 9.98e-31 119
MsG0580024960.01.T01 MTR_8g072800 96.491 57 2 0 461 517 34 90 1.03e-28 112
MsG0580024960.01.T01 MTR_8g011410 35.023 217 114 5 39 254 774 964 1.64e-27 120
MsG0580024960.01.T01 MTR_3g448730 41.379 116 67 1 149 264 102 216 7.19e-25 104
MsG0580024960.01.T01 MTR_6g060910 43.000 100 50 1 86 178 25 124 3.90e-24 99.0
MsG0580024960.01.T01 MTR_6g033925 36.957 138 84 1 31 168 1 135 1.30e-23 100
MsG0580024960.01.T01 MTR_4g070440 41.830 153 30 4 3 154 5 99 2.21e-23 95.9
MsG0580024960.01.T01 MTR_8g059225 43.689 103 57 1 130 232 71 172 5.22e-23 97.4
MsG0580024960.01.T01 MTR_7g021330 45.545 101 52 1 46 143 9 109 3.10e-21 90.1
MsG0580024960.01.T01 MTR_8g026880 46.491 114 36 1 161 274 2 90 7.18e-21 88.6
MsG0580024960.01.T01 MTR_3g022740 31.863 204 89 4 60 263 9 162 4.04e-20 96.3
MsG0580024960.01.T01 MTR_1g051400 40.000 90 54 0 98 187 73 162 2.63e-17 81.3
MsG0580024960.01.T01 MTR_6g077680 34.459 148 78 3 30 177 512 640 3.53e-16 83.6
MsG0580024960.01.T01 MTR_2g460640 33.663 101 66 1 35 135 3 102 1.99e-15 75.1
MsG0580024960.01.T01 MTR_2g017850 28.272 191 89 5 76 264 188 332 2.82e-15 79.0
MsG0580024960.01.T01 MTR_1g058200 44.444 81 45 0 92 172 58 138 6.16e-15 73.6
MsG0580024960.01.T01 MTR_1g104513 54.386 57 26 0 196 252 98 154 3.99e-14 72.0
MsG0580024960.01.T01 MTR_4g009290 40.000 100 39 3 93 192 78 156 4.76e-14 73.2
MsG0580024960.01.T01 MTR_0303s0010 47.619 63 33 0 118 180 102 164 8.08e-14 70.5
MsG0580024960.01.T01 MTR_1g021460 42.529 87 49 1 58 144 41 126 3.83e-13 68.6
MsG0580024960.01.T01 MTR_0233s0060 45.070 71 39 0 118 188 6 76 4.60e-13 71.6
MsG0580024960.01.T01 MTR_2g014690 60.784 51 19 1 210 259 128 178 6.08e-13 68.9
MsG0580024960.01.T01 MTR_7g056703 26.866 201 88 5 58 256 1 144 1.10e-12 69.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024960.01.T01 AT4G36630 67.976 662 195 9 274 919 340 1000 0.0 879
MsG0580024960.01.T01 AT4G36630 66.785 563 170 9 274 820 340 901 0.0 728
MsG0580024960.01.T01 AT4G23160 46.185 249 130 3 19 264 342 589 2.73e-63 232
MsG0580024960.01.T01 AT4G23160 46.185 249 130 3 19 264 342 589 2.73e-63 232

Find 207 sgRNAs with CRISPR-Local

Find 449 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTCCCTCGGTAAAAGTTTA+AGG 0.125485 5:-12197433 None:intergenic
ACTTAAATGCTCAACAAAAT+TGG 0.163182 5:+12196625 MsG0580024960.01.T01:CDS
CAAATTCTTAAGTACGTTAA+AGG 0.163209 5:+12192850 MsG0580024960.01.T01:CDS
CAGGATTTGCAATCATTTCT+TGG 0.207715 5:+12197629 MsG0580024960.01.T01:intron
GGTAATATTTCGGTTGGTTC+TGG 0.234591 5:+12194700 MsG0580024960.01.T01:CDS
GTACCAGATACGACATATTT+TGG 0.249582 5:+12192603 MsG0580024960.01.T01:CDS
GATTGTAAATATTGGGTTAC+AGG 0.261624 5:+12198428 MsG0580024960.01.T01:three_prime_UTR
CTCCAAGCATTGCTTCTTAC+TGG 0.273542 5:+12194760 MsG0580024960.01.T01:CDS
CAATATGATAATGCCAATTC+TGG 0.288745 5:-12197032 None:intergenic
GTCAGGTGTTTCAGATGATA+TGG 0.290151 5:+12194117 MsG0580024960.01.T01:CDS
TTACAGGGGTCAGGGCATTT+TGG 0.303401 5:+12198444 MsG0580024960.01.T01:three_prime_UTR
TGAGAATTCCAGAACAAGTA+TGG 0.303616 5:-12196147 None:intergenic
TCTCTGTGCCGAAAGAAAAT+AGG 0.306759 5:+12198041 MsG0580024960.01.T01:CDS
AACTGACTTACTACACTAAC+TGG 0.314981 5:-12192787 None:intergenic
ACCGAGGGAGACTAAGTTAC+AGG 0.317122 5:+12197445 MsG0580024960.01.T01:CDS
TTTCTTGTGATTGTAAATAT+TGG 0.319890 5:+12198420 MsG0580024960.01.T01:three_prime_UTR
TTGGTGGAAATTTAATTTCA+TGG 0.322239 5:+12192995 MsG0580024960.01.T01:CDS
AAGTACTTAGCTTGCATGTT+TGG 0.331692 5:-12196269 None:intergenic
AACGAATCATAATATGCTTA+TGG 0.346723 5:+12194183 MsG0580024960.01.T01:CDS
AGTTGTCTTTGGAAGGATAA+TGG 0.347247 5:-12194032 None:intergenic
TTCTTGTGATTGTAAATATT+GGG 0.348057 5:+12198421 MsG0580024960.01.T01:three_prime_UTR
CGCAGGTGGGATAGAATAAA+TGG 0.349821 5:+12197401 MsG0580024960.01.T01:CDS
AATAGATTTGCATAAGCAAT+AGG 0.353003 5:-12197112 None:intergenic
TGTGAAGCTTCTTCCTAATC+AGG 0.357136 5:+12192678 MsG0580024960.01.T01:CDS
AGGATTTGCAATCATTTCTT+GGG 0.359164 5:+12197630 MsG0580024960.01.T01:intron
GTAGCTTCATGTTCCAGAAT+TGG 0.360731 5:+12197019 MsG0580024960.01.T01:intron
ATGGTTGAAGCATTTACTTC+AGG 0.361582 5:+12193101 MsG0580024960.01.T01:CDS
GACGGATCCCATACTTGTTC+TGG 0.362031 5:+12196139 MsG0580024960.01.T01:CDS
TGCATTCTCGTCGGTTGGTA+AGG 0.363589 5:-12194143 None:intergenic
TCATGAACAATAGTTGTCTT+TGG 0.365434 5:-12194043 None:intergenic
ATCTGAATATCCAATGATTT+CGG 0.370566 5:-12192914 None:intergenic
TGGAAATATACCAGCTGATA+TGG 0.371949 5:+12196220 MsG0580024960.01.T01:CDS
ATGAATGAGAATGCCATATC+TGG 0.374201 5:+12196308 MsG0580024960.01.T01:CDS
AAATTATTGTCGGCTTTAGA+AGG 0.375333 5:+12196678 MsG0580024960.01.T01:CDS
CCTCCAAAATATGTCGTATC+TGG 0.383455 5:-12192606 None:intergenic
CCAGAGAAGTTGGACATTGA+TGG 0.384030 5:+12194067 MsG0580024960.01.T01:CDS
TCTCCGGATTAGTTAGTCCT+TGG 0.390500 5:-12198314 None:intergenic
AATATTGGGTTACAGGGGTC+AGG 0.398687 5:+12198435 MsG0580024960.01.T01:three_prime_UTR
TTAGGAAGAAGCTTCACATT+AGG 0.398748 5:-12192673 None:intergenic
CTTAAATGCTCAACAAAATT+GGG 0.401030 5:+12196626 MsG0580024960.01.T01:CDS
TCAGGGGCGTGGTAATATTT+CGG 0.401268 5:+12194690 MsG0580024960.01.T01:intron
TTGGATATTCAGATGCTGAT+TGG 0.401337 5:+12192923 MsG0580024960.01.T01:CDS
TGACGAAACTCTGGAAAGAT+AGG 0.401467 5:-12194098 None:intergenic
CTCTGTGCCGAAAGAAAATA+GGG 0.407080 5:+12198042 MsG0580024960.01.T01:CDS
CCATCAATGTCCAACTTCTC+TGG 0.407872 5:-12194067 None:intergenic
CTCCGGATTAGTTAGTCCTT+GGG 0.408857 5:-12198313 None:intergenic
GCGACAGAGCGAAAACCTTC+AGG 0.409251 5:+12197709 MsG0580024960.01.T01:CDS
TGGATATTCAGATGCTGATT+GGG 0.411773 5:+12192924 MsG0580024960.01.T01:CDS
GGGCTTGTCTTTACTGATAG+AGG 0.415518 5:+12192886 MsG0580024960.01.T01:CDS
ATTGTCTCTGTATGTTCATA+AGG 0.416059 5:+12196806 MsG0580024960.01.T01:CDS
AAGCTTGCTGTGGTCTTTCG+AGG 0.416092 5:-12197140 None:intergenic
TTTCGGTTGGTTCTGGAGCT+CGG 0.416243 5:+12194707 MsG0580024960.01.T01:CDS
GTATTTGCCTGGATCAGTAT+AGG 0.416301 5:-12192707 None:intergenic
ATAACTATGCATCCTACAAT+AGG 0.421989 5:+12194299 MsG0580024960.01.T01:CDS
CTCCCTCGGTAAAAGTTTAA+GGG 0.423938 5:-12197432 None:intergenic
GAAGAAGTTCAAGAGCTTGC+CGG 0.425673 5:-12194912 None:intergenic
GGACGATGGGATTGATTCTC+CGG 0.429102 5:-12198330 None:intergenic
AGACGTTTCAGCAGAGCCTC+TGG 0.433778 5:-12196717 None:intergenic
GTCGGCTTTAGAAGGCATAT+CGG 0.433838 5:+12196686 MsG0580024960.01.T01:CDS
CTTCCTCAACTGAGACCCTT+TGG 0.441954 5:-12198150 None:intergenic
ACCTATCTGACGTACTTGAT+TGG 0.443552 5:+12196595 MsG0580024960.01.T01:CDS
CTAACTTTCCGACAAGTCTT+CGG 0.444181 5:-12192729 None:intergenic
AAGAAAATTGCGGAGATTGA+GGG 0.445231 5:+12197257 MsG0580024960.01.T01:CDS
GGCATTATCATATTGTGATC+GGG 0.449096 5:+12197040 MsG0580024960.01.T01:CDS
TGCACGAGAGTGCTCCCGTT+GGG 0.451076 5:-12198086 None:intergenic
GGCAAATACCGAAGACTTGT+CGG 0.451359 5:+12192721 MsG0580024960.01.T01:CDS
TGAAACACCTGACGAAACTC+TGG 0.452802 5:-12194107 None:intergenic
TGAAGAGCGTGCAATATTGT+TGG 0.454529 5:+12196758 MsG0580024960.01.T01:CDS
AGAGGCAACACCGAAATCAT+TGG 0.459312 5:+12192904 MsG0580024960.01.T01:CDS
TGGTGCACTACCTCTAGAAA+TGG 0.459530 5:-12197204 None:intergenic
TTCGGTTGGTTCTGGAGCTC+GGG 0.460897 5:+12194708 MsG0580024960.01.T01:CDS
CGTTAAAGGATCACCTGGTA+AGG 0.463160 5:+12192864 MsG0580024960.01.T01:CDS
AATATAGCTTGACAATCAAT+TGG 0.463592 5:-12198197 None:intergenic
ACAAGTCTTCGGTATTTGCC+TGG 0.465027 5:-12192718 None:intergenic
TGGTTCTGGAGCTCGGGAGA+TGG 0.465680 5:+12194714 MsG0580024960.01.T01:CDS
GAAGAGCGTGCAATATTGTT+GGG 0.469594 5:+12196759 MsG0580024960.01.T01:CDS
CCATGGTACTTGCTGGTTGG+TGG 0.470063 5:+12198240 MsG0580024960.01.T01:three_prime_UTR
TGTTCATGAGCCAGAGAAGT+TGG 0.471501 5:+12194057 MsG0580024960.01.T01:CDS
CAGAGAAGTTGGACATTGAT+GGG 0.472173 5:+12194068 MsG0580024960.01.T01:CDS
TTTGGAGGAGACAGGTCTTA+CGG 0.473315 5:+12192621 MsG0580024960.01.T01:CDS
TATTTGCCTGGATCAGTATA+GGG 0.476326 5:-12192706 None:intergenic
ACTCTCCTTGTGACAACCAT+TGG 0.481173 5:+12192815 MsG0580024960.01.T01:CDS
GCATTCTCGTCGGTTGGTAA+GGG 0.485407 5:-12194142 None:intergenic
AAAGAAAATTGCGGAGATTG+AGG 0.486392 5:+12197256 MsG0580024960.01.T01:CDS
GCAGCTTTAGAAATACTAAG+AGG 0.493048 5:+12194793 MsG0580024960.01.T01:CDS
GGATCCATAGGAGTCTCAAC+TGG 0.493121 5:-12192652 None:intergenic
TCTTGAACTTCTTCACAAGT+TGG 0.493830 5:+12194921 MsG0580024960.01.T01:CDS
GATATCAGCGAGTTGATCCT+TGG 0.494131 5:-12193295 None:intergenic
AGTGATAGACGGTCTACGTC+TGG 0.494442 5:+12192958 MsG0580024960.01.T01:CDS
AAACATGCAAGCTAAGTACT+TGG 0.495926 5:+12196271 MsG0580024960.01.T01:CDS
TATCTTTCCAGAGTTTCGTC+AGG 0.497269 5:+12194100 MsG0580024960.01.T01:CDS
TCGGCTTTAGAAGGCATATC+GGG 0.497897 5:+12196687 MsG0580024960.01.T01:CDS
TGGCATTATCATATTGTGAT+CGG 0.499192 5:+12197039 MsG0580024960.01.T01:CDS
TGAACTTCTTCACAAGTTGG+TGG 0.503711 5:+12194924 MsG0580024960.01.T01:CDS
GCCAATCAAGTACGTCAGAT+AGG 0.507056 5:-12196596 None:intergenic
GGGGAGCCCTATACTGATCC+AGG 0.507448 5:+12192700 MsG0580024960.01.T01:CDS
TTATCACACACAAGTTCCAT+TGG 0.508139 5:-12193147 None:intergenic
TGGCAATCTGCAAAATGAAA+TGG 0.508855 5:+12196328 MsG0580024960.01.T01:CDS
GGGCGTGGTAATATTTCGGT+TGG 0.509595 5:+12194694 MsG0580024960.01.T01:CDS
TCCTTGATCTGTTGAGCCGC+AGG 0.510060 5:+12197384 MsG0580024960.01.T01:CDS
CAATCATTTCTTCCCGCTAG+TGG 0.513275 5:-12198351 None:intergenic
GGATAGAATAAATGGAGCTC+AGG 0.513311 5:+12197409 MsG0580024960.01.T01:CDS
ACCTTTGTGTAATTTCAGAC+TGG 0.516556 5:-12194963 None:intergenic
AATTATTGGTGTCAGGGGCG+TGG 0.518943 5:+12194679 MsG0580024960.01.T01:intron
TCTTCCCGCTAGTGGACGAT+GGG 0.520632 5:-12198343 None:intergenic
TGCCCATGGTACTTGCTGGT+TGG 0.520887 5:+12198237 MsG0580024960.01.T01:three_prime_UTR
TGTGAAGAAATACTTCGAAA+AGG 0.521444 5:+12194841 MsG0580024960.01.T01:CDS
GTGAAGCTTCTTCCTAATCA+GGG 0.525519 5:+12192679 MsG0580024960.01.T01:CDS
AACTTACATATGTGACAAGA+TGG 0.525897 5:+12193347 MsG0580024960.01.T01:CDS
AAAGGAGGTTCTGATGATTC+CGG 0.526433 5:-12193265 None:intergenic
ATGAGAGGTGCAACGCTGAT+TGG 0.526663 5:-12193170 None:intergenic
GAACAATAGTTGTCTTTGGA+AGG 0.526784 5:-12194039 None:intergenic
TTCTTCCCGCTAGTGGACGA+TGG 0.527147 5:-12198344 None:intergenic
CAATCCCATCGTCCACTAGC+GGG 0.528135 5:+12198339 MsG0580024960.01.T01:three_prime_UTR
ATTGAGAAGGCTACTGCGGA+GGG 0.528197 5:+12194244 MsG0580024960.01.T01:CDS
AAATGAAAGCAGTGACCAAA+GGG 0.529020 5:+12198135 MsG0580024960.01.T01:CDS
GGCCCAAGGACTAACTAATC+CGG 0.529901 5:+12198311 MsG0580024960.01.T01:three_prime_UTR
AGATACTCAACAATGTCCTC+AGG 0.530213 5:-12194991 None:intergenic
CAAACCAGTTGAGACTCCTA+TGG 0.530675 5:+12192648 MsG0580024960.01.T01:CDS
ACCTGTAACTTAGTCTCCCT+CGG 0.533888 5:-12197446 None:intergenic
TTTGAATAACTGCATTCCAA+TGG 0.539057 5:-12192831 None:intergenic
TTGATCTGTTGAGCCGCAGG+TGG 0.540467 5:+12197387 MsG0580024960.01.T01:CDS
TATTCAGATGCTGATTGGGC+AGG 0.541937 5:+12192928 MsG0580024960.01.T01:CDS
CTTAGAGAGAAGATTATCAC+CGG 0.542434 5:+12193246 MsG0580024960.01.T01:CDS
GTCCAGTAAGAAGCAATGCT+TGG 0.549261 5:-12194762 None:intergenic
AACCTCCTTTGTCAATTCCA+AGG 0.551017 5:+12193278 MsG0580024960.01.T01:CDS
TATGAGTTCACCATATCAGC+TGG 0.551024 5:-12196230 None:intergenic
AGTGCTGCATTCTCGTCGGT+TGG 0.551147 5:-12194148 None:intergenic
TTATACAACACAGTTCGAAA+AGG 0.553785 5:-12198484 None:intergenic
TGGGAGCTATGAGGAGGCTG+TGG 0.553983 5:+12193955 MsG0580024960.01.T01:CDS
GTAAAGACAAGCCCCTTACC+AGG 0.554040 5:-12192877 None:intergenic
GTCTTTGGAAGGATAATGGA+TGG 0.554431 5:-12194028 None:intergenic
ACCTGCGGCTCAACAGATCA+AGG 0.554797 5:-12197385 None:intergenic
TCTTGATCACTGAACAGTTA+CGG 0.555310 5:-12197682 None:intergenic
ACCATCACTCTTGCTACTGT+CGG 0.559526 5:-12197312 None:intergenic
TCAGAGGAAAGCAGTTGTGA+AGG 0.560470 5:+12197998 MsG0580024960.01.T01:CDS
TTCAAGTGCTGCATTCTCGT+CGG 0.560647 5:-12194152 None:intergenic
AACACAGTTCGAAAAGGAGG+TGG 0.560969 5:-12198478 None:intergenic
TAAACTTGGTATCCGGCCCA+AGG 0.563714 5:+12198297 MsG0580024960.01.T01:three_prime_UTR
CTAACTGGAAAAGATATGTC+AGG 0.566097 5:-12192772 None:intergenic
CTAAATCTCTACGAGGTCCT+CGG 0.566863 5:+12193322 MsG0580024960.01.T01:CDS
TTCACATGTGGCATGAGCCA+TGG 0.567593 5:-12193073 None:intergenic
AGCTTCACATTAGGATCCAT+AGG 0.567890 5:-12192664 None:intergenic
TGACCAAAGGGTCTCAGTTG+AGG 0.573404 5:+12198147 MsG0580024960.01.T01:CDS
ATTGTAAATATTGGGTTACA+GGG 0.573758 5:+12198429 MsG0580024960.01.T01:three_prime_UTR
GTCGTATCTGGTACGACTGG+TGG 0.576104 5:-12192594 None:intergenic
GGATTAGTTAGTCCTTGGGC+CGG 0.577665 5:-12198309 None:intergenic
TCTCATTTCAAAGCTTGCTG+TGG 0.578557 5:-12197150 None:intergenic
AAAAGCTCAATAGTTTGGGA+TGG 0.580220 5:-12196191 None:intergenic
GTTAAAGGATCACCTGGTAA+GGG 0.583891 5:+12192865 MsG0580024960.01.T01:CDS
GAGAATTCCAGAACAAGTAT+GGG 0.584605 5:-12196146 None:intergenic
ATATTGGGTTACAGGGGTCA+GGG 0.584626 5:+12198436 MsG0580024960.01.T01:three_prime_UTR
GATGCAGCCGCTATGTGAGA+CGG 0.586279 5:+12196121 MsG0580024960.01.T01:intron
AAAATGAAAGCAGTGACCAA+AGG 0.587095 5:+12198134 MsG0580024960.01.T01:CDS
TGCGGAGATTGAGGGTGCAG+AGG 0.590744 5:+12197265 MsG0580024960.01.T01:CDS
TATGTCGTATCTGGTACGAC+TGG 0.591198 5:-12192597 None:intergenic
AGATATGTCAGGCCGAGTCA+TGG 0.593043 5:-12192761 None:intergenic
CACCAACCAGCAAGTACCAT+GGG 0.593789 5:-12198239 None:intergenic
CAGAGAACACATGCTATCGC+TGG 0.594960 5:-12198024 None:intergenic
AAGTACGTTAAAGGATCACC+TGG 0.596930 5:+12192859 MsG0580024960.01.T01:CDS
ATCCTTGGAATTGACAAAGG+AGG 0.596958 5:-12193280 None:intergenic
TCGTATCTGGTACGACTGGT+GGG 0.599144 5:-12192593 None:intergenic
ACAAGTGCAAGTCATTGCAC+CGG 0.604273 5:+12194893 MsG0580024960.01.T01:CDS
AGAAAACTTATACCCCAACT+AGG 0.606288 5:+12196652 MsG0580024960.01.T01:CDS
TGATCTGTTGAGCCGCAGGT+GGG 0.606981 5:+12197388 MsG0580024960.01.T01:CDS
TATTGAGAAGGCTACTGCGG+AGG 0.609202 5:+12194243 MsG0580024960.01.T01:CDS
TAGATTATCTCACCATGACT+CGG 0.609669 5:+12192749 MsG0580024960.01.T01:CDS
CATTTATTCTATCCCACCTG+CGG 0.610718 5:-12197400 None:intergenic
TACAACACAGTTCGAAAAGG+AGG 0.610835 5:-12198481 None:intergenic
CTCTACTATCATGCTTGATG+AGG 0.611072 5:+12197361 MsG0580024960.01.T01:CDS
TTGATCCTTGGAATTGACAA+AGG 0.612080 5:-12193283 None:intergenic
CAGGAGATGCAAGTGATAGA+CGG 0.615777 5:+12192947 MsG0580024960.01.T01:CDS
TGAAAATGGGAGCTATGAGG+AGG 0.616857 5:+12193949 MsG0580024960.01.T01:CDS
GCACGAGAGTGCTCCCGTTG+GGG 0.617314 5:-12198085 None:intergenic
GAGACAATGCCAGTTCATGT+TGG 0.626423 5:-12196791 None:intergenic
AAATATTTGCAGAAGAAGAG+AGG 0.627160 5:+12194214 MsG0580024960.01.T01:CDS
TTAAAGGATCACCTGGTAAG+GGG 0.627508 5:+12192866 MsG0580024960.01.T01:CDS
CAAAATACAGCCATTTCTAG+AGG 0.630041 5:+12197194 MsG0580024960.01.T01:CDS
CCACCAACCAGCAAGTACCA+TGG 0.632880 5:-12198240 None:intergenic
GTGCACGAGAGTGCTCCCGT+TGG 0.634412 5:-12198087 None:intergenic
GGACATTGTTGAGTATCTCA+AGG 0.638437 5:+12194996 MsG0580024960.01.T01:CDS
AGAGGCTGAGTATCGAGCCA+TGG 0.641631 5:+12193056 MsG0580024960.01.T01:CDS
TCAATCCCATCGTCCACTAG+CGG 0.647169 5:+12198338 MsG0580024960.01.T01:three_prime_UTR
TCTTCATATAAAGCATCTTG+AGG 0.647366 5:-12196741 None:intergenic
ACACAGTTCGAAAAGGAGGT+GGG 0.647379 5:-12198477 None:intergenic
AAGATGAACTGTATAGTCAG+AGG 0.648837 5:+12197982 MsG0580024960.01.T01:CDS
ACCGACAGTAGCAAGAGTGA+TGG 0.649366 5:+12197311 MsG0580024960.01.T01:CDS
GGTTGTCACAAGGAGAGTTG+AGG 0.649592 5:-12192810 None:intergenic
CAACCATAAAAGTTCACATG+TGG 0.650797 5:-12193085 None:intergenic
TACACAAAGGTTCAAGCCTG+AGG 0.651020 5:+12194975 MsG0580024960.01.T01:CDS
TGAAGCTTCTTCCTAATCAG+GGG 0.651711 5:+12192680 MsG0580024960.01.T01:CDS
GCATTCCAATGGTTGTCACA+AGG 0.655885 5:-12192820 None:intergenic
CCGAGGATCAAAGAAAATTG+CGG 0.658383 5:+12197247 MsG0580024960.01.T01:CDS
TGATGCGGATGAATTTAATG+AGG 0.663812 5:+12197334 MsG0580024960.01.T01:CDS
AGAGAAGTTGGACATTGATG+GGG 0.668723 5:+12194069 MsG0580024960.01.T01:CDS
TGGATAAAGAGAAAGCACAT+AGG 0.673745 5:-12194008 None:intergenic
GATGCGGATGAATTTAATGA+GGG 0.675828 5:+12197335 MsG0580024960.01.T01:CDS
TAGCAAGAGTGATGGTGATG+CGG 0.679498 5:+12197319 MsG0580024960.01.T01:CDS
TCACATATGTAAGTTATCCG+AGG 0.685011 5:-12193339 None:intergenic
GCCAGTCTGAAATTACACAA+AGG 0.698565 5:+12194962 MsG0580024960.01.T01:CDS
GAAGCTTCTTCCTAATCAGG+GGG 0.699032 5:+12192681 MsG0580024960.01.T01:CDS
TTGTAAATATTGGGTTACAG+GGG 0.700434 5:+12198430 MsG0580024960.01.T01:three_prime_UTR
ATGGGATCCGTCTCACATAG+CGG 0.707790 5:-12196128 None:intergenic
TGGGACAGAAGATATATGAG+TGG 0.712610 5:-12192574 None:intergenic
CATATCGGGATACAATCCAG+AGG 0.742394 5:+12196701 MsG0580024960.01.T01:CDS
TGTTGCTCGATCAAGTACAG+AGG 0.742953 5:+12193038 MsG0580024960.01.T01:CDS
ATCTTTACTAAATCTCTACG+AGG 0.751333 5:+12193315 MsG0580024960.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATACAATAAATACAATAAAT+AGG - Chr5:12193451-12193470 None:intergenic 10.0%
!! TACAATAAATACAATAAATA+GGG - Chr5:12193450-12193469 None:intergenic 10.0%
!! TTTAACAAATGATTATTTAT+TGG + Chr5:12195864-12195883 MsG0580024960.01.T01:intron 10.0%
!! AATATGTTCATTATATTATG+TGG - Chr5:12193554-12193573 None:intergenic 15.0%
!! ATATGTTCATTATATTATGT+GGG - Chr5:12193553-12193572 None:intergenic 15.0%
!! GAATATACAGTTATATATAT+AGG - Chr5:12193528-12193547 None:intergenic 15.0%
!! GTTTATAATAAAACATTATG+AGG + Chr5:12195436-12195455 MsG0580024960.01.T01:intron 15.0%
!! TATTAATCATATATAAGACA+TGG - Chr5:12196521-12196540 None:intergenic 15.0%
!!! AAGTTATCATTTTGAATTAT+TGG + Chr5:12194665-12194684 MsG0580024960.01.T01:intron 15.0%
!!! TTCTTTTAGTTGATTATAAT+GGG + Chr5:12195042-12195061 MsG0580024960.01.T01:intron 15.0%
!!! TTGATATTTCTAAATGATTA+AGG - Chr5:12194603-12194622 None:intergenic 15.0%
!!! TTGCATTTTTTTTTTAAACT+TGG + Chr5:12198283-12198302 MsG0580024960.01.T01:three_prime_UTR 15.0%
!! AAACTTAAATCCATACAAAA+CGG - Chr5:12196033-12196052 None:intergenic 20.0%
!! AACTAGGAAAAAATTATTGT+CGG + Chr5:12196668-12196687 MsG0580024960.01.T01:CDS 20.0%
!! AGCTTCAAGTAATTTATAAA+AGG - Chr5:12193837-12193856 None:intergenic 20.0%
!! TACTATCTAAAAAAAATCAG+TGG + Chr5:12198588-12198607 MsG0580024960.01.T01:three_prime_UTR 20.0%
!! TAGGTTTAAAAAAGTAAACA+AGG + Chr5:12194318-12194337 MsG0580024960.01.T01:CDS 20.0%
!! TTCTTGTGATTGTAAATATT+GGG + Chr5:12198421-12198440 MsG0580024960.01.T01:three_prime_UTR 20.0%
!! TTTCTAAATAGTTTCTCTTA+TGG - Chr5:12195383-12195402 None:intergenic 20.0%
!! TTTCTTGTGATTGTAAATAT+TGG + Chr5:12198420-12198439 MsG0580024960.01.T01:three_prime_UTR 20.0%
!!! ACAATAATTTTTTCCTAGTT+GGG - Chr5:12196668-12196687 None:intergenic 20.0%
!!! ATGCCATCTATTTAATATTT+TGG + Chr5:12197751-12197770 MsG0580024960.01.T01:intron 20.0%
!!! ATTGTTATTCATCAGTTTAA+AGG - Chr5:12196971-12196990 None:intergenic 20.0%
!!! CATATTATGATTCGTTTTTT+TGG - Chr5:12194179-12194198 None:intergenic 20.0%
!!! GTTCTTTTAGTTGATTATAA+TGG + Chr5:12195041-12195060 MsG0580024960.01.T01:intron 20.0%
!!! TACTTTTTTAAACCTATTGT+AGG - Chr5:12194314-12194333 None:intergenic 20.0%
!!! TGCCATCTATTTAATATTTT+GGG + Chr5:12197752-12197771 MsG0580024960.01.T01:intron 20.0%
!!! TTGTCAATAAAGCTTTATAT+GGG - Chr5:12194477-12194496 None:intergenic 20.0%
!!! TTTGTCAATAAAGCTTTATA+TGG - Chr5:12194478-12194497 None:intergenic 20.0%
!!! TTTTTTTTAAACTTGGTATC+CGG + Chr5:12198290-12198309 MsG0580024960.01.T01:three_prime_UTR 20.0%
! AACGAATCATAATATGCTTA+TGG + Chr5:12194183-12194202 MsG0580024960.01.T01:CDS 25.0%
! AATAATTCCTTCATGTGATA+AGG - Chr5:12195794-12195813 None:intergenic 25.0%
! AATAGATTTGCATAAGCAAT+AGG - Chr5:12197115-12197134 None:intergenic 25.0%
! AATATAGCTTGACAATCAAT+TGG - Chr5:12198200-12198219 None:intergenic 25.0%
! ACAATCATTATCATTACTGT+GGG - Chr5:12193790-12193809 None:intergenic 25.0%
! ACATGTTAATTGTTAGTAAG+TGG + Chr5:12195747-12195766 MsG0580024960.01.T01:intron 25.0%
! ACATTATATTCTTGTGCAAT+TGG + Chr5:12195675-12195694 MsG0580024960.01.T01:intron 25.0%
! ACTTAAATGCTCAACAAAAT+TGG + Chr5:12196625-12196644 MsG0580024960.01.T01:CDS 25.0%
! ATACAGTTATATATATAGGC+AGG - Chr5:12193524-12193543 None:intergenic 25.0%
! ATCTGAATATCCAATGATTT+CGG - Chr5:12192917-12192936 None:intergenic 25.0%
! ATGATTGTAACTTTCTTTAG+CGG + Chr5:12193802-12193821 MsG0580024960.01.T01:intron 25.0%
! ATGTTAATTGTTAGTAAGTG+GGG + Chr5:12195749-12195768 MsG0580024960.01.T01:intron 25.0%
! ATTGTAAATATTGGGTTACA+GGG + Chr5:12198429-12198448 MsG0580024960.01.T01:three_prime_UTR 25.0%
! CAAATTCTTAAGTACGTTAA+AGG + Chr5:12192850-12192869 MsG0580024960.01.T01:CDS 25.0%
! CATGTTAATTGTTAGTAAGT+GGG + Chr5:12195748-12195767 MsG0580024960.01.T01:intron 25.0%
! CTATCTGATTCAATAACTAT+AGG - Chr5:12195592-12195611 None:intergenic 25.0%
! CTTAAATGCTCAACAAAATT+GGG + Chr5:12196626-12196645 MsG0580024960.01.T01:CDS 25.0%
! GAAAGAAAAAAAACTTCATG+TGG - Chr5:12195704-12195723 None:intergenic 25.0%
! GATAATATCAACCAACAAAT+TGG - Chr5:12195646-12195665 None:intergenic 25.0%
! TACAATCATTATCATTACTG+TGG - Chr5:12193791-12193810 None:intergenic 25.0%
! TACACATGTTCCATTAATAT+GGG + Chr5:12193754-12193773 MsG0580024960.01.T01:intron 25.0%
!! AACAATTAACATGTCATTTC+CGG - Chr5:12195741-12195760 None:intergenic 25.0%
!! AATAGATGGCATTTTCATTA+CGG - Chr5:12197743-12197762 None:intergenic 25.0%
!! ATTAATCTTCCCTATTGATT+GGG + Chr5:12193482-12193501 MsG0580024960.01.T01:intron 25.0%
!! ATTTTGTTGAGCATTTAAGT+CGG - Chr5:12196625-12196644 None:intergenic 25.0%
!! CTTTCTTTTTCTTTTCTTTC+CGG + Chr5:12195719-12195738 MsG0580024960.01.T01:intron 25.0%
!! GACTTTAATTTCTTGAAACA+TGG - Chr5:12193637-12193656 None:intergenic 25.0%
!! GCCATCTATTTAATATTTTG+GGG + Chr5:12197753-12197772 MsG0580024960.01.T01:intron 25.0%
!! TTGGTGGAAATTTAATTTCA+TGG + Chr5:12192995-12193014 MsG0580024960.01.T01:CDS 25.0%
!! TTGTCAAGCTATATTGTTTT+AGG + Chr5:12198205-12198224 MsG0580024960.01.T01:three_prime_UTR 25.0%
!!! ATTTTGAATTATTGGTGTCA+GGG + Chr5:12194673-12194692 MsG0580024960.01.T01:intron 25.0%
!!! CAATAATTTTTTCCTAGTTG+GGG - Chr5:12196667-12196686 None:intergenic 25.0%
!!! CCATCTATTTAATATTTTGG+GGG + Chr5:12197754-12197773 MsG0580024960.01.T01:intron 25.0%
!!! CTTAGGAATTTTTTCATGTT+AGG + Chr5:12197539-12197558 MsG0580024960.01.T01:intron 25.0%
!!! GACAATAATTTTTTCCTAGT+TGG - Chr5:12196669-12196688 None:intergenic 25.0%
!!! TGTCAAGCTATATTGTTTTA+GGG + Chr5:12198206-12198225 MsG0580024960.01.T01:three_prime_UTR 25.0%
!!! TGTTTTAGGTTTTTCATGTT+TGG + Chr5:12195914-12195933 MsG0580024960.01.T01:intron 25.0%
!!! TTCATTTTTTTGTACAAGTG+TGG + Chr5:12196925-12196944 MsG0580024960.01.T01:intron 25.0%
!!! TTGCTAGATTTTTTTAGAGA+TGG - Chr5:12197086-12197105 None:intergenic 25.0%
AAAAATGAACCAACATGAAC+TGG + Chr5:12196782-12196801 MsG0580024960.01.T01:CDS 30.0%
AAAATGAACTCAAGTGCATT+TGG - Chr5:12196913-12196932 None:intergenic 30.0%
AAATATTTGCAGAAGAAGAG+AGG + Chr5:12194214-12194233 MsG0580024960.01.T01:CDS 30.0%
AAATGAACTCAAGTGCATTT+GGG - Chr5:12196912-12196931 None:intergenic 30.0%
AAATTCTCAATATGTGTGTG+TGG - Chr5:12197907-12197926 None:intergenic 30.0%
AACTTACATATGTGACAAGA+TGG + Chr5:12193347-12193366 MsG0580024960.01.T01:CDS 30.0%
AAGATCTAGAGATTAATGAG+TGG + Chr5:12195401-12195420 MsG0580024960.01.T01:intron 30.0%
ACAGAAAAAGCTCAATAGTT+TGG - Chr5:12196199-12196218 None:intergenic 30.0%
ACCATCTGTAAAAAGTAAAG+GGG + Chr5:12197223-12197242 MsG0580024960.01.T01:CDS 30.0%
AGATCTAGAGATTAATGAGT+GGG + Chr5:12195402-12195421 MsG0580024960.01.T01:intron 30.0%
AGGATTTGCAATCATTTCTT+GGG + Chr5:12197630-12197649 MsG0580024960.01.T01:intron 30.0%
ATAACTATGCATCCTACAAT+AGG + Chr5:12194299-12194318 MsG0580024960.01.T01:CDS 30.0%
ATATCATCTGTTTACTCTGA+TGG + Chr5:12196854-12196873 MsG0580024960.01.T01:intron 30.0%
ATCAGAAATGACAACATTAG+AGG + Chr5:12195204-12195223 MsG0580024960.01.T01:intron 30.0%
ATCTTTACTAAATCTCTACG+AGG + Chr5:12193315-12193334 MsG0580024960.01.T01:CDS 30.0%
ATTGTCTCTGTATGTTCATA+AGG + Chr5:12196806-12196825 MsG0580024960.01.T01:CDS 30.0%
CACCATCTGTAAAAAGTAAA+GGG + Chr5:12197222-12197241 MsG0580024960.01.T01:CDS 30.0%
CAGAAAAAGCTCAATAGTTT+GGG - Chr5:12196198-12196217 None:intergenic 30.0%
CATCACTTAACCCATATTAA+TGG - Chr5:12193767-12193786 None:intergenic 30.0%
CCCCCAAAATATTAAATAGA+TGG - Chr5:12197757-12197776 None:intergenic 30.0%
CGAGAATAAAATAAGTGTAG+TGG + Chr5:12195134-12195153 MsG0580024960.01.T01:intron 30.0%
CTTTATTGACAAATACACAC+AGG + Chr5:12194485-12194504 MsG0580024960.01.T01:intron 30.0%
GATTAATCTTCCCTATTGAT+TGG + Chr5:12193481-12193500 MsG0580024960.01.T01:intron 30.0%
GATTGTAAATATTGGGTTAC+AGG + Chr5:12198428-12198447 MsG0580024960.01.T01:three_prime_UTR 30.0%
GTACACATGTTCCATTAATA+TGG + Chr5:12193753-12193772 MsG0580024960.01.T01:intron 30.0%
TAGTACATATGCAGAATGAA+TGG + Chr5:12194547-12194566 MsG0580024960.01.T01:intron 30.0%
TAGTTAATCCCCAATCAATA+GGG - Chr5:12193494-12193513 None:intergenic 30.0%
TATAGACTAAAGAACTGTCT+CGG + Chr5:12195526-12195545 MsG0580024960.01.T01:intron 30.0%
TATCATCTGTTTACTCTGAT+GGG + Chr5:12196855-12196874 MsG0580024960.01.T01:intron 30.0%
TATGACATTGATATGCTAAC+AGG + Chr5:12195888-12195907 MsG0580024960.01.T01:intron 30.0%
TCAGAAATGACAACATTAGA+GGG + Chr5:12195205-12195224 MsG0580024960.01.T01:intron 30.0%
TCATGAACAATAGTTGTCTT+TGG - Chr5:12194046-12194065 None:intergenic 30.0%
TGGCATTATCATATTGTGAT+CGG + Chr5:12197039-12197058 MsG0580024960.01.T01:CDS 30.0%
TGTGAAGAAATACTTCGAAA+AGG + Chr5:12194841-12194860 MsG0580024960.01.T01:CDS 30.0%
TGTTAATTGTTAGTAAGTGG+GGG + Chr5:12195750-12195769 MsG0580024960.01.T01:intron 30.0%
TTATACAACACAGTTCGAAA+AGG - Chr5:12198487-12198506 None:intergenic 30.0%
TTGTAAATATTGGGTTACAG+GGG + Chr5:12198430-12198449 MsG0580024960.01.T01:three_prime_UTR 30.0%
TTTGAATAACTGCATTCCAA+TGG - Chr5:12192834-12192853 None:intergenic 30.0%
! ACCTCTTGCATCTTATTTAA+AGG + Chr5:12196356-12196375 MsG0580024960.01.T01:intron 30.0%
! ATAGATGGCATTTTCATTAC+GGG - Chr5:12197742-12197761 None:intergenic 30.0%
! ATCAGTTTTCCGTTTTCTTT+TGG + Chr5:12196392-12196411 MsG0580024960.01.T01:intron 30.0%
! ATGCTAACAGGAATTGTTTT+AGG + Chr5:12195900-12195919 MsG0580024960.01.T01:intron 30.0%
! CAATATGATAATGCCAATTC+TGG - Chr5:12197035-12197054 None:intergenic 30.0%
! CCCATTTTCAAAAAGATAGT+GGG - Chr5:12193939-12193958 None:intergenic 30.0%
! GAGAGGTAATTTTATTGAGA+AGG + Chr5:12194231-12194250 MsG0580024960.01.T01:CDS 30.0%
! TAGAAATGGCTGTATTTTGT+GGG - Chr5:12197193-12197212 None:intergenic 30.0%
! TCACTAGATTTTCTCAAAAG+AGG - Chr5:12197656-12197675 None:intergenic 30.0%
! TCCCATTTTCAAAAAGATAG+TGG - Chr5:12193940-12193959 None:intergenic 30.0%
! TCTGGTTATTGTGTTTTCTT+TGG + Chr5:12192976-12192995 MsG0580024960.01.T01:CDS 30.0%
! TCTTCATATAAAGCATCTTG+AGG - Chr5:12196744-12196763 None:intergenic 30.0%
! TGTTCAATTTCCGTTTTGTA+TGG + Chr5:12196020-12196039 MsG0580024960.01.T01:intron 30.0%
! TTAATCTTCCCTATTGATTG+GGG + Chr5:12193483-12193502 MsG0580024960.01.T01:intron 30.0%
! TTTGCTTTGCATTTTTCTGA+AGG + Chr5:12193874-12193893 MsG0580024960.01.T01:intron 30.0%
!! AAATTATTGTCGGCTTTAGA+AGG + Chr5:12196678-12196697 MsG0580024960.01.T01:CDS 30.0%
!! CATTTTGAATTATTGGTGTC+AGG + Chr5:12194672-12194691 MsG0580024960.01.T01:intron 30.0%
!! CCCACTATCTTTTTGAAAAT+GGG + Chr5:12193936-12193955 MsG0580024960.01.T01:CDS 30.0%
!! CTGGTCTAACTTATTTTCTT+AGG + Chr5:12197522-12197541 MsG0580024960.01.T01:intron 30.0%
!! GAACTTCATTTTTGTGAGAT+TGG + Chr5:12193123-12193142 MsG0580024960.01.T01:CDS 30.0%
!!! CACTTATTTTATTCTCGTGT+TGG - Chr5:12195131-12195150 None:intergenic 30.0%
!!! TACTTGTTATTTTCGAGTAC+AGG + Chr5:12197842-12197861 MsG0580024960.01.T01:intron 30.0%
!!! TTTTGAATTATTGGTGTCAG+GGG + Chr5:12194674-12194693 MsG0580024960.01.T01:intron 30.0%
AAAAGCTCAATAGTTTGGGA+TGG - Chr5:12196194-12196213 None:intergenic 35.0%
AAAATGAAAGCAGTGACCAA+AGG + Chr5:12198134-12198153 MsG0580024960.01.T01:CDS 35.0%
AAACATGCAAGCTAAGTACT+TGG + Chr5:12196271-12196290 MsG0580024960.01.T01:CDS 35.0%
AAAGAAAATTGCGGAGATTG+AGG + Chr5:12197256-12197275 MsG0580024960.01.T01:CDS 35.0%
AAATGAAAGCAGTGACCAAA+GGG + Chr5:12198135-12198154 MsG0580024960.01.T01:CDS 35.0%
AACCTATAGTAGAAAAGTGG+TGG + Chr5:12195247-12195266 MsG0580024960.01.T01:intron 35.0%
AACTTGCAACTTATGCCTTT+CGG + Chr5:12194424-12194443 MsG0580024960.01.T01:intron 35.0%
AAGAAAATTGCGGAGATTGA+GGG + Chr5:12197257-12197276 MsG0580024960.01.T01:CDS 35.0%
AAGATGAACTGTATAGTCAG+AGG + Chr5:12197982-12198001 MsG0580024960.01.T01:CDS 35.0%
AATACTAGTTAGCTCCTGAA+TGG + Chr5:12197803-12197822 MsG0580024960.01.T01:intron 35.0%
AATTCCTTCATGTGATAAGG+AGG - Chr5:12195791-12195810 None:intergenic 35.0%
ACCTTTGTGTAATTTCAGAC+TGG - Chr5:12194966-12194985 None:intergenic 35.0%
AGAAAACTTATACCCCAACT+AGG + Chr5:12196652-12196671 MsG0580024960.01.T01:CDS 35.0%
AGCAACCTATAGTAGAAAAG+TGG + Chr5:12195244-12195263 MsG0580024960.01.T01:intron 35.0%
ATAACCTCCTTATCACATGA+AGG + Chr5:12195784-12195803 MsG0580024960.01.T01:intron 35.0%
ATCATCTGTTTACTCTGATG+GGG + Chr5:12196856-12196875 MsG0580024960.01.T01:intron 35.0%
ATCTGCAAAATGAAATGGTG+AGG + Chr5:12196333-12196352 MsG0580024960.01.T01:intron 35.0%
ATGAATGAGAATGCCATATC+TGG + Chr5:12196308-12196327 MsG0580024960.01.T01:CDS 35.0%
ATGTGCGATGACAATGATTA+TGG + Chr5:12194388-12194407 MsG0580024960.01.T01:intron 35.0%
ATTCATCAGTTTAAAGGCCA+TGG - Chr5:12196965-12196984 None:intergenic 35.0%
CAACCATAAAAGTTCACATG+TGG - Chr5:12193088-12193107 None:intergenic 35.0%
CAGAAATGACAACATTAGAG+GGG + Chr5:12195206-12195225 MsG0580024960.01.T01:intron 35.0%
CAGGATTTGCAATCATTTCT+TGG + Chr5:12197629-12197648 MsG0580024960.01.T01:intron 35.0%
CCATCTGTAAAAAGTAAAGG+GGG + Chr5:12197224-12197243 MsG0580024960.01.T01:CDS 35.0%
CTAACTGGAAAAGATATGTC+AGG - Chr5:12192775-12192794 None:intergenic 35.0%
CTAGTTAATCCCCAATCAAT+AGG - Chr5:12193495-12193514 None:intergenic 35.0%
CTTAGAGAGAAGATTATCAC+CGG + Chr5:12193246-12193265 MsG0580024960.01.T01:CDS 35.0%
CTTCCACAACCAAAAGAAAA+CGG - Chr5:12196404-12196423 None:intergenic 35.0%
GAACAATAGTTGTCTTTGGA+AGG - Chr5:12194042-12194061 None:intergenic 35.0%
GACATGTAGATTCTGTAGTA+AGG + Chr5:12195304-12195323 MsG0580024960.01.T01:intron 35.0%
GAGAATTCCAGAACAAGTAT+GGG - Chr5:12196149-12196168 None:intergenic 35.0%
GATGCGGATGAATTTAATGA+GGG + Chr5:12197335-12197354 MsG0580024960.01.T01:CDS 35.0%
GCACCATCTGTAAAAAGTAA+AGG + Chr5:12197221-12197240 MsG0580024960.01.T01:CDS 35.0%
GCCTTTAAATAAGATGCAAG+AGG - Chr5:12196360-12196379 None:intergenic 35.0%
GGAACATGTGTACACATATA+GGG - Chr5:12193746-12193765 None:intergenic 35.0%
GGCATTATCATATTGTGATC+GGG + Chr5:12197040-12197059 MsG0580024960.01.T01:CDS 35.0%
GTTAATTGTTAGTAAGTGGG+GGG + Chr5:12195751-12195770 MsG0580024960.01.T01:intron 35.0%
GTTGAAGTTTATGAGTCTTC+TGG - Chr5:12196057-12196076 None:intergenic 35.0%
TAATCATTGTCATCGCACAT+TGG - Chr5:12194388-12194407 None:intergenic 35.0%
TAATGAGTGGGATCGAAATA+TGG + Chr5:12195414-12195433 MsG0580024960.01.T01:intron 35.0%
TAGATTATCTCACCATGACT+CGG + Chr5:12192749-12192768 MsG0580024960.01.T01:CDS 35.0%
TAGCTGCATCATTACGAAAA+AGG + Chr5:12197481-12197500 MsG0580024960.01.T01:intron 35.0%
TATTTGCCTGGATCAGTATA+GGG - Chr5:12192709-12192728 None:intergenic 35.0%
TCACATATGTAAGTTATCCG+AGG - Chr5:12193342-12193361 None:intergenic 35.0%
TCATGTGATAAGGAGGTTAT+GGG - Chr5:12195784-12195803 None:intergenic 35.0%
TCTTGAACTTCTTCACAAGT+TGG + Chr5:12194921-12194940 MsG0580024960.01.T01:CDS 35.0%
TCTTGATCACTGAACAGTTA+CGG - Chr5:12197685-12197704 None:intergenic 35.0%
TGAGAATTCCAGAACAAGTA+TGG - Chr5:12196150-12196169 None:intergenic 35.0%
TGATGCGGATGAATTTAATG+AGG + Chr5:12197334-12197353 MsG0580024960.01.T01:CDS 35.0%
TGGAAATATACCAGCTGATA+TGG + Chr5:12196220-12196239 MsG0580024960.01.T01:CDS 35.0%
TGGAACATGTGTACACATAT+AGG - Chr5:12193747-12193766 None:intergenic 35.0%
TGGCAATCTGCAAAATGAAA+TGG + Chr5:12196328-12196347 MsG0580024960.01.T01:CDS 35.0%
TGTGCGATGACAATGATTAT+GGG + Chr5:12194389-12194408 MsG0580024960.01.T01:intron 35.0%
TTAGGAAGAAGCTTCACATT+AGG - Chr5:12192676-12192695 None:intergenic 35.0%
TTATCACACACAAGTTCCAT+TGG - Chr5:12193150-12193169 None:intergenic 35.0%
TTCATGTGATAAGGAGGTTA+TGG - Chr5:12195785-12195804 None:intergenic 35.0%
TTGATCCTTGGAATTGACAA+AGG - Chr5:12193286-12193305 None:intergenic 35.0%
TTGGATATTCAGATGCTGAT+TGG + Chr5:12192923-12192942 MsG0580024960.01.T01:CDS 35.0%
TTTGTACAGTGAATCCATTC+AGG - Chr5:12197820-12197839 None:intergenic 35.0%
! AAATAAGTGTAGTGGAGATG+AGG + Chr5:12195142-12195161 MsG0580024960.01.T01:intron 35.0%
! AACTGACTTACTACACTAAC+TGG - Chr5:12192790-12192809 None:intergenic 35.0%
! AGAAATGGCTGTATTTTGTG+GGG - Chr5:12197192-12197211 None:intergenic 35.0%
! AGTTGTCTTTGGAAGGATAA+TGG - Chr5:12194035-12194054 None:intergenic 35.0%
! ATGCCACATGTGAACTTTTA+TGG + Chr5:12193082-12193101 MsG0580024960.01.T01:CDS 35.0%
! ATGGTTGAAGCATTTACTTC+AGG + Chr5:12193101-12193120 MsG0580024960.01.T01:CDS 35.0%
! ATTTTGCAGATTGCCAGATA+TGG - Chr5:12196324-12196343 None:intergenic 35.0%
! CAAAATACAGCCATTTCTAG+AGG + Chr5:12197194-12197213 MsG0580024960.01.T01:CDS 35.0%
! CACTAGTCCCTATTTTCTTT+CGG - Chr5:12198052-12198071 None:intergenic 35.0%
! CTAGAAATGGCTGTATTTTG+TGG - Chr5:12197194-12197213 None:intergenic 35.0%
! CTATTGATTGGGGATTAACT+AGG + Chr5:12193493-12193512 MsG0580024960.01.T01:intron 35.0%
! GGTTATTGTGTTTTCTTTGG+TGG + Chr5:12192979-12192998 MsG0580024960.01.T01:CDS 35.0%
! GTACCAGATACGACATATTT+TGG + Chr5:12192603-12192622 MsG0580024960.01.T01:CDS 35.0%
! TAGCAAGAGCATGATTCAAT+TGG + Chr5:12197945-12197964 MsG0580024960.01.T01:intron 35.0%
! TAGTAGAAAAGTGGTGGAAA+CGG + Chr5:12195253-12195272 MsG0580024960.01.T01:intron 35.0%
! TGGATAAAGAGAAAGCACAT+AGG - Chr5:12194011-12194030 None:intergenic 35.0%
! TGGATATTCAGATGCTGATT+GGG + Chr5:12192924-12192943 MsG0580024960.01.T01:CDS 35.0%
! TTTTATTGAGAAGGCTACTG+CGG + Chr5:12194240-12194259 MsG0580024960.01.T01:CDS 35.0%
!! AAGTACTTAGCTTGCATGTT+TGG - Chr5:12196272-12196291 None:intergenic 35.0%
!! AAGTTTTGTAAAAGCTCAGC+TGG + Chr5:12196460-12196479 MsG0580024960.01.T01:intron 35.0%
!! ACTATTGAGCTTTTTCTGTC+TGG + Chr5:12196200-12196219 MsG0580024960.01.T01:CDS 35.0%
!! GCAGCTTTAGAAATACTAAG+AGG + Chr5:12194793-12194812 MsG0580024960.01.T01:CDS 35.0%
!! GCCCACTATCTTTTTGAAAA+TGG + Chr5:12193935-12193954 MsG0580024960.01.T01:CDS 35.0%
!! TGATTATAATGGGCTGTTAC+CGG + Chr5:12195052-12195071 MsG0580024960.01.T01:intron 35.0%
!! TTCCACCACTTTTCTACTAT+AGG - Chr5:12195252-12195271 None:intergenic 35.0%
!! TTTCCGTTTTCTTTTGGTTG+TGG + Chr5:12196398-12196417 MsG0580024960.01.T01:intron 35.0%
!! TTTTGAAAATGGGAGCTATG+AGG + Chr5:12193946-12193965 MsG0580024960.01.T01:CDS 35.0%
!! TTTTTGTGAGATTGGTCCAA+TGG + Chr5:12193131-12193150 MsG0580024960.01.T01:CDS 35.0%
!!! GAAGTTGTTTTAGATGCAGT+TGG + Chr5:12194274-12194293 MsG0580024960.01.T01:CDS 35.0%
!!! GACACGTCAACTATTTTTAC+TGG + Chr5:12197503-12197522 MsG0580024960.01.T01:intron 35.0%
!!! TGATTCAATTGGTTTTGCAC+AGG + Chr5:12197956-12197975 MsG0580024960.01.T01:intron 35.0%
AAACCTTCATGAAGAGTGAG+TGG - Chr5:12195620-12195639 None:intergenic 40.0%
AACCTCCTTTGTCAATTCCA+AGG + Chr5:12193278-12193297 MsG0580024960.01.T01:CDS 40.0%
AAGTACGTTAAAGGATCACC+TGG + Chr5:12192859-12192878 MsG0580024960.01.T01:CDS 40.0%
ACCTATCTGACGTACTTGAT+TGG + Chr5:12196595-12196614 MsG0580024960.01.T01:CDS 40.0%
ACTAAAGAACTGTCTCGGTT+TGG + Chr5:12195531-12195550 MsG0580024960.01.T01:intron 40.0%
AGAGAAGTTGGACATTGATG+GGG + Chr5:12194069-12194088 MsG0580024960.01.T01:CDS 40.0%
AGATACTCAACAATGTCCTC+AGG - Chr5:12194994-12195013 None:intergenic 40.0%
AGCTTCACATTAGGATCCAT+AGG - Chr5:12192667-12192686 None:intergenic 40.0%
ATATGACCAGCGATGTTGTA+TGG + Chr5:12195082-12195101 MsG0580024960.01.T01:intron 40.0%
ATCAATAGTGTGTGTGCATG+CGG - Chr5:12194520-12194539 None:intergenic 40.0%
ATCCTTGGAATTGACAAAGG+AGG - Chr5:12193283-12193302 None:intergenic 40.0%
ATGGTGATTGATGAAGCTGT+TGG + Chr5:12194566-12194585 MsG0580024960.01.T01:intron 40.0%
CAGAGAAGTTGGACATTGAT+GGG + Chr5:12194068-12194087 MsG0580024960.01.T01:CDS 40.0%
CATTTATTCTATCCCACCTG+CGG - Chr5:12197403-12197422 None:intergenic 40.0%
CCGAGGATCAAAGAAAATTG+CGG + Chr5:12197247-12197266 MsG0580024960.01.T01:CDS 40.0%
CCTCCAAAATATGTCGTATC+TGG - Chr5:12192609-12192628 None:intergenic 40.0%
CTAACTTTCCGACAAGTCTT+CGG - Chr5:12192732-12192751 None:intergenic 40.0%
CTCCCTCGGTAAAAGTTTAA+GGG - Chr5:12197435-12197454 None:intergenic 40.0%
CTCTACTATCATGCTTGATG+AGG + Chr5:12197361-12197380 MsG0580024960.01.T01:CDS 40.0%
CTCTGTGCCGAAAGAAAATA+GGG + Chr5:12198042-12198061 MsG0580024960.01.T01:CDS 40.0%
GGACATTGTTGAGTATCTCA+AGG + Chr5:12194996-12195015 MsG0580024960.01.T01:CDS 40.0%
GGATAGAATAAATGGAGCTC+AGG + Chr5:12197409-12197428 MsG0580024960.01.T01:CDS 40.0%
GTAGCTTCATGTTCCAGAAT+TGG + Chr5:12197019-12197038 MsG0580024960.01.T01:intron 40.0%
GTATTTGCCTGGATCAGTAT+AGG - Chr5:12192710-12192729 None:intergenic 40.0%
GTCAGGTGTTTCAGATGATA+TGG + Chr5:12194117-12194136 MsG0580024960.01.T01:CDS 40.0%
GTGAAGCTTCTTCCTAATCA+GGG + Chr5:12192679-12192698 MsG0580024960.01.T01:CDS 40.0%
GTTAAAGGATCACCTGGTAA+GGG + Chr5:12192865-12192884 MsG0580024960.01.T01:CDS 40.0%
TAAGTGCATCTGTAATCTGC+AGG + Chr5:12197610-12197629 MsG0580024960.01.T01:intron 40.0%
TACAACACAGTTCGAAAAGG+AGG - Chr5:12198484-12198503 None:intergenic 40.0%
TATCTTTCCAGAGTTTCGTC+AGG + Chr5:12194100-12194119 MsG0580024960.01.T01:CDS 40.0%
TATGAGTTCACCATATCAGC+TGG - Chr5:12196233-12196252 None:intergenic 40.0%
TCCAGTATATCTAGATGCAG+AGG - Chr5:12195957-12195976 None:intergenic 40.0%
TCCTCTGCATCTAGATATAC+TGG + Chr5:12195953-12195972 MsG0580024960.01.T01:intron 40.0%
TCTCCCTCGGTAAAAGTTTA+AGG - Chr5:12197436-12197455 None:intergenic 40.0%
TCTCTGTGCCGAAAGAAAAT+AGG + Chr5:12198041-12198060 MsG0580024960.01.T01:CDS 40.0%
TCTGTAGTAAGGAGAGTAGA+TGG + Chr5:12195315-12195334 MsG0580024960.01.T01:intron 40.0%
TGAAGCTTCTTCCTAATCAG+GGG + Chr5:12192680-12192699 MsG0580024960.01.T01:CDS 40.0%
TGGCACTGTCATATAAACCA+TGG + Chr5:12196945-12196964 MsG0580024960.01.T01:intron 40.0%
TGGGACAGAAGATATATGAG+TGG - Chr5:12192577-12192596 None:intergenic 40.0%
TGGTGATTGATGAAGCTGTT+GGG + Chr5:12194567-12194586 MsG0580024960.01.T01:intron 40.0%
TGTGAAGCTTCTTCCTAATC+AGG + Chr5:12192678-12192697 MsG0580024960.01.T01:CDS 40.0%
TTAAAGGATCACCTGGTAAG+GGG + Chr5:12192866-12192885 MsG0580024960.01.T01:CDS 40.0%
TTGATTGGGGATTAACTAGG+AGG + Chr5:12193496-12193515 MsG0580024960.01.T01:intron 40.0%
TTTGTCCTCTCGTGAAAAAC+TGG - Chr5:12193201-12193220 None:intergenic 40.0%
! AAAGGAGGTTCTGATGATTC+CGG - Chr5:12193268-12193287 None:intergenic 40.0%
! ATTCTCGGTTTTTGATCTGG+TGG + Chr5:12196092-12196111 MsG0580024960.01.T01:intron 40.0%
! CCGCAATTTTCTTTGATCCT+CGG - Chr5:12197250-12197269 None:intergenic 40.0%
! CTCACTCTTCATGAAGGTTT+TGG + Chr5:12195620-12195639 MsG0580024960.01.T01:intron 40.0%
! CTGATTCTCGGTTTTTGATC+TGG + Chr5:12196089-12196108 MsG0580024960.01.T01:intron 40.0%
! GAAAAACTGGATTGGATGAG+AGG - Chr5:12193188-12193207 None:intergenic 40.0%
! GAAGAGCGTGCAATATTGTT+GGG + Chr5:12196759-12196778 MsG0580024960.01.T01:CDS 40.0%
! GCCAGTCTGAAATTACACAA+AGG + Chr5:12194962-12194981 MsG0580024960.01.T01:CDS 40.0%
! GGTAATATTTCGGTTGGTTC+TGG + Chr5:12194700-12194719 MsG0580024960.01.T01:CDS 40.0%
! TGAACTTCTTCACAAGTTGG+TGG + Chr5:12194924-12194943 MsG0580024960.01.T01:CDS 40.0%
! TGAAGAGCGTGCAATATTGT+TGG + Chr5:12196758-12196777 MsG0580024960.01.T01:CDS 40.0%
! TGACGAAACTCTGGAAAGAT+AGG - Chr5:12194101-12194120 None:intergenic 40.0%
! TTCTCGGTTTTTGATCTGGT+GGG + Chr5:12196093-12196112 MsG0580024960.01.T01:intron 40.0%
!! CCAGATACGACATATTTTGG+AGG + Chr5:12192606-12192625 MsG0580024960.01.T01:CDS 40.0%
!! CTTTTGGTTGTGGAAGAGAA+GGG + Chr5:12196408-12196427 MsG0580024960.01.T01:intron 40.0%
!! GAAGGTTTTGGCCAATTTGT+TGG + Chr5:12195632-12195651 MsG0580024960.01.T01:intron 40.0%
!! GTCTTTGGAAGGATAATGGA+TGG - Chr5:12194031-12194050 None:intergenic 40.0%
!! TCTCATTTCAAAGCTTGCTG+TGG - Chr5:12197153-12197172 None:intergenic 40.0%
!! TCTTTTGGTTGTGGAAGAGA+AGG + Chr5:12196407-12196426 MsG0580024960.01.T01:intron 40.0%
!! TTTTAGAGATGGCTGATGCA+TGG - Chr5:12197075-12197094 None:intergenic 40.0%
!!! AGAAGGGTTGGGTTTTTTCA+TGG + Chr5:12196424-12196443 MsG0580024960.01.T01:intron 40.0%
!!! CCCCCTTTACTTTTTACAGA+TGG - Chr5:12197227-12197246 None:intergenic 40.0%
!!! TTAGGGTCTTTTTTTGCCCA+TGG + Chr5:12198223-12198242 MsG0580024960.01.T01:three_prime_UTR 40.0%
AACACAGTTCGAAAAGGAGG+TGG - Chr5:12198481-12198500 None:intergenic 45.0%
AACTTATGCCTTTCGGTTGG+AGG + Chr5:12194431-12194450 MsG0580024960.01.T01:intron 45.0%
AATATTGGGTTACAGGGGTC+AGG + Chr5:12198435-12198454 MsG0580024960.01.T01:three_prime_UTR 45.0%
ACAAGTCTTCGGTATTTGCC+TGG - Chr5:12192721-12192740 None:intergenic 45.0%
ACAAGTGCAAGTCATTGCAC+CGG + Chr5:12194893-12194912 MsG0580024960.01.T01:CDS 45.0%
ACACAGTTCGAAAAGGAGGT+GGG - Chr5:12198480-12198499 None:intergenic 45.0%
ACCAGCGATGTTGTATGGAA+CGG + Chr5:12195087-12195106 MsG0580024960.01.T01:intron 45.0%
ACCATCACTCTTGCTACTGT+CGG - Chr5:12197315-12197334 None:intergenic 45.0%
ACCTGTAACTTAGTCTCCCT+CGG - Chr5:12197449-12197468 None:intergenic 45.0%
ACTCTCCTTGTGACAACCAT+TGG + Chr5:12192815-12192834 MsG0580024960.01.T01:CDS 45.0%
ACTCTGATGGGGAGTTTCTT+TGG + Chr5:12196867-12196886 MsG0580024960.01.T01:intron 45.0%
AGAGGCAACACCGAAATCAT+TGG + Chr5:12192904-12192923 MsG0580024960.01.T01:CDS 45.0%
AGTCCACTCACTCTTCATGA+AGG + Chr5:12195614-12195633 MsG0580024960.01.T01:intron 45.0%
ATATTGGGTTACAGGGGTCA+GGG + Chr5:12198436-12198455 MsG0580024960.01.T01:three_prime_UTR 45.0%
ATGAGGATGTTGCGTTGGAT+AGG + Chr5:12195159-12195178 MsG0580024960.01.T01:intron 45.0%
ATGTGTATGCACCACCTTGA+GGG + Chr5:12193379-12193398 MsG0580024960.01.T01:intron 45.0%
ATTACGGGATGCTTACCTGA+AGG - Chr5:12197727-12197746 None:intergenic 45.0%
ATTAGAGGGGAGAGAGAGTT+GGG + Chr5:12195219-12195238 MsG0580024960.01.T01:intron 45.0%
CAAACCAGTTGAGACTCCTA+TGG + Chr5:12192648-12192667 MsG0580024960.01.T01:CDS 45.0%
CAATCATTTCTTCCCGCTAG+TGG - Chr5:12198354-12198373 None:intergenic 45.0%
CAGGAGATGCAAGTGATAGA+CGG + Chr5:12192947-12192966 MsG0580024960.01.T01:CDS 45.0%
CATATCGGGATACAATCCAG+AGG + Chr5:12196701-12196720 MsG0580024960.01.T01:CDS 45.0%
CCAGAGAAGTTGGACATTGA+TGG + Chr5:12194067-12194086 MsG0580024960.01.T01:CDS 45.0%
CCATCAATGTCCAACTTCTC+TGG - Chr5:12194070-12194089 None:intergenic 45.0%
CCTCTCGTGAAAAACTGGAT+TGG - Chr5:12193196-12193215 None:intergenic 45.0%
CGCAGGTGGGATAGAATAAA+TGG + Chr5:12197401-12197420 MsG0580024960.01.T01:CDS 45.0%
CGCTGGTCATATAGTATTGC+CGG - Chr5:12195074-12195093 None:intergenic 45.0%
CGTTAAAGGATCACCTGGTA+AGG + Chr5:12192864-12192883 MsG0580024960.01.T01:CDS 45.0%
CTAAATCTCTACGAGGTCCT+CGG + Chr5:12193322-12193341 MsG0580024960.01.T01:CDS 45.0%
GAAGAAGTTCAAGAGCTTGC+CGG - Chr5:12194915-12194934 None:intergenic 45.0%
GAAGCTTCTTCCTAATCAGG+GGG + Chr5:12192681-12192700 MsG0580024960.01.T01:CDS 45.0%
GAGACAATGCCAGTTCATGT+TGG - Chr5:12196794-12196813 None:intergenic 45.0%
GAGGATAGTCAGATCACTAG+AGG + Chr5:12195337-12195356 MsG0580024960.01.T01:intron 45.0%
GATAGGTGGCAAGACTAGAT+AGG + Chr5:12195176-12195195 MsG0580024960.01.T01:intron 45.0%
GCATTCCAATGGTTGTCACA+AGG - Chr5:12192823-12192842 None:intergenic 45.0%
GCCAATCAAGTACGTCAGAT+AGG - Chr5:12196599-12196618 None:intergenic 45.0%
GGCAAATACCGAAGACTTGT+CGG + Chr5:12192721-12192740 MsG0580024960.01.T01:CDS 45.0%
GGGCTTGTCTTTACTGATAG+AGG + Chr5:12192886-12192905 MsG0580024960.01.T01:CDS 45.0%
GTAGTAAGGAGAGTAGATGG+AGG + Chr5:12195318-12195337 MsG0580024960.01.T01:intron 45.0%
GTCCAGTAAGAAGCAATGCT+TGG - Chr5:12194765-12194784 None:intergenic 45.0%
GTGGCAAGACTAGATAGGAT+AGG + Chr5:12195181-12195200 MsG0580024960.01.T01:intron 45.0%
TACACAAAGGTTCAAGCCTG+AGG + Chr5:12194975-12194994 MsG0580024960.01.T01:CDS 45.0%
TATGTCGTATCTGGTACGAC+TGG - Chr5:12192600-12192619 None:intergenic 45.0%
TCAGAGGAAAGCAGTTGTGA+AGG + Chr5:12197998-12198017 MsG0580024960.01.T01:CDS 45.0%
TCAGTGACGCTTCTGATTCT+CGG + Chr5:12196077-12196096 MsG0580024960.01.T01:intron 45.0%
TGAAAATGGGAGCTATGAGG+AGG + Chr5:12193949-12193968 MsG0580024960.01.T01:CDS 45.0%
TGAAACACCTGACGAAACTC+TGG - Chr5:12194110-12194129 None:intergenic 45.0%
TGCAACTTATGCCTTTCGGT+TGG + Chr5:12194428-12194447 MsG0580024960.01.T01:intron 45.0%
TGTTCATGAGCCAGAGAAGT+TGG + Chr5:12194057-12194076 MsG0580024960.01.T01:CDS 45.0%
TGTTGCTCGATCAAGTACAG+AGG + Chr5:12193038-12193057 MsG0580024960.01.T01:CDS 45.0%
TGTTGTATGGAACGGAGTGT+TGG + Chr5:12195095-12195114 MsG0580024960.01.T01:intron 45.0%
TTTGGAGGAGACAGGTCTTA+CGG + Chr5:12192621-12192640 MsG0580024960.01.T01:CDS 45.0%
! AAAAGTGGTGGAAACGGCTT+AGG + Chr5:12195259-12195278 MsG0580024960.01.T01:intron 45.0%
! AAGCTTTATCCCACTAGGTG+GGG - Chr5:12195483-12195502 None:intergenic 45.0%
! AGGCCCTTAAACTTTTACCG+AGG + Chr5:12197429-12197448 MsG0580024960.01.T01:CDS 45.0%
! CAACCAAGCTTTATCCCACT+AGG - Chr5:12195488-12195507 None:intergenic 45.0%
! CAAGCTTTATCCCACTAGGT+GGG - Chr5:12195484-12195503 None:intergenic 45.0%
! CCAATCCAGTTTTTCACGAG+AGG + Chr5:12193193-12193212 MsG0580024960.01.T01:CDS 45.0%
! CTCCAAGCATTGCTTCTTAC+TGG + Chr5:12194760-12194779 MsG0580024960.01.T01:CDS 45.0%
! GGAAACGGCTTAGGTTGTTT+GGG + Chr5:12195268-12195287 MsG0580024960.01.T01:intron 45.0%
! GGCCCTTAAACTTTTACCGA+GGG + Chr5:12197430-12197449 MsG0580024960.01.T01:CDS 45.0%
! GTTGTATGGAACGGAGTGTT+GGG + Chr5:12195096-12195115 MsG0580024960.01.T01:intron 45.0%
! TAGCAAGAGTGATGGTGATG+CGG + Chr5:12197319-12197338 MsG0580024960.01.T01:CDS 45.0%
! TATTCAGATGCTGATTGGGC+AGG + Chr5:12192928-12192947 MsG0580024960.01.T01:CDS 45.0%
! TCAGGGGCGTGGTAATATTT+CGG + Chr5:12194690-12194709 MsG0580024960.01.T01:intron 45.0%
! TGGAAACGGCTTAGGTTGTT+TGG + Chr5:12195267-12195286 MsG0580024960.01.T01:intron 45.0%
! TGGTGCACTACCTCTAGAAA+TGG - Chr5:12197207-12197226 None:intergenic 45.0%
! TTAGTTAGCCTCCAACCGAA+AGG - Chr5:12194442-12194461 None:intergenic 45.0%
! TTCAAGTGCTGCATTCTCGT+CGG - Chr5:12194155-12194174 None:intergenic 45.0%
! TTTTTGCCCATGGTACTTGC+TGG + Chr5:12198233-12198252 MsG0580024960.01.T01:three_prime_UTR 45.0%
!! ACTGTCTCGGTTTGGTTCAT+AGG + Chr5:12195539-12195558 MsG0580024960.01.T01:intron 45.0%
!! CGACATATTTTGGAGGAGAC+AGG + Chr5:12192613-12192632 MsG0580024960.01.T01:CDS 45.0%
!! CTCCGGATTAGTTAGTCCTT+GGG - Chr5:12198316-12198335 None:intergenic 45.0%
!! GATATCAGCGAGTTGATCCT+TGG - Chr5:12193298-12193317 None:intergenic 45.0%
!! GTCGGCTTTAGAAGGCATAT+CGG + Chr5:12196686-12196705 MsG0580024960.01.T01:CDS 45.0%
!! GTTTTTGCTGTCTACCCCAA+CGG + Chr5:12198071-12198090 MsG0580024960.01.T01:CDS 45.0%
!! TCGGCTTTAGAAGGCATATC+GGG + Chr5:12196687-12196706 MsG0580024960.01.T01:CDS 45.0%
!! TCTCCGGATTAGTTAGTCCT+TGG - Chr5:12198317-12198336 None:intergenic 45.0%
!! TTTTTGCTGTCTACCCCAAC+GGG + Chr5:12198072-12198091 MsG0580024960.01.T01:CDS 45.0%
!!! ATTTTCGAGTACAGGCACTG+TGG + Chr5:12197850-12197869 MsG0580024960.01.T01:intron 45.0%
!!! TTTTCGAGTACAGGCACTGT+GGG + Chr5:12197851-12197870 MsG0580024960.01.T01:intron 45.0%
ACCGACAGTAGCAAGAGTGA+TGG + Chr5:12197311-12197330 MsG0580024960.01.T01:CDS 50.0%
ACCGAGGGAGACTAAGTTAC+AGG + Chr5:12197445-12197464 MsG0580024960.01.T01:CDS 50.0%
AGATATGTCAGGCCGAGTCA+TGG - Chr5:12192764-12192783 None:intergenic 50.0%
AGGATGTTGCGTTGGATAGG+TGG + Chr5:12195162-12195181 MsG0580024960.01.T01:intron 50.0%
AGTCAGATCACTAGAGGCAG+AGG + Chr5:12195343-12195362 MsG0580024960.01.T01:intron 50.0%
AGTGATAGACGGTCTACGTC+TGG + Chr5:12192958-12192977 MsG0580024960.01.T01:CDS 50.0%
ATGGGATCCGTCTCACATAG+CGG - Chr5:12196131-12196150 None:intergenic 50.0%
ATTGAGAAGGCTACTGCGGA+GGG + Chr5:12194244-12194263 MsG0580024960.01.T01:CDS 50.0%
CACCAACCAGCAAGTACCAT+GGG - Chr5:12198242-12198261 None:intergenic 50.0%
CAGAGAACACATGCTATCGC+TGG - Chr5:12198027-12198046 None:intergenic 50.0%
CATTAGAGGGGAGAGAGAGT+TGG + Chr5:12195218-12195237 MsG0580024960.01.T01:intron 50.0%
CCACCTAGTGGGATAAAGCT+TGG + Chr5:12195482-12195501 MsG0580024960.01.T01:intron 50.0%
CTTCCTCAACTGAGACCCTT+TGG - Chr5:12198153-12198172 None:intergenic 50.0%
GACGGATCCCATACTTGTTC+TGG + Chr5:12196139-12196158 MsG0580024960.01.T01:CDS 50.0%
GATGTGTATGCACCACCTTG+AGG + Chr5:12193378-12193397 MsG0580024960.01.T01:intron 50.0%
GGATCCATAGGAGTCTCAAC+TGG - Chr5:12192655-12192674 None:intergenic 50.0%
GGCCCAAGGACTAACTAATC+CGG + Chr5:12198311-12198330 MsG0580024960.01.T01:three_prime_UTR 50.0%
GGGCGTGGTAATATTTCGGT+TGG + Chr5:12194694-12194713 MsG0580024960.01.T01:CDS 50.0%
GGGGGAGTTTGTACGATTGA+TGG + Chr5:12197772-12197791 MsG0580024960.01.T01:intron 50.0%
GGTTGTCACAAGGAGAGTTG+AGG - Chr5:12192813-12192832 None:intergenic 50.0%
GGTTGTGGAAGAGAAGGGTT+GGG + Chr5:12196413-12196432 MsG0580024960.01.T01:intron 50.0%
GTAAAAAGTAAAGGGGGCCG+AGG + Chr5:12197230-12197249 MsG0580024960.01.T01:CDS 50.0%
GTAAAGACAAGCCCCTTACC+AGG - Chr5:12192880-12192899 None:intergenic 50.0%
TAAACTTGGTATCCGGCCCA+AGG + Chr5:12198297-12198316 MsG0580024960.01.T01:three_prime_UTR 50.0%
TAGGAGCTAGGAAGCAGTAG+TGG + Chr5:12195558-12195577 MsG0580024960.01.T01:intron 50.0%
TATCTCAACACTCCCCCTCA+AGG - Chr5:12193396-12193415 None:intergenic 50.0%
TATTGAGAAGGCTACTGCGG+AGG + Chr5:12194243-12194262 MsG0580024960.01.T01:CDS 50.0%
TCAATCCCATCGTCCACTAG+CGG + Chr5:12198338-12198357 MsG0580024960.01.T01:three_prime_UTR 50.0%
TCCGTTCCATACAACATCGC+TGG - Chr5:12195091-12195110 None:intergenic 50.0%
TCGTATCTGGTACGACTGGT+GGG - Chr5:12192596-12192615 None:intergenic 50.0%
TGACCAAAGGGTCTCAGTTG+AGG + Chr5:12198147-12198166 MsG0580024960.01.T01:CDS 50.0%
TGGAGATGAGGATGTTGCGT+TGG + Chr5:12195154-12195173 MsG0580024960.01.T01:intron 50.0%
TGGTTGTGGAAGAGAAGGGT+TGG + Chr5:12196412-12196431 MsG0580024960.01.T01:intron 50.0%
TGTGTATGCACCACCTTGAG+GGG + Chr5:12193380-12193399 MsG0580024960.01.T01:intron 50.0%
TTCACATGTGGCATGAGCCA+TGG - Chr5:12193076-12193095 None:intergenic 50.0%
TTTATCCCACTAGGTGGGGT+CGG - Chr5:12195479-12195498 None:intergenic 50.0%
! ATGAGAGGTGCAACGCTGAT+TGG - Chr5:12193173-12193192 None:intergenic 50.0%
! CCAAGCTTTATCCCACTAGG+TGG - Chr5:12195485-12195504 None:intergenic 50.0%
! GGACGATGGGATTGATTCTC+CGG - Chr5:12198333-12198352 None:intergenic 50.0%
! TGCATTCTCGTCGGTTGGTA+AGG - Chr5:12194146-12194165 None:intergenic 50.0%
!! AAGCTTGCTGTGGTCTTTCG+AGG - Chr5:12197143-12197162 None:intergenic 50.0%
!! AATTATTGGTGTCAGGGGCG+TGG + Chr5:12194679-12194698 MsG0580024960.01.T01:intron 50.0%
!! CGGTTTGGTTCATAGGAGCT+AGG + Chr5:12195546-12195565 MsG0580024960.01.T01:intron 50.0%
!! GCATTCTCGTCGGTTGGTAA+GGG - Chr5:12194145-12194164 None:intergenic 50.0%
!! GGATTAGTTAGTCCTTGGGC+CGG - Chr5:12198312-12198331 None:intergenic 50.0%
!! TTACAGGGGTCAGGGCATTT+TGG + Chr5:12198444-12198463 MsG0580024960.01.T01:three_prime_UTR 50.0%
!! TTTCGGTTGGTTCTGGAGCT+CGG + Chr5:12194707-12194726 MsG0580024960.01.T01:CDS 50.0%
ACCTGCGGCTCAACAGATCA+AGG - Chr5:12197388-12197407 None:intergenic 55.0%
AGACGTTTCAGCAGAGCCTC+TGG - Chr5:12196720-12196739 None:intergenic 55.0%
AGTGCTGCATTCTCGTCGGT+TGG - Chr5:12194151-12194170 None:intergenic 55.0%
CAATCCCATCGTCCACTAGC+GGG + Chr5:12198339-12198358 MsG0580024960.01.T01:three_prime_UTR 55.0%
CCACCAACCAGCAAGTACCA+TGG - Chr5:12198243-12198262 None:intergenic 55.0%
GATGCAGCCGCTATGTGAGA+CGG + Chr5:12196121-12196140 MsG0580024960.01.T01:intron 55.0%
GCGACAGAGCGAAAACCTTC+AGG + Chr5:12197709-12197728 MsG0580024960.01.T01:CDS 55.0%
GTATAGGGCTCCCCCTGATT+AGG - Chr5:12192694-12192713 None:intergenic 55.0%
GTCGTATCTGGTACGACTGG+TGG - Chr5:12192597-12192616 None:intergenic 55.0%
GTGTATGCACCACCTTGAGG+GGG + Chr5:12193381-12193400 MsG0580024960.01.T01:intron 55.0%
TCCTTGATCTGTTGAGCCGC+AGG + Chr5:12197384-12197403 MsG0580024960.01.T01:CDS 55.0%
TGATCTGTTGAGCCGCAGGT+GGG + Chr5:12197388-12197407 MsG0580024960.01.T01:CDS 55.0%
TTGATCTGTTGAGCCGCAGG+TGG + Chr5:12197387-12197406 MsG0580024960.01.T01:CDS 55.0%
! CCATGGTACTTGCTGGTTGG+TGG + Chr5:12198240-12198259 MsG0580024960.01.T01:three_prime_UTR 55.0%
! GCTGCAACGTGTCACTGACA+GGG + Chr5:12197873-12197892 MsG0580024960.01.T01:intron 55.0%
! TCTTCCCGCTAGTGGACGAT+GGG - Chr5:12198346-12198365 None:intergenic 55.0%
! TGCCCATGGTACTTGCTGGT+TGG + Chr5:12198237-12198256 MsG0580024960.01.T01:three_prime_UTR 55.0%
! TTCTTCCCGCTAGTGGACGA+TGG - Chr5:12198347-12198366 None:intergenic 55.0%
!! AGAGGCTGAGTATCGAGCCA+TGG + Chr5:12193056-12193075 MsG0580024960.01.T01:CDS 55.0%
!! AGGGGTCAGGGCATTTTGGA+AGG + Chr5:12198448-12198467 MsG0580024960.01.T01:three_prime_UTR 55.0%
!! GGGGTCAGGGCATTTTGGAA+GGG + Chr5:12198449-12198468 MsG0580024960.01.T01:three_prime_UTR 55.0%
!! TTCGGTTGGTTCTGGAGCTC+GGG + Chr5:12194708-12194727 MsG0580024960.01.T01:CDS 55.0%
ACTAGGTGGGGTCGGCTACA+TGG - Chr5:12195471-12195490 None:intergenic 60.0%
ATGTAGCCGACCCCACCTAG+TGG + Chr5:12195470-12195489 MsG0580024960.01.T01:intron 60.0%
CTCAACACTCCCCCTCAAGG+TGG - Chr5:12193393-12193412 None:intergenic 60.0%
GGGGAGCCCTATACTGATCC+AGG + Chr5:12192700-12192719 MsG0580024960.01.T01:CDS 60.0%
TGGGAGCTATGAGGAGGCTG+TGG + Chr5:12193955-12193974 MsG0580024960.01.T01:CDS 60.0%
TGTAGCCGACCCCACCTAGT+GGG + Chr5:12195471-12195490 MsG0580024960.01.T01:intron 60.0%
! GGCTGCAACGTGTCACTGAC+AGG + Chr5:12197872-12197891 MsG0580024960.01.T01:intron 60.0%
! TGCGGAGATTGAGGGTGCAG+AGG + Chr5:12197265-12197284 MsG0580024960.01.T01:CDS 60.0%
!! TGCACGAGAGTGCTCCCGTT+GGG - Chr5:12198089-12198108 None:intergenic 60.0%
!! TGGTTCTGGAGCTCGGGAGA+TGG + Chr5:12194714-12194733 MsG0580024960.01.T01:CDS 60.0%
!! GCACGAGAGTGCTCCCGTTG+GGG - Chr5:12198088-12198107 None:intergenic 65.0%
!! GTGCACGAGAGTGCTCCCGT+TGG - Chr5:12198090-12198109 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr5 gene 12192565 12198621 12192565 ID=MsG0580024960.01;Name=MsG0580024960.01
Chr5 mRNA 12192565 12198621 12192565 ID=MsG0580024960.01.T01;Parent=MsG0580024960.01;Name=MsG0580024960.01.T01;_AED=0.34;_eAED=0.34;_QI=0|0.85|0.87|1|1|1|8|443|919
Chr5 exon 12192565 12193382 12192565 ID=MsG0580024960.01.T01:exon:3202;Parent=MsG0580024960.01.T01
Chr5 exon 12193931 12194339 12193931 ID=MsG0580024960.01.T01:exon:3203;Parent=MsG0580024960.01.T01
Chr5 exon 12194694 12195017 12194694 ID=MsG0580024960.01.T01:exon:3204;Parent=MsG0580024960.01.T01
Chr5 exon 12196128 12196349 12196128 ID=MsG0580024960.01.T01:exon:3205;Parent=MsG0580024960.01.T01
Chr5 exon 12196585 12196827 12196585 ID=MsG0580024960.01.T01:exon:3206;Parent=MsG0580024960.01.T01
Chr5 exon 12197023 12197466 12197023 ID=MsG0580024960.01.T01:exon:3207;Parent=MsG0580024960.01.T01
Chr5 exon 12197632 12197730 12197632 ID=MsG0580024960.01.T01:exon:3208;Parent=MsG0580024960.01.T01
Chr5 exon 12197978 12198621 12197978 ID=MsG0580024960.01.T01:exon:3209;Parent=MsG0580024960.01.T01
Chr5 CDS 12192565 12193382 12192565 ID=MsG0580024960.01.T01:cds;Parent=MsG0580024960.01.T01
Chr5 CDS 12193931 12194339 12193931 ID=MsG0580024960.01.T01:cds;Parent=MsG0580024960.01.T01
Chr5 CDS 12194694 12195017 12194694 ID=MsG0580024960.01.T01:cds;Parent=MsG0580024960.01.T01
Chr5 CDS 12196128 12196349 12196128 ID=MsG0580024960.01.T01:cds;Parent=MsG0580024960.01.T01
Chr5 CDS 12196585 12196827 12196585 ID=MsG0580024960.01.T01:cds;Parent=MsG0580024960.01.T01
Chr5 CDS 12197023 12197466 12197023 ID=MsG0580024960.01.T01:cds;Parent=MsG0580024960.01.T01
Chr5 CDS 12197632 12197730 12197632 ID=MsG0580024960.01.T01:cds;Parent=MsG0580024960.01.T01
Chr5 CDS 12197978 12198178 12197978 ID=MsG0580024960.01.T01:cds;Parent=MsG0580024960.01.T01
Chr5 three_prime_UTR 12198179 12198621 12198179 ID=MsG0580024960.01.T01:three_prime_utr;Parent=MsG0580024960.01.T01
Gene Sequence

>MsG0580024960.01.T01

ATGTTGAGTCCACTCATATATCTTCTGTCCCACCAGTCGTACCAGATACGACATATTTTGGAGGAGACAGGTCTTACGGACTGCAAACCAGTTGAGACTCCTATGGATCCTAATGTGAAGCTTCTTCCTAATCAGGGGGAGCCCTATACTGATCCAGGCAAATACCGAAGACTTGTCGGAAAGTTAGATTATCTCACCATGACTCGGCCTGACATATCTTTTCCAGTTAGTGTAGTAAGTCAGTTCCTCAACTCTCCTTGTGACAACCATTGGAATGCAGTTATTCAAATTCTTAAGTACGTTAAAGGATCACCTGGTAAGGGGCTTGTCTTTACTGATAGAGGCAACACCGAAATCATTGGATATTCAGATGCTGATTGGGCAGGAGATGCAAGTGATAGACGGTCTACGTCTGGTTATTGTGTTTTCTTTGGTGGAAATTTAATTTCATGGAAGAGCAAAAAGCAAAACGTTGTTGCTCGATCAAGTACAGAGGCTGAGTATCGAGCCATGGCTCATGCCACATGTGAACTTTTATGGTTGAAGCATTTACTTCAGGAACTTCATTTTTGTGAGATTGGTCCAATGGAACTTGTGTGTGATAACCAATCAGCGTTGCACCTCTCATCCAATCCAGTTTTTCACGAGAGGACAAAGCATATTGAAGTTGACTGTCACTTTCTTAGAGAGAAGATTATCACCGGAATCATCAGAACCTCCTTTGTCAATTCCAAGGATCAACTCGCTGATATCTTTACTAAATCTCTACGAGGTCCTCGGATAACTTACATATGTGACAAGATGGATGCATATGATGTATATGCCCACTATCTTTTTGAAAATGGGAGCTATGAGGAGGCTGTGGAACATTTTCTAGAATCTCAAGTAGATATAACCTATGTGCTTTCTCTTTATCCATCCATTATCCTTCCAAAGACAACTATTGTTCATGAGCCAGAGAAGTTGGACATTGATGGGGATGATTCCTATCTTTCCAGAGTTTCGTCAGGTGTTTCAGATGATATGGAACCCTTACCAACCGACGAGAATGCAGCACTTGAATCCAAAAAAACGAATCATAATATGCTTATGGCTCTCATAAAATATTTGCAGAAGAAGAGAGGTAATTTTATTGAGAAGGCTACTGCGGAGGGAACTGAAGAAGTTGTTTTAGATGCAGTTGGCGATAACTATGCATCCTACAATAGGTTTAAAAAAGTAAACAAGGGGCGTGGTAATATTTCGGTTGGTTCTGGAGCTCGGGAGATGGCTTCAATATTAGACACTGCTCTACTCCAAGCATTGCTTCTTACTGGACAATCTTCAGCAGCTTTAGAAATACTAAGAGGTGTTAATTACTGCGATATGAAAATATGTGAAGAAATACTTCGAAAAGGCAATCTTAATGCTGCTTTATTAGAACTTTACAAGTGCAAGTCATTGCACCGGCAAGCTCTTGAACTTCTTCACAAGTTGGTGGAAGAGTCAAGATCTAGCCAGTCTGAAATTACACAAAGGTTCAAGCCTGAGGACATTGTTGAGTATCTCAAGCCGCTATGTGAGACGGATCCCATACTTGTTCTGGAATTCTCAATGCTTGTTCTTGAAAGCTGTCCATCCCAAACTATTGAGCTTTTTCTGTCTGGAAATATACCAGCTGATATGGTGAACTCATATTTGAAGCAGCACTCTCCAAACATGCAAGCTAAGTACTTGGAGCTCATGCTTGCAATGAATGAGAATGCCATATCTGGCAATCTGCAAAATGAAATGGTAAACATCTACCTATCTGACGTACTTGATTGGCATGCCGACTTAAATGCTCAACAAAATTGGGATGAGAAAACTTATACCCCAACTAGGAAAAAATTATTGTCGGCTTTAGAAGGCATATCGGGATACAATCCAGAGGCTCTGCTGAAACGTCTTCCTCAAGATGCTTTATATGAAGAGCGTGCAATATTGTTGGGAAAAATGAACCAACATGAACTGGCATTGTCTCTGTATGTTCATAAGCTTCATGTTCCAGAATTGGCATTATCATATTGTGATCGGGTGTACGAGTCCATGCATCAGCCATCTCTAAAAAAATCTAGCAACATATACCTATTGCTTATGCAAATCTATTTGAATCCTCGAAAGACCACAGCAAGCTTTGAAATGAGAATTACAAATCTATTATCCCCACAAAATACAGCCATTTCTAGAGGTAGTGCACCATCTGTAAAAAGTAAAGGGGGCCGAGGATCAAAGAAAATTGCGGAGATTGAGGGTGCAGAGGACACAAAAGTTAGTTTGAGCAGCACCGACAGTAGCAAGAGTGATGGTGATGCGGATGAATTTAATGAGGGTGACTCTACTATCATGCTTGATGAGGTCCTTGATCTGTTGAGCCGCAGGTGGGATAGAATAAATGGAGCTCAGGCCCTTAAACTTTTACCGAGGGAGACTAAGTTACAGGATTTGCAATCATTTCTTGGGCCTCTTTTGAGAAAATCTAGTGAAATGTACCGTAACTGTTCAGTGATCAAGAGCTTGCGACAGAGCGAAAACCTTCAGGTGAAAGATGAACTGTATAGTCAGAGGAAAGCAGTTGTGAAGGTAACCAGCGATAGCATGTGTTCTCTGTGCCGAAAGAAAATAGGGACTAGTGTTTTTGCTGTCTACCCCAACGGGAGCACTCTCGTGCACTTTGTCTGTTTTAAAGATTCTCAAAAAATGAAAGCAGTGACCAAAGGGTCTCAGTTGAGGAAGCGATGA

Protein sequence

>MsG0580024960.01.T01

MLSPLIYLLSHQSYQIRHILEETGLTDCKPVETPMDPNVKLLPNQGEPYTDPGKYRRLVGKLDYLTMTRPDISFPVSVVSQFLNSPCDNHWNAVIQILKYVKGSPGKGLVFTDRGNTEIIGYSDADWAGDASDRRSTSGYCVFFGGNLISWKSKKQNVVARSSTEAEYRAMAHATCELLWLKHLLQELHFCEIGPMELVCDNQSALHLSSNPVFHERTKHIEVDCHFLREKIITGIIRTSFVNSKDQLADIFTKSLRGPRITYICDKMDAYDVYAHYLFENGSYEEAVEHFLESQVDITYVLSLYPSIILPKTTIVHEPEKLDIDGDDSYLSRVSSGVSDDMEPLPTDENAALESKKTNHNMLMALIKYLQKKRGNFIEKATAEGTEEVVLDAVGDNYASYNRFKKVNKGRGNISVGSGAREMASILDTALLQALLLTGQSSAALEILRGVNYCDMKICEEILRKGNLNAALLELYKCKSLHRQALELLHKLVEESRSSQSEITQRFKPEDIVEYLKPLCETDPILVLEFSMLVLESCPSQTIELFLSGNIPADMVNSYLKQHSPNMQAKYLELMLAMNENAISGNLQNEMVNIYLSDVLDWHADLNAQQNWDEKTYTPTRKKLLSALEGISGYNPEALLKRLPQDALYEERAILLGKMNQHELALSLYVHKLHVPELALSYCDRVYESMHQPSLKKSSNIYLLLMQIYLNPRKTTASFEMRITNLLSPQNTAISRGSAPSVKSKGGRGSKKIAEIEGAEDTKVSLSSTDSSKSDGDADEFNEGDSTIMLDEVLDLLSRRWDRINGAQALKLLPRETKLQDLQSFLGPLLRKSSEMYRNCSVIKSLRQSENLQVKDELYSQRKAVVKVTSDSMCSLCRKKIGTSVFAVYPNGSTLVHFVCFKDSQKMKAVTKGSQLRKR*