AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880047144.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047144.01.T01 MTR_0048s0090 52.299 174 83 0 118 291 393 566 3.09e-62 210
MsG0880047144.01.T01 MTR_8g085330 68.116 138 27 1 267 404 152 272 1.54e-57 189
MsG0880047144.01.T01 MTR_4g062370 72.464 138 22 1 267 404 607 728 6.77e-57 199
MsG0880047144.01.T01 MTR_3g085980 70.290 138 22 2 268 404 75 194 1.87e-56 184
MsG0880047144.01.T01 MTR_4g134740 73.729 118 31 0 287 404 1 118 3.49e-56 181
MsG0880047144.01.T01 MTR_5g087830 67.391 138 30 1 267 404 134 256 5.35e-56 185
MsG0880047144.01.T01 MTR_3g109050 58.696 138 57 0 267 404 85 222 2.65e-52 174
MsG0880047144.01.T01 MTR_7g113060 75.000 104 26 0 267 370 87 190 8.77e-52 172
MsG0880047144.01.T01 MTR_4g010800 75.229 109 27 0 267 375 56 164 1.57e-51 170
MsG0880047144.01.T01 MTR_4g076760 63.359 131 46 1 242 370 396 526 1.51e-50 178
MsG0880047144.01.T01 MTR_3g100990 59.420 138 56 0 267 404 368 505 2.04e-49 174
MsG0880047144.01.T01 MTR_0296s0010 80.612 98 19 0 267 364 235 332 2.09e-49 170
MsG0880047144.01.T01 MTR_5g064790 61.871 139 35 2 267 404 3 124 2.61e-49 163
MsG0880047144.01.T01 MTR_8g057880 66.667 135 30 1 267 401 84 203 5.00e-49 167
MsG0880047144.01.T01 MTR_7g018160 58.519 135 56 0 267 401 158 292 6.15e-48 165
MsG0880047144.01.T01 MTR_7g046285 72.897 107 29 0 298 404 39 145 2.46e-47 159
MsG0880047144.01.T01 MTR_5g071700 60.145 138 33 1 267 404 309 424 2.60e-46 164
MsG0880047144.01.T01 MTR_2g058900 73.684 95 25 0 281 375 35 129 7.50e-46 154
MsG0880047144.01.T01 MTR_2g016390 62.069 145 36 1 259 403 389 514 1.22e-45 167
MsG0880047144.01.T01 MTR_6g069780 70.642 109 15 1 296 404 3 94 3.20e-45 151
MsG0880047144.01.T01 MTR_5g032840 59.420 138 28 1 267 404 308 417 1.08e-43 157
MsG0880047144.01.T01 MTR_3g048960 64.341 129 31 1 276 404 4 117 3.34e-43 152
MsG0880047144.01.T01 MTR_3g048960 78.049 41 9 0 328 368 215 255 2.06e-13 70.1
MsG0880047144.01.T01 MTR_8g057780 56.522 138 38 1 267 404 6 121 1.21e-42 145
MsG0880047144.01.T01 MTR_4g115110 71.429 98 28 0 267 364 61 158 2.23e-42 146
MsG0880047144.01.T01 MTR_3g462200 83.117 77 13 0 267 343 3 79 1.27e-41 142
MsG0880047144.01.T01 MTR_1g092930 51.095 137 67 0 259 395 238 374 4.33e-41 149
MsG0880047144.01.T01 MTR_4g078000 68.571 105 32 1 267 371 58 161 8.67e-41 145
MsG0880047144.01.T01 MTR_7g110460 57.037 135 30 1 265 399 59 165 6.81e-40 141
MsG0880047144.01.T01 MTR_1g101230 62.791 129 33 1 276 404 64 177 7.73e-40 140
MsG0880047144.01.T01 MTR_1g093010 49.635 137 69 0 259 395 216 352 1.09e-39 145
MsG0880047144.01.T01 MTR_1g057360 82.051 78 14 0 267 344 278 355 2.93e-39 144
MsG0880047144.01.T01 MTR_0014s0220 62.037 108 41 0 267 374 511 618 3.41e-39 149
MsG0880047144.01.T01 MTR_1g107470 56.140 114 50 0 259 372 259 372 3.99e-39 144
MsG0880047144.01.T01 MTR_3g074460 80.519 77 15 0 267 343 83 159 6.58e-39 137
MsG0880047144.01.T01 MTR_0073s0030 58.491 106 44 0 267 372 101 206 1.78e-38 137
MsG0880047144.01.T01 MTR_4g009520 50.725 138 47 1 267 404 85 201 1.87e-38 137
MsG0880047144.01.T01 MTR_1g047970 60.550 109 43 0 267 375 119 227 3.02e-38 147
MsG0880047144.01.T01 MTR_7g108380 72.340 94 10 1 308 401 1 78 3.04e-38 132
MsG0880047144.01.T01 MTR_6g012610 58.000 100 42 0 267 366 3 102 3.35e-38 133
MsG0880047144.01.T01 MTR_8g072100 54.348 138 31 1 267 404 84 189 3.41e-38 136
MsG0880047144.01.T01 MTR_8g075630 58.491 106 44 0 267 372 101 206 1.04e-37 135
MsG0880047144.01.T01 MTR_3g085530 56.849 146 35 1 259 404 665 782 1.10e-37 145
MsG0880047144.01.T01 MTR_5g061500 48.630 146 59 1 259 404 365 494 1.75e-37 142
MsG0880047144.01.T01 MTR_1g018670 71.134 97 24 2 307 403 6 98 2.71e-37 134
MsG0880047144.01.T01 MTR_3g107750 58.654 104 35 1 85 188 24 119 2.88e-37 134
MsG0880047144.01.T01 MTR_1g086460 49.045 157 44 3 248 404 33 153 5.28e-37 132
MsG0880047144.01.T01 MTR_0134s0020 49.630 135 49 1 267 401 233 348 1.05e-36 137
MsG0880047144.01.T01 MTR_8g015280 78.947 76 16 0 267 342 68 143 1.41e-36 130
MsG0880047144.01.T01 MTR_7g070715 57.971 138 30 1 267 404 268 377 3.17e-36 136
MsG0880047144.01.T01 MTR_1g092990 48.837 129 66 0 267 395 247 375 4.51e-36 136
MsG0880047144.01.T01 MTR_4g037490 53.211 109 51 0 267 375 3 111 6.29e-36 128
MsG0880047144.01.T01 MTR_5g020370 67.708 96 31 0 267 362 257 352 6.44e-36 135
MsG0880047144.01.T01 MTR_4g101340 58.407 113 19 1 267 379 3 87 7.52e-36 127
MsG0880047144.01.T01 MTR_8g447120 40.237 169 75 2 129 297 28 170 1.38e-35 131
MsG0880047144.01.T01 MTR_3g081620 80.822 73 14 0 287 359 1 73 2.23e-35 125
MsG0880047144.01.T01 MTR_0025s0050 62.366 93 35 0 281 373 107 199 2.34e-35 129
MsG0880047144.01.T01 MTR_3g072880 55.645 124 34 2 267 389 3 106 4.34e-35 127
MsG0880047144.01.T01 MTR_4g096800 48.148 135 52 1 267 401 156 272 5.06e-35 131
MsG0880047144.01.T01 MTR_5g032940 47.482 139 52 1 259 397 226 343 1.92e-34 130
MsG0880047144.01.T01 MTR_8g022960 50.000 138 32 1 267 404 166 266 3.05e-34 128
MsG0880047144.01.T01 MTR_0032s0020 59.375 96 39 0 267 362 491 586 2.66e-33 131
MsG0880047144.01.T01 MTR_3g112030 55.085 118 24 1 287 404 1 89 6.35e-33 119
MsG0880047144.01.T01 MTR_7g022020 50.000 138 35 2 267 404 502 605 7.44e-33 130
MsG0880047144.01.T01 MTR_3g030470 52.174 138 29 2 267 404 116 216 9.68e-33 123
MsG0880047144.01.T01 MTR_3g034020 44.755 143 65 1 260 402 307 435 1.27e-32 128
MsG0880047144.01.T01 MTR_5g009440 47.101 138 48 1 267 404 59 171 1.57e-32 120
MsG0880047144.01.T01 MTR_1g102100 58.182 110 21 1 274 383 20 104 1.94e-32 118
MsG0880047144.01.T01 MTR_0550s0010 57.292 96 41 0 267 362 186 281 2.32e-32 124
MsG0880047144.01.T01 MTR_2g013330 58.163 98 41 0 267 364 351 448 3.78e-32 128
MsG0880047144.01.T01 MTR_6g029550 47.183 142 57 1 263 404 273 396 8.16e-32 125
MsG0880047144.01.T01 MTR_1g093700 43.478 138 61 1 267 404 197 317 1.25e-31 122
MsG0880047144.01.T01 MTR_4g039550 40.132 152 66 1 253 404 58 184 1.37e-31 119
MsG0880047144.01.T01 MTR_6g071545 76.812 69 16 0 273 341 216 284 4.66e-31 121
MsG0880047144.01.T01 MTR_5g077490 39.000 200 67 6 206 404 3 148 6.80e-31 115
MsG0880047144.01.T01 MTR_1g106700 42.466 146 60 1 259 404 113 234 1.28e-30 117
MsG0880047144.01.T01 MTR_2g064230 45.139 144 58 1 259 402 304 426 7.82e-30 121
MsG0880047144.01.T01 MTR_8g019090 46.479 142 46 3 265 404 114 227 2.13e-29 114
MsG0880047144.01.T01 MTR_1g081340 43.357 143 63 1 259 401 282 406 3.90e-29 117
MsG0880047144.01.T01 MTR_7g006890 80.328 61 12 0 267 327 166 226 5.81e-29 113
MsG0880047144.01.T01 MTR_7g006890 76.744 43 10 0 351 393 28 70 2.89e-14 72.0
MsG0880047144.01.T01 MTR_7g117680 78.689 61 13 0 267 327 60 120 6.71e-29 109
MsG0880047144.01.T01 MTR_7g104240 53.211 109 34 1 267 375 215 306 1.01e-28 114
MsG0880047144.01.T01 MTR_2g058680 48.696 115 43 2 267 381 112 210 1.17e-28 112
MsG0880047144.01.T01 MTR_1g092940 50.943 106 33 2 267 370 31 119 2.22e-28 108
MsG0880047144.01.T01 MTR_4g104400 37.222 180 91 5 1 171 1 167 4.41e-28 108
MsG0880047144.01.T01 MTR_1g116150 51.351 111 37 1 265 375 258 351 7.92e-28 113
MsG0880047144.01.T01 MTR_8g061330 53.211 109 34 1 267 375 345 436 1.16e-27 114
MsG0880047144.01.T01 MTR_2g062630 60.825 97 10 2 308 404 133 201 1.18e-27 108
MsG0880047144.01.T01 MTR_0003s0250 48.936 94 48 0 267 360 111 204 1.57e-27 108
MsG0880047144.01.T01 MTR_4g132830 51.376 109 36 1 267 375 246 337 2.76e-27 111
MsG0880047144.01.T01 MTR_5g071480 51.376 109 36 1 267 375 189 280 3.48e-27 109
MsG0880047144.01.T01 MTR_6g073050 48.333 120 31 1 281 400 8 96 3.51e-27 104
MsG0880047144.01.T01 MTR_0022s0370 56.790 81 35 0 267 347 85 165 3.85e-27 106
MsG0880047144.01.T01 MTR_3g101850 43.151 146 42 2 259 404 120 224 7.04e-27 107
MsG0880047144.01.T01 MTR_5g059380 50.450 111 38 1 265 375 289 382 8.74e-27 110
MsG0880047144.01.T01 MTR_3g031910 58.333 84 35 0 267 350 238 321 2.54e-26 108
MsG0880047144.01.T01 MTR_6g018340 72.059 68 19 0 337 404 1 68 2.69e-26 100
MsG0880047144.01.T01 MTR_0003s0410 49.495 99 49 1 267 364 427 525 2.71e-26 111
MsG0880047144.01.T01 MTR_7g052070 50.000 102 44 1 267 368 133 227 7.26e-26 104
MsG0880047144.01.T01 MTR_8g039750 40.580 138 54 2 267 404 3 112 7.96e-26 102
MsG0880047144.01.T01 MTR_2g008505 45.890 146 31 1 259 404 254 351 9.09e-26 107
MsG0880047144.01.T01 MTR_3g032450 56.044 91 26 1 311 401 1 77 1.75e-25 99.0
MsG0880047144.01.T01 MTR_5g024850 50.459 109 37 1 267 375 279 370 1.83e-25 106
MsG0880047144.01.T01 MTR_8g039580 40.580 138 49 1 267 404 59 163 4.63e-25 100
MsG0880047144.01.T01 MTR_2g038740 60.759 79 31 0 190 268 259 337 5.64e-25 107
MsG0880047144.01.T01 MTR_1g012040 41.176 136 52 1 267 402 373 480 6.71e-25 107
MsG0880047144.01.T01 MTR_2g065670 58.763 97 22 3 305 399 255 335 1.11e-24 107
MsG0880047144.01.T01 MTR_1g098810 39.831 118 54 1 267 384 31 131 1.35e-24 98.6
MsG0880047144.01.T01 MTR_6g027930 70.769 65 19 0 337 401 1 65 1.74e-24 97.1
MsG0880047144.01.T01 MTR_6g086110 58.889 90 20 2 301 389 32 105 3.19e-24 96.7
MsG0880047144.01.T01 MTR_7g498270 70.000 70 12 2 305 374 48 108 4.20e-24 96.3
MsG0880047144.01.T01 MTR_7g027013 79.661 59 12 0 267 325 612 670 2.59e-23 102
MsG0880047144.01.T01 MTR_8g023250 37.681 138 56 2 267 404 206 313 1.12e-22 97.8
MsG0880047144.01.T01 MTR_7g060880 59.406 101 17 2 328 404 17 117 1.14e-22 94.0
MsG0880047144.01.T01 MTR_3g023450 42.017 119 57 4 291 401 1 115 1.24e-22 92.8
MsG0880047144.01.T01 MTR_8g039210 36.129 155 69 4 113 264 269 396 1.75e-22 100
MsG0880047144.01.T01 MTR_7g050355 63.768 69 25 0 259 327 551 619 1.93e-22 100
MsG0880047144.01.T01 MTR_0017s0290 74.194 62 16 0 343 404 354 415 3.86e-22 97.8
MsG0880047144.01.T01 MTR_8g470080 73.684 57 15 0 286 342 146 202 5.38e-22 93.6
MsG0880047144.01.T01 MTR_3g452260 72.881 59 16 0 346 404 41 99 5.43e-22 90.1
MsG0880047144.01.T01 MTR_3g451160 72.881 59 16 0 346 404 41 99 5.43e-22 90.1
MsG0880047144.01.T01 MTR_2g036820 33.333 165 78 2 97 261 92 224 6.19e-22 94.4
MsG0880047144.01.T01 MTR_3g045160 67.797 59 19 0 267 325 58 116 6.90e-22 90.5
MsG0880047144.01.T01 MTR_6g044370 39.865 148 47 3 258 404 198 304 1.33e-21 94.7
MsG0880047144.01.T01 MTR_0007s0160 66.154 65 22 0 337 401 1 65 2.21e-21 88.2
MsG0880047144.01.T01 MTR_5g464580 62.121 66 25 0 336 401 28 93 2.68e-21 88.2
MsG0880047144.01.T01 MTR_2g064240 30.811 185 98 2 222 404 105 261 6.48e-21 92.0
MsG0880047144.01.T01 MTR_3g065720 58.108 74 17 1 311 384 5 64 6.75e-21 85.9
MsG0880047144.01.T01 MTR_0003s0430 34.146 164 88 6 125 284 201 348 1.63e-20 93.2
MsG0880047144.01.T01 MTR_1g033190 42.857 91 51 1 255 344 30 120 1.65e-20 86.7
MsG0880047144.01.T01 MTR_8g056990 51.163 86 23 1 287 372 1 67 3.40e-20 84.3
MsG0880047144.01.T01 MTR_5g034510 52.381 84 24 1 321 404 24 91 8.10e-20 84.0
MsG0880047144.01.T01 MTR_8g039470 80.851 47 9 0 358 404 48 94 8.31e-20 84.0
MsG0880047144.01.T01 MTR_8g042100 51.579 95 24 2 288 382 24 96 8.52e-20 84.0
MsG0880047144.01.T01 MTR_0077s0060 40.179 112 65 2 150 260 6 116 8.89e-20 89.7
MsG0880047144.01.T01 MTR_2g054670 67.241 58 19 0 347 404 88 145 8.98e-20 85.5
MsG0880047144.01.T01 MTR_4g009693 67.241 58 19 0 347 404 42 99 1.88e-19 83.2
MsG0880047144.01.T01 MTR_0786s0010 66.102 59 19 1 346 404 1 58 2.23e-19 81.6
MsG0880047144.01.T01 MTR_7g490340 43.011 93 52 1 267 358 35 127 2.46e-19 84.0
MsG0880047144.01.T01 MTR_5g099270 46.465 99 39 2 306 404 2 86 3.18e-19 82.0
MsG0880047144.01.T01 MTR_1g098830 66.667 72 17 4 331 397 8 77 3.44e-19 81.6
MsG0880047144.01.T01 MTR_3g035990 39.098 133 31 2 268 400 16 98 4.77e-19 83.6
MsG0880047144.01.T01 MTR_0390s0030 64.516 62 21 1 343 404 39 99 5.94e-19 81.6
MsG0880047144.01.T01 MTR_5g020340 49.367 79 39 1 267 344 285 363 1.11e-18 87.0
MsG0880047144.01.T01 MTR_6g008980 36.719 128 56 2 276 401 1 105 1.12e-18 82.4
MsG0880047144.01.T01 MTR_6g086070 36.496 137 59 2 267 401 35 145 3.32e-18 81.3
MsG0880047144.01.T01 MTR_8g016050 61.194 67 23 1 337 403 1 64 4.98e-18 78.6
MsG0880047144.01.T01 MTR_4g034880 37.705 122 39 1 282 403 287 371 6.03e-18 85.5
MsG0880047144.01.T01 MTR_3g082460 86.957 46 6 0 359 404 257 302 1.33e-17 83.2
MsG0880047144.01.T01 MTR_3g010480 69.643 56 17 0 349 404 6 61 1.54e-17 76.6
MsG0880047144.01.T01 MTR_3g101720 84.615 39 6 0 330 368 21 59 1.66e-17 76.6
MsG0880047144.01.T01 MTR_1g045920 41.525 118 23 1 287 404 201 272 8.00e-17 80.5
MsG0880047144.01.T01 MTR_7g108370 83.721 43 7 0 267 309 106 148 1.52e-16 77.4
MsG0880047144.01.T01 MTR_5g055930 42.202 109 23 1 296 404 29 97 1.58e-16 75.1
MsG0880047144.01.T01 MTR_4g086180 41.237 97 40 1 267 363 353 432 2.00e-16 80.9
MsG0880047144.01.T01 MTR_3g056470 53.750 80 26 3 326 404 58 127 2.47e-16 75.5
MsG0880047144.01.T01 MTR_3g056470 48.148 54 28 0 206 259 3 56 1.35e-11 62.0
MsG0880047144.01.T01 MTR_6g013370 77.273 44 10 0 344 387 9 52 2.50e-16 73.2
MsG0880047144.01.T01 MTR_5g071420 45.918 98 51 2 259 356 119 214 2.78e-16 78.2
MsG0880047144.01.T01 MTR_3g047930 69.811 53 16 0 352 404 105 157 3.23e-16 75.9
MsG0880047144.01.T01 MTR_1g106780 52.632 76 27 1 326 401 58 124 3.42e-16 75.1
MsG0880047144.01.T01 MTR_1g106780 50.000 54 27 0 206 259 3 56 1.23e-12 65.1
MsG0880047144.01.T01 MTR_3g114250 53.623 69 30 1 335 401 19 87 3.79e-16 77.4
MsG0880047144.01.T01 MTR_4g030760 66.154 65 19 1 337 401 1 62 4.00e-16 80.1
MsG0880047144.01.T01 MTR_0196s0030 67.308 52 17 0 348 399 86 137 6.71e-16 78.2
MsG0880047144.01.T01 MTR_8g096220 67.347 49 16 0 356 404 87 135 1.62e-15 73.2
MsG0880047144.01.T01 MTR_5g080630 85.366 41 6 0 364 404 102 142 3.89e-15 72.4
MsG0880047144.01.T01 MTR_2g100050 62.963 54 20 0 351 404 79 132 5.00e-15 72.0
MsG0880047144.01.T01 MTR_5g098440 43.421 76 40 2 296 368 4 79 7.19e-15 69.7
MsG0880047144.01.T01 MTR_0118s0040 52.459 61 29 0 267 327 228 288 1.04e-14 74.3
MsG0880047144.01.T01 MTR_7g117425 54.237 59 27 0 285 343 130 188 1.13e-14 73.9
MsG0880047144.01.T01 MTR_2g058780 52.459 61 29 0 267 327 254 314 1.55e-14 74.3
MsG0880047144.01.T01 MTR_3g110165 41.667 84 32 1 291 374 1 67 1.56e-14 68.6
MsG0880047144.01.T01 MTR_3g052540 34.058 138 38 2 267 404 204 288 1.98e-14 73.6
MsG0880047144.01.T01 MTR_3g050180 67.442 43 14 0 362 404 24 66 2.70e-14 67.8
MsG0880047144.01.T01 MTR_8g056080 43.590 78 42 1 326 401 6 83 2.75e-14 68.6
MsG0880047144.01.T01 MTR_8g073690 60.377 53 19 1 352 404 20 70 3.21e-14 67.8
MsG0880047144.01.T01 MTR_5g071690 77.273 44 9 1 343 386 91 133 4.04e-14 69.7
MsG0880047144.01.T01 MTR_4g129060 50.725 69 33 1 302 370 117 184 4.51e-14 72.0
MsG0880047144.01.T01 MTR_2g047000 54.412 68 16 2 337 404 1 53 5.87e-14 66.2
MsG0880047144.01.T01 MTR_3g098220 36.585 82 51 1 267 347 53 134 1.36e-13 67.8
MsG0880047144.01.T01 MTR_2g060870 39.450 109 48 1 170 260 173 281 1.85e-13 72.0
MsG0880047144.01.T01 MTR_8g015900 78.947 38 8 0 347 384 27 64 2.15e-13 65.5
MsG0880047144.01.T01 MTR_8g036260 66.667 48 16 0 357 404 315 362 2.85e-13 70.9
MsG0880047144.01.T01 MTR_3g046370 44.262 61 34 0 267 327 3 63 2.91e-13 66.2
MsG0880047144.01.T01 MTR_1g037600 72.093 43 12 0 267 309 192 234 3.13e-13 69.7
MsG0880047144.01.T01 MTR_1g094770 51.471 68 19 1 337 404 1 54 5.61e-13 63.5
MsG0880047144.01.T01 MTR_5g097630 30.435 161 62 3 230 383 69 186 7.21e-13 67.4
MsG0880047144.01.T01 MTR_2g103450 47.143 70 32 2 335 401 6 73 7.32e-13 63.9
MsG0880047144.01.T01 MTR_3g105960 63.462 52 19 0 276 327 42 93 8.52e-13 64.3
MsG0880047144.01.T01 MTR_8g466670 68.182 44 14 0 356 399 125 168 9.74e-13 66.6
MsG0880047144.01.T01 MTR_2g097380 51.429 70 20 1 327 396 44 99 1.34e-12 69.7
MsG0880047144.01.T01 MTR_4g014550 61.364 44 17 0 361 404 35 78 1.45e-12 63.5
MsG0880047144.01.T01 MTR_4g121520 82.500 40 7 0 358 397 158 197 4.91e-12 67.8
MsG0880047144.01.T01 MTR_7g117685 84.375 32 5 0 351 382 56 87 1.51e-11 60.8
MsG0880047144.01.T01 MTR_2g435910 80.000 35 6 1 328 361 27 61 1.61e-11 60.1
MsG0880047144.01.T01 MTR_4g127010 80.000 35 6 1 328 361 29 63 1.70e-11 60.1
MsG0880047144.01.T01 MTR_1g050372 33.000 100 56 2 66 164 17 106 1.78e-11 61.2
MsG0880047144.01.T01 MTR_3g114680 65.854 41 14 0 364 404 102 142 3.14e-11 61.2
MsG0880047144.01.T01 MTR_3g101860 64.444 45 16 0 352 396 22 66 3.46e-11 59.7
MsG0880047144.01.T01 MTR_8g026710 70.270 37 11 0 342 378 13 49 4.17e-11 58.5
MsG0880047144.01.T01 MTR_4g036215 35.398 113 46 3 291 401 195 282 4.73e-11 63.5
MsG0880047144.01.T01 MTR_0152s0060 44.048 84 28 2 273 356 329 393 4.82e-11 64.3
MsG0880047144.01.T01 MTR_5g074170 80.000 35 7 0 353 387 215 249 5.09e-11 63.2
MsG0880047144.01.T01 MTR_0003s0280 43.396 53 30 0 119 171 96 148 5.63e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047144.01.T01 AT3G51690 40.556 180 98 3 233 404 153 331 1.45e-40 147
MsG0880047144.01.T01 AT5G28780 49.286 140 69 1 265 404 193 330 1.01e-38 142
MsG0880047144.01.T01 AT3G51700 47.222 144 75 1 259 401 189 332 8.37e-38 140

Find 92 sgRNAs with CRISPR-Local

Find 140 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTGTCGGCGGAACGTCTTC+TGG 0.188287 8:+82621317 None:intergenic
TTGGAAGGAAGGGTGATTTC+AGG 0.210795 8:-82620013 MsG0880047144.01.T01:CDS
CCATCAACGCATAAAGAAAA+TGG 0.262838 8:-82621446 MsG0880047144.01.T01:CDS
CGGAAATGGAATCCGCTAAA+AGG 0.285567 8:-82621602 None:intergenic
ATACTCATAACTGACGAAAA+TGG 0.287218 8:-82619752 MsG0880047144.01.T01:CDS
TGGAGACTGCTACATATAAT+TGG 0.311993 8:+82619801 None:intergenic
ATTCAGAATATTTCGATGTT+GGG 0.346326 8:-82620696 MsG0880047144.01.T01:intron
GTCCTGGAAAATATAGTCTA+AGG 0.366485 8:-82621385 MsG0880047144.01.T01:CDS
TTAGGTTGATCCCCTGGTTT+AGG 0.370037 8:+82620337 None:intergenic
TAGGCAGCAAACTACCGATT+TGG 0.385555 8:+82620356 None:intergenic
ATTATCGTAAGTGTATTGAT+TGG 0.402274 8:+82621292 None:intergenic
TGATTTCAGGAAGCAACATT+GGG 0.404913 8:-82620000 MsG0880047144.01.T01:CDS
CTGTCGGCGGAACGTCTTCT+GGG 0.406931 8:+82621318 None:intergenic
AACCTACCATAATCATTGTC+AGG 0.417751 8:+82621008 None:intergenic
GGAACCGCGGTATGTTTGTA+AGG 0.421224 8:-82620674 MsG0880047144.01.T01:CDS
TATTCAGAATATTTCGATGT+TGG 0.427073 8:-82620697 MsG0880047144.01.T01:intron
ACGATTAATAATTACAAGAA+TGG 0.437482 8:-82620047 MsG0880047144.01.T01:CDS
ATTGCGAAACAAACAGTAAT+GGG 0.439084 8:+82619899 None:intergenic
GAAGATATGTATTGGAAGGA+AGG 0.449404 8:-82620024 MsG0880047144.01.T01:CDS
AAGAATGGGAAGATATGTAT+TGG 0.451099 8:-82620032 MsG0880047144.01.T01:CDS
ATATACAATTGTGCAAACTT+AGG 0.454014 8:+82620319 None:intergenic
ATGTTCGCCTTCACTTCAAT+TGG 0.455306 8:-82620451 MsG0880047144.01.T01:CDS
AATTATATGTAGCAGTCTCC+AGG 0.455772 8:-82619799 MsG0880047144.01.T01:CDS
CACAATTAAACCAATCATGC+GGG 0.458905 8:+82621057 None:intergenic
TGAAACACTATCGGATGAAT+CGG 0.468509 8:-82621099 MsG0880047144.01.T01:CDS
TTCCAGGACCAATTGGTTTG+AGG 0.475150 8:+82621399 None:intergenic
CTAAGGCATGTGGGAAATCA+AGG 0.478806 8:-82621368 MsG0880047144.01.T01:CDS
CATTAATGTGGTATGAAGAA+AGG 0.485072 8:-82620642 MsG0880047144.01.T01:CDS
CACAACCAATGTCGTATACA+AGG 0.487781 8:-82619714 MsG0880047144.01.T01:CDS
AAAGTAGGCCTCAAACCAAT+TGG 0.490108 8:-82621407 MsG0880047144.01.T01:CDS
GGCCTCAAACCAATTGGTCC+TGG 0.490254 8:-82621401 MsG0880047144.01.T01:CDS
GTGATTTCAGGAAGCAACAT+TGG 0.490638 8:-82620001 MsG0880047144.01.T01:CDS
CGATTAATAATTACAAGAAT+GGG 0.495134 8:-82620046 MsG0880047144.01.T01:CDS
GCAAACTTAGGTTGATCCCC+TGG 0.495421 8:+82620331 None:intergenic
CTATGTGCTGCATGCAAGGA+AGG 0.495549 8:-82620582 MsG0880047144.01.T01:CDS
GATGTTCCTGACAATGATTA+TGG 0.496451 8:-82621014 MsG0880047144.01.T01:intron
GGAGAAAATTACCACCAAAT+CGG 0.496564 8:-82620370 MsG0880047144.01.T01:CDS
ATGCAGCACATAGAAAATTC+TGG 0.501198 8:+82620592 None:intergenic
ATTAATGTGGTATGAAGAAA+GGG 0.507612 8:-82620641 MsG0880047144.01.T01:CDS
CTTTAAAGTACAACTCATGA+AGG 0.509587 8:+82620524 None:intergenic
AGGAAGCAACATTGGGGACA+AGG 0.510135 8:-82619993 MsG0880047144.01.T01:CDS
GGTCAATCATTAAAACAAGT+TGG 0.518278 8:-82619857 MsG0880047144.01.T01:CDS
GGTAGTTTGCTGCCTAAACC+AGG 0.519639 8:-82620349 MsG0880047144.01.T01:CDS
TTCAGAATATTTCGATGTTG+GGG 0.523920 8:-82620695 MsG0880047144.01.T01:intron
CAGTCTCCAGGGTGACATCA+AGG 0.525728 8:-82619787 MsG0880047144.01.T01:CDS
ACTTTACCGTTAGATAAAGT+AGG 0.526943 8:-82621422 MsG0880047144.01.T01:CDS
AGGAATTTAGACATAAATGC+TGG 0.527449 8:-82620085 MsG0880047144.01.T01:CDS
CATTGCGAAACAAACAGTAA+TGG 0.528541 8:+82619898 None:intergenic
CACCTCCTTGTATACGACAT+TGG 0.533079 8:+82619709 None:intergenic
CTGATAACGAAACTCACAAT+CGG 0.533605 8:-82620288 MsG0880047144.01.T01:CDS
TACAACTCATGAAGGGATTG+AGG 0.538566 8:+82620532 None:intergenic
AACGGAATTCTAGTGTCTGA+AGG 0.539563 8:+82619944 None:intergenic
ATAAATGCTGGCTTATGCAA+TGG 0.548777 8:-82620073 MsG0880047144.01.T01:CDS
CTTTGCACCAATTGAAGTGA+AGG 0.549187 8:+82620444 None:intergenic
CAATACACTTACGATAATGA+AGG 0.553963 8:-82621287 MsG0880047144.01.T01:intron
GCAGCAAACTACCGATTTGG+TGG 0.554019 8:+82620359 None:intergenic
TGCCTACGTTGGAACTTGAA+CGG 0.557254 8:+82619926 None:intergenic
AAAATATAGTCTAAGGCATG+TGG 0.566278 8:-82621378 MsG0880047144.01.T01:CDS
TTGAGGCCTACTTTATCTAA+CGG 0.569291 8:+82621416 None:intergenic
GAAGGTTGCAATGATAGTCT+AGG 0.571353 8:+82619962 None:intergenic
ACCTTTCCTTGATGTCACCC+TGG 0.571952 8:+82619781 None:intergenic
GCTAAAAGGCGCAAAACCAA+CGG 0.578095 8:-82621588 MsG0880047144.01.T01:intron
GTGTATTGATTGGAAACTGT+CGG 0.588864 8:+82621302 None:intergenic
ATGGGAAGATATGTATTGGA+AGG 0.591972 8:-82620028 MsG0880047144.01.T01:CDS
AAGATATGTATTGGAAGGAA+GGG 0.592161 8:-82620023 MsG0880047144.01.T01:CDS
AAGCGATAGTGAAACACTAT+CGG 0.593862 8:-82621108 MsG0880047144.01.T01:CDS
ATTTCGATGTTGGGGAACCG+CGG 0.594832 8:-82620687 MsG0880047144.01.T01:CDS
TTTAAAGTACAACTCATGAA+GGG 0.595122 8:+82620525 None:intergenic
CATGTGGGAAATCAAGGTAG+TGG 0.602107 8:-82621362 MsG0880047144.01.T01:CDS
AAATATAGTCTAAGGCATGT+GGG 0.602830 8:-82621377 MsG0880047144.01.T01:CDS
GATTGAGGTAGGCGAGCGAA+TGG 0.605694 8:+82620547 None:intergenic
ACTATCGGATGAATCGGATG+TGG 0.611682 8:-82621093 MsG0880047144.01.T01:CDS
ACTCATGAAGGGATTGAGGT+AGG 0.618986 8:+82620536 None:intergenic
CCGCAATCTGTGTTCTCTCA+CGG 0.621486 8:-82619824 MsG0880047144.01.T01:CDS
ATGACCATTAACAAAAGTCA+AGG 0.622895 8:-82619878 MsG0880047144.01.T01:CDS
TAATGGGAAATTGCCTACGT+TGG 0.630003 8:+82619915 None:intergenic
AGGATTGCAACGCATTAATG+TGG 0.630790 8:-82620654 MsG0880047144.01.T01:CDS
TCCAGGGTGACATCAAGGAA+AGG 0.638193 8:-82619782 MsG0880047144.01.T01:CDS
GTAGTTTGCTGCCTAAACCA+GGG 0.642560 8:-82620348 MsG0880047144.01.T01:CDS
CCGTGAGAGAACACAGATTG+CGG 0.645526 8:+82619824 None:intergenic
GAGAGAACACAGATTGCGGT+AGG 0.649708 8:+82619828 None:intergenic
TAGTTTGCTGCCTAAACCAG+GGG 0.652223 8:-82620347 MsG0880047144.01.T01:CDS
GCACAATTAAACCAATCATG+CGG 0.653151 8:+82621056 None:intergenic
TAACGAAACTCACAATCGGA+TGG 0.658028 8:-82620284 MsG0880047144.01.T01:CDS
ATTATATGTAGCAGTCTCCA+GGG 0.660772 8:-82619798 MsG0880047144.01.T01:CDS
ACAATTAAACCAATCATGCG+GGG 0.665600 8:+82621058 None:intergenic
CAATTAAACCAATCATGCGG+GGG 0.667754 8:+82621059 None:intergenic
GATTTCAGGAAGCAACATTG+GGG 0.671138 8:-82619999 MsG0880047144.01.T01:CDS
TTCCGTTCAAGTTCCAACGT+AGG 0.693783 8:-82619928 MsG0880047144.01.T01:CDS
CAATCCTTACAAACATACCG+CGG 0.701370 8:+82620670 None:intergenic
AACCAATGTCGTATACAAGG+AGG 0.758634 8:-82619711 MsG0880047144.01.T01:CDS
TATTGATTGGAAACTGTCGG+CGG 0.773076 8:+82621305 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AGTTTTTTTTTTAAATTGAT+TGG - Chr8:82620526-82620545 MsG0880047144.01.T01:CDS 10.0%
!!! TTTGTAAATTTTTTCATTAT+AGG + Chr8:82620067-82620086 None:intergenic 10.0%
!! AATAATAAATTTGAGAGAAT+CGG + Chr8:82620503-82620522 None:intergenic 15.0%
!! ATAAGAAAAATATATCACTA+AGG - Chr8:82621186-82621205 MsG0880047144.01.T01:intron 15.0%
!! TAATTTAGTTACTAAATCAT+TGG - Chr8:82621081-82621100 MsG0880047144.01.T01:CDS 15.0%
!!! AGTTTTTATTACTATAAAAG+TGG - Chr8:82619773-82619792 MsG0880047144.01.T01:CDS 15.0%
!!! TATATTTTTCTTATAGTGAA+AGG + Chr8:82621180-82621199 None:intergenic 15.0%
!! ACGATTAATAATTACAAGAA+TGG - Chr8:82621244-82621263 MsG0880047144.01.T01:intron 20.0%
!! CGATTAATAATTACAAGAAT+GGG - Chr8:82621245-82621264 MsG0880047144.01.T01:intron 20.0%
!! GAAATATTCTGAATAATCAA+GGG + Chr8:82620589-82620608 None:intergenic 20.0%
!! TCACAAAATTTAACAAAACA+GGG + Chr8:82620124-82620143 None:intergenic 20.0%
!! TTCACAAAATTTAACAAAAC+AGG + Chr8:82620125-82620144 None:intergenic 20.0%
!!! AGACAATATCTTTTAAAAAC+AGG + Chr8:82620101-82620120 None:intergenic 20.0%
!!! TAGAAAGAGCAAATATTTTT+TGG - Chr8:82620794-82620813 MsG0880047144.01.T01:intron 20.0%
!!! TTCTCATTTTTTTTCCTTTA+GGG - Chr8:82620146-82620165 MsG0880047144.01.T01:intron 20.0%
!!! TTTCTCATTTTTTTTCCTTT+AGG - Chr8:82620145-82620164 MsG0880047144.01.T01:intron 20.0%
!!! TTTTAAAAACAGGACATTAA+AGG + Chr8:82620091-82620110 None:intergenic 20.0%
! ATATACAATTGTGCAAACTT+AGG + Chr8:82620975-82620994 None:intergenic 25.0%
! ATTAATGTGGTATGAAGAAA+GGG - Chr8:82620650-82620669 MsG0880047144.01.T01:CDS 25.0%
! ATTCAGAATATTTCGATGTT+GGG - Chr8:82620595-82620614 MsG0880047144.01.T01:CDS 25.0%
! CGAAATATTCTGAATAATCA+AGG + Chr8:82620590-82620609 None:intergenic 25.0%
! GAAATAAGAAAATTACCTCA+CGG + Chr8:82621036-82621055 None:intergenic 25.0%
! TATTCAGAATATTTCGATGT+TGG - Chr8:82620594-82620613 MsG0880047144.01.T01:CDS 25.0%
! TGGAAATTTACCAACTATAT+CGG + Chr8:82620470-82620489 None:intergenic 25.0%
!! ATTATCGTAAGTGTATTGAT+TGG + Chr8:82620002-82620021 None:intergenic 25.0%
!! TTTAAAGTACAACTCATGAA+GGG + Chr8:82620769-82620788 None:intergenic 25.0%
!!! TCTCATTTTTTTTCCTTTAG+GGG - Chr8:82620147-82620166 MsG0880047144.01.T01:intron 25.0%
AAGAAAGGGCAAATAAAAAC+AGG - Chr8:82620664-82620683 MsG0880047144.01.T01:CDS 30.0%
AAGAATGGGAAGATATGTAT+TGG - Chr8:82621259-82621278 MsG0880047144.01.T01:intron 30.0%
AAGATATGTATTGGAAGGAA+GGG - Chr8:82621268-82621287 MsG0880047144.01.T01:intron 30.0%
ACATCATGCCATCTAAAAAA+AGG - Chr8:82620410-82620429 MsG0880047144.01.T01:CDS 30.0%
ACATTGAACAACATTGATCA+AGG + Chr8:82619815-82619834 None:intergenic 30.0%
ACGCAAGAGAACAAAATTAT+TGG - Chr8:82620438-82620457 MsG0880047144.01.T01:CDS 30.0%
ACTTTACCGTTAGATAAAGT+AGG - Chr8:82619869-82619888 MsG0880047144.01.T01:CDS 30.0%
AGGAATTTAGACATAAATGC+TGG - Chr8:82621206-82621225 MsG0880047144.01.T01:intron 30.0%
ATACTCATAACTGACGAAAA+TGG - Chr8:82621539-82621558 MsG0880047144.01.T01:intron 30.0%
ATCGATAAGACCAAAAACAA+TGG - Chr8:82620870-82620889 MsG0880047144.01.T01:intron 30.0%
ATGACCATTAACAAAAGTCA+AGG - Chr8:82621413-82621432 MsG0880047144.01.T01:CDS 30.0%
ATTGCGAAACAAACAGTAAT+GGG + Chr8:82621395-82621414 None:intergenic 30.0%
CAATACACTTACGATAATGA+AGG - Chr8:82620004-82620023 MsG0880047144.01.T01:CDS 30.0%
CATTAATGTGGTATGAAGAA+AGG - Chr8:82620649-82620668 MsG0880047144.01.T01:CDS 30.0%
GAATCAAAATTACATACCGT+TGG + Chr8:82619722-82619741 None:intergenic 30.0%
GGTCAATCATTAAAACAAGT+TGG - Chr8:82621434-82621453 MsG0880047144.01.T01:CDS 30.0%
TCTCCATTCATTGTAAAAAC+TGG + Chr8:82620906-82620925 None:intergenic 30.0%
TTCAGAATATTTCGATGTTG+GGG - Chr8:82620596-82620615 MsG0880047144.01.T01:CDS 30.0%
! AAAATATAGTCTAAGGCATG+TGG - Chr8:82619913-82619932 MsG0880047144.01.T01:CDS 30.0%
! AAATATAGTCTAAGGCATGT+GGG - Chr8:82619914-82619933 MsG0880047144.01.T01:CDS 30.0%
! TTGACCTTGACTTTTGTTAA+TGG + Chr8:82621420-82621439 None:intergenic 30.0%
!! CTTTAAAGTACAACTCATGA+AGG + Chr8:82620770-82620789 None:intergenic 30.0%
AACCTACCATAATCATTGTC+AGG + Chr8:82620286-82620305 None:intergenic 35.0%
AAGCGATAGTGAAACACTAT+CGG - Chr8:82620183-82620202 MsG0880047144.01.T01:intron 35.0%
AATTATATGTAGCAGTCTCC+AGG - Chr8:82621492-82621511 MsG0880047144.01.T01:intron 35.0%
ACAATTAAACCAATCATGCG+GGG + Chr8:82620236-82620255 None:intergenic 35.0%
ATGCAGCACATAGAAAATTC+TGG + Chr8:82620702-82620721 None:intergenic 35.0%
ATGGGAAGATATGTATTGGA+AGG - Chr8:82621263-82621282 MsG0880047144.01.T01:intron 35.0%
ATTATATGTAGCAGTCTCCA+GGG - Chr8:82621493-82621512 MsG0880047144.01.T01:intron 35.0%
CACAATTAAACCAATCATGC+GGG + Chr8:82620237-82620256 None:intergenic 35.0%
CATTGCGAAACAAACAGTAA+TGG + Chr8:82621396-82621415 None:intergenic 35.0%
CCATCAACGCATAAAGAAAA+TGG - Chr8:82619845-82619864 MsG0880047144.01.T01:CDS 35.0%
CCATTCATTGTAAAAACTGG+TGG + Chr8:82620903-82620922 None:intergenic 35.0%
GAAGATATGTATTGGAAGGA+AGG - Chr8:82621267-82621286 MsG0880047144.01.T01:intron 35.0%
GATGTTCCTGACAATGATTA+TGG - Chr8:82620277-82620296 MsG0880047144.01.T01:intron 35.0%
GCACAATTAAACCAATCATG+CGG + Chr8:82620238-82620257 None:intergenic 35.0%
GGAGAAAATTACCACCAAAT+CGG - Chr8:82620921-82620940 MsG0880047144.01.T01:intron 35.0%
GTCCTGGAAAATATAGTCTA+AGG - Chr8:82619906-82619925 MsG0880047144.01.T01:CDS 35.0%
TGAAACACTATCGGATGAAT+CGG - Chr8:82620192-82620211 MsG0880047144.01.T01:intron 35.0%
TGATTTCAGGAAGCAACATT+GGG - Chr8:82621291-82621310 MsG0880047144.01.T01:CDS 35.0%
TGGAGACTGCTACATATAAT+TGG + Chr8:82621493-82621512 None:intergenic 35.0%
TTCCTGACAATGATTATGGT+AGG - Chr8:82620281-82620300 MsG0880047144.01.T01:CDS 35.0%
TTGAGGCCTACTTTATCTAA+CGG + Chr8:82619878-82619897 None:intergenic 35.0%
TTGGTTGAATCCGATATAGT+TGG - Chr8:82620457-82620476 MsG0880047144.01.T01:CDS 35.0%
! AGAGAATCGGCAAGTATTTT+TGG + Chr8:82620490-82620509 None:intergenic 35.0%
! CCACCAGTTTTTACAATGAA+TGG - Chr8:82620900-82620919 MsG0880047144.01.T01:intron 35.0%
! CCATTTTCTTTATGCGTTGA+TGG + Chr8:82619848-82619867 None:intergenic 35.0%
! CTATATTTTCCAGGACCAAT+TGG + Chr8:82619902-82619921 None:intergenic 35.0%
! CTGATAACGAAACTCACAAT+CGG - Chr8:82621003-82621022 MsG0880047144.01.T01:intron 35.0%
! TGCCTTAGACTATATTTTCC+AGG + Chr8:82619911-82619930 None:intergenic 35.0%
!! ATAAATGCTGGCTTATGCAA+TGG - Chr8:82621218-82621237 MsG0880047144.01.T01:intron 35.0%
!! GTGTATTGATTGGAAACTGT+CGG + Chr8:82619992-82620011 None:intergenic 35.0%
!!! CGTAGTTTTAAATGACACGA+AGG - Chr8:82619741-82619760 MsG0880047144.01.T01:CDS 35.0%
!!! CGTCTTGTCCTTTTTTTAGA+TGG + Chr8:82620421-82620440 None:intergenic 35.0%
AAAGTAGGCCTCAAACCAAT+TGG - Chr8:82619884-82619903 MsG0880047144.01.T01:CDS 40.0%
AACCAATGTCGTATACAAGG+AGG - Chr8:82621580-82621599 MsG0880047144.01.T01:intron 40.0%
AACGGAATTCTAGTGTCTGA+AGG + Chr8:82621350-82621369 None:intergenic 40.0%
AGGATTGCAACGCATTAATG+TGG - Chr8:82620637-82620656 MsG0880047144.01.T01:CDS 40.0%
ATATCAACGTCATCCCCTAA+AGG + Chr8:82620163-82620182 None:intergenic 40.0%
ATGTTCGCCTTCACTTCAAT+TGG - Chr8:82620840-82620859 MsG0880047144.01.T01:intron 40.0%
CAATCCTTACAAACATACCG+CGG + Chr8:82620624-82620643 None:intergenic 40.0%
CAATTAAACCAATCATGCGG+GGG + Chr8:82620235-82620254 None:intergenic 40.0%
CACAACCAATGTCGTATACA+AGG - Chr8:82621577-82621596 MsG0880047144.01.T01:intron 40.0%
CTTTGCACCAATTGAAGTGA+AGG + Chr8:82620850-82620869 None:intergenic 40.0%
GAAGGTTGCAATGATAGTCT+AGG + Chr8:82621332-82621351 None:intergenic 40.0%
GATTTCAGGAAGCAACATTG+GGG - Chr8:82621292-82621311 MsG0880047144.01.T01:CDS 40.0%
GCAAGACATGCACTCATATT+TGG + Chr8:82621060-82621079 None:intergenic 40.0%
GTGATTTCAGGAAGCAACAT+TGG - Chr8:82621290-82621309 MsG0880047144.01.T01:CDS 40.0%
TAACGAAACTCACAATCGGA+TGG - Chr8:82621007-82621026 MsG0880047144.01.T01:intron 40.0%
TAATGGGAAATTGCCTACGT+TGG + Chr8:82621379-82621398 None:intergenic 40.0%
TACAACTCATGAAGGGATTG+AGG + Chr8:82620762-82620781 None:intergenic 40.0%
! TATTGATTGGAAACTGTCGG+CGG + Chr8:82619989-82620008 None:intergenic 40.0%
! TGGTGCTCTTCCATTGTTTT+TGG + Chr8:82620883-82620902 None:intergenic 40.0%
! TTTTCTATGTGCTGCATGCA+AGG - Chr8:82620705-82620724 MsG0880047144.01.T01:intron 40.0%
ACTATCGGATGAATCGGATG+TGG - Chr8:82620198-82620217 MsG0880047144.01.T01:intron 45.0%
ACTCATGAAGGGATTGAGGT+AGG + Chr8:82620758-82620777 None:intergenic 45.0%
CACCTCCTTGTATACGACAT+TGG + Chr8:82621585-82621604 None:intergenic 45.0%
CATGTGGGAAATCAAGGTAG+TGG - Chr8:82619929-82619948 MsG0880047144.01.T01:CDS 45.0%
CTAAGGCATGTGGGAAATCA+AGG - Chr8:82619923-82619942 MsG0880047144.01.T01:CDS 45.0%
TGCCTACGTTGGAACTTGAA+CGG + Chr8:82621368-82621387 None:intergenic 45.0%
TTGGAAGGAAGGGTGATTTC+AGG - Chr8:82621278-82621297 MsG0880047144.01.T01:intron 45.0%
! GCTAAAAGGCGCAAAACCAA+CGG - Chr8:82619703-82619722 MsG0880047144.01.T01:CDS 45.0%
! TAGGCAGCAAACTACCGATT+TGG + Chr8:82620938-82620957 None:intergenic 45.0%
! TTCCGTTCAAGTTCCAACGT+AGG - Chr8:82621363-82621382 MsG0880047144.01.T01:CDS 45.0%
!! GTAGTTTGCTGCCTAAACCA+GGG - Chr8:82620943-82620962 MsG0880047144.01.T01:intron 45.0%
!! TAGTTTGCTGCCTAAACCAG+GGG - Chr8:82620944-82620963 MsG0880047144.01.T01:intron 45.0%
!! TTAGGTTGATCCCCTGGTTT+AGG + Chr8:82620957-82620976 None:intergenic 45.0%
!! TTCCAGGACCAATTGGTTTG+AGG + Chr8:82619895-82619914 None:intergenic 45.0%
!!! GTTGGTTTTGCGCCTTTTAG+CGG + Chr8:82619704-82619723 None:intergenic 45.0%
ACCTTTCCTTGATGTCACCC+TGG + Chr8:82621513-82621532 None:intergenic 50.0%
AGATTGAACCCCCGCATGAT+TGG - Chr8:82620224-82620243 MsG0880047144.01.T01:intron 50.0%
AGGAAGCAACATTGGGGACA+AGG - Chr8:82621298-82621317 MsG0880047144.01.T01:CDS 50.0%
ATTTCGATGTTGGGGAACCG+CGG - Chr8:82620604-82620623 MsG0880047144.01.T01:CDS 50.0%
CCGCAATCTGTGTTCTCTCA+CGG - Chr8:82621467-82621486 MsG0880047144.01.T01:intron 50.0%
CCGTGAGAGAACACAGATTG+CGG + Chr8:82621470-82621489 None:intergenic 50.0%
CTATGTGCTGCATGCAAGGA+AGG - Chr8:82620709-82620728 MsG0880047144.01.T01:intron 50.0%
GAGAGAACACAGATTGCGGT+AGG + Chr8:82621466-82621485 None:intergenic 50.0%
GATCATTTGCGTGCCACAGA+AGG - Chr8:82620371-82620390 MsG0880047144.01.T01:CDS 50.0%
GGAACCGCGGTATGTTTGTA+AGG - Chr8:82620617-82620636 MsG0880047144.01.T01:CDS 50.0%
TCCAGGGTGACATCAAGGAA+AGG - Chr8:82621509-82621528 MsG0880047144.01.T01:intron 50.0%
!! GCAAACTTAGGTTGATCCCC+TGG + Chr8:82620963-82620982 None:intergenic 50.0%
!! GCAGCAAACTACCGATTTGG+TGG + Chr8:82620935-82620954 None:intergenic 50.0%
!! GGTAGTTTGCTGCCTAAACC+AGG - Chr8:82620942-82620961 MsG0880047144.01.T01:intron 50.0%
ACAATCGGATGGCATCCGTG+AGG - Chr8:82621018-82621037 MsG0880047144.01.T01:CDS 55.0%
ATTTGCGTGCCACAGAAGGC+TGG - Chr8:82620375-82620394 MsG0880047144.01.T01:CDS 55.0%
CAGTCTCCAGGGTGACATCA+AGG - Chr8:82621504-82621523 MsG0880047144.01.T01:intron 55.0%
GATTGAGGTAGGCGAGCGAA+TGG + Chr8:82620747-82620766 None:intergenic 55.0%
GGCCTCAAACCAATTGGTCC+TGG - Chr8:82619890-82619909 MsG0880047144.01.T01:CDS 55.0%
ACTGTCGGCGGAACGTCTTC+TGG + Chr8:82619977-82619996 None:intergenic 60.0%
CCACAGAAGGCTGGAGGTGA+TGG - Chr8:82620384-82620403 MsG0880047144.01.T01:CDS 60.0%
CCATCACCTCCAGCCTTCTG+TGG + Chr8:82620387-82620406 None:intergenic 60.0%
CTGTCGGCGGAACGTCTTCT+GGG + Chr8:82619976-82619995 None:intergenic 60.0%
TGCGTGCCACAGAAGGCTGG+AGG - Chr8:82620378-82620397 MsG0880047144.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr8 gene 82619694 82621619 82619694 ID=MsG0880047144.01;Name=MsG0880047144.01
Chr8 mRNA 82619694 82621619 82619694 ID=MsG0880047144.01.T01;Parent=MsG0880047144.01;Name=MsG0880047144.01.T01;_AED=0.18;_eAED=0.18;_QI=0|0|0|0.4|0.5|0.4|5|0|404
Chr8 exon 82621589 82621619 82621589 ID=MsG0880047144.01.T01:exon:20403;Parent=MsG0880047144.01.T01
Chr8 exon 82621288 82621476 82621288 ID=MsG0880047144.01.T01:exon:20402;Parent=MsG0880047144.01.T01
Chr8 exon 82621015 82621146 82621015 ID=MsG0880047144.01.T01:exon:20401;Parent=MsG0880047144.01.T01
Chr8 exon 82620279 82620712 82620279 ID=MsG0880047144.01.T01:exon:20400;Parent=MsG0880047144.01.T01
Chr8 exon 82619694 82620122 82619694 ID=MsG0880047144.01.T01:exon:20399;Parent=MsG0880047144.01.T01
Chr8 CDS 82621589 82621619 82621589 ID=MsG0880047144.01.T01:cds;Parent=MsG0880047144.01.T01
Chr8 CDS 82621288 82621476 82621288 ID=MsG0880047144.01.T01:cds;Parent=MsG0880047144.01.T01
Chr8 CDS 82621015 82621146 82621015 ID=MsG0880047144.01.T01:cds;Parent=MsG0880047144.01.T01
Chr8 CDS 82620279 82620712 82620279 ID=MsG0880047144.01.T01:cds;Parent=MsG0880047144.01.T01
Chr8 CDS 82619694 82620122 82619694 ID=MsG0880047144.01.T01:cds;Parent=MsG0880047144.01.T01
Gene Sequence

>MsG0880047144.01.T01

ATGGAATCCGCTAAAAGGCGCAAAACCAACGCTGACACTCCATCAACGCATAAAGAAAATGGAACTTTACCGTTAGATAAAGTAGGCCTCAAACCAATTGGTCCTGGAAAATATAGTCTAAGGCATGTGGGAAATCAAGGTAGTGGTCTCAGAATTCAAAACATATGCCCAGAAGACGTTCCGCCGACAGTTTCCAATCAATACACTTACGATAATGAAGGGGATGACGTTGATATAAGCGATAGTGAAACACTATCGGATGAATCGGATGTGGATGAGATTGAACCCCCGCATGATTGGTTTAATTGTGCACAAAATAGCGAGCAATATGATGTTCCTGACAATGATTATGAATATTTCGATGTTGGGGAACCGCGGTATGTTTGTAAGGATTGCAACGCATTAATGTGGTATGAAGAAAGGGCAAATAAAAACAGGCGCACGTCAACACCAGAATTTTCTATGTGCTGCATGCAAGGAAGGATAGAGATTGCACCATTCGCTCGCCTACCTCAATCCCTTCATGAGTTGTACTTTAAAGATGATAGAAAGAGCAAATATTTTTTGGATAACATTAGATCATTTAACAGCATGTTCGCCTTCACTTCAATTGGTGCAAAGATCGATAAGACCAAAAACAATGGAAGAGCACCACCAGTTTTTACAATGAATGGAGAAAATTACCACCAAATCGGTAGTTTGCTGCCTAAACCAGGGGATCAACCTAAGTTTGCACAATTGTATATATATGATACTGATAACGAAACTCACAATCGGATGGCATCCAAAAATATATCACTAAGGAATTTAGACATAAATGCTGGCTTATGCAATGGAACACGATTAATAATTACAAGAATGGGAAGATATGTATTGGAAGGAAGGGTGATTTCAGGAAGCAACATTGGGGACAAGGTGTTTGTGCCTAGACTATCATTGCAACCTTCAGACACTAGAATTCCGTTCAAGTTCCAACGTAGGCAATTTCCCATTACTGTTTGTTTCGCAATGACCATTAACAAAAGTCAAGGTCAATCATTAAAACAAGTTGGCGTATACCTACCGCAATCTGTGTTCTCTCACGGCCAATTATATGTAGCAGTCTCCAGGGTGACATCAAGGAAAGGTTTGAAAATACTCATAACTGACGAAAATGGAGATTGCATTGATAACACAACCAATGTCGTATACAAGGAGGTGTTTCATAATGTATAG
Protein sequence

>MsG0880047144.01.T01

MESAKRRKTNADTPSTHKENGTLPLDKVGLKPIGPGKYSLRHVGNQGSGLRIQNICPEDVPPTVSNQYTYDNEGDDVDISDSETLSDESDVDEIEPPHDWFNCAQNSEQYDVPDNDYEYFDVGEPRYVCKDCNALMWYEERANKNRRTSTPEFSMCCMQGRIEIAPFARLPQSLHELYFKDDRKSKYFLDNIRSFNSMFAFTSIGAKIDKTKNNGRAPPVFTMNGENYHQIGSLLPKPGDQPKFAQLYIYDTDNETHNRMASKNISLRNLDINAGLCNGTRLIITRMGRYVLEGRVISGSNIGDKVFVPRLSLQPSDTRIPFKFQRRQFPITVCFAMTINKSQGQSLKQVGVYLPQSVFSHGQLYVAVSRVTSRKGLKILITDENGDCIDNTTNVVYKEVFHNV*