AlfalfaGEDB | MsG0280009646.01

M. sativa cultivar ZhongmuNo.1 / MsG0280009646.01

KEGG: -
GO: -
PFAM: PF03092

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280009646.01.T01	KEH39874.1	88.372	129	15	0	19	147	198	326	1.23E-68	223

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280009646.01.T01	Q5FV41	65.354	127	44	0	21	147	318	444	1.15E-49	169

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280009646.01.T01	A0A072VD09	88.372	129	15	0	19	147	198	326	5.87e-69	223

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080047869.01	MsG0280009646.01	0.820295	7.397114e-53	5.829752e-50
MsG0080047944.01	MsG0280009646.01	0.806525	7.885500e-50	4.289517e-47
MsG0080047957.01	MsG0280009646.01	0.814492	1.498518e-51	1.007029e-48
MsG0080047959.01	MsG0280009646.01	0.814286	1.664351e-51	1.112186e-48
MsG0080048231.01	MsG0280009646.01	0.808360	3.218254e-50	1.836457e-47
MsG0080048874.01	MsG0280009646.01	0.802862	4.587507e-49	2.271585e-46
MsG0180000470.01	MsG0280009646.01	0.839057	1.989756e-57	2.715794e-54
MsG0180001063.01	MsG0280009646.01	0.809189	2.140089e-50	1.248227e-47
MsG0180001381.01	MsG0280009646.01	0.802746	4.847844e-49	2.393447e-46
MsG0180001410.01	MsG0280009646.01	0.806027	1.003851e-49	5.391973e-47
MsG0180001663.01	MsG0280009646.01	0.820003	8.626686e-53	6.744250e-50
MsG0180001971.01	MsG0280009646.01	0.815886	7.346956e-52	5.127638e-49
MsG0180002089.01	MsG0280009646.01	0.833655	4.707924e-56	5.456901e-53
MsG0180002195.01	MsG0280009646.01	0.804458	2.139782e-49	1.103829e-46
MsG0180002282.01	MsG0280009646.01	0.841498	4.581619e-58	6.744878e-55
MsG0180002709.01	MsG0280009646.01	0.815427	9.294785e-52	6.406452e-49
MsG0180002955.01	MsG0280009646.01	0.814859	1.242729e-51	8.433737e-49
MsG0180003669.01	MsG0280009646.01	0.806842	6.758421e-50	3.706663e-47
MsG0180003673.01	MsG0280009646.01	0.816427	5.561729e-52	3.939577e-49
MsG0180003686.01	MsG0280009646.01	0.816082	6.643780e-52	4.662226e-49
MsG0180004085.01	MsG0280009646.01	0.804043	2.610469e-49	1.332399e-46
MsG0180004275.01	MsG0280009646.01	0.806572	7.708974e-50	4.198503e-47
MsG0180004465.01	MsG0280009646.01	0.814586	1.428763e-51	9.625323e-49
MsG0180004996.01	MsG0280009646.01	0.807742	4.357009e-50	2.446112e-47
MsG0180005050.01	MsG0280009646.01	0.801722	7.873355e-49	3.786981e-46
MsG0180005185.01	MsG0280009646.01	0.805634	1.214531e-49	6.458000e-47
MsG0180005842.01	MsG0280009646.01	0.800887	1.167415e-48	5.498342e-46
MsG0180005960.01	MsG0280009646.01	0.826533	2.575184e-54	2.421519e-51
MsG0180005974.01	MsG0280009646.01	0.806745	7.086878e-50	3.876857e-47
MsG0280006324.01	MsG0280009646.01	0.804270	2.341232e-49	1.201918e-46
MsG0280006325.01	MsG0280009646.01	0.802187	6.318969e-49	3.075509e-46
MsG0280006588.01	MsG0280009646.01	0.819840	9.399558e-53	7.315127e-50
MsG0280007864.01	MsG0280009646.01	-0.817028	4.076889e-52	2.935975e-49
MsG0280008112.01	MsG0280009646.01	0.821452	4.008504e-53	3.262289e-50
MsG0280008615.01	MsG0280009646.01	0.819773	9.736667e-53	7.563643e-50
MsG0280008894.01	MsG0280009646.01	0.831904	1.281247e-55	1.409897e-52
MsG0280009024.01	MsG0280009646.01	0.822610	2.160043e-53	1.817100e-50
MsG0280009317.01	MsG0280009646.01	0.802843	4.627684e-49	2.290525e-46
MsG0280009646.01	MsG0280010443.01	0.816397	5.648680e-52	3.998047e-49
MsG0280009646.01	MsG0280010722.01	0.804260	2.353192e-49	1.207713e-46
MsG0280009646.01	MsG0280010796.01	0.806371	8.498043e-50	4.604597e-47
MsG0280009646.01	MsG0280011032.01	0.835625	1.504620e-56	1.850175e-53
MsG0280009646.01	MsG0280011446.01	0.800821	1.204027e-48	5.660942e-46
MsG0280009646.01	MsG0380011617.01	0.815692	8.115342e-52	5.634357e-49
MsG0280009646.01	MsG0380011759.01	0.823310	1.483735e-53	1.272893e-50
MsG0280009646.01	MsG0380011786.01	0.810591	1.067955e-50	6.463854e-48
MsG0280009646.01	MsG0380011870.01	0.822991	1.761473e-53	1.497701e-50
MsG0280009646.01	MsG0380011895.01	0.826158	3.163462e-54	2.943116e-51
MsG0280009646.01	MsG0380012005.01	0.801524	8.647555e-49	4.138732e-46
MsG0280009646.01	MsG0380012330.01	0.804801	1.814150e-49	9.442368e-47
MsG0280009646.01	MsG0380014135.01	0.802531	5.367325e-49	2.635382e-46
MsG0280009646.01	MsG0380014142.01	0.833499	5.150490e-56	5.942155e-53
MsG0280009646.01	MsG0380014251.01	0.833074	6.572760e-56	7.488036e-53
MsG0280009646.01	MsG0380014573.01	0.807410	5.125407e-50	2.852741e-47
MsG0280009646.01	MsG0380014770.01	0.820614	6.249651e-53	4.968885e-50
MsG0280009646.01	MsG0380014866.01	0.802614	5.159506e-49	2.538777e-46
MsG0280009646.01	MsG0380016064.01	0.810247	1.267205e-50	7.600302e-48
MsG0280009646.01	MsG0380016475.01	0.818016	2.442419e-52	1.807077e-49
MsG0280009646.01	MsG0380016581.01	0.822584	2.190604e-53	1.841373e-50
MsG0280009646.01	MsG0380016624.01	0.806739	7.106343e-50	3.887051e-47
MsG0280009646.01	MsG0380017040.01	0.801916	7.184609e-49	3.472879e-46
MsG0280009646.01	MsG0380017048.01	0.808334	3.259038e-50	1.858449e-47
MsG0280009646.01	MsG0380017140.01	0.811166	8.022109e-51	4.930031e-48
MsG0280009646.01	MsG0380017326.01	0.826591	2.494359e-54	2.349368e-51
MsG0280009646.01	MsG0380017543.01	0.823988	1.029447e-53	9.002458e-51
MsG0280009646.01	MsG0380017551.01	-0.822482	2.314166e-53	1.939400e-50
MsG0280009646.01	MsG0380017822.01	0.812845	3.453125e-51	2.219078e-48
MsG0280009646.01	MsG0380017848.01	0.817733	2.828831e-52	2.076917e-49
MsG0280009646.01	MsG0480018236.01	0.820901	5.369511e-53	4.303770e-50
MsG0280009646.01	MsG0480018318.01	0.803572	3.270619e-49	1.649330e-46
MsG0280009646.01	MsG0480018659.01	0.818064	2.381627e-52	1.764409e-49
MsG0280009646.01	MsG0480018660.01	0.814405	1.566574e-51	1.050284e-48
MsG0280009646.01	MsG0480018883.01	0.823629	1.249810e-53	1.082000e-50
MsG0280009646.01	MsG0480019035.01	0.811309	7.466095e-51	4.605625e-48
MsG0280009646.01	MsG0480019336.01	0.808022	3.798262e-50	2.148081e-47
MsG0280009646.01	MsG0480019435.01	0.820200	7.776069e-53	6.112601e-50
MsG0280009646.01	MsG0480019730.01	0.824648	7.201401e-54	6.418230e-51
MsG0280009646.01	MsG0480020499.01	0.805938	1.048342e-49	5.618060e-47
MsG0280009646.01	MsG0480021536.01	0.801593	8.366926e-49	4.011268e-46
MsG0280009646.01	MsG0480021853.01	0.806107	9.658497e-50	5.198369e-47
MsG0280009646.01	MsG0480022068.01	0.804965	1.676364e-49	8.762156e-47
MsG0280009646.01	MsG0480022259.01	0.844311	8.176264e-59	1.314698e-55
MsG0280009646.01	MsG0480022262.01	0.837016	6.665074e-57	8.547166e-54
MsG0280009646.01	MsG0480022615.01	-0.809992	1.438048e-50	8.568139e-48
MsG0280009646.01	MsG0480023248.01	0.815104	1.097014e-51	7.493851e-49
MsG0280009646.01	MsG0480023427.01	0.802003	6.894168e-49	3.339819e-46
MsG0280009646.01	MsG0480023670.01	0.800902	1.159232e-48	5.461878e-46
MsG0280009646.01	MsG0580024391.01	0.802787	4.752999e-49	2.349152e-46
MsG0280009646.01	MsG0580024621.01	0.807610	4.648071e-50	2.600375e-47
MsG0280009646.01	MsG0580025448.01	0.802951	4.397041e-49	2.182161e-46
MsG0280009646.01	MsG0580025638.01	0.841384	4.909844e-58	7.202443e-55
MsG0280009646.01	MsG0580025666.01	0.824147	9.450236e-54	8.301553e-51
MsG0280009646.01	MsG0580025758.01	0.829674	4.509673e-55	4.647799e-52
MsG0280009646.01	MsG0580026165.01	0.800883	1.169369e-48	5.506960e-46
MsG0280009646.01	MsG0580026197.01	0.808725	2.690063e-50	1.549574e-47
MsG0280009646.01	MsG0580026342.01	0.801127	1.042392e-48	4.939424e-46
MsG0280009646.01	MsG0580027679.01	0.802781	4.766483e-49	2.355467e-46
MsG0280009646.01	MsG0580027687.01	0.821938	3.094164e-53	2.553030e-50
MsG0280009646.01	MsG0580027688.01	0.841487	4.613889e-58	6.790209e-55
MsG0280009646.01	MsG0580027719.01	0.807577	4.723513e-50	2.640279e-47
MsG0280009646.01	MsG0580027745.01	0.808929	2.431855e-50	1.408453e-47
MsG0280009646.01	MsG0580027922.01	0.811907	5.535701e-51	3.469311e-48
MsG0280009646.01	MsG0580027926.01	0.803065	4.164631e-49	2.072752e-46
MsG0280009646.01	MsG0580028527.01	0.814832	1.260183e-51	8.545949e-49
MsG0280009646.01	MsG0580029204.01	0.812233	4.699673e-51	2.971789e-48
MsG0280009646.01	MsG0580029554.01	0.821532	3.841295e-53	3.133203e-50
MsG0280009646.01	MsG0580029999.01	-0.813899	2.026648e-51	1.340128e-48
MsG0280009646.01	MsG0680030316.01	0.839830	1.252752e-57	1.751047e-54
MsG0280009646.01	MsG0680030366.01	0.801508	8.710350e-49	4.167167e-46
MsG0280009646.01	MsG0680030561.01	0.833970	3.926635e-56	4.595327e-53
MsG0280009646.01	MsG0680030667.01	0.812352	4.426332e-51	2.807967e-48
MsG0280009646.01	MsG0680031355.01	0.813644	2.305681e-51	1.514167e-48
MsG0280009646.01	MsG0680031505.01	0.815442	9.226285e-52	6.361928e-49
MsG0280009646.01	MsG0680032058.01	0.800254	1.571139e-48	7.281545e-46
MsG0280009646.01	MsG0680032157.01	0.813458	2.534226e-51	1.655958e-48
MsG0280009646.01	MsG0680032801.01	0.813547	2.422295e-51	1.586604e-48
MsG0280009646.01	MsG0680032996.01	0.801834	7.467194e-49	3.601998e-46
MsG0280009646.01	MsG0680033228.01	0.800198	1.612515e-48	7.462531e-46
MsG0280009646.01	MsG0680033379.01	0.850284	1.875587e-60	3.655419e-57
MsG0280009646.01	MsG0680035005.01	0.810851	9.385961e-51	5.720639e-48
MsG0280009646.01	MsG0680035444.01	0.849809	2.547038e-60	4.887164e-57
MsG0280009646.01	MsG0680035573.01	0.800303	1.535358e-48	7.124873e-46
MsG0280009646.01	MsG0680035828.01	0.808923	2.439922e-50	1.412897e-47
MsG0280009646.01	MsG0780035957.01	0.803797	2.937215e-49	1.489689e-46
MsG0280009646.01	MsG0780036080.01	0.803261	3.793142e-49	1.897447e-46
MsG0280009646.01	MsG0780036128.01	0.820648	6.136759e-53	4.883680e-50
MsG0280009646.01	MsG0780036810.01	0.814421	1.554176e-51	1.042395e-48
MsG0280009646.01	MsG0780038092.01	0.821657	3.593421e-53	2.941475e-50
MsG0280009646.01	MsG0780038654.01	0.806479	8.064556e-50	4.381768e-47
MsG0280009646.01	MsG0780038827.01	0.826524	2.587039e-54	2.432048e-51
MsG0280009646.01	MsG0780039178.01	0.802732	4.877962e-49	2.407537e-46
MsG0280009646.01	MsG0780039832.01	0.805356	1.388805e-49	7.332098e-47
MsG0280009646.01	MsG0780039867.01	-0.820987	5.128918e-53	4.121129e-50
MsG0280009646.01	MsG0780040576.01	-0.815310	9.872214e-52	6.782511e-49
MsG0280009646.01	MsG0780040596.01	0.816522	5.294364e-52	3.760147e-49
MsG0280009646.01	MsG0780040704.01	0.812086	5.059156e-51	3.186307e-48
MsG0280009646.01	MsG0780040788.01	0.832238	1.059521e-55	1.177162e-52
MsG0280009646.01	MsG0780041387.01	0.804699	1.905497e-49	9.891261e-47
MsG0280009646.01	MsG0880042161.01	0.824902	6.275444e-54	5.633765e-51
MsG0280009646.01	MsG0880042247.01	0.818320	2.084938e-52	1.555550e-49
MsG0280009646.01	MsG0880042454.01	0.802213	6.240805e-49	3.039537e-46
MsG0280009646.01	MsG0880042616.01	0.810534	1.099049e-50	6.641645e-48
MsG0280009646.01	MsG0880042800.01	0.818140	2.289307e-52	1.699608e-49
MsG0280009646.01	MsG0880042966.01	0.809011	2.336582e-50	1.356250e-47
MsG0280009646.01	MsG0880043172.01	0.821215	4.545611e-53	3.675447e-50
MsG0280009646.01	MsG0880043509.01	0.841415	4.819781e-58	7.077330e-55
MsG0280009646.01	MsG0880043812.01	0.834340	3.171396e-56	3.752728e-53
MsG0280009646.01	MsG0880043941.01	0.803532	3.332459e-49	1.678788e-46
MsG0280009646.01	MsG0880044573.01	0.818273	2.136180e-52	1.591658e-49
MsG0280009646.01	MsG0880047144.01	0.821792	3.344755e-53	2.748440e-50

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280009646.01.T01	MTR_1g014250	88.372	129	15	0	19	147	198	326	1.49e-72	223
MsG0280009646.01.T01	MTR_1g014250	88.372	129	15	0	19	147	321	449	8.52e-71	222
MsG0280009646.01.T01	MTR_5g007060	73.469	98	11	1	19	116	185	267	1.49e-36	127
MsG0280009646.01.T01	MTR_1g014220	37.500	136	44	1	21	156	318	412	4.13e-18	80.9
MsG0280009646.01.T01	MTR_3g051190	34.959	123	80	0	21	143	349	471	9.91e-15	71.2
MsG0280009646.01.T01	MTR_1g103540	43.478	69	37	2	78	145	18	85	1.31e-11	58.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280009646.01.T01	AT5G25050	65.354	127	44	0	21	147	318	444	1.17e-50	169
MsG0280009646.01.T01	AT5G25040	60.630	127	50	0	21	147	169	295	6.22e-47	156
MsG0280009646.01.T01	AT5G25040	60.630	127	50	0	21	147	316	442	1.34e-45	156
MsG0280009646.01.T01	AT5G25040	60.630	127	50	0	21	147	341	467	1.55e-45	156
MsG0280009646.01.T01	AT1G79710	59.055	127	52	0	21	147	322	448	5.96e-44	152
MsG0280009646.01.T01	AT1G79710	59.055	127	52	0	21	147	322	448	5.96e-44	152
MsG0280009646.01.T01	AT5G10820	54.610	141	62	1	16	156	328	466	6.57e-41	144
MsG0280009646.01.T01	AT5G25040	61.818	110	42	0	21	130	316	425	7.16e-37	132
MsG0280009646.01.T01	AT1G79710	53.247	77	36	0	21	97	322	398	4.32e-20	86.3
MsG0280009646.01.T01	AT5G25040	56.250	64	28	0	21	84	316	379	5.11e-16	74.7
MsG0280009646.01.T01	AT5G54860	31.250	128	88	0	16	143	339	466	1.17e-14	71.2
MsG0280009646.01.T01	AT1G04570	34.884	129	82	2	19	146	356	483	4.12e-13	66.6
MsG0280009646.01.T01	AT1G04570	34.884	129	82	2	19	146	208	335	5.07e-13	66.2
MsG0280009646.01.T01	AT2G32040	34.921	126	80	2	21	145	272	396	9.41e-13	65.5
MsG0280009646.01.T01	AT2G32040	34.921	126	80	2	21	145	403	527	1.17e-12	65.5
MsG0280009646.01.T01	AT2G33280	33.333	129	84	2	19	146	175	302	4.75e-12	63.5
MsG0280009646.01.T01	AT2G33280	33.333	129	84	2	19	146	249	376	5.56e-12	63.2
MsG0280009646.01.T01	AT2G33280	33.333	129	84	2	19	146	357	484	6.31e-12	63.2

Find 22 sgRNAs with CRISPR-Local

Find 34 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GAACAAAGTTTGAGAATCTT+TGG	0.246673	2:-55761420	MsG0280009646.01.T01:CDS
TGGTATGTAATGCGCCTAAA+AGG	0.258930	2:+55761769	None:intergenic
CAGTTGCTCTATGGTCTATC+AGG	0.276942	2:-55761700	MsG0280009646.01.T01:CDS
CTGGAATTCTTTCATCATCA+TGG	0.371519	2:-55761480	MsG0280009646.01.T01:CDS
CTTTATCCATGTGGCATTGA+AGG	0.384331	2:-55761538	MsG0280009646.01.T01:CDS
ATGAGATTGAACCTGAAGTT+TGG	0.425035	2:-55761655	MsG0280009646.01.T01:CDS
TTTCTTCCACAGGAGAGTAT+AGG	0.435044	2:-55761822	None:intergenic
CTTTCATCATCATGGGGTGT+TGG	0.456678	2:-55761472	MsG0280009646.01.T01:CDS
ATCACAACAAAGACGTAATC+CGG	0.462520	2:+55761628	None:intergenic
AATCCGGTATACCAAACTTC+AGG	0.469780	2:+55761644	None:intergenic
TGGAATTCTTTCATCATCAT+GGG	0.479682	2:-55761479	MsG0280009646.01.T01:CDS
GAACCTGAAGTTTGGTATAC+CGG	0.479911	2:-55761647	MsG0280009646.01.T01:CDS
GGTATGTAATGCGCCTAAAA+GGG	0.490485	2:+55761770	None:intergenic
TACATACCAACACGTGCTAA+AGG	0.519509	2:-55761755	MsG0280009646.01.T01:CDS
ACAAGCATAGGCATCCACTT+TGG	0.558532	2:+55761574	None:intergenic
CGTAATCCTTTAGCACGTGT+TGG	0.560104	2:+55761749	None:intergenic
TTAATGTCGATTGATAATGC+TGG	0.562494	2:-55761499	MsG0280009646.01.T01:CDS
GGAATTCTTTCATCATCATG+GGG	0.599338	2:-55761478	MsG0280009646.01.T01:CDS
TTTGAGCTGAGTACAAGCAT+AGG	0.628993	2:+55761562	None:intergenic
AGCTCAAAGCTTTATCCATG+TGG	0.635750	2:-55761547	MsG0280009646.01.T01:CDS
AGTTGCTCTATGGTCTATCA+GGG	0.638082	2:-55761699	MsG0280009646.01.T01:CDS
AATGTTCCTTCAATGCCACA+TGG	0.644480	2:+55761532	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AGTATATTTTAAATGTGGTT+TGG	-	Chr2:55761773-55761792	MsG0280009646.01.T01:CDS	20.0%
!!!	ATGACAGTATATTTTAAATG+TGG	-	Chr2:55761768-55761787	MsG0280009646.01.T01:CDS	20.0%
!!	TAAGGTTGATTACCAAAAAA+GGG	+	Chr2:55761813-55761832	None:intergenic	25.0%
!!	TTAAGGTTGATTACCAAAAA+AGG	+	Chr2:55761814-55761833	None:intergenic	25.0%
!!!	TTTGGTTAGTGATTTTGATT+TGG	-	Chr2:55761724-55761743	MsG0280009646.01.T01:CDS	25.0%
!!!	TTTTTTGGTAATCAACCTTA+AGG	-	Chr2:55761813-55761832	MsG0280009646.01.T01:CDS	25.0%
	GAACAAAGTTTGAGAATCTT+TGG	-	Chr2:55761706-55761725	MsG0280009646.01.T01:CDS	30.0%
	TGGAATTCTTTCATCATCAT+GGG	-	Chr2:55761647-55761666	MsG0280009646.01.T01:CDS	30.0%
!	ATATTTTCAATCAGCTCAGT+CGG	-	Chr2:55761331-55761350	MsG0280009646.01.T01:CDS	30.0%
!!	TTAATGTCGATTGATAATGC+TGG	-	Chr2:55761627-55761646	MsG0280009646.01.T01:CDS	30.0%
!!!	ATAGTAATCCAACCCTTTTT+TGG	-	Chr2:55761798-55761817	MsG0280009646.01.T01:CDS	30.0%
	ATCACAACAAAGACGTAATC+CGG	+	Chr2:55761501-55761520	None:intergenic	35.0%
	ATGAGATTGAACCTGAAGTT+TGG	-	Chr2:55761471-55761490	MsG0280009646.01.T01:CDS	35.0%
	CTGGAATTCTTTCATCATCA+TGG	-	Chr2:55761646-55761665	MsG0280009646.01.T01:CDS	35.0%
	GGAATTCTTTCATCATCATG+GGG	-	Chr2:55761648-55761667	MsG0280009646.01.T01:CDS	35.0%
	GTTGATTACCAAAAAAGGGT+TGG	+	Chr2:55761809-55761828	None:intergenic	35.0%
!	ATATGACTTTTAGGCCAAAG+TGG	-	Chr2:55761538-55761557	MsG0280009646.01.T01:CDS	35.0%
!	GCATAGCTCATATGACTTTT+AGG	-	Chr2:55761529-55761548	MsG0280009646.01.T01:CDS	35.0%
	AATCCGGTATACCAAACTTC+AGG	+	Chr2:55761485-55761504	None:intergenic	40.0%
	AATGTTCCTTCAATGCCACA+TGG	+	Chr2:55761597-55761616	None:intergenic	40.0%
	AGTTGCTCTATGGTCTATCA+GGG	-	Chr2:55761427-55761446	MsG0280009646.01.T01:CDS	40.0%
	GAACCTGAAGTTTGGTATAC+CGG	-	Chr2:55761479-55761498	MsG0280009646.01.T01:CDS	40.0%
	GGTATGTAATGCGCCTAAAA+GGG	+	Chr2:55761359-55761378	None:intergenic	40.0%
	TACATACCAACACGTGCTAA+AGG	-	Chr2:55761371-55761390	MsG0280009646.01.T01:CDS	40.0%
	TGGTATGTAATGCGCCTAAA+AGG	+	Chr2:55761360-55761379	None:intergenic	40.0%
	TTTGAGCTGAGTACAAGCAT+AGG	+	Chr2:55761567-55761586	None:intergenic	40.0%
!	AGCTCAAAGCTTTATCCATG+TGG	-	Chr2:55761579-55761598	MsG0280009646.01.T01:CDS	40.0%
!	CTTTATCCATGTGGCATTGA+AGG	-	Chr2:55761588-55761607	MsG0280009646.01.T01:CDS	40.0%
!	TTTTCGACTCAGTTGCTCTA+TGG	-	Chr2:55761417-55761436	MsG0280009646.01.T01:CDS	40.0%
	ACAAGCATAGGCATCCACTT+TGG	+	Chr2:55761555-55761574	None:intergenic	45.0%
	CAGTTGCTCTATGGTCTATC+AGG	-	Chr2:55761426-55761445	MsG0280009646.01.T01:CDS	45.0%
	CGTAATCCTTTAGCACGTGT+TGG	+	Chr2:55761380-55761399	None:intergenic	45.0%
	CTTTCATCATCATGGGGTGT+TGG	-	Chr2:55761654-55761673	MsG0280009646.01.T01:CDS	45.0%
!!	AGCTCAGTCGGTTCCCTTTT+AGG	-	Chr2:55761343-55761362	MsG0280009646.01.T01:CDS	50.0%

Chromosome	Type	Strat	End	Strand	Name
Chr2	gene	55761315	55761833	55761315	ID=MsG0280009646.01;Name=MsG0280009646.01
Chr2	mRNA	55761315	55761833	55761315	ID=MsG0280009646.01.T01;Parent=MsG0280009646.01;Name=MsG0280009646.01.T01;_AED=0.50;_eAED=0.50;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|172
Chr2	exon	55761315	55761833	55761315	ID=MsG0280009646.01.T01:exon:5904;Parent=MsG0280009646.01.T01
Chr2	CDS	55761315	55761833	55761315	ID=MsG0280009646.01.T01:cds;Parent=MsG0280009646.01.T01

Gene Sequence

>MsG0280009646.01.T01

GGAGAGTATAGGTTTCATATTTTCAATCAGCTCAGTCGGTTCCCTTTTAGGCGCATTACATACCAACACGTGCTAAAGGATTACGCATTCAAAGACTTACTCTTTTCGACTCAGTTGCTCTATGGTCTATCAGGGATGTTTGATCTAATTTTAGTCATGAGATTGAACCTGAAGTTTGGTATACCGGATTACGTCTTTGTTGTGATTGTCGAAAGCATAGCTCATATGACTTTTAGGCCAAAGTGGATGCCTATGCTTGTACTCAGCTCAAAGCTTTATCCATGTGGCATTGAAGGAACATTCTTTGCTCTATTAATGTCGATTGATAATGCTGGAATTCTTTCATCATCATGGGGTGTTGGATTTGTACTTCATGTACTAAAGATTACAAGAACAAAGTTTGAGAATCTTTGGTTAGTGATTTTGATTTGGAATATTTTATTTCGTATTTTAATGACAGTATATTTTAAATGTGGTTTGGATATAGTAATCCAACCCTTTTTTGGTAATCAACCTTAA

Protein sequence

>MsG0280009646.01.T01

GEYRFHIFNQLSRFPFRRITYQHVLKDYAFKDLLFSTQLLYGLSGMFDLILVMRLNLKFGIPDYVFVVIVESIAHMTFRPKWMPMLVLSSKLYPCGIEGTFFALLMSIDNAGILSSSWGVGFVLHVLKITRTKFENLWLVILIWNILFRILMTVYFKCGLDIVIQPFFGNQP*