AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0034440

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0034440 MtrunA17_Chr6g0456921 78.528 163 35 0 1 163 97 259 2.57e-80 244
Msa0034440 MtrunA17_Chr6g0456921 82.787 122 21 0 26 147 186 307 1.91e-62 198
Msa0034440 MtrunA17_Chr1g0196231 51.415 212 74 4 5 215 90 273 2.41e-57 186
Msa0034440 MtrunA17_Chr1g0196411 91.304 69 6 0 1 69 1 69 2.84e-39 130
Msa0034440 MtrunA17_Chr1g0196411 72.727 44 12 0 90 133 26 69 2.91e-14 65.9
Msa0034440 MtrunA17_Chr7g0252101 67.925 53 14 1 166 215 81 133 2.99e-16 77.4
Msa0034440 MtrunA17_Chr1g0209061 51.389 72 35 0 137 208 36 107 8.22e-16 71.2
Msa0034440 MtrunA17_Chr6g0488101 59.649 57 20 1 162 215 92 148 1.20e-15 75.9
Msa0034440 MtrunA17_Chr6g0488271 59.649 57 20 1 162 215 52 108 1.25e-15 75.5
Msa0034440 MtrunA17_Chr4g0075971 62.903 62 19 2 159 217 244 304 1.83e-15 75.5
Msa0034440 MtrunA17_Chr4g0075861 58.571 70 17 3 151 217 244 304 4.38e-15 73.6
Msa0034440 MtrunA17_Chr3g0122991 62.745 51 15 2 170 217 1 50 9.79e-15 72.0
Msa0034440 MtrunA17_Chr3g0112311 64.583 48 14 1 171 215 3 50 3.62e-13 68.2
Msa0034440 MtrunA17_Chr1g0207351 77.778 45 7 1 174 215 17 61 6.89e-13 67.4
Msa0034440 MtrunA17_Chr1g0206951 68.085 47 12 1 172 215 2 48 9.78e-13 63.5
Msa0034440 MtrunA17_Chr3g0077901 59.259 54 19 1 165 215 17 70 3.47e-12 65.5
Msa0034440 MtrunA17_Chr3g0077801 57.447 47 17 1 172 215 4 50 2.33e-11 62.8
Msa0034440 MtrunA17_Chr3g0093911 66.667 48 13 1 171 215 3 50 9.40e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 120 sgRNAs with CRISPR-Local

Find 448 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGCGTCTTCTCGGCAATTT+TGG 0.146243 1_1:+62415983 None:intergenic
TTGTGGTCTTTGTGTTAATT+AGG 0.179979 1_1:-62416230 Msa0034440:three_prime_UTR
TCATTATAGGTTCGACAATA+TGG 0.202595 1_1:-62421834 None:intergenic
CTTTCATAACCCCACCTATT+TGG 0.223203 1_1:+62416455 None:intergenic
ATTGATGTCTTTCCAACTTT+TGG 0.223627 1_1:+62420032 None:intergenic
GTTTGCAAAAGTAGCGATTT+TGG 0.224731 1_1:+62415851 None:intergenic
CTCTGATGAATTTGTCTTGT+TGG 0.230871 1_1:-62416867 Msa0034440:three_prime_UTR
GCTCTCCAATCTTACGGTTT+TGG 0.244128 1_1:+62420337 None:intergenic
TGCTTATCATACCTTGCTTT+TGG 0.245329 1_1:-62416896 Msa0034440:three_prime_UTR
AAGGAAGATAATCCGAAAAT+TGG 0.254203 1_1:-62420309 Msa0034440:CDS
CATTTCCAAAACACTAGATT+TGG 0.280825 1_1:-62417234 Msa0034440:CDS
TCTTCAAGCAATAAATCTTT+TGG 0.286453 1_1:+62417073 None:intergenic
TTTCATAACCCCACCTATTT+GGG 0.292851 1_1:+62416456 None:intergenic
TCGGGAGTTGAATGCGATTC+AGG 0.293806 1_1:-62419974 Msa0034440:CDS
GCAAAAGTGACCCCATGTTT+AGG 0.303427 1_1:+62415893 None:intergenic
ACACAATGTAATGCGAATTC+AGG 0.312578 1_1:-62416401 Msa0034440:three_prime_UTR
CCGAAAATTAGATGCAATAT+TGG 0.314170 1_1:-62420105 Msa0034440:CDS
ACGCTTCCAGCTCCTCCTTA+TGG 0.317766 1_1:-62416350 Msa0034440:three_prime_UTR
TTCCAGTTTGACATAATTCA+TGG 0.319194 1_1:+62416538 None:intergenic
ACCTTCTTTATTCTTGTAAA+CGG 0.348786 1_1:+62416958 None:intergenic
CAAAAGTGACCCCATGTTTA+GGG 0.351399 1_1:+62415894 None:intergenic
ATGCATTGAGCAACCCAAAT+AGG 0.358244 1_1:-62416469 Msa0034440:three_prime_UTR
TGGGACATGTGGCGTCTTCT+CGG 0.361574 1_1:+62415974 None:intergenic
AGGGAGGGTTGTTGACTTCA+TGG 0.367370 1_1:-62416762 Msa0034440:three_prime_UTR
AAAGTTGGAAAGACATCAAT+TGG 0.370420 1_1:-62420029 Msa0034440:CDS
TCGGGATTTGAAAGCAATTC+GGG 0.370816 1_1:-62420166 Msa0034440:CDS
ATCGTCCAAATCTAGTGTTT+TGG 0.375684 1_1:+62417229 None:intergenic
CTGGGTTACTTATTCGATAG+TGG 0.377032 1_1:-62416792 Msa0034440:three_prime_UTR
AACCATGAATTATGTCAAAC+TGG 0.381676 1_1:-62416540 Msa0034440:three_prime_UTR
GTCGGGATTTGAAAGCAATT+CGG 0.382903 1_1:-62420167 Msa0034440:CDS
TTATGTCAAACTGGAAACTT+TGG 0.388347 1_1:-62416531 Msa0034440:three_prime_UTR
CAGAGAACTGTGAACTTCCT+TGG 0.395610 1_1:-62417271 Msa0034440:CDS
TCAAGTTTCGTATAATCATA+AGG 0.404931 1_1:-62417124 Msa0034440:CDS
AAAGTTGGGAAGACATCAAT+TGG 0.408372 1_1:-62420221 Msa0034440:CDS
CATCACAGTTGACCAATCTA+AGG 0.409825 1_1:+62416627 None:intergenic
ACATCAATTGGAAAGACATC+AGG 0.418021 1_1:-62420209 Msa0034440:CDS
TGGGAAGCTCTCCAATCTTA+CGG 0.420073 1_1:+62420331 None:intergenic
GTTGTGATCTAAAGGGAAAA+AGG 0.420866 1_1:-62417306 Msa0034440:intron
GTGGATGCGGCGGATGTGTT+TGG 0.422206 1_1:+62421783 None:intergenic
GATTTATTGCTTGAAGATGA+TGG 0.424958 1_1:-62417067 Msa0034440:exon
CACAATGTAATGCGAATTCA+GGG 0.427529 1_1:-62416400 Msa0034440:three_prime_UTR
ACATCAATTGGAAAGACATA+AGG 0.428491 1_1:-62420017 Msa0034440:CDS
TTTCCGGTGTGTGCAAGAAT+TGG 0.429441 1_1:-62417196 Msa0034440:CDS
ATCAATCTCAAAATTGCGGC+TGG 0.429601 1_1:-62416811 Msa0034440:three_prime_UTR
GGATTGCAAGACGAAGAAAA+TGG 0.430189 1_1:+62421804 None:intergenic
TTGGTTGGGGAAGCTAATAA+AGG 0.431759 1_1:+62417092 None:intergenic
CCGAAAATTGGATACAATAG+TGG 0.432070 1_1:-62420297 Msa0034440:CDS
TAGATTTGGACGATCTCTTT+CGG 0.435718 1_1:-62417220 Msa0034440:CDS
AGTGGTTGATTCATCGTTGA+AGG 0.440903 1_1:-62416594 Msa0034440:three_prime_UTR
AAAAGTAAACAAACTACTAA+TGG 0.446617 1_1:+62416115 None:intergenic
TATGTCAAACTGGAAACTTT+GGG 0.457586 1_1:-62416530 Msa0034440:three_prime_UTR
CCCTCTTAGATGCCAAAAGT+TGG 0.462581 1_1:-62420044 Msa0034440:CDS
CCCCGCCATGATAAAATAAC+CGG 0.472474 1_1:+62417008 None:intergenic
AGAGAACTGTGAACTTCCTT+GGG 0.473513 1_1:-62417270 Msa0034440:CDS
ATAATCAATCTACAGGATAA+TGG 0.480057 1_1:-62420394 Msa0034440:intron
CAGATTCTCACATGTTGGAT+TGG 0.480976 1_1:-62416325 Msa0034440:three_prime_UTR
CTGAAACTTGTTGAGAGAAG+TGG 0.482100 1_1:+62421764 None:intergenic
CAATGTCCGATACCTTAGAT+TGG 0.485698 1_1:-62416639 Msa0034440:three_prime_UTR
TGGAACAGATTCTCACATGT+TGG 0.490431 1_1:-62416330 Msa0034440:three_prime_UTR
TCTGTTCCATAAGGAGGAGC+TGG 0.496455 1_1:+62416344 None:intergenic
CAATCTAAGGTATCGGACAT+TGG 0.496651 1_1:+62416640 None:intergenic
GTGTCCCAAAACCGTAAGAT+TGG 0.496680 1_1:-62420342 Msa0034440:CDS
AATCTAAGGTATCGGACATT+GGG 0.497042 1_1:+62416641 None:intergenic
TACGAAACTTGAAGAAGTAA+TGG 0.497781 1_1:+62417135 None:intergenic
TGGGACACCGCATTGTTAGT+TGG 0.503360 1_1:+62420357 None:intergenic
TCCGTTTACAAGAATAAAGA+AGG 0.504680 1_1:-62416959 Msa0034440:three_prime_UTR
ATCTATGTTACGTCTTCTAC+CGG 0.506380 1_1:-62417027 Msa0034440:three_prime_UTR
TATTCGATAGTGGGAAAACC+AGG 0.509346 1_1:-62416782 Msa0034440:three_prime_UTR
GCTACCTTCTTGCTTCTCCA+AGG 0.510360 1_1:-62421692 Msa0034440:intron
CATCAATTGGAAAGACATAA+GGG 0.511174 1_1:-62420016 Msa0034440:CDS
GAGTCAGATGGCAAAAGAAA+AGG 0.513017 1_1:-62419901 Msa0034440:intron
ATGCGATTCAGGACAAGGCC+AGG 0.522988 1_1:-62419963 Msa0034440:CDS
CGGTGTGTGCAAGAATTGGA+TGG 0.528983 1_1:-62417192 Msa0034440:CDS
TTTGAAAGCAATTCGGGACA+AGG 0.529966 1_1:-62420160 Msa0034440:CDS
ATGTGAGAATCTGTTCCATA+AGG 0.530374 1_1:+62416335 None:intergenic
TCACTGACAAGGCCAACATA+GGG 0.530818 1_1:-62416715 Msa0034440:three_prime_UTR
TGGGTTACTTATTCGATAGT+GGG 0.544109 1_1:-62416791 Msa0034440:three_prime_UTR
AGAGCATATTTCCCTAAACA+TGG 0.551374 1_1:-62415905 Msa0034440:three_prime_UTR
GTTGAATGCGATTCAGGACA+AGG 0.552499 1_1:-62419968 Msa0034440:CDS
GTCACTGACAAGGCCAACAT+AGG 0.554026 1_1:-62416716 Msa0034440:three_prime_UTR
ATGAAGTCAACAACCCTCCC+TGG 0.555611 1_1:+62416764 None:intergenic
GTCTATCAATCTCAAAATTG+CGG 0.565762 1_1:-62416815 Msa0034440:three_prime_UTR
AAGCAATTCGGGACAAGGCA+AGG 0.568591 1_1:-62420155 Msa0034440:CDS
CAAGCTAAGTACCCCTATGT+TGG 0.578655 1_1:+62416703 None:intergenic
AGTTGACCAATCTAAGGTAT+CGG 0.584480 1_1:+62416633 None:intergenic
AAAGAGTTCATCGAGTCAGA+TGG 0.590519 1_1:-62419913 Msa0034440:CDS
CATTGAGCAACCCAAATAGG+TGG 0.592083 1_1:-62416466 Msa0034440:three_prime_UTR
GAGCATATTTCCCTAAACAT+GGG 0.592327 1_1:-62415904 Msa0034440:three_prime_UTR
GATACAATAGTGGTAAGCAT+TGG 0.593656 1_1:-62420287 Msa0034440:CDS
CGAACCTTGGAGAAGCAAGA+AGG 0.593852 1_1:+62421688 None:intergenic
ACGTAACATAGATAGAGTGA+AGG 0.598147 1_1:+62417037 None:intergenic
ATGATATCAAGTACATCCCA+AGG 0.602057 1_1:+62417254 None:intergenic
CTTGTTGAGAGAAGTGGATG+CGG 0.602316 1_1:+62421770 None:intergenic
ACATTGTGTATACAGACGAC+TGG 0.602832 1_1:+62416415 None:intergenic
CACAAAGACCACAAGTAACA+CGG 0.602989 1_1:+62416239 None:intergenic
TCAATCTCAAAATTGCGGCT+GGG 0.603818 1_1:-62416810 Msa0034440:three_prime_UTR
ATTCATCGTTGAAGGAAACA+AGG 0.604415 1_1:-62416586 Msa0034440:three_prime_UTR
ATTGAGCAACCCAAATAGGT+GGG 0.606302 1_1:-62416465 Msa0034440:three_prime_UTR
CAGAGCATTTGCCAAAAGCA+AGG 0.610193 1_1:+62416885 None:intergenic
TATTGGTAAGCCATGGTCAG+AGG 0.622917 1_1:-62420088 Msa0034440:CDS
TGAGAATCTGTTCCATAAGG+AGG 0.623582 1_1:+62416338 None:intergenic
GATGCAATATTGGTAAGCCA+TGG 0.625611 1_1:-62420095 Msa0034440:CDS
CATCAATTGGAAAGACATCA+GGG 0.628383 1_1:-62420208 Msa0034440:CDS
GTTGTACACCGTGTTACTTG+TGG 0.643120 1_1:-62416247 Msa0034440:three_prime_UTR
GATAGTGGGAAAACCAGGGA+GGG 0.643788 1_1:-62416777 Msa0034440:three_prime_UTR
AGCATATTTCCCTAAACATG+GGG 0.646217 1_1:-62415903 Msa0034440:three_prime_UTR
CATCCAATTCTTGCACACAC+CGG 0.649856 1_1:+62417193 None:intergenic
CACTGACAAGGCCAACATAG+GGG 0.657764 1_1:-62416714 Msa0034440:three_prime_UTR
TAAGATTGGAGAGCTTCCCA+AGG 0.665492 1_1:-62420328 Msa0034440:CDS
AATATATGTTGTCACTGACA+AGG 0.670333 1_1:-62416726 Msa0034440:three_prime_UTR
GAAGGTAGCGAAGTGAAGTG+AGG 0.671029 1_1:+62421706 None:intergenic
ATCAATCTACAGGATAATGG+CGG 0.678202 1_1:-62420391 Msa0034440:intron
ATTCGATAGTGGGAAAACCA+GGG 0.695416 1_1:-62416781 Msa0034440:three_prime_UTR
TTGAGCAACCCAAATAGGTG+GGG 0.700451 1_1:-62416464 Msa0034440:three_prime_UTR
CGATAGTGGGAAAACCAGGG+AGG 0.702324 1_1:-62416778 Msa0034440:three_prime_UTR
TGTATCAGAAGTGTATGTGT+TGG 0.712369 1_1:-62416138 Msa0034440:three_prime_UTR
GTTGAGAGAAGTGGATGCGG+CGG 0.719691 1_1:+62421773 None:intergenic
ACAATGTAATGCGAATTCAG+GGG 0.731351 1_1:-62416399 Msa0034440:three_prime_UTR
TAGTGATCCAACTAACAATG+CGG 0.734704 1_1:-62420364 Msa0034440:CDS
AAATATCAGAAAATGCACTG+TGG 0.737807 1_1:-62415777 Msa0034440:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATTTATTTATTTATTTT+AGG + chr1_1:62420235-62420254 None:intergenic 0.0%
!!! ATTTATTATGTTTTTTGTTT+TGG - chr1_1:62416815-62416834 Msa0034440:three_prime_UTR 10.0%
!!! TACTTTTCATTTTTAAATTA+CGG - chr1_1:62418772-62418791 Msa0034440:intron 10.0%
!!! AAAAATTATATGTATTGATA+TGG + chr1_1:62419414-62419433 None:intergenic 10.0%
!! TTAATAGGATTATAATATAT+AGG - chr1_1:62419564-62419583 Msa0034440:intron 10.0%
!! TTTGTCAAAAAAAAAAAAAA+AGG - chr1_1:62419851-62419870 Msa0034440:intron 10.0%
!!! TTTTCTGATATTTATTTTAT+CGG + chr1_1:62421815-62421834 None:intergenic 10.0%
!! TAACTAAAAAATTGTATTTG+GGG + chr1_1:62416212-62416231 None:intergenic 15.0%
!! GTAACTAAAAAATTGTATTT+GGG + chr1_1:62416213-62416232 None:intergenic 15.0%
!! AGTAACTAAAAAATTGTATT+TGG + chr1_1:62416214-62416233 None:intergenic 15.0%
!! AAAAAAAAAAAAAAAAGCAG+TGG - chr1_1:62416587-62416606 Msa0034440:three_prime_UTR 15.0%
!!! TCTTTCTAATACTTTTTTTT+TGG - chr1_1:62416889-62416908 Msa0034440:three_prime_UTR 15.0%
!!! TGTTACAAGTTTTATATTTT+TGG - chr1_1:62418156-62418175 Msa0034440:intron 15.0%
!! GAATCTTTAATTAACAATTA+AGG - chr1_1:62418574-62418593 Msa0034440:intron 15.0%
!! AGAATCTCTTATATATTTAT+GGG - chr1_1:62418648-62418667 Msa0034440:intron 15.0%
!!! AACCTTTAAAAAAAAACTTA+GGG - chr1_1:62418705-62418724 Msa0034440:intron 15.0%
!!! TAGTTTTCTTTTTTAAACTA+CGG + chr1_1:62418900-62418919 None:intergenic 15.0%
!! AAATTGTTATCAAACAATAA+AGG - chr1_1:62418991-62419010 Msa0034440:intron 15.0%
!! CTAAAATTGTTAATTAAAGA+TGG + chr1_1:62419061-62419080 None:intergenic 15.0%
!! ATGAGATAATTGTATAATTA+AGG - chr1_1:62419480-62419499 Msa0034440:intron 15.0%
!!! TTGTTTATTTGATAATATCA+TGG + chr1_1:62420196-62420215 None:intergenic 15.0%
!!! TTTTGCTGTTTTTTATTTTT+AGG - chr1_1:62421503-62421522 Msa0034440:intron 15.0%
!!! TTTTGCCATTTTTTTTAAAA+GGG - chr1_1:62421723-62421742 Msa0034440:five_prime_UTR 15.0%
!! TTATCGGTAAAAAAAAAAAA+AGG + chr1_1:62421799-62421818 None:intergenic 15.0%
!! TACATTTCTGATATGAATTT+AGG - chr1_1:62415963-62415982 Msa0034440:three_prime_UTR 20.0%
!!! AAATTTGATGTAGGTTTTTT+AGG - chr1_1:62415992-62416011 Msa0034440:three_prime_UTR 20.0%
!!! AATTTGATGTAGGTTTTTTA+GGG - chr1_1:62415993-62416012 Msa0034440:three_prime_UTR 20.0%
!! CAAGAATACTATAACAATAT+AGG - chr1_1:62416146-62416165 Msa0034440:three_prime_UTR 20.0%
!!! TACTATAACAATATAGGTTT+TGG - chr1_1:62416152-62416171 Msa0034440:three_prime_UTR 20.0%
!!! TTTTTTAGTTACTCTAGATT+AGG - chr1_1:62416221-62416240 Msa0034440:three_prime_UTR 20.0%
!! TTATTGGATGAAAATAATGT+GGG - chr1_1:62416940-62416959 Msa0034440:three_prime_UTR 20.0%
!!! AAGTTTTATATTTATCACTG+TGG - chr1_1:62417891-62417910 Msa0034440:intron 20.0%
!!! ATACAAGTTTTACATTTTTC+AGG - chr1_1:62418025-62418044 Msa0034440:intron 20.0%
!! GAGAATCTCTTATATATTTA+TGG - chr1_1:62418647-62418666 Msa0034440:intron 20.0%
!!! CAACCTTTAAAAAAAAACTT+AGG - chr1_1:62418704-62418723 Msa0034440:intron 20.0%
!! GTAGAAATTAATAACCTTAA+GGG + chr1_1:62418967-62418986 None:intergenic 20.0%
!!! ATTGTTTGATAACAATTTGA+AGG + chr1_1:62418989-62419008 None:intergenic 20.0%
!! AATGCGTATAAATTATAAAG+TGG - chr1_1:62419445-62419464 Msa0034440:intron 20.0%
!!! AAGAATTATGATTTTAAGGA+AGG - chr1_1:62419528-62419547 Msa0034440:intron 20.0%
!! AGGATTATAATATATAGGAT+AGG - chr1_1:62419569-62419588 Msa0034440:intron 20.0%
!! TATAATATATAGGATAGGAT+AGG - chr1_1:62419574-62419593 Msa0034440:intron 20.0%
!!! AAATGGTTATAAGTTTTACA+TGG - chr1_1:62419767-62419786 Msa0034440:intron 20.0%
!! AAAAAAAAAAAAAGGCTTAG+AGG - chr1_1:62419859-62419878 Msa0034440:intron 20.0%
!!! TTTTTTCCGAAGTAAAAATT+AGG - chr1_1:62420044-62420063 Msa0034440:CDS 20.0%
!!! TTTTTCCGAAGTAAAAATTA+GGG - chr1_1:62420045-62420064 Msa0034440:CDS 20.0%
!!! ATTAACCCTAATTTTTACTT+CGG + chr1_1:62420053-62420072 None:intergenic 20.0%
!! TATAATATACCAATTGAAGA+TGG - chr1_1:62420131-62420150 Msa0034440:CDS 20.0%
!! ATAATATACCAATTGAAGAT+GGG - chr1_1:62420132-62420151 Msa0034440:CDS 20.0%
!!! TTGATAATATCATGGAATAT+GGG + chr1_1:62420188-62420207 None:intergenic 20.0%
!!! TTTGATAATATCATGGAATA+TGG + chr1_1:62420189-62420208 None:intergenic 20.0%
!!! TTTTTATTGGAGAAATTTAC+TGG - chr1_1:62420431-62420450 Msa0034440:intron 20.0%
!! AAAAGTAAACAAACTACTAA+TGG + chr1_1:62421487-62421506 None:intergenic 20.0%
!!! TTGCTTCTTTTTTTTTGTTA+GGG + chr1_1:62421579-62421598 None:intergenic 20.0%
!!! ATTGCTTCTTTTTTTTTGTT+AGG + chr1_1:62421580-62421599 None:intergenic 20.0%
!!! CTTTTGCCATTTTTTTTAAA+AGG - chr1_1:62421722-62421741 Msa0034440:five_prime_UTR 20.0%
!!! TTTGCCATTTTTTTTAAAAG+GGG - chr1_1:62421724-62421743 Msa0034440:five_prime_UTR 20.0%
! AGGTTTATCAAATTTGATGT+AGG - chr1_1:62415983-62416002 Msa0034440:three_prime_UTR 25.0%
! AATGCTTGGAAAAAAAAAGA+AGG - chr1_1:62416365-62416384 Msa0034440:three_prime_UTR 25.0%
!!! ATCAATTGCTAGGTTTTTTT+AGG - chr1_1:62416522-62416541 Msa0034440:three_prime_UTR 25.0%
! ATAAGATATTGTTCCTATTG+TGG + chr1_1:62416626-62416645 None:intergenic 25.0%
! CTTATTGGATGAAAATAATG+TGG - chr1_1:62416939-62416958 Msa0034440:three_prime_UTR 25.0%
! TTTGAAAATGAGTCCATAAA+TGG + chr1_1:62416971-62416990 None:intergenic 25.0%
! TTATTGTGTGAAATCAAAGT+GGG + chr1_1:62417002-62417021 None:intergenic 25.0%
! TTTATTGTGTGAAATCAAAG+TGG + chr1_1:62417003-62417022 None:intergenic 25.0%
! ATAATCAATCTACAGGATAA+TGG - chr1_1:62417205-62417224 Msa0034440:CDS 25.0%
! CTTCTTAGATACAAAAAGTT+GGG - chr1_1:62417364-62417383 Msa0034440:intron 25.0%
! ATGAAGAAAAATTGTTTGGT+CGG - chr1_1:62417414-62417433 Msa0034440:intron 25.0%
!! CCAATATTGCATCTAATTTT+CGG + chr1_1:62417497-62417516 None:intergenic 25.0%
!!! TTCCTTTTTAAAAAACTTCC+TGG + chr1_1:62417657-62417676 None:intergenic 25.0%
! ACCTTTCATTATCTAAAAGT+AGG - chr1_1:62417752-62417771 Msa0034440:intron 25.0%
! TAGTATCATGTATCAAACAA+TGG + chr1_1:62417854-62417873 None:intergenic 25.0%
!! TACATGATACTAGTGAATTT+TGG - chr1_1:62417862-62417881 Msa0034440:intron 25.0%
!!! ATGTTTGTTGAATTTTGAGT+AGG - chr1_1:62417917-62417936 Msa0034440:intron 25.0%
!!! TTACATTTTTCAGGATATGT+CGG - chr1_1:62418034-62418053 Msa0034440:intron 25.0%
!! TACATGATACTAGTGAATTT+TGG - chr1_1:62417862-62417881 Msa0034440:intron 25.0%
! TAAATGATGTATGATGTATG+TGG - chr1_1:62418377-62418396 Msa0034440:intron 25.0%
! CATTCAATAAATGATGTATG+TGG + chr1_1:62418370-62418389 None:intergenic 25.0%
! TTAAGGTTATCAAACAATTG+AGG - chr1_1:62418591-62418610 Msa0034440:intron 25.0%
! ATCTCTTATATATTTATGGG+AGG - chr1_1:62418651-62418670 Msa0034440:intron 25.0%
!!! CACCCTAAGTTTTTTTTTAA+AGG + chr1_1:62418710-62418729 None:intergenic 25.0%
! GGTAGAAATTAATAACCTTA+AGG + chr1_1:62418968-62418987 None:intergenic 25.0%
! TTGTTATCAAACAATAAAGG+TGG - chr1_1:62418994-62419013 Msa0034440:intron 25.0%
! TTATCAAACAATTCATGTCA+CGG + chr1_1:62419022-62419041 None:intergenic 25.0%
! GGTAATTGATCATAACTATT+AGG + chr1_1:62419096-62419115 None:intergenic 25.0%
! TACCTTAACAGAAAAGAAAA+TGG - chr1_1:62419112-62419131 Msa0034440:intron 25.0%
! TTTCAGTTCATTCATTTCAT+TGG - chr1_1:62419274-62419293 Msa0034440:intron 25.0%
! TTCAGTTCATTCATTTCATT+GGG - chr1_1:62419275-62419294 Msa0034440:intron 25.0%
! TTGTTAAACACAATTGAAAG+TGG - chr1_1:62419362-62419381 Msa0034440:intron 25.0%
! AATTGAAAGTGGAATATTCA+TGG - chr1_1:62419373-62419392 Msa0034440:intron 25.0%
! ATTGAAAGTGGAATATTCAT+GGG - chr1_1:62419374-62419393 Msa0034440:intron 25.0%
!! GGGAAAGAATTATGATTTTA+AGG - chr1_1:62419524-62419543 Msa0034440:intron 25.0%
!!! TGATTTTAAGGAAGGAATAT+CGG - chr1_1:62419536-62419555 Msa0034440:intron 25.0%
!! ATCAACTGTTATTTACATGT+TGG - chr1_1:62419795-62419814 Msa0034440:intron 25.0%
! TTAGACATCATAAACATTAG+TGG - chr1_1:62419948-62419967 Msa0034440:CDS 25.0%
! TAGGGTTAATTAATGCAATT+AGG - chr1_1:62420063-62420082 Msa0034440:CDS 25.0%
! AGGGTTAATTAATGCAATTA+GGG - chr1_1:62420064-62420083 Msa0034440:CDS 25.0%
! TGATAATATCATGGAATATG+GGG + chr1_1:62420187-62420206 None:intergenic 25.0%
! TTCTATTGTTGTGATCTAAA+GGG - chr1_1:62420286-62420305 Msa0034440:CDS 25.0%
! TCAAGTTTCGTATAATCATA+AGG - chr1_1:62420475-62420494 Msa0034440:intron 25.0%
!!! AAGCAATAAATCTTTTGGTT+GGG + chr1_1:62420524-62420543 None:intergenic 25.0%
!! TCTTCAAGCAATAAATCTTT+TGG + chr1_1:62420529-62420548 None:intergenic 25.0%
! ACCTTCTTTATTCTTGTAAA+CGG + chr1_1:62420644-62420663 None:intergenic 25.0%
!! TTTTAGACATCTACAATATG+AGG - chr1_1:62421299-62421318 Msa0034440:intron 25.0%
!!! TCGCAACTTTTTAAAAGTTA+AGG + chr1_1:62421548-62421567 None:intergenic 25.0%
!!! CTTTTAAAAAGTTGCGATTT+TGG - chr1_1:62421551-62421570 Msa0034440:intron 25.0%
!!! TGCTTCTTTTTTTTTGTTAG+GGG + chr1_1:62421578-62421597 None:intergenic 25.0%
! TTTACAAAAAGTTGCGATTA+TGG + chr1_1:62421660-62421679 None:intergenic 25.0%
!! GCAACTTTTTGTAAAGATAA+GGG - chr1_1:62421665-62421684 Msa0034440:intron 25.0%
!! CAACTTTTTGTAAAGATAAG+GGG - chr1_1:62421666-62421685 Msa0034440:intron 25.0%
!!! TTGCCATTTTTTTTAAAAGG+GGG - chr1_1:62421725-62421744 Msa0034440:five_prime_UTR 25.0%
AAACTCACAGACAAAGTTTA+GGG + chr1_1:62416066-62416085 None:intergenic 30.0%
! ATTGTATTTGGGGATGATTT+TGG + chr1_1:62416202-62416221 None:intergenic 30.0%
TTAGTATTTGTTTGCGAGTT+TGG + chr1_1:62416315-62416334 None:intergenic 30.0%
!! TAAGATTTTGTTTGCGAGTT+TGG - chr1_1:62416332-62416351 Msa0034440:three_prime_UTR 30.0%
TGGAAAAAATAGAGGAAAGT+GGG - chr1_1:62416398-62416417 Msa0034440:three_prime_UTR 30.0%
AGAACAATCTACACTTCAAA+AGG - chr1_1:62416655-62416674 Msa0034440:three_prime_UTR 30.0%
AATCACAATAGAGAAATGCT+AGG + chr1_1:62417052-62417071 None:intergenic 30.0%
GTAGATTGATTATGCACAAT+AGG + chr1_1:62417198-62417217 None:intergenic 30.0%
ATTGTGCATAATCAATCTAC+AGG - chr1_1:62417198-62417217 Msa0034440:CDS 30.0%
! ATTTTCGGATTATCTTCCTT+GGG + chr1_1:62417290-62417309 None:intergenic 30.0%
! AATTTTCGGATTATCTTCCT+TGG + chr1_1:62417291-62417310 None:intergenic 30.0%
AAGGAAGATAATCCGAAAAT+TGG - chr1_1:62417290-62417309 Msa0034440:CDS 30.0%
! CCACTATTGTATCCAATTTT+CGG + chr1_1:62417305-62417324 None:intergenic 30.0%
! CCAACTTTTTGTATCTAAGA+AGG + chr1_1:62417366-62417385 None:intergenic 30.0%
CCTTCTTAGATACAAAAAGT+TGG - chr1_1:62417363-62417382 Msa0034440:intron 30.0%
AGGGATGAAGAAAAATTGTT+TGG - chr1_1:62417410-62417429 Msa0034440:intron 30.0%
TGAAGAAAAATTGTTTGGTC+GGG - chr1_1:62417415-62417434 Msa0034440:intron 30.0%
!! GGCAAGGAAACTTTTTAAAA+AGG - chr1_1:62417460-62417479 Msa0034440:intron 30.0%
CCGAAAATTAGATGCAATAT+TGG - chr1_1:62417494-62417513 Msa0034440:intron 30.0%
! ATTGATGTCTTTCCAACTTT+TGG + chr1_1:62417570-62417589 None:intergenic 30.0%
AAAGTTGGAAAGACATCAAT+TGG - chr1_1:62417570-62417589 Msa0034440:intron 30.0%
ACATCAATTGGAAAGACATA+AGG - chr1_1:62417582-62417601 Msa0034440:intron 30.0%
CATCAATTGGAAAGACATAA+GGG - chr1_1:62417583-62417602 Msa0034440:intron 30.0%
ATGAAGAAAAACTGTTTGGT+CGG - chr1_1:62417606-62417625 Msa0034440:intron 30.0%
!! GCCTACTTTTAGATAATGAA+AGG + chr1_1:62417756-62417775 None:intergenic 30.0%
!! ATGTCGGTTGAATTTTAAGT+AGG - chr1_1:62418050-62418069 Msa0034440:intron 30.0%
CATAACAAATTGAAAACCAC+AGG + chr1_1:62418078-62418097 None:intergenic 30.0%
! TGTATATGTCTGTTGAGTTT+TGG - chr1_1:62418183-62418202 Msa0034440:intron 30.0%
! AAGTTTCTTACATTTGAGAC+CGG + chr1_1:62418335-62418354 None:intergenic 30.0%
AAGTTTCTTACATTTGACAC+CGG - chr1_1:62418451-62418470 Msa0034440:intron 30.0%
AATACTCAATTGTTGAGTCA+CGG + chr1_1:62418621-62418640 None:intergenic 30.0%
AAAAAAACTTAGGGTGTGTT+TGG - chr1_1:62418714-62418733 Msa0034440:intron 30.0%
TATCAAACAATTCATGTCAC+GGG + chr1_1:62419021-62419040 None:intergenic 30.0%
TCATAACTATTAGGACAAGT+AGG + chr1_1:62419087-62419106 None:intergenic 30.0%
! CTCCATTTTCTTTTCTGTTA+AGG + chr1_1:62419117-62419136 None:intergenic 30.0%
!!! GTGAATTGTTTCTTGTTTTG+AGG - chr1_1:62419301-62419320 Msa0034440:intron 30.0%
!!! TTGTTTTGAGGCATTTATTG+AGG - chr1_1:62419313-62419332 Msa0034440:intron 30.0%
AGGACACAATACAATGAAAA+TGG - chr1_1:62419333-62419352 Msa0034440:intron 30.0%
GGACACAATACAATGAAAAT+GGG - chr1_1:62419334-62419353 Msa0034440:intron 30.0%
TAATTAAGGACCCACTAATT+TGG - chr1_1:62419494-62419513 Msa0034440:intron 30.0%
!!! TGTGCTATTTTTCTCTCTTT+GGG + chr1_1:62419677-62419696 None:intergenic 30.0%
!!! ATGTGCTATTTTTCTCTCTT+TGG + chr1_1:62419678-62419697 None:intergenic 30.0%
! TGGGGTATTTATGTGTTAAA+TGG - chr1_1:62419750-62419769 Msa0034440:intron 30.0%
CTGCATATTAAGTAGCTTAA+TGG - chr1_1:62419828-62419847 Msa0034440:intron 30.0%
TATAAAGACTTCGCTTTCAT+TGG - chr1_1:62419902-62419921 Msa0034440:CDS 30.0%
GCTTTCATTGGATATTTACA+TGG - chr1_1:62419914-62419933 Msa0034440:CDS 30.0%
GTTCTATTGTTGTGATCTAA+AGG - chr1_1:62420285-62420304 Msa0034440:CDS 30.0%
CATTTCCAAAACACTAGATT+TGG - chr1_1:62420365-62420384 Msa0034440:CDS 30.0%
! AGAATTGGATGGCTTTTTAT+TGG - chr1_1:62420418-62420437 Msa0034440:intron 30.0%
TACGAAACTTGAAGAAGTAA+TGG + chr1_1:62420467-62420486 None:intergenic 30.0%
!! AGCAATAAATCTTTTGGTTG+GGG + chr1_1:62420523-62420542 None:intergenic 30.0%
! CAAGCAATAAATCTTTTGGT+TGG + chr1_1:62420525-62420544 None:intergenic 30.0%
GATTTATTGCTTGAAGATGA+TGG - chr1_1:62420532-62420551 Msa0034440:intron 30.0%
!! TTCTACCGGTTATTTTATCA+TGG - chr1_1:62420586-62420605 Msa0034440:intron 30.0%
TCCGTTTACAAGAATAAAGA+AGG - chr1_1:62420640-62420659 Msa0034440:intron 30.0%
!!! TGGTTTTATGCAAAAGTTCT+AGG - chr1_1:62420752-62420771 Msa0034440:intron 30.0%
GTCTATCAATCTCAAAATTG+CGG - chr1_1:62420784-62420803 Msa0034440:intron 30.0%
AATATATGTTGTCACTGACA+AGG - chr1_1:62420873-62420892 Msa0034440:intron 30.0%
AACCATGAATTATGTCAAAC+TGG - chr1_1:62421059-62421078 Msa0034440:intron 30.0%
TTCCAGTTTGACATAATTCA+TGG + chr1_1:62421064-62421083 None:intergenic 30.0%
TTATGTCAAACTGGAAACTT+TGG - chr1_1:62421068-62421087 Msa0034440:intron 30.0%
TATGTCAAACTGGAAACTTT+GGG - chr1_1:62421069-62421088 Msa0034440:intron 30.0%
TTGTGGTCTTTGTGTTAATT+AGG - chr1_1:62421369-62421388 Msa0034440:intron 30.0%
!!! GCTTCTTTTTTTTTGTTAGG+GGG + chr1_1:62421577-62421596 None:intergenic 30.0%
! CGCAACTTTTTGTAAAGATA+AGG - chr1_1:62421664-62421683 Msa0034440:intron 30.0%
! CAGACAAAGTTTAGGGTTTA+AGG + chr1_1:62416059-62416078 None:intergenic 35.0%
CAAACTCACAGACAAAGTTT+AGG + chr1_1:62416067-62416086 None:intergenic 35.0%
!! GTTTTGGATTTGTAGAACTC+AGG - chr1_1:62416168-62416187 Msa0034440:three_prime_UTR 35.0%
! TATTTGGGGATGATTTTGGA+GGG + chr1_1:62416198-62416217 None:intergenic 35.0%
TATTTGTTTGCGAGTTTGGA+GGG + chr1_1:62416311-62416330 None:intergenic 35.0%
!! ATTTTGTTTGCGAGTTTGGA+AGG - chr1_1:62416336-62416355 Msa0034440:three_prime_UTR 35.0%
!! TTTTGTTTGCGAGTTTGGAA+GGG - chr1_1:62416337-62416356 Msa0034440:three_prime_UTR 35.0%
AAAAAGAAGGAATGAGCAAG+TGG - chr1_1:62416378-62416397 Msa0034440:three_prime_UTR 35.0%
TGAGCAAGTGGAAAAAATAG+AGG - chr1_1:62416390-62416409 Msa0034440:three_prime_UTR 35.0%
GTGGAAAAAATAGAGGAAAG+TGG - chr1_1:62416397-62416416 Msa0034440:three_prime_UTR 35.0%
AAAAATAGAGGAAAGTGGGA+TGG - chr1_1:62416402-62416421 Msa0034440:three_prime_UTR 35.0%
AAAATAGAGGAAAGTGGGAT+GGG - chr1_1:62416403-62416422 Msa0034440:three_prime_UTR 35.0%
AGAAACAATTCCACCACAAT+AGG - chr1_1:62416610-62416629 Msa0034440:three_prime_UTR 35.0%
AGATATTGTTCCTATTGTGG+TGG + chr1_1:62416623-62416642 None:intergenic 35.0%
TCTAGTACTCACTCTCTTAT+TGG - chr1_1:62416924-62416943 Msa0034440:three_prime_UTR 35.0%
AATGTGGGTTTGACCATTTA+TGG - chr1_1:62416955-62416974 Msa0034440:three_prime_UTR 35.0%
! ATCAATCTACAGGATAATGG+CGG - chr1_1:62417208-62417227 Msa0034440:CDS 35.0%
TAGTGATCCAACTAACAATG+CGG - chr1_1:62417235-62417254 Msa0034440:CDS 35.0%
CCGAAAATTGGATACAATAG+TGG - chr1_1:62417302-62417321 Msa0034440:intron 35.0%
GATACAATAGTGGTAAGCAT+TGG - chr1_1:62417312-62417331 Msa0034440:intron 35.0%
AAAGTTGGGAAGACATCAAT+TGG - chr1_1:62417378-62417397 Msa0034440:intron 35.0%
ACATCAATTGGAAAGACATC+AGG - chr1_1:62417390-62417409 Msa0034440:intron 35.0%
CATCAATTGGAAAGACATCA+GGG - chr1_1:62417391-62417410 Msa0034440:intron 35.0%
AGGGATGAAGAAAAACTGTT+TGG - chr1_1:62417602-62417621 Msa0034440:intron 35.0%
TGAAGAAAAACTGTTTGGTC+GGG - chr1_1:62417607-62417626 Msa0034440:intron 35.0%
!!! GGCCAGGAAGTTTTTTAAAA+AGG - chr1_1:62417652-62417671 Msa0034440:intron 35.0%
AGATGGCAAAAGAAAAGGTA+AGG - chr1_1:62417703-62417722 Msa0034440:intron 35.0%
! CATAACAAACTGAGAAGCAT+AGG + chr1_1:62417945-62417964 None:intergenic 35.0%
! TTTTACCTCTAGTTGTGCAA+GGG - chr1_1:62417965-62417984 Msa0034440:intron 35.0%
!! GAATTTTAAGTAGGATCCTG+TGG - chr1_1:62418059-62418078 Msa0034440:intron 35.0%
ACTGCAAAGTTTATGTTGAC+TGG - chr1_1:62418210-62418229 Msa0034440:intron 35.0%
TCATTACAATATACTCCCTC+CGG - chr1_1:62418313-62418332 Msa0034440:intron 35.0%
AGGTTATCAAACAATTGAGG+TGG - chr1_1:62418594-62418613 Msa0034440:intron 35.0%
! AATAACCTTAAGGGTGTGTT+TGG + chr1_1:62418958-62418977 None:intergenic 35.0%
GAGATAGAAAGATGAGAAAG+AGG - chr1_1:62419134-62419153 Msa0034440:intron 35.0%
ATAGAAAGATGAGAAAGAGG+TGG - chr1_1:62419137-62419156 Msa0034440:intron 35.0%
AGAAAGAGGTGGAAGAAAAA+TGG - chr1_1:62419148-62419167 Msa0034440:intron 35.0%
AGACCGATTGAAACATTAGT+GGG - chr1_1:62419228-62419247 Msa0034440:intron 35.0%
ATTCATGGGAAAACAAAGTC+TGG - chr1_1:62419388-62419407 Msa0034440:intron 35.0%
! ACCCACTAATTTGGTTTATG+AGG - chr1_1:62419503-62419522 Msa0034440:intron 35.0%
CCCTCATAAACCAAATTAGT+GGG + chr1_1:62419507-62419526 None:intergenic 35.0%
! CCCACTAATTTGGTTTATGA+GGG - chr1_1:62419504-62419523 Msa0034440:intron 35.0%
TCCCTCATAAACCAAATTAG+TGG + chr1_1:62419508-62419527 None:intergenic 35.0%
!! TTTTAAGGAAGGAATATCGG+AGG - chr1_1:62419539-62419558 Msa0034440:intron 35.0%
TTAGGGTTGCAAGACTTAAT+AGG - chr1_1:62420081-62420100 Msa0034440:CDS 35.0%
ACCAATTGAAGATGGGAAAA+TGG - chr1_1:62420139-62420158 Msa0034440:CDS 35.0%
! TCCATTTTCCCATCTTCAAT+TGG + chr1_1:62420143-62420162 None:intergenic 35.0%
CACAACAATAGAACAGTGTT+AGG + chr1_1:62420279-62420298 None:intergenic 35.0%
GTTGTGATCTAAAGGGAAAA+AGG - chr1_1:62420293-62420312 Msa0034440:CDS 35.0%
ATGATATCAAGTACATCCCA+AGG + chr1_1:62420348-62420367 None:intergenic 35.0%
! ATCGTCCAAATCTAGTGTTT+TGG + chr1_1:62420373-62420392 None:intergenic 35.0%
TAGATTTGGACGATCTCTTT+CGG - chr1_1:62420379-62420398 Msa0034440:exon 35.0%
ACGTAACATAGATAGAGTGA+AGG + chr1_1:62420565-62420584 None:intergenic 35.0%
ATCTATGTTACGTCTTCTAC+CGG - chr1_1:62420572-62420591 Msa0034440:intron 35.0%
!! TACCGGTTATTTTATCATGG+CGG - chr1_1:62420589-62420608 Msa0034440:intron 35.0%
! TGCTTATCATACCTTGCTTT+TGG - chr1_1:62420703-62420722 Msa0034440:intron 35.0%
CTCTGATGAATTTGTCTTGT+TGG - chr1_1:62420732-62420751 Msa0034440:intron 35.0%
TGGGTTACTTATTCGATAGT+GGG - chr1_1:62420808-62420827 Msa0034440:intron 35.0%
!! AATCTAAGGTATCGGACATT+GGG + chr1_1:62420961-62420980 None:intergenic 35.0%
! AGTTGACCAATCTAAGGTAT+CGG + chr1_1:62420969-62420988 None:intergenic 35.0%
ATTCATCGTTGAAGGAAACA+AGG - chr1_1:62421013-62421032 Msa0034440:intron 35.0%
TTTCATAACCCCACCTATTT+GGG + chr1_1:62421146-62421165 None:intergenic 35.0%
ACACAATGTAATGCGAATTC+AGG - chr1_1:62421198-62421217 Msa0034440:intron 35.0%
CACAATGTAATGCGAATTCA+GGG - chr1_1:62421199-62421218 Msa0034440:intron 35.0%
ACAATGTAATGCGAATTCAG+GGG - chr1_1:62421200-62421219 Msa0034440:intron 35.0%
ATGTGAGAATCTGTTCCATA+AGG + chr1_1:62421267-62421286 None:intergenic 35.0%
! TGTATCAGAAGTGTATGTGT+TGG - chr1_1:62421461-62421480 Msa0034440:intron 35.0%
AGAGCATATTTCCCTAAACA+TGG - chr1_1:62421694-62421713 Msa0034440:five_prime_UTR 35.0%
GAGCATATTTCCCTAAACAT+GGG - chr1_1:62421695-62421714 Msa0034440:five_prime_UTR 35.0%
AGCATATTTCCCTAAACATG+GGG - chr1_1:62421696-62421715 Msa0034440:five_prime_UTR 35.0%
!! TGGCCCCCTTTTAAAAAAAA+TGG + chr1_1:62421731-62421750 None:intergenic 35.0%
! GTTTGCAAAAGTAGCGATTT+TGG + chr1_1:62421751-62421770 None:intergenic 35.0%
!!! ATCGCTACTTTTGCAAACTT+AGG - chr1_1:62421753-62421772 Msa0034440:five_prime_UTR 35.0%
!!! TCGCTACTTTTGCAAACTTA+GGG - chr1_1:62421754-62421773 Msa0034440:five_prime_UTR 35.0%
GGATTGCAAGACGAAGAAAA+TGG + chr1_1:62415798-62415817 None:intergenic 40.0%
!! CTGAAACTTGTTGAGAGAAG+TGG + chr1_1:62415838-62415857 None:intergenic 40.0%
TACAACATACGAACGAACCT+TGG + chr1_1:62415927-62415946 None:intergenic 40.0%
! GTATTTGGGGATGATTTTGG+AGG + chr1_1:62416199-62416218 None:intergenic 40.0%
!! ACTTTGAGAAGTGAGGGTTT+TGG + chr1_1:62416277-62416296 None:intergenic 40.0%
ATTTGTTTGCGAGTTTGGAG+GGG + chr1_1:62416310-62416329 None:intergenic 40.0%
GTATTTGTTTGCGAGTTTGG+AGG + chr1_1:62416312-62416331 None:intergenic 40.0%
!!! CTTTTTTTGCGAGTTTGGAG+GGG + chr1_1:62416487-62416506 None:intergenic 40.0%
!!! GCTTTTTTTGCGAGTTTGGA+GGG + chr1_1:62416488-62416507 None:intergenic 40.0%
!!! TTGGGCTTTTTTTGCGAGTT+TGG + chr1_1:62416492-62416511 None:intergenic 40.0%
AAAAAAAGCCCAAGACACTG+CGG - chr1_1:62416499-62416518 Msa0034440:three_prime_UTR 40.0%
!! TTAGGCTTTGTTTGCGAGTT+TGG - chr1_1:62416540-62416559 Msa0034440:three_prime_UTR 40.0%
! GCAAATAGCTTGTCTACTAG+CGG + chr1_1:62416772-62416791 None:intergenic 40.0%
! CTCTCCAATCTTACGGTTTT+GGG + chr1_1:62417264-62417283 None:intergenic 40.0%
GTCGGGATTTGAAAGCAATT+CGG - chr1_1:62417432-62417451 Msa0034440:intron 40.0%
TCGGGATTTGAAAGCAATTC+GGG - chr1_1:62417433-62417452 Msa0034440:intron 40.0%
TTTGAAAGCAATTCGGGACA+AGG - chr1_1:62417439-62417458 Msa0034440:intron 40.0%
GATGCAATATTGGTAAGCCA+TGG - chr1_1:62417504-62417523 Msa0034440:intron 40.0%
! TTGTTTTCATCCTCTGACCA+TGG + chr1_1:62417524-62417543 None:intergenic 40.0%
! CCAACTTTTGGCATCTAAGA+GGG + chr1_1:62417558-62417577 None:intergenic 40.0%
! TCCAACTTTTGGCATCTAAG+AGG + chr1_1:62417559-62417578 None:intergenic 40.0%
AAAGAGTTCATCGAGTCAGA+TGG - chr1_1:62417686-62417705 Msa0034440:intron 40.0%
GAGTCAGATGGCAAAAGAAA+AGG - chr1_1:62417698-62417717 Msa0034440:intron 40.0%
! GTTTTACCTCTAGTTGTGCA+AGG - chr1_1:62417964-62417983 Msa0034440:intron 40.0%
TATTGTGTGACGCATGATAC+TGG - chr1_1:62417990-62418009 Msa0034440:intron 40.0%
! CGCATGATACTGGTGAATTT+TGG - chr1_1:62418000-62418019 Msa0034440:intron 40.0%
! TTCTTACATTTGAGACCGGA+GGG + chr1_1:62418331-62418350 None:intergenic 40.0%
! TTTCTTACATTTGAGACCGG+AGG + chr1_1:62418332-62418351 None:intergenic 40.0%
TTTCTTACATTTGACACCGG+AGG - chr1_1:62418454-62418473 Msa0034440:intron 40.0%
TTCTTACATTTGACACCGGA+GGG - chr1_1:62418455-62418474 Msa0034440:intron 40.0%
AAACTTAGGGTGTGTTTGGA+TGG - chr1_1:62418718-62418737 Msa0034440:intron 40.0%
TTTGGATTGAGGGTTTAGGA+GGG + chr1_1:62418940-62418959 None:intergenic 40.0%
TGTGTTTGGATTGAGGGTTT+AGG + chr1_1:62418944-62418963 None:intergenic 40.0%
! TAAGGGTGTGTTTGGATTGA+GGG + chr1_1:62418950-62418969 None:intergenic 40.0%
! TTAAGGGTGTGTTTGGATTG+AGG + chr1_1:62418951-62418970 None:intergenic 40.0%
TCAATCCAAACACACCCTTA+AGG - chr1_1:62418950-62418969 Msa0034440:intron 40.0%
GAGACCGATTGAAACATTAG+TGG - chr1_1:62419227-62419246 Msa0034440:intron 40.0%
GGAATATCGGAGGACTTAAT+AGG - chr1_1:62419549-62419568 Msa0034440:intron 40.0%
GAATCACAAAGTAGTGCCTA+AGG - chr1_1:62419724-62419743 Msa0034440:intron 40.0%
AAAGTAGTGCCTAAGGTGAT+GGG - chr1_1:62419731-62419750 Msa0034440:intron 40.0%
CATAAATACCCCATCACCTT+AGG + chr1_1:62419743-62419762 None:intergenic 40.0%
AAAGGCTTAGAGGTAGAAAG+TGG - chr1_1:62419869-62419888 Msa0034440:intron 40.0%
AAGGCTTAGAGGTAGAAAGT+GGG - chr1_1:62419870-62419889 Msa0034440:intron 40.0%
! TACCTGGTTCGATTCTCTTT+GGG - chr1_1:62420005-62420024 Msa0034440:CDS 40.0%
TAAAGGGAAAAAGGCGATGA+AGG - chr1_1:62420302-62420321 Msa0034440:CDS 40.0%
AGAGAACTGTGAACTTCCTT+GGG - chr1_1:62420329-62420348 Msa0034440:CDS 40.0%
TTGGTTGGGGAAGCTAATAA+AGG + chr1_1:62420510-62420529 None:intergenic 40.0%
!! ACCGGTTATTTTATCATGGC+GGG - chr1_1:62420590-62420609 Msa0034440:intron 40.0%
ATCAATCTCAAAATTGCGGC+TGG - chr1_1:62420788-62420807 Msa0034440:intron 40.0%
TCAATCTCAAAATTGCGGCT+GGG - chr1_1:62420789-62420808 Msa0034440:intron 40.0%
CTGGGTTACTTATTCGATAG+TGG - chr1_1:62420807-62420826 Msa0034440:intron 40.0%
!! TATTCGATAGTGGGAAAACC+AGG - chr1_1:62420817-62420836 Msa0034440:intron 40.0%
!! ATTCGATAGTGGGAAAACCA+GGG - chr1_1:62420818-62420837 Msa0034440:intron 40.0%
!! CAATCTAAGGTATCGGACAT+TGG + chr1_1:62420962-62420981 None:intergenic 40.0%
CAATGTCCGATACCTTAGAT+TGG - chr1_1:62420960-62420979 Msa0034440:intron 40.0%
CATCACAGTTGACCAATCTA+AGG + chr1_1:62420975-62420994 None:intergenic 40.0%
! CTGTGATGAGCAACTTTTAG+TGG - chr1_1:62420987-62421006 Msa0034440:intron 40.0%
! AGTGGTTGATTCATCGTTGA+AGG - chr1_1:62421005-62421024 Msa0034440:intron 40.0%
ATGCATTGAGCAACCCAAAT+AGG - chr1_1:62421130-62421149 Msa0034440:intron 40.0%
ATTGAGCAACCCAAATAGGT+GGG - chr1_1:62421134-62421153 Msa0034440:intron 40.0%
CTTTCATAACCCCACCTATT+TGG + chr1_1:62421147-62421166 None:intergenic 40.0%
ACATTGTGTATACAGACGAC+TGG + chr1_1:62421187-62421206 None:intergenic 40.0%
TGAGAATCTGTTCCATAAGG+AGG + chr1_1:62421264-62421283 None:intergenic 40.0%
TGGAACAGATTCTCACATGT+TGG - chr1_1:62421269-62421288 Msa0034440:intron 40.0%
CAGATTCTCACATGTTGGAT+TGG - chr1_1:62421274-62421293 Msa0034440:intron 40.0%
CACAAAGACCACAAGTAACA+CGG + chr1_1:62421363-62421382 None:intergenic 40.0%
CAAAAGTGACCCCATGTTTA+GGG + chr1_1:62421708-62421727 None:intergenic 40.0%
!!! CGCTACTTTTGCAAACTTAG+GGG - chr1_1:62421755-62421774 Msa0034440:five_prime_UTR 40.0%
!!! GCTACTTTTGCAAACTTAGG+GGG - chr1_1:62421756-62421775 Msa0034440:five_prime_UTR 40.0%
CTTGTTGAGAGAAGTGGATG+CGG + chr1_1:62415832-62415851 None:intergenic 45.0%
TTTGCGAGTTTGGAAGGGAA+GGG - chr1_1:62416342-62416361 Msa0034440:three_prime_UTR 45.0%
!!! GGCTTTTTTTGCGAGTTTGG+AGG + chr1_1:62416489-62416508 None:intergenic 45.0%
CAATTGATCCGCAGTGTCTT+GGG + chr1_1:62416510-62416529 None:intergenic 45.0%
!! GCTTTGTTTGCGAGTTTGGA+GGG - chr1_1:62416544-62416563 Msa0034440:three_prime_UTR 45.0%
! CTTTGTTTGCGAGTTTGGAG+GGG - chr1_1:62416545-62416564 Msa0034440:three_prime_UTR 45.0%
! TCTACTAGCGGACAACAAAC+AGG + chr1_1:62416760-62416779 None:intergenic 45.0%
GTGTCCCAAAACCGTAAGAT+TGG - chr1_1:62417257-62417276 Msa0034440:CDS 45.0%
! GCTCTCCAATCTTACGGTTT+TGG + chr1_1:62417265-62417284 None:intergenic 45.0%
TGGGAAGCTCTCCAATCTTA+CGG + chr1_1:62417271-62417290 None:intergenic 45.0%
TAAGATTGGAGAGCTTCCCA+AGG - chr1_1:62417271-62417290 Msa0034440:CDS 45.0%
TATTGGTAAGCCATGGTCAG+AGG - chr1_1:62417511-62417530 Msa0034440:intron 45.0%
CCCTCTTAGATGCCAAAAGT+TGG - chr1_1:62417555-62417574 Msa0034440:intron 45.0%
GTTGAATGCGATTCAGGACA+AGG - chr1_1:62417631-62417650 Msa0034440:intron 45.0%
AAAGTAGGCTCAACTACCCA+AGG - chr1_1:62417767-62417786 Msa0034440:intron 45.0%
CTCAACTACCCAAGGTAACT+AGG - chr1_1:62417775-62417794 Msa0034440:intron 45.0%
CACAGGTTCCTAGTTACCTT+GGG + chr1_1:62417786-62417805 None:intergenic 45.0%
AATCCACAGTTGAGAACCAC+AGG + chr1_1:62417803-62417822 None:intergenic 45.0%
ATAGTCCCTTGCACAACTAG+AGG + chr1_1:62417973-62417992 None:intergenic 45.0%
TTGTCAGACTATACTCCCTC+CGG + chr1_1:62418473-62418492 None:intergenic 45.0%
TTAGGGTGTGTTTGGATGGA+GGG - chr1_1:62418722-62418741 Msa0034440:intron 45.0%
TGTGTTTGGATGGAGGGTTT+AGG - chr1_1:62418728-62418747 Msa0034440:intron 45.0%
TTTGGATGGAGGGTTTAGGA+GGG - chr1_1:62418732-62418751 Msa0034440:intron 45.0%
TTGGATTGAGGGTTTAGGAG+GGG + chr1_1:62418939-62418958 None:intergenic 45.0%
GTTTGGATTGAGGGTTTAGG+AGG + chr1_1:62418941-62418960 None:intergenic 45.0%
CCGCCCACTAATGTTTCAAT+CGG + chr1_1:62419234-62419253 None:intergenic 45.0%
CCGATTGAAACATTAGTGGG+CGG - chr1_1:62419231-62419250 Msa0034440:intron 45.0%
! TTGAAACATTAGTGGGCGGT+AGG - chr1_1:62419235-62419254 Msa0034440:intron 45.0%
! TGAAACATTAGTGGGCGGTA+GGG - chr1_1:62419236-62419255 Msa0034440:intron 45.0%
CAAAGTAGTGCCTAAGGTGA+TGG - chr1_1:62419730-62419749 Msa0034440:intron 45.0%
AAGTAGTGCCTAAGGTGATG+GGG - chr1_1:62419732-62419751 Msa0034440:intron 45.0%
TAGAGGTAGAAAGTGGGCAA+CGG - chr1_1:62419876-62419895 Msa0034440:intron 45.0%
AAATGTCACCAAGCTGTACC+TGG - chr1_1:62419989-62420008 Msa0034440:CDS 45.0%
! GTACCTGGTTCGATTCTCTT+TGG - chr1_1:62420004-62420023 Msa0034440:CDS 45.0%
CAGAGAACTGTGAACTTCCT+TGG - chr1_1:62420328-62420347 Msa0034440:CDS 45.0%
! GACGATCTCTTTCGGTTTTC+CGG - chr1_1:62420387-62420406 Msa0034440:intron 45.0%
TTTCCGGTGTGTGCAAGAAT+TGG - chr1_1:62420403-62420422 Msa0034440:intron 45.0%
CATCCAATTCTTGCACACAC+CGG + chr1_1:62420409-62420428 None:intergenic 45.0%
CCCCGCCATGATAAAATAAC+CGG + chr1_1:62420594-62420613 None:intergenic 45.0%
!! CCGGTTATTTTATCATGGCG+GGG - chr1_1:62420591-62420610 Msa0034440:intron 45.0%
! CAGAGCATTTGCCAAAAGCA+AGG + chr1_1:62420717-62420736 None:intergenic 45.0%
TCACTGACAAGGCCAACATA+GGG - chr1_1:62420884-62420903 Msa0034440:intron 45.0%
CAAGCTAAGTACCCCTATGT+TGG + chr1_1:62420899-62420918 None:intergenic 45.0%
CATTGAGCAACCCAAATAGG+TGG - chr1_1:62421133-62421152 Msa0034440:intron 45.0%
TTGAGCAACCCAAATAGGTG+GGG - chr1_1:62421135-62421154 Msa0034440:intron 45.0%
!! GTTGTACACCGTGTTACTTG+TGG - chr1_1:62421352-62421371 Msa0034440:intron 45.0%
!!! CGGCAATTTTGGGACGAAAA+GGG + chr1_1:62421608-62421627 None:intergenic 45.0%
!!! TCGGCAATTTTGGGACGAAA+AGG + chr1_1:62421609-62421628 None:intergenic 45.0%
ACGCCACATGTCCCAAAAAA+GGG - chr1_1:62421633-62421652 Msa0034440:intron 45.0%
!!! GCGATTATGGCCCCTTTTTT+GGG + chr1_1:62421647-62421666 None:intergenic 45.0%
!!! TGCGATTATGGCCCCTTTTT+TGG + chr1_1:62421648-62421667 None:intergenic 45.0%
GCAAAAGTGACCCCATGTTT+AGG + chr1_1:62421709-62421728 None:intergenic 45.0%
GAAGGTAGCGAAGTGAAGTG+AGG + chr1_1:62415896-62415915 None:intergenic 50.0%
GCTACCTTCTTGCTTCTCCA+AGG - chr1_1:62415907-62415926 Msa0034440:three_prime_UTR 50.0%
CGAACCTTGGAGAAGCAAGA+AGG + chr1_1:62415914-62415933 None:intergenic 50.0%
! GAGGGGACTTTGAGAAGTGA+GGG + chr1_1:62416283-62416302 None:intergenic 50.0%
TTTGCGAGTTTGGAGGGGAA+TGG + chr1_1:62416550-62416569 None:intergenic 50.0%
GTTTGCGAGTTTGGAAGGGA+AGG - chr1_1:62416341-62416360 Msa0034440:three_prime_UTR 50.0%
TTGGAAGGGAAGGGAATGCT+TGG - chr1_1:62416351-62416370 Msa0034440:three_prime_UTR 50.0%
ATAGAGGAAAGTGGGATGGG+TGG - chr1_1:62416406-62416425 Msa0034440:three_prime_UTR 50.0%
TAGAGGAAAGTGGGATGGGT+GGG - chr1_1:62416407-62416426 Msa0034440:three_prime_UTR 50.0%
TTTGCGAGTTTGGAGGGGAA+GGG + chr1_1:62416550-62416569 None:intergenic 50.0%
! TTTTGCGAGTTTGGAGGGGA+AGG + chr1_1:62416483-62416502 None:intergenic 50.0%
GCAATTGATCCGCAGTGTCT+TGG + chr1_1:62416511-62416530 None:intergenic 50.0%
GACACTGCGGATCAATTGCT+AGG - chr1_1:62416512-62416531 Msa0034440:three_prime_UTR 50.0%
!! GGCTTTGTTTGCGAGTTTGG+AGG - chr1_1:62416543-62416562 Msa0034440:three_prime_UTR 50.0%
TTTGCGAGTTTGGAGGGGAA+GGG - chr1_1:62416550-62416569 Msa0034440:three_prime_UTR 50.0%
TGGGACACCGCATTGTTAGT+TGG + chr1_1:62417245-62417264 None:intergenic 50.0%
AAGCAATTCGGGACAAGGCA+AGG - chr1_1:62417444-62417463 Msa0034440:intron 50.0%
TCGGGAGTTGAATGCGATTC+AGG - chr1_1:62417625-62417644 Msa0034440:intron 50.0%
CCACAGGTTCCTAGTTACCT+TGG + chr1_1:62417787-62417806 None:intergenic 50.0%
CCAAGGTAACTAGGAACCTG+TGG - chr1_1:62417784-62417803 Msa0034440:intron 50.0%
GAACCTGTGGTTCTCAACTG+TGG - chr1_1:62417797-62417816 Msa0034440:intron 50.0%
CTTAGGGTGTGTTTGGATGG+AGG - chr1_1:62418721-62418740 Msa0034440:intron 50.0%
GTTTGGATGGAGGGTTTAGG+AGG - chr1_1:62418731-62418750 Msa0034440:intron 50.0%
TTGGATGGAGGGTTTAGGAG+GGG - chr1_1:62418733-62418752 Msa0034440:intron 50.0%
TTGAGGGTTTAGGAGGGGAA+GGG + chr1_1:62418934-62418953 None:intergenic 50.0%
ATTGAGGGTTTAGGAGGGGA+AGG + chr1_1:62418935-62418954 None:intergenic 50.0%
GAATCGAACCAGGTACAGCT+TGG + chr1_1:62420000-62420019 None:intergenic 50.0%
CACCCAAAGAGAATCGAACC+AGG + chr1_1:62420010-62420029 None:intergenic 50.0%
CGGTGTGTGCAAGAATTGGA+TGG - chr1_1:62420407-62420426 Msa0034440:intron 50.0%
!! GATAGTGGGAAAACCAGGGA+GGG - chr1_1:62420822-62420841 Msa0034440:intron 50.0%
ATGAAGTCAACAACCCTCCC+TGG + chr1_1:62420838-62420857 None:intergenic 50.0%
!! AGGGAGGGTTGTTGACTTCA+TGG - chr1_1:62420837-62420856 Msa0034440:intron 50.0%
GTCACTGACAAGGCCAACAT+AGG - chr1_1:62420883-62420902 Msa0034440:intron 50.0%
CACTGACAAGGCCAACATAG+GGG - chr1_1:62420885-62420904 Msa0034440:intron 50.0%
TCTGTTCCATAAGGAGGAGC+TGG + chr1_1:62421258-62421277 None:intergenic 50.0%
! GGCGTCTTCTCGGCAATTTT+GGG + chr1_1:62421618-62421637 None:intergenic 50.0%
! TGGCGTCTTCTCGGCAATTT+TGG + chr1_1:62421619-62421638 None:intergenic 50.0%
GACGCCACATGTCCCAAAAA+AGG - chr1_1:62421632-62421651 Msa0034440:intron 50.0%
CGCCACATGTCCCAAAAAAG+GGG - chr1_1:62421634-62421653 Msa0034440:intron 50.0%
GTTGAGAGAAGTGGATGCGG+CGG + chr1_1:62415829-62415848 None:intergenic 55.0%
! GGAGGGGACTTTGAGAAGTG+AGG + chr1_1:62416284-62416303 None:intergenic 55.0%
GAGTTTGGAGGGGAATGGAG+GGG + chr1_1:62416300-62416319 None:intergenic 55.0%
CGAGTTTGGAGGGGAATGGA+GGG + chr1_1:62416301-62416320 None:intergenic 55.0%
GTTTGCGAGTTTGGAGGGGA+AGG - chr1_1:62416549-62416568 Msa0034440:three_prime_UTR 55.0%
GAGTTTGGAGGGGAAGGGAA+GGG - chr1_1:62416555-62416574 Msa0034440:three_prime_UTR 55.0%
ATGCGATTCAGGACAAGGCC+AGG - chr1_1:62417636-62417655 Msa0034440:intron 55.0%
TTGCACACATGTGCGACGCA+CGG - chr1_1:62418503-62418522 Msa0034440:intron 55.0%
TGGAGGGTTTAGGAGGGGAA+TGG - chr1_1:62418738-62418757 Msa0034440:intron 55.0%
AGGGTTTAGGAGGGGAATGG+AGG - chr1_1:62418741-62418760 Msa0034440:intron 55.0%
GGGTTTAGGAGGGGAATGGA+GGG - chr1_1:62418742-62418761 Msa0034440:intron 55.0%
GGTTTAGGAGGGGAATGGAG+GGG - chr1_1:62418743-62418762 Msa0034440:intron 55.0%
! AACATTAGTGGGCGGTAGGG+AGG - chr1_1:62419239-62419258 Msa0034440:intron 55.0%
!! CGATAGTGGGAAAACCAGGG+AGG - chr1_1:62420821-62420840 Msa0034440:intron 55.0%
ACGCTTCCAGCTCCTCCTTA+TGG - chr1_1:62421249-62421268 Msa0034440:intron 55.0%
TGGGACATGTGGCGTCTTCT+CGG + chr1_1:62421628-62421647 None:intergenic 55.0%
!!! GGCCCCTTTTTTGGGACATG+TGG + chr1_1:62421639-62421658 None:intergenic 55.0%
GTGGATGCGGCGGATGTGTT+TGG + chr1_1:62415819-62415838 None:intergenic 60.0%
GCGAGTTTGGAGGGGAATGG+AGG + chr1_1:62416302-62416321 None:intergenic 60.0%
AGGAAAGTGGGATGGGTGGG+AGG - chr1_1:62416410-62416429 Msa0034440:three_prime_UTR 60.0%
GGAAAGTGGGATGGGTGGGA+GGG - chr1_1:62416411-62416430 Msa0034440:three_prime_UTR 60.0%
! AGGGGAAGGGAAGGCTTTGG+GGG + chr1_1:62416469-62416488 None:intergenic 60.0%
GAGGGGAAGGGAAGGCTTTG+GGG + chr1_1:62416470-62416489 None:intergenic 60.0%
GGAGGGGAAGGGAAGGCTTT+GGG + chr1_1:62416471-62416490 None:intergenic 60.0%
TGGAGGGGAAGGGAAGGCTT+TGG + chr1_1:62416472-62416491 None:intergenic 60.0%
CGAGTTTGGAGGGGAAGGGA+AGG + chr1_1:62416554-62416573 None:intergenic 60.0%
CGAGTTTGGAGGGGAAGGGA+AGG - chr1_1:62416554-62416573 Msa0034440:three_prime_UTR 60.0%
TGCACACATGTGCGACGCAC+GGG - chr1_1:62418504-62418523 Msa0034440:intron 60.0%
TTAGGAGGGGAATGGAGGGG+AGG - chr1_1:62418746-62418765 Msa0034440:intron 60.0%
TAGGAGGGGAATGGAGGGGA+GGG - chr1_1:62418747-62418766 Msa0034440:intron 60.0%
GGTTTAGGAGGGGAAGGGAG+GGG + chr1_1:62418929-62418948 None:intergenic 60.0%
GGGTTTAGGAGGGGAAGGGA+GGG + chr1_1:62418930-62418949 None:intergenic 60.0%
AGGGTTTAGGAGGGGAAGGG+AGG + chr1_1:62418931-62418950 None:intergenic 60.0%
! ATTAGTGGGCGGTAGGGAGG+TGG - chr1_1:62419242-62419261 Msa0034440:intron 60.0%
TGGGATGGGTGGGAGGGCTT+TGG - chr1_1:62416417-62416436 Msa0034440:three_prime_UTR 65.0%
GGGATGGGTGGGAGGGCTTT+GGG - chr1_1:62416418-62416437 Msa0034440:three_prime_UTR 65.0%
GGATGGGTGGGAGGGCTTTG+GGG - chr1_1:62416419-62416438 Msa0034440:three_prime_UTR 65.0%
! GATGGGTGGGAGGGCTTTGG+GGG - chr1_1:62416420-62416439 Msa0034440:three_prime_UTR 65.0%
!! GGAAGGGAAGGCTTTGGGGG+TGG + chr1_1:62416466-62416485 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 62415777 62421844 62415777 ID=Msa0034440;Name=Msa0034440
chr1_1 mRNA 62415777 62421844 62415777 ID=Msa0034440-mRNA-1;Parent=Msa0034440;Name=Msa0034440-mRNA-1;_AED=0.17;_eAED=0.17;_QI=156|1|1|1|0.5|0.33|3|1299|244
chr1_1 exon 62415777 62417314 62415777 ID=Msa0034440-mRNA-1:exon:19736;Parent=Msa0034440-mRNA-1
chr1_1 exon 62419902 62420401 62419902 ID=Msa0034440-mRNA-1:exon:19735;Parent=Msa0034440-mRNA-1
chr1_1 exon 62421693 62421844 62421693 ID=Msa0034440-mRNA-1:exon:19734;Parent=Msa0034440-mRNA-1
chr1_1 five_prime_UTR 62421693 62421844 62421693 ID=Msa0034440-mRNA-1:five_prime_utr;Parent=Msa0034440-mRNA-1
chr1_1 five_prime_UTR 62420398 62420401 62420398 ID=Msa0034440-mRNA-1:five_prime_utr;Parent=Msa0034440-mRNA-1
chr1_1 CDS 62419902 62420397 62419902 ID=Msa0034440-mRNA-1:cds;Parent=Msa0034440-mRNA-1
chr1_1 CDS 62417076 62417314 62417076 ID=Msa0034440-mRNA-1:cds;Parent=Msa0034440-mRNA-1
chr1_1 three_prime_UTR 62415777 62417075 62415777 ID=Msa0034440-mRNA-1:three_prime_utr;Parent=Msa0034440-mRNA-1
Gene Sequence

>Msa0034440

ATGGCGGCAAATAGTGATCCAACTAACAATGCGGTGTCCCAAAACCGTAAGATTGGAGAGCTTCCCAAGGAAGATAATCCGAAAATTGGATACAATAGTGGTAAGCATTGGTCAGATGATGAAAACAATGTGCTCAAGTCCTTCTTAGATACAAAAAGTTGGGAAGACATCAATTGGAAAGACATCAGGGATGAAGAAAAATTGTTTGGTCGGGATTTGAAAGCAATTCGGGACAAGGCAAGGAAACTTTTTAAAAAGGAAAGACAAGATCCGAAAATTAGATGCAATATTGGTAAGCCATGGTCAGAGGATGAAAACAATGCGCTCAAGTCCCTCTTAGATGCCAAAAGTTGGAAAGACATCAATTGGAAAGACATAAGGGATGAAGAAAAACTGTTTGGTCGGGAGTTGAATGCGATTCAGGACAAGGCCAGGAAGTTTTTTAAAAAGGAAATACATGAAAAAGAGTTCATCGAGTCAGATGGCAAAAGAAAAGGGAAAAAGGCGATGAAGGTAGCAGAGAACTGTGAACTTCCTTGGGATGTACTTGATATCATTTCCAAAACACTAGATTTGGACGATCTCTTTCGGTTTTCCGGTGTGTGCAAGAATTGGATGGCTTTTTATTGGAGAAATTTACTGGCTCTCAAGAACCATTACTTCTTCAAGTTTCGTATAATCATAAGGAGTCATATTCCTTTATTAGCTTCCCCAACCAAAAGATTTATTGCTTGA
Protein sequence

>Msa0034440

MAANSDPTNNAVSQNRKIGELPKEDNPKIGYNSGKHWSDDENNVLKSFLDTKSWEDINWKDIRDEEKLFGRDLKAIRDKARKLFKKERQDPKIRCNIGKPWSEDENNALKSLLDAKSWKDINWKDIRDEEKLFGRELNAIQDKARKFFKKEIHEKEFIESDGKRKGKKAMKVAENCELPWDVLDIISKTLDLDDLFRFSGVCKNWMAFYWRNLLALKNHYFFKFRIIIRSHIPLLASPTKRFIA*