Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0052630 | RHN69572.1 | 91.026 | 78 | 7 | 0 | 76 | 153 | 47 | 124 | 2.07e-39 | 150 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0052630 | sp|O65020|ETO1_ARATH | 48.819 | 127 | 35 | 1 | 345 | 441 | 561 | 687 | 6.33e-29 | 124 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0052630 | A0A396IVJ2 | 91.026 | 78 | 7 | 0 | 76 | 153 | 47 | 124 | 9.89e-40 | 150 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001890 | Msa0052630 | 0.850334 | 1.816275e-60 | -8.615850e-47 |
| Msa0052630 | Msa0067890 | 0.960876 | 4.696159e-119 | -8.615850e-47 |
| Msa0052630 | Msa0164370 | 0.801129 | 1.041673e-48 | -8.615850e-47 |
| Msa0052630 | Msa0337510 | 0.817384 | 3.391359e-52 | -8.615850e-47 |
| Msa0052630 | Msa0364990 | 0.800801 | 1.215199e-48 | -8.615850e-47 |
| Msa0052630 | Msa0414020 | 0.818205 | 2.213034e-52 | -8.615850e-47 |
| Msa0052630 | Msa0662450 | 0.866018 | 3.873220e-65 | -8.615850e-47 |
| Msa0052630 | Msa0791030 | 0.812845 | 3.453228e-51 | -8.615850e-47 |
| Msa0052630 | Msa0987930 | 0.903258 | 4.175196e-79 | -8.615850e-47 |
| Msa0052630 | Msa1253400 | 0.803790 | 2.946022e-49 | -8.615850e-47 |
| Msa0052630 | Msa1253810 | 0.822407 | 2.408210e-53 | -8.615850e-47 |
| Msa0052630 | Msa1325930 | 0.883463 | 4.392559e-71 | -8.615850e-47 |
| Msa0052630 | Msa1447680 | 0.858842 | 6.238637e-63 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0052630 | MtrunA17_Chr3g0126151 | 91.026 | 78 | 7 | 0 | 76 | 153 | 47 | 124 | 1.90e-43 | 150 |
| Msa0052630 | MtrunA17_Chr3g0105811 | 72.441 | 127 | 5 | 1 | 345 | 441 | 537 | 663 | 3.61e-37 | 145 |
| Msa0052630 | MtrunA17_Chr4g0030191 | 85.714 | 91 | 13 | 0 | 65 | 155 | 158 | 248 | 2.68e-36 | 139 |
| Msa0052630 | MtrunA17_Chr4g0005681 | 47.143 | 140 | 44 | 1 | 332 | 441 | 548 | 687 | 4.57e-33 | 133 |
| Msa0052630 | MtrunA17_Chr7g0243131 | 48.062 | 129 | 37 | 1 | 343 | 441 | 300 | 428 | 2.69e-31 | 127 |
| Msa0052630 | MtrunA17_Chr7g0263581 | 73.626 | 91 | 24 | 0 | 65 | 155 | 166 | 256 | 3.71e-29 | 119 |
| Msa0052630 | MtrunA17_Chr4g0053181 | 73.626 | 91 | 24 | 0 | 65 | 155 | 203 | 293 | 1.80e-28 | 118 |
| Msa0052630 | MtrunA17_Chr5g0401891 | 73.626 | 91 | 24 | 0 | 65 | 155 | 179 | 269 | 2.57e-28 | 117 |
| Msa0052630 | MtrunA17_Chr2g0325911 | 69.388 | 98 | 30 | 0 | 65 | 162 | 161 | 258 | 2.73e-28 | 117 |
| Msa0052630 | MtrunA17_Chr3g0116461 | 87.719 | 57 | 7 | 0 | 184 | 240 | 251 | 307 | 4.97e-22 | 96.7 |
| Msa0052630 | MtrunA17_Chr1g0185181 | 38.621 | 145 | 55 | 2 | 327 | 441 | 484 | 624 | 5.91e-21 | 96.7 |
| Msa0052630 | MtrunA17_Chr6g0452911 | 44.330 | 97 | 53 | 1 | 60 | 155 | 103 | 199 | 1.52e-18 | 87.4 |
| Msa0052630 | MtrunA17_Chr4g0054351 | 45.556 | 90 | 48 | 1 | 65 | 153 | 350 | 439 | 2.08e-18 | 88.2 |
| Msa0052630 | MtrunA17_Chr3g0135161 | 45.055 | 91 | 49 | 1 | 64 | 153 | 346 | 436 | 3.55e-18 | 87.4 |
| Msa0052630 | MtrunA17_Chr7g0216601 | 44.565 | 92 | 50 | 1 | 65 | 155 | 105 | 196 | 8.34e-18 | 85.1 |
| Msa0052630 | MtrunA17_Chr8g0367311 | 39.286 | 112 | 66 | 2 | 43 | 153 | 1 | 111 | 8.74e-18 | 83.2 |
| Msa0052630 | MtrunA17_Chr8g0343851 | 43.956 | 91 | 50 | 1 | 64 | 153 | 284 | 374 | 6.13e-17 | 83.6 |
| Msa0052630 | MtrunA17_Chr1g0152161 | 41.758 | 91 | 52 | 1 | 64 | 153 | 348 | 438 | 1.66e-16 | 82.4 |
| Msa0052630 | MtrunA17_Chr5g0412151 | 44.444 | 90 | 49 | 1 | 65 | 153 | 264 | 353 | 3.88e-16 | 80.9 |
| Msa0052630 | MtrunA17_Chr5g0400871 | 44.444 | 90 | 49 | 1 | 65 | 153 | 289 | 378 | 4.33e-16 | 80.9 |
| Msa0052630 | MtrunA17_Chr8g0355191 | 44.086 | 93 | 51 | 1 | 64 | 155 | 91 | 183 | 6.78e-16 | 79.7 |
| Msa0052630 | MtrunA17_Chr4g0072291 | 42.222 | 90 | 51 | 1 | 65 | 153 | 199 | 288 | 7.34e-16 | 80.1 |
| Msa0052630 | MtrunA17_Chr4g0073521 | 41.935 | 93 | 53 | 1 | 64 | 155 | 83 | 175 | 9.89e-16 | 78.6 |
| Msa0052630 | MtrunA17_Chr7g0249621 | 41.111 | 90 | 52 | 1 | 65 | 153 | 299 | 388 | 1.79e-15 | 79.3 |
| Msa0052630 | MtrunA17_Chr4g0032631 | 38.889 | 90 | 54 | 1 | 65 | 153 | 203 | 292 | 9.13e-15 | 76.6 |
| Msa0052630 | MtrunA17_Chr2g0328971 | 39.560 | 91 | 54 | 1 | 64 | 153 | 203 | 293 | 9.91e-15 | 76.6 |
| Msa0052630 | MtrunA17_Chr8g0355181 | 43.011 | 93 | 52 | 1 | 64 | 155 | 92 | 184 | 2.12e-12 | 68.6 |
| Msa0052630 | MtrunA17_Chr8g0362541 | 44.086 | 93 | 51 | 1 | 64 | 155 | 105 | 197 | 2.85e-12 | 68.6 |
| Msa0052630 | MtrunA17_Chr4g0002011 | 41.333 | 75 | 43 | 1 | 82 | 155 | 93 | 167 | 9.62e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0052630 | AT2G28550.5 | 72.632 | 95 | 26 | 0 | 65 | 159 | 14 | 108 | 4.42e-30 | 119 |
| Msa0052630 | AT3G51770.2 | 48.819 | 127 | 35 | 1 | 345 | 441 | 569 | 695 | 6.41e-30 | 124 |
| Msa0052630 | AT3G51770.1 | 48.819 | 127 | 35 | 1 | 345 | 441 | 561 | 687 | 6.68e-30 | 124 |
| Msa0052630 | AT4G36920.1 | 75.824 | 91 | 22 | 0 | 65 | 155 | 158 | 248 | 7.01e-30 | 121 |
| Msa0052630 | AT4G36920.2 | 75.824 | 91 | 22 | 0 | 65 | 155 | 158 | 248 | 7.01e-30 | 121 |
| Msa0052630 | AT2G28550.2 | 76.404 | 89 | 21 | 0 | 65 | 153 | 180 | 268 | 8.05e-30 | 117 |
| Msa0052630 | AT2G28550.6 | 76.404 | 89 | 21 | 0 | 65 | 153 | 180 | 268 | 8.05e-30 | 117 |
| Msa0052630 | AT2G28550.4 | 74.725 | 91 | 23 | 0 | 65 | 155 | 180 | 270 | 1.55e-29 | 119 |
| Msa0052630 | AT2G28550.1 | 72.632 | 95 | 26 | 0 | 65 | 159 | 180 | 274 | 6.52e-29 | 119 |
| Msa0052630 | AT2G28550.3 | 74.725 | 91 | 23 | 0 | 65 | 155 | 180 | 270 | 1.04e-28 | 118 |
| Msa0052630 | AT5G58550.1 | 44.882 | 127 | 40 | 1 | 345 | 441 | 527 | 653 | 1.58e-27 | 117 |
| Msa0052630 | AT5G67180.4 | 70.330 | 91 | 27 | 0 | 65 | 155 | 123 | 213 | 5.65e-27 | 109 |
| Msa0052630 | AT5G67180.3 | 70.330 | 91 | 27 | 0 | 65 | 155 | 123 | 213 | 9.54e-27 | 109 |
| Msa0052630 | AT5G67180.2 | 70.330 | 91 | 27 | 0 | 65 | 155 | 123 | 213 | 1.08e-26 | 110 |
| Msa0052630 | AT5G67180.1 | 70.330 | 91 | 27 | 0 | 65 | 155 | 123 | 213 | 1.68e-26 | 110 |
| Msa0052630 | AT3G48420.1 | 80.702 | 57 | 11 | 0 | 184 | 240 | 247 | 303 | 2.74e-18 | 86.3 |
| Msa0052630 | AT5G60120.6 | 60.920 | 87 | 34 | 0 | 65 | 151 | 187 | 273 | 4.37e-18 | 87.0 |
| Msa0052630 | AT5G60120.1 | 60.920 | 87 | 34 | 0 | 65 | 151 | 187 | 273 | 5.29e-18 | 87.0 |
| Msa0052630 | AT5G60120.2 | 60.920 | 87 | 34 | 0 | 65 | 151 | 187 | 273 | 6.92e-18 | 86.7 |
| Msa0052630 | AT5G60120.4 | 60.920 | 87 | 34 | 0 | 65 | 151 | 187 | 273 | 6.98e-18 | 85.9 |
| Msa0052630 | AT5G60120.3 | 60.920 | 87 | 34 | 0 | 65 | 151 | 187 | 273 | 6.98e-18 | 85.9 |
| Msa0052630 | AT5G60120.5 | 60.920 | 87 | 34 | 0 | 65 | 151 | 187 | 273 | 6.98e-18 | 85.9 |
| Msa0052630 | AT2G39250.2 | 54.167 | 72 | 33 | 0 | 65 | 136 | 135 | 206 | 1.51e-17 | 82.4 |
| Msa0052630 | AT2G39250.1 | 54.167 | 72 | 33 | 0 | 65 | 136 | 135 | 206 | 3.39e-17 | 82.8 |
| Msa0052630 | AT5G57390.2 | 42.222 | 90 | 51 | 1 | 65 | 153 | 122 | 211 | 4.08e-16 | 80.9 |
| Msa0052630 | AT1G72570.1 | 42.222 | 90 | 51 | 1 | 65 | 153 | 260 | 349 | 5.15e-16 | 80.5 |
| Msa0052630 | AT5G57390.1 | 42.222 | 90 | 51 | 1 | 65 | 153 | 240 | 329 | 5.25e-16 | 80.9 |
| Msa0052630 | AT1G51190.1 | 41.111 | 90 | 52 | 1 | 65 | 153 | 227 | 316 | 5.96e-16 | 80.9 |
| Msa0052630 | AT5G17430.2 | 42.222 | 90 | 51 | 1 | 65 | 153 | 185 | 274 | 9.69e-16 | 80.1 |
| Msa0052630 | AT5G17430.1 | 42.222 | 90 | 51 | 1 | 65 | 153 | 247 | 336 | 1.03e-15 | 80.1 |
| Msa0052630 | AT5G10510.3 | 41.237 | 97 | 56 | 1 | 58 | 153 | 318 | 414 | 1.70e-15 | 79.7 |
| Msa0052630 | AT4G37750.1 | 42.222 | 90 | 51 | 1 | 65 | 153 | 320 | 409 | 1.76e-15 | 79.3 |
| Msa0052630 | AT5G65510.3 | 43.333 | 90 | 50 | 1 | 65 | 153 | 210 | 299 | 2.26e-15 | 77.4 |
| Msa0052630 | AT5G10510.2 | 41.758 | 91 | 52 | 1 | 64 | 153 | 263 | 353 | 3.03e-15 | 78.6 |
| Msa0052630 | AT5G65510.2 | 43.333 | 90 | 50 | 1 | 65 | 153 | 268 | 357 | 3.78e-15 | 78.2 |
| Msa0052630 | AT5G65510.1 | 43.333 | 90 | 50 | 1 | 65 | 153 | 268 | 357 | 3.78e-15 | 78.2 |
| Msa0052630 | AT5G65510.4 | 43.333 | 90 | 50 | 1 | 65 | 153 | 210 | 299 | 3.79e-15 | 77.8 |
| Msa0052630 | AT5G10510.6 | 42.222 | 90 | 51 | 1 | 65 | 153 | 305 | 394 | 4.84e-15 | 78.2 |
| Msa0052630 | AT5G10510.4 | 42.222 | 90 | 51 | 1 | 65 | 153 | 305 | 394 | 4.84e-15 | 78.2 |
| Msa0052630 | AT5G10510.7 | 42.222 | 90 | 51 | 1 | 65 | 153 | 267 | 356 | 4.88e-15 | 77.8 |
| Msa0052630 | AT5G10510.5 | 42.222 | 90 | 51 | 1 | 65 | 153 | 267 | 356 | 4.88e-15 | 77.8 |
| Msa0052630 | AT5G10510.1 | 42.222 | 90 | 51 | 1 | 65 | 153 | 290 | 379 | 5.24e-15 | 77.8 |
| Msa0052630 | AT3G54320.4 | 41.304 | 92 | 53 | 1 | 65 | 155 | 36 | 127 | 6.22e-15 | 76.6 |
| Msa0052630 | AT3G54320.5 | 41.304 | 92 | 53 | 1 | 65 | 155 | 36 | 127 | 6.22e-15 | 76.6 |
| Msa0052630 | AT3G54320.3 | 41.304 | 92 | 53 | 1 | 65 | 155 | 102 | 193 | 6.99e-15 | 77.0 |
| Msa0052630 | AT3G54320.1 | 41.304 | 92 | 53 | 1 | 65 | 155 | 102 | 193 | 7.37e-15 | 77.0 |
| Msa0052630 | AT3G20840.1 | 38.889 | 90 | 54 | 1 | 65 | 153 | 218 | 307 | 1.46e-14 | 76.6 |
| Msa0052630 | AT3G54990.2 | 57.500 | 80 | 34 | 0 | 65 | 144 | 149 | 228 | 2.63e-13 | 70.1 |
| Msa0052630 | AT3G54990.1 | 61.333 | 75 | 29 | 0 | 65 | 139 | 149 | 223 | 5.77e-13 | 70.5 |
| Msa0052630 | AT1G79700.4 | 45.652 | 92 | 49 | 1 | 65 | 155 | 7 | 98 | 1.73e-12 | 67.4 |
| Msa0052630 | AT1G79700.3 | 45.652 | 92 | 49 | 1 | 65 | 155 | 13 | 104 | 1.85e-12 | 67.4 |
| Msa0052630 | AT1G79700.2 | 45.652 | 92 | 49 | 1 | 65 | 155 | 89 | 180 | 5.48e-12 | 67.0 |
| Msa0052630 | AT1G16060.3 | 35.652 | 115 | 61 | 3 | 54 | 155 | 2 | 116 | 2.23e-11 | 64.7 |
| Msa0052630 | AT1G16060.1 | 43.243 | 74 | 41 | 1 | 83 | 155 | 113 | 186 | 3.47e-11 | 65.1 |
Find 121 sgRNAs with CRISPR-Local
Find 323 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGATCATTGTTTCATAATT+TGG | 0.097345 | 1_2:-6925395 | Msa0052630:CDS |
| AAACATCAGGAAGTTGTTTA+AGG | 0.196812 | 1_2:-6927460 | Msa0052630:CDS |
| ACTTTACATGGGAGGATTAA+AGG | 0.234605 | 1_2:-6924762 | Msa0052630:intron |
| TAAACAACTTCCTGATGTTT+TGG | 0.257525 | 1_2:+6927463 | None:intergenic |
| ATGTAGTTAGATAAGTTTCT+AGG | 0.272462 | 1_2:-6924903 | Msa0052630:intron |
| TGTGATTTCAGTCCTTTATC+TGG | 0.308734 | 1_2:-6926069 | Msa0052630:intron |
| AGTTGATGATGTTGGTTCTT+TGG | 0.313516 | 1_2:-6924652 | Msa0052630:CDS |
| GTTTCAGAACTTACCTCTTA+AGG | 0.317681 | 1_2:+6925478 | None:intergenic |
| ACCTGATTGTTTAGAGTTGA+AGG | 0.318328 | 1_2:-6924868 | Msa0052630:CDS |
| TTAAGGATGGCTTCATTATC+AGG | 0.321072 | 1_2:-6927443 | Msa0052630:CDS |
| GAACGATTATATACCTTTGT+AGG | 0.358428 | 1_2:+6925644 | None:intergenic |
| CAGTATTTGCCGGTAGAATC+AGG | 0.358742 | 1_2:+6924206 | None:intergenic |
| AACTCTAGCAGGCTCTTTCC+AGG | 0.361101 | 1_2:+6924600 | None:intergenic |
| TTTCAGAACTTACCTCTTAA+GGG | 0.361709 | 1_2:+6925479 | None:intergenic |
| ATTGCACTTGCAGTTCATAT+TGG | 0.363079 | 1_2:-6925550 | Msa0052630:intron |
| ATCGAGCTGCGATTAAATTC+AGG | 0.379752 | 1_2:-6928130 | Msa0052630:CDS |
| AGTAAACACCTTCCAGATAA+AGG | 0.389171 | 1_2:+6926057 | None:intergenic |
| AAATGCATTATGCAGGTATA+CGG | 0.405222 | 1_2:-6926657 | Msa0052630:intron |
| GCATTGATTCTTCCCTTAAG+AGG | 0.406835 | 1_2:-6925491 | Msa0052630:intron |
| GATAGACTTGCAGTATTTGC+CGG | 0.410071 | 1_2:+6924196 | None:intergenic |
| GACGTTGTATTTGACTTCAT+TGG | 0.414112 | 1_2:-6926611 | Msa0052630:CDS |
| TTCCTTCTTCTTCTTCAGTC+CGG | 0.423114 | 1_2:-6929004 | None:intergenic |
| CACACTGAGAAAGAAGAAAA+TGG | 0.425666 | 1_2:+6928875 | None:intergenic |
| TTGGTGAGTATTGTGAAATA+AGG | 0.427114 | 1_2:+6923153 | None:intergenic |
| GCAAAATCAGGCTCTACTAT+TGG | 0.434597 | 1_2:-6925513 | Msa0052630:CDS |
| AGCAATAATGCCAACAGGAT+TGG | 0.436526 | 1_2:-6923283 | Msa0052630:three_prime_UTR |
| TTATGATGATGATCTTAAAC+AGG | 0.440099 | 1_2:-6928072 | Msa0052630:intron |
| TTTAATCGCAGCTCGATCAT+AGG | 0.441826 | 1_2:+6928136 | None:intergenic |
| AACCAACTGTTGCAGATATT+AGG | 0.442398 | 1_2:+6923444 | None:intergenic |
| GATAGGGAGTGAATCTTAGT+TGG | 0.449443 | 1_2:+6927417 | None:intergenic |
| CTAGCAGCCGCTAAAGTAGC+TGG | 0.453585 | 1_2:-6926910 | Msa0052630:CDS |
| TCTTTGCAGGCCAAAACATC+AGG | 0.454379 | 1_2:-6927473 | Msa0052630:intron |
| TGGCAGCAAAGTGCAAAATC+AGG | 0.459814 | 1_2:-6925525 | Msa0052630:CDS |
| TGTTCAAAGGTATTTAGAAA+AGG | 0.464068 | 1_2:-6923210 | Msa0052630:three_prime_UTR |
| GTCTATCACAAAATCAAAGA+AGG | 0.465270 | 1_2:-6924180 | Msa0052630:CDS |
| GCCTTCAACTCTAAACAATC+AGG | 0.470343 | 1_2:+6924867 | None:intergenic |
| ATGGACAATGAATTTGAGAA+TGG | 0.470876 | 1_2:-6926175 | Msa0052630:CDS |
| AAGAAGAAAATGGTGGAGAT+TGG | 0.471464 | 1_2:+6928885 | None:intergenic |
| GTGGTCGAGGACAGCGCTAT+AGG | 0.473850 | 1_2:-6926934 | Msa0052630:CDS |
| TGCAGAAGCCTACTTACTGA+TGG | 0.478114 | 1_2:-6925415 | Msa0052630:intron |
| GTTTCAGCAATAATGCCAAC+AGG | 0.481394 | 1_2:-6923288 | Msa0052630:three_prime_UTR |
| TAAGGTTAGTTAAACAATAG+AGG | 0.481505 | 1_2:+6923171 | None:intergenic |
| TGAACTAATGTTATGTTCAA+AGG | 0.485312 | 1_2:-6923223 | Msa0052630:three_prime_UTR |
| TGGCAGTTGGGAAGCTCGAA+TGG | 0.485503 | 1_2:-6927864 | Msa0052630:CDS |
| ATTTCAGTCCTTTATCTGGA+AGG | 0.490219 | 1_2:-6926065 | Msa0052630:intron |
| CATGAAGGAGGCCAAGAGGA+AGG | 0.493620 | 1_2:-6927382 | Msa0052630:CDS |
| ATCAGGAAGTTGTTTAAGGA+TGG | 0.495341 | 1_2:-6927456 | Msa0052630:CDS |
| AGTCAATGGAAAGGAGTCAT+TGG | 0.496054 | 1_2:+6923134 | None:intergenic |
| GCTAACTACATAACTTTACA+TGG | 0.496572 | 1_2:-6924774 | Msa0052630:CDS |
| GCGATTAAATTCAGGGGAGT+TGG | 0.497882 | 1_2:-6928122 | Msa0052630:CDS |
| CTTCATCCCAGCTACTTTAG+CGG | 0.503426 | 1_2:+6926903 | None:intergenic |
| GCCAGATCAAACCTCTCCTC+AGG | 0.506138 | 1_2:+6926581 | None:intergenic |
| CAGATGCTAGAGAATGAGCC+TGG | 0.507226 | 1_2:-6924618 | Msa0052630:CDS |
| TCAAAACAAAGTATAGTCAA+TGG | 0.507968 | 1_2:+6923120 | None:intergenic |
| CACTGCACAAATGTGGCAGT+TGG | 0.508097 | 1_2:-6927877 | Msa0052630:CDS |
| GCTCGAATGGGTCAATTCCT+TGG | 0.510521 | 1_2:-6927851 | Msa0052630:CDS |
| ACTGCACAAATGTGGCAGTT+GGG | 0.511914 | 1_2:-6927876 | Msa0052630:CDS |
| CCGTGTGAGGAGAAGAGAAC+CGG | 0.514670 | 1_2:+6928985 | None:intergenic |
| AGATACTTGCCTGATTCTAC+CGG | 0.514786 | 1_2:-6924215 | Msa0052630:CDS |
| AACGATTATATACCTTTGTA+GGG | 0.515993 | 1_2:+6925645 | None:intergenic |
| GGCGAGGTCGACGGAGGAGA+CGG | 0.516043 | 1_2:+6928918 | None:intergenic |
| ACAAGCAACTTCTGATATGA+TGG | 0.520935 | 1_2:-6926152 | Msa0052630:CDS |
| TTACAGATGTGTCGTGGTCG+AGG | 0.524433 | 1_2:-6926947 | Msa0052630:intron |
| AGTTATGTAGTTAGCCTCCA+TGG | 0.526706 | 1_2:+6924782 | None:intergenic |
| CATGCGCCTAGCACAGGATA+GGG | 0.528401 | 1_2:+6927401 | None:intergenic |
| ACAATGATCCATCAGTAAGT+AGG | 0.529454 | 1_2:+6925407 | None:intergenic |
| GTGTTCAACGGCGAGGTCGA+CGG | 0.530961 | 1_2:+6928909 | None:intergenic |
| AGAATGACGTCCCTTCCTCT+TGG | 0.531849 | 1_2:+6927371 | None:intergenic |
| CGGAGGAGACGGCAAGGTGG+CGG | 0.535976 | 1_2:+6928929 | None:intergenic |
| TCATGCGCCTAGCACAGGAT+AGG | 0.536282 | 1_2:+6927400 | None:intergenic |
| ATTGTTTAGAGTTGAAGGCT+TGG | 0.537047 | 1_2:-6924863 | Msa0052630:CDS |
| TCGAGCTGCGATTAAATTCA+GGG | 0.538997 | 1_2:-6928129 | Msa0052630:CDS |
| GACGGCAAGGTGGCGGTGTG+AGG | 0.539935 | 1_2:+6928936 | None:intergenic |
| GTCTGTCGCTACTACTCTTG+AGG | 0.550215 | 1_2:-6924575 | Msa0052630:intron |
| TTGGTGATCCTCCTGAGGAG+AGG | 0.552332 | 1_2:-6926592 | Msa0052630:intron |
| ACACAGCTCATGTTGCTGCT+AGG | 0.553358 | 1_2:-6928241 | Msa0052630:intron |
| TATTAGAGCTTTGTTAACCA+TGG | 0.554431 | 1_2:-6924799 | Msa0052630:CDS |
| GGCCTAATATCTGCAACAGT+TGG | 0.557391 | 1_2:-6923446 | Msa0052630:CDS |
| ATGAAGGAGGCCAAGAGGAA+GGG | 0.559525 | 1_2:-6927381 | Msa0052630:CDS |
| TAAACAATAGAGGACATCAA+TGG | 0.561945 | 1_2:+6923181 | None:intergenic |
| TGATGCAATCTACAGGATGA+TGG | 0.565247 | 1_2:-6927627 | Msa0052630:intron |
| AAACCACGCATGTGTATTGG+TGG | 0.565338 | 1_2:-6923411 | Msa0052630:CDS |
| CCGGTTCTCTTCTCCTCACA+CGG | 0.565646 | 1_2:-6928985 | Msa0052630:CDS |
| TTATGCAGGTATACGGCAGA+TGG | 0.570206 | 1_2:-6926650 | Msa0052630:intron |
| GGCAGTTGGGAAGCTCGAAT+GGG | 0.571868 | 1_2:-6927863 | Msa0052630:CDS |
| AGTGTATAGTAACAAAGAGC+GGG | 0.580787 | 1_2:-6926882 | Msa0052630:intron |
| TTGTCTCTATCATCAATCAA+AGG | 0.583253 | 1_2:-6928820 | Msa0052630:intron |
| TGGTATTCAGTTGATGATGT+TGG | 0.588095 | 1_2:-6924660 | Msa0052630:intron |
| GCGACAGACGAAACTCTAGC+AGG | 0.588210 | 1_2:+6924589 | None:intergenic |
| ACAAAGTATAGTCAATGGAA+AGG | 0.588594 | 1_2:+6923125 | None:intergenic |
| TCTATCACAAAATCAAAGAA+GGG | 0.593364 | 1_2:-6924179 | Msa0052630:intron |
| GAACAGATTAAACTGTCAGA+AGG | 0.597977 | 1_2:-6924246 | Msa0052630:intron |
| ATCCTGTGCTAGGCGCATGA+AGG | 0.598410 | 1_2:-6927397 | Msa0052630:intron |
| TCTTATTTACAGATGTGTCG+TGG | 0.600555 | 1_2:-6926953 | Msa0052630:intron |
| CTGTGCTAGGCGCATGAAGG+AGG | 0.602422 | 1_2:-6927394 | Msa0052630:intron |
| TGTTGCAAAATGCCCTACAA+AGG | 0.603887 | 1_2:-6925657 | Msa0052630:intron |
| AATGGAAGGACAATAGAAAG+TGG | 0.612556 | 1_2:-6926020 | Msa0052630:CDS |
| ACTTGCAGTTCATATTGGCA+TGG | 0.614305 | 1_2:-6925545 | Msa0052630:intron |
| TAGCAGCCGCTAAAGTAGCT+GGG | 0.615799 | 1_2:-6926909 | Msa0052630:CDS |
| TGATTGATGATAGAGACAAA+CGG | 0.617251 | 1_2:+6928824 | None:intergenic |
| TAGAGCTTTGTTAACCATGG+AGG | 0.620374 | 1_2:-6924796 | Msa0052630:CDS |
| CTTCATTGGTGATCCTCCTG+AGG | 0.623430 | 1_2:-6926597 | Msa0052630:CDS |
| AGATCAAACCTCTCCTCAGG+AGG | 0.625024 | 1_2:+6926584 | None:intergenic |
| ACTACATAACTTTACATGGG+AGG | 0.625525 | 1_2:-6924770 | Msa0052630:CDS |
| AAGTGTATAGTAACAAAGAG+CGG | 0.628437 | 1_2:-6926883 | Msa0052630:CDS |
| AATGATTGTGCCAATCCTGT+TGG | 0.632692 | 1_2:+6923273 | None:intergenic |
| AGTGGTTCAATTAATTCACA+TGG | 0.632880 | 1_2:-6926002 | Msa0052630:intron |
| TGATACCAACATTAAAACAC+AGG | 0.636892 | 1_2:+6923350 | None:intergenic |
| GGTCGACGGAGGAGACGGCA+AGG | 0.637294 | 1_2:+6928923 | None:intergenic |
| GGAGTAACACTGCACAAATG+TGG | 0.639362 | 1_2:-6927884 | Msa0052630:CDS |
| GATTGGTGTGTTCAACGGCG+AGG | 0.643453 | 1_2:+6928902 | None:intergenic |
| GTGGAGATTGGTGTGTTCAA+CGG | 0.645802 | 1_2:+6928897 | None:intergenic |
| TTCAACGGCGAGGTCGACGG+AGG | 0.650561 | 1_2:+6928912 | None:intergenic |
| GGCGCATGAAGGAGGCCAAG+AGG | 0.655314 | 1_2:-6927386 | Msa0052630:CDS |
| ACTGAGAAAGAAGAAAATGG+TGG | 0.665893 | 1_2:+6928878 | None:intergenic |
| AGAGGGAGTTCGAAGTACAG+AGG | 0.669918 | 1_2:-6927905 | Msa0052630:CDS |
| CTAACTACATAACTTTACAT+GGG | 0.671104 | 1_2:-6924773 | Msa0052630:CDS |
| CGACGGAGGAGACGGCAAGG+TGG | 0.673937 | 1_2:+6928926 | None:intergenic |
| CGAGCTGCGATTAAATTCAG+GGG | 0.681626 | 1_2:-6928128 | Msa0052630:CDS |
| AAATGTTTCTGCAAGCTGTG+CGG | 0.691119 | 1_2:+6925682 | None:intergenic |
| CATCCACCAATACACATGCG+TGG | 0.710635 | 1_2:+6923408 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATATGATTTACTATTTT+AGG | - | chr1_2:6923793-6923812 | Msa0052630:intron | 10.0% |
| !!! | TTGTGTAATTAATTTTTTTA+TGG | - | chr1_2:6923908-6923927 | Msa0052630:intron | 10.0% |
| !!! | ATAATCTTTTTTATTGTAAT+AGG | - | chr1_2:6926194-6926213 | Msa0052630:intron | 10.0% |
| !! | ATATTTAATATTATTGATCA+TGG | - | chr1_2:6927991-6928010 | Msa0052630:intron | 10.0% |
| !!! | TTTAATCGATTTAGATTTTT+TGG | - | chr1_2:6923384-6923403 | Msa0052630:three_prime_UTR | 15.0% |
| !!! | TTTATTTTTCACTTCATTTT+AGG | - | chr1_2:6923538-6923557 | Msa0052630:intron | 15.0% |
| !!! | ACTATTTTTTTCTTTGATTT+TGG | - | chr1_2:6923757-6923776 | Msa0052630:intron | 15.0% |
| !! | ACTTCAGTTAAATTAAAAAT+AGG | + | chr1_2:6924286-6924305 | None:intergenic | 15.0% |
| !! | TAATTTAACTGAAGTTATTT+AGG | - | chr1_2:6924291-6924310 | Msa0052630:intron | 15.0% |
| !! | CTTTGTTCAATTTATTTAAA+TGG | - | chr1_2:6924589-6924608 | Msa0052630:CDS | 15.0% |
| !! | TTCAATTTATTTAAATGGTT+TGG | - | chr1_2:6924594-6924613 | Msa0052630:CDS | 15.0% |
| !!! | GATTATTTTGTTTTTTTAGA+TGG | - | chr1_2:6925904-6925923 | Msa0052630:intron | 15.0% |
| !! | TCAACTATTTAACATATAAA+TGG | + | chr1_2:6926245-6926264 | None:intergenic | 15.0% |
| !! | TCATATATTAATTTCCAAAT+TGG | - | chr1_2:6926748-6926767 | Msa0052630:intron | 15.0% |
| !! | ATATTTATACGAAAATGAAA+GGG | + | chr1_2:6927130-6927149 | None:intergenic | 15.0% |
| !! | TATATTTATACGAAAATGAA+AGG | + | chr1_2:6927131-6927150 | None:intergenic | 15.0% |
| !!! | ATGGTCTTTTTTATATTTTT+AGG | - | chr1_2:6928010-6928029 | Msa0052630:intron | 15.0% |
| !! | TGATATTATTTACATGAATA+AGG | + | chr1_2:6928225-6928244 | None:intergenic | 15.0% |
| !!! | TGAAATGCATATTATTATTT+TGG | - | chr1_2:6928562-6928581 | Msa0052630:intron | 15.0% |
| !!! | AAATGGTATTTTCAAATTCA+AGG | + | chr1_2:6923445-6923464 | None:intergenic | 20.0% |
| !! | TTGAATTTGAAAATACCATT+TGG | - | chr1_2:6923444-6923463 | Msa0052630:CDS | 20.0% |
| !! | AAATAAAAACTTGGAAAGAT+AGG | + | chr1_2:6923525-6923544 | None:intergenic | 20.0% |
| !! | TGAAGTGAAAAATAAAAACT+TGG | + | chr1_2:6923534-6923553 | None:intergenic | 20.0% |
| !!! | GTTTTGTATTTGATTTTTGT+AGG | - | chr1_2:6923826-6923845 | Msa0052630:intron | 20.0% |
| !!! | TAGTGTAACATTTTAAATTG+TGG | - | chr1_2:6924405-6924424 | Msa0052630:intron | 20.0% |
| !!! | AATTTATTTAAATGGTTTGG+TGG | - | chr1_2:6924597-6924616 | Msa0052630:CDS | 20.0% |
| !! | TCAATTCATTAAAACTATCA+AGG | + | chr1_2:6924763-6924782 | None:intergenic | 20.0% |
| !!! | TGATAGTTTTAATGAATTGA+AGG | - | chr1_2:6924763-6924782 | Msa0052630:CDS | 20.0% |
| !!! | AATAAGTTGCTCTAAAATTT+TGG | + | chr1_2:6924968-6924987 | None:intergenic | 20.0% |
| !! | AACCTATCTAATACTTTATT+TGG | - | chr1_2:6925034-6925053 | Msa0052630:intron | 20.0% |
| !!! | ATCCAAATAAAGTATTAGAT+AGG | + | chr1_2:6925039-6925058 | None:intergenic | 20.0% |
| !!! | GTATATTTCTATTTACTGAA+TGG | - | chr1_2:6925238-6925257 | Msa0052630:intron | 20.0% |
| !!! | GCAACTTTATGTTTTTTTAT+AGG | - | chr1_2:6925264-6925283 | Msa0052630:intron | 20.0% |
| !! | GAAAAGATCAATGTTTATAT+TGG | - | chr1_2:6925690-6925709 | Msa0052630:CDS | 20.0% |
| !!! | TTAATGTTGTTGGATTATTT+TGG | - | chr1_2:6925840-6925859 | Msa0052630:intron | 20.0% |
| !!! | TAATGTTGTTGGATTATTTT+GGG | - | chr1_2:6925841-6925860 | Msa0052630:intron | 20.0% |
| !! | TTGTAGTTTATCTAAATTAG+AGG | - | chr1_2:6926139-6926158 | Msa0052630:intron | 20.0% |
| !! | CAGGAAGAATTATAATAAAA+TGG | + | chr1_2:6926305-6926324 | None:intergenic | 20.0% |
| !!! | CATTTTATTATAATTCTTCC+TGG | - | chr1_2:6926303-6926322 | Msa0052630:intron | 20.0% |
| !! | AATTTCCAAATTGGTTAATT+TGG | - | chr1_2:6926757-6926776 | Msa0052630:intron | 20.0% |
| !! | TATAACCAAATTAACCAATT+TGG | + | chr1_2:6926765-6926784 | None:intergenic | 20.0% |
| !! | TAGGTCAAATTTGAAAAATT+AGG | + | chr1_2:6927587-6927606 | None:intergenic | 20.0% |
| !!! | TTTTATATATTGCCTTCATA+TGG | - | chr1_2:6928254-6928273 | Msa0052630:intron | 20.0% |
| !!! | GATTTTGTTAAACTAAGAAT+GGG | + | chr1_2:6928292-6928311 | None:intergenic | 20.0% |
| !!! | AGATTTTGTTAAACTAAGAA+TGG | + | chr1_2:6928293-6928312 | None:intergenic | 20.0% |
| !! | TTAGTTTAACAAAATCTAAC+TGG | - | chr1_2:6928296-6928315 | Msa0052630:intron | 20.0% |
| ! | TTTGTTCTTCTAATTGATTG+AGG | - | chr1_2:6923350-6923369 | Msa0052630:three_prime_UTR | 25.0% |
| !!! | TAGATTTTTTGGTATGTCTT+TGG | - | chr1_2:6923395-6923414 | Msa0052630:exon | 25.0% |
| ! | ATATGGGTAAGTTTCAATTT+GGG | - | chr1_2:6923477-6923496 | Msa0052630:intron | 25.0% |
| !!! | TTGTATTTGATTTTTGTAGG+TGG | - | chr1_2:6923829-6923848 | Msa0052630:intron | 25.0% |
| !! | TTATGATGATGATCTTAAAC+AGG | - | chr1_2:6924026-6924045 | Msa0052630:intron | 25.0% |
| !! | AAATCAATGTTTTCTCAAGA+GGG | - | chr1_2:6924176-6924195 | Msa0052630:intron | 25.0% |
| ! | ATATTGAAACATCATGTATC+TGG | - | chr1_2:6924376-6924395 | Msa0052630:intron | 25.0% |
| ! | AAAGAAAATGAATAGAAAGG+AGG | + | chr1_2:6924507-6924526 | None:intergenic | 25.0% |
| ! | AGGAAAGAAAATGAATAGAA+AGG | + | chr1_2:6924510-6924529 | None:intergenic | 25.0% |
| !! | TTTCTATTCATTTTCTTTCC+TGG | - | chr1_2:6924509-6924528 | Msa0052630:intron | 25.0% |
| ! | TTGAACAAAGTTATTGTATC+AGG | + | chr1_2:6924579-6924598 | None:intergenic | 25.0% |
| ! | GAATTGAAGGATATAGATTA+TGG | - | chr1_2:6924776-6924795 | Msa0052630:CDS | 25.0% |
| !!! | AATTTTGTTTTTGAACTGCA+TGG | - | chr1_2:6925088-6925107 | Msa0052630:intron | 25.0% |
| !!! | TTTTCATCATTGGCTTAATA+GGG | + | chr1_2:6925675-6925694 | None:intergenic | 25.0% |
| !! | AACATTGATCTTTTCATCAT+TGG | + | chr1_2:6925685-6925704 | None:intergenic | 25.0% |
| ! | TTGATGCTAATTAATGTTGT+TGG | - | chr1_2:6925830-6925849 | Msa0052630:intron | 25.0% |
| ! | AATTTAACAGTTGCTTATTC+TGG | - | chr1_2:6925988-6926007 | Msa0052630:intron | 25.0% |
| ! | ATTTAACAGTTGCTTATTCT+GGG | - | chr1_2:6925989-6926008 | Msa0052630:intron | 25.0% |
| !!! | GTTGACTTTTGTATTTTATC+AGG | - | chr1_2:6926373-6926392 | Msa0052630:intron | 25.0% |
| ! | AACGATTATATACCTTTGTA+GGG | + | chr1_2:6926456-6926475 | None:intergenic | 25.0% |
| ! | TGGATCATTGTTTCATAATT+TGG | - | chr1_2:6926703-6926722 | Msa0052630:intron | 25.0% |
| ! | TTACGAGTTACTATTGTTTA+TGG | - | chr1_2:6926860-6926879 | Msa0052630:intron | 25.0% |
| ! | AGTTACTATTGTTTATGGAA+TGG | - | chr1_2:6926865-6926884 | Msa0052630:intron | 25.0% |
| !!! | AAGAGAAAAAGGTTTTGATT+TGG | - | chr1_2:6927080-6927099 | Msa0052630:intron | 25.0% |
| ! | TTCGTATAAATATAGAGCAT+TGG | - | chr1_2:6927137-6927156 | Msa0052630:intron | 25.0% |
| ! | ATGTAGTTAGATAAGTTTCT+AGG | - | chr1_2:6927195-6927214 | Msa0052630:intron | 25.0% |
| ! | CTAACTACATAACTTTACAT+GGG | - | chr1_2:6927325-6927344 | Msa0052630:intron | 25.0% |
| ! | AGTATCAATGCTACATATAT+AGG | + | chr1_2:6927606-6927625 | None:intergenic | 25.0% |
| ! | TCTATCACAAAATCAAAGAA+GGG | - | chr1_2:6927919-6927938 | Msa0052630:CDS | 25.0% |
| ! | TGTTTGGAAAAAAAAGTTGA+TGG | - | chr1_2:6928065-6928084 | Msa0052630:intron | 25.0% |
| ! | CTTTGATATATTTCAAGACA+TGG | - | chr1_2:6928332-6928351 | Msa0052630:intron | 25.0% |
| ! | AGATTTATGCATCCATTATA+AGG | + | chr1_2:6928387-6928406 | None:intergenic | 25.0% |
| ! | TGAACTAATGTTATGTTCAA+AGG | - | chr1_2:6928875-6928894 | Msa0052630:CDS | 25.0% |
| !!! | TGTTCAAAGGTATTTAGAAA+AGG | - | chr1_2:6928888-6928907 | Msa0052630:CDS | 25.0% |
| !! | TAAGGTTAGTTAAACAATAG+AGG | + | chr1_2:6928930-6928949 | None:intergenic | 25.0% |
| ! | TCAAAACAAAGTATAGTCAA+TGG | + | chr1_2:6928981-6929000 | None:intergenic | 25.0% |
| TCACACGGTAAACAAAAAAA+CGG | - | chr1_2:6923128-6923147 | Msa0052630:three_prime_UTR | 30.0% | |
| ! | TGATTGATGATAGAGACAAA+CGG | + | chr1_2:6923277-6923296 | None:intergenic | 30.0% |
| TTGTCTCTATCATCAATCAA+AGG | - | chr1_2:6923278-6923297 | Msa0052630:three_prime_UTR | 30.0% | |
| ACAAAATCGCACCAAAAAAT+GGG | + | chr1_2:6923335-6923354 | None:intergenic | 30.0% | |
| AACAAAATCGCACCAAAAAA+TGG | + | chr1_2:6923336-6923355 | None:intergenic | 30.0% | |
| TTTGAAAATACCATTTGGCA+TGG | - | chr1_2:6923449-6923468 | Msa0052630:CDS | 30.0% | |
| GATATGGGTAAGTTTCAATT+TGG | - | chr1_2:6923476-6923495 | Msa0052630:intron | 30.0% | |
| CAGCAATAGAGAAAATCAAA+AGG | + | chr1_2:6923639-6923658 | None:intergenic | 30.0% | |
| AGATCATTAGGATCATCTTA+GGG | - | chr1_2:6923714-6923733 | Msa0052630:intron | 30.0% | |
| ! | AGGCTCTGATATTCAAAATT+TGG | + | chr1_2:6923945-6923964 | None:intergenic | 30.0% |
| TTGATGAATGTGAAACTAGA+TGG | - | chr1_2:6924070-6924089 | Msa0052630:intron | 30.0% | |
| ! | CAAATCAATGTTTTCTCAAG+AGG | - | chr1_2:6924175-6924194 | Msa0052630:intron | 30.0% |
| AGCAATTCTCTGTTATATCA+CGG | + | chr1_2:6924443-6924462 | None:intergenic | 30.0% | |
| AAAAGTTAATGTATCAGAGC+TGG | + | chr1_2:6924555-6924574 | None:intergenic | 30.0% | |
| ! | TAAACAACTTCCTGATGTTT+TGG | + | chr1_2:6924638-6924657 | None:intergenic | 30.0% |
| AAACATCAGGAAGTTGTTTA+AGG | - | chr1_2:6924638-6924657 | Msa0052630:CDS | 30.0% | |
| !! | CAAATCTCTGTTAGTTTGTA+AGG | - | chr1_2:6924799-6924818 | Msa0052630:CDS | 30.0% |
| ! | AAATTCTACTGTTGGTGAAT+AGG | + | chr1_2:6924928-6924947 | None:intergenic | 30.0% |
| ! | TCACCAACAGTAGAATTTTA+TGG | - | chr1_2:6924930-6924949 | Msa0052630:intron | 30.0% |
| ATGCCATAAAATTCTACTGT+TGG | + | chr1_2:6924936-6924955 | None:intergenic | 30.0% | |
| AAGTGTATAGTAACAAAGAG+CGG | - | chr1_2:6925215-6925234 | Msa0052630:intron | 30.0% | |
| ! | AGTAAGTTATGTTAGTTTCC+CGG | - | chr1_2:6925295-6925314 | Msa0052630:intron | 30.0% |
| TAATCTCAAATGCATTATGC+AGG | - | chr1_2:6925434-6925453 | Msa0052630:intron | 30.0% | |
| AAATGCATTATGCAGGTATA+CGG | - | chr1_2:6925441-6925460 | Msa0052630:intron | 30.0% | |
| ! | TGACATATTGCTTCTAAAGA+AGG | + | chr1_2:6925555-6925574 | None:intergenic | 30.0% |
| !!! | CTTTTCATCATTGGCTTAAT+AGG | + | chr1_2:6925676-6925695 | None:intergenic | 30.0% |
| !! | TGTTTGTGCGCTTTTAAAAA+AGG | - | chr1_2:6925753-6925772 | Msa0052630:intron | 30.0% |
| ! | TGATTTTCTGATTCTGATTC+TGG | - | chr1_2:6925877-6925896 | Msa0052630:intron | 30.0% |
| ! | GATTTTCTGATTCTGATTCT+GGG | - | chr1_2:6925878-6925897 | Msa0052630:intron | 30.0% |
| ATGGACAATGAATTTGAGAA+TGG | - | chr1_2:6925923-6925942 | Msa0052630:intron | 30.0% | |
| AGTGGTTCAATTAATTCACA+TGG | - | chr1_2:6926096-6926115 | Msa0052630:intron | 30.0% | |
| GAACGATTATATACCTTTGT+AGG | + | chr1_2:6926457-6926476 | None:intergenic | 30.0% | |
| TTTCAGAACTTACCTCTTAA+GGG | + | chr1_2:6926622-6926641 | None:intergenic | 30.0% | |
| GATAGCTTATGAAAGTTACT+TGG | + | chr1_2:6926730-6926749 | None:intergenic | 30.0% | |
| TTGCTTCTACAGACAAAAAT+GGG | + | chr1_2:6926947-6926966 | None:intergenic | 30.0% | |
| ATTGCTTCTACAGACAAAAA+TGG | + | chr1_2:6926948-6926967 | None:intergenic | 30.0% | |
| ATATTCGAGTATAAACCAGT+TGG | - | chr1_2:6927021-6927040 | Msa0052630:intron | 30.0% | |
| !! | TAGAGCATTGGAAAAATTTG+AGG | - | chr1_2:6927149-6927168 | Msa0052630:intron | 30.0% |
| ATTTGAGGAGAAGCAAATAA+AGG | - | chr1_2:6927164-6927183 | Msa0052630:intron | 30.0% | |
| !! | TATTAGAGCTTTGTTAACCA+TGG | - | chr1_2:6927299-6927318 | Msa0052630:intron | 30.0% |
| GCTAACTACATAACTTTACA+TGG | - | chr1_2:6927324-6927343 | Msa0052630:intron | 30.0% | |
| TAGAATTCAGAAGAAGAATC+AGG | - | chr1_2:6927386-6927405 | Msa0052630:CDS | 30.0% | |
| CACGTGTTAGTAAATACAAT+TGG | - | chr1_2:6927791-6927810 | Msa0052630:intron | 30.0% | |
| GTCTATCACAAAATCAAAGA+AGG | - | chr1_2:6927918-6927937 | Msa0052630:CDS | 30.0% | |
| ATGTTCTTGATACCATATGA+AGG | + | chr1_2:6928269-6928288 | None:intergenic | 30.0% | |
| AATTCTACTTATAAGGCCTT+AGG | + | chr1_2:6928435-6928454 | None:intergenic | 30.0% | |
| GCTGCATAATTCTACTTATA+AGG | + | chr1_2:6928442-6928461 | None:intergenic | 30.0% | |
| CTATATGCTCATGCTATATA+AGG | + | chr1_2:6928517-6928536 | None:intergenic | 30.0% | |
| AATGATACATGATCGAACTA+TGG | + | chr1_2:6928589-6928608 | None:intergenic | 30.0% | |
| !!! | TCATCTTGTTTTGTAGATGA+TGG | - | chr1_2:6928627-6928646 | Msa0052630:intron | 30.0% |
| !!! | ATACACCTGTGTTTTAATGT+TGG | - | chr1_2:6928743-6928762 | Msa0052630:intron | 30.0% |
| TGATACCAACATTAAAACAC+AGG | + | chr1_2:6928751-6928770 | None:intergenic | 30.0% | |
| TAAACAATAGAGGACATCAA+TGG | + | chr1_2:6928920-6928939 | None:intergenic | 30.0% | |
| ! | TTGGTGAGTATTGTGAAATA+AGG | + | chr1_2:6928948-6928967 | None:intergenic | 30.0% |
| ACAAAGTATAGTCAATGGAA+AGG | + | chr1_2:6928976-6928995 | None:intergenic | 30.0% | |
| !!! | GTTTTTTTGTTTACCGTGTG+AGG | + | chr1_2:6923129-6923148 | None:intergenic | 35.0% |
| CACACGGTAAACAAAAAAAC+GGG | - | chr1_2:6923129-6923148 | Msa0052630:three_prime_UTR | 35.0% | |
| ! | AAGAAGAAAATGGTGGAGAT+TGG | + | chr1_2:6923216-6923235 | None:intergenic | 35.0% |
| ACTGAGAAAGAAGAAAATGG+TGG | + | chr1_2:6923223-6923242 | None:intergenic | 35.0% | |
| CACACTGAGAAAGAAGAAAA+TGG | + | chr1_2:6923226-6923245 | None:intergenic | 35.0% | |
| CTCTATCATCAATCAAAGGT+TGG | - | chr1_2:6923282-6923301 | Msa0052630:three_prime_UTR | 35.0% | |
| ATTTGGCATGGATCAGATAT+GGG | - | chr1_2:6923461-6923480 | Msa0052630:intron | 35.0% | |
| ! | GTTTCAATTTGGGATGTTAC+TGG | - | chr1_2:6923487-6923506 | Msa0052630:intron | 35.0% |
| CAAAAGTCCTACAGATCATT+AGG | - | chr1_2:6923702-6923721 | Msa0052630:intron | 35.0% | |
| AGATGATCCTAATGATCTGT+AGG | + | chr1_2:6923712-6923731 | None:intergenic | 35.0% | |
| CAGATCATTAGGATCATCTT+AGG | - | chr1_2:6923713-6923732 | Msa0052630:intron | 35.0% | |
| GATCATTAGGATCATCTTAG+GGG | - | chr1_2:6923715-6923734 | Msa0052630:intron | 35.0% | |
| !!! | TAGGTTCTCACTTTTTACCA+AGG | + | chr1_2:6924267-6924286 | None:intergenic | 35.0% |
| CTTACCAACAAAATTGTGCA+CGG | - | chr1_2:6924319-6924338 | Msa0052630:intron | 35.0% | |
| ! | TAAACCGTGCACAATTTTGT+TGG | + | chr1_2:6924326-6924345 | None:intergenic | 35.0% |
| ! | GTGCACGGTTTAGTTTATAT+TGG | - | chr1_2:6924334-6924353 | Msa0052630:intron | 35.0% |
| CATTACATGATGCAATCTAC+AGG | - | chr1_2:6924464-6924483 | Msa0052630:intron | 35.0% | |
| ! | CTATTCATTTTCTTTCCTGG+AGG | - | chr1_2:6924512-6924531 | Msa0052630:intron | 35.0% |
| ATCAGGAAGTTGTTTAAGGA+TGG | - | chr1_2:6924642-6924661 | Msa0052630:CDS | 35.0% | |
| TTAAGGATGGCTTCATTATC+AGG | - | chr1_2:6924655-6924674 | Msa0052630:intron | 35.0% | |
| !! | ATCTCTGTTAGTTTGTAAGG+TGG | - | chr1_2:6924802-6924821 | Msa0052630:CDS | 35.0% |
| TTAGTTGTGCTGAGTATTCT+AGG | - | chr1_2:6924876-6924895 | Msa0052630:CDS | 35.0% | |
| ! | TCAACCCTATTTGAAGTGTA+TGG | - | chr1_2:6924989-6925008 | Msa0052630:intron | 35.0% |
| CACTCCATACACTTCAAATA+GGG | + | chr1_2:6924996-6925015 | None:intergenic | 35.0% | |
| ! | TCTTATTTACAGATGTGTCG+TGG | - | chr1_2:6925145-6925164 | Msa0052630:intron | 35.0% |
| AGTGTATAGTAACAAAGAGC+GGG | - | chr1_2:6925216-6925235 | Msa0052630:intron | 35.0% | |
| ! | GAGTTTAAAGTCAGAGATCT+CGG | + | chr1_2:6925328-6925347 | None:intergenic | 35.0% |
| ! | GACGTTGTATTTGACTTCAT+TGG | - | chr1_2:6925487-6925506 | Msa0052630:intron | 35.0% |
| !! | AGCACTGATAGAAATAGTGA+AGG | + | chr1_2:6925626-6925645 | None:intergenic | 35.0% |
| GGTAAGAGTGAAAAGAAATG+AGG | + | chr1_2:6925654-6925673 | None:intergenic | 35.0% | |
| ACAAGCAACTTCTGATATGA+TGG | - | chr1_2:6925946-6925965 | Msa0052630:intron | 35.0% | |
| TGTGATTTCAGTCCTTTATC+TGG | - | chr1_2:6926029-6926048 | Msa0052630:CDS | 35.0% | |
| ATTTCAGTCCTTTATCTGGA+AGG | - | chr1_2:6926033-6926052 | Msa0052630:CDS | 35.0% | |
| AGTAAACACCTTCCAGATAA+AGG | + | chr1_2:6926044-6926063 | None:intergenic | 35.0% | |
| TACTATGAGAGAGAGAGAAA+TGG | - | chr1_2:6926060-6926079 | Msa0052630:CDS | 35.0% | |
| AATGGAAGGACAATAGAAAG+TGG | - | chr1_2:6926078-6926097 | Msa0052630:intron | 35.0% | |
| TCTTCCTGGATCTTCATTTA+TGG | - | chr1_2:6926317-6926336 | Msa0052630:intron | 35.0% | |
| ! | CTTGTCATTTGTCCAATGAT+CGG | - | chr1_2:6926486-6926505 | Msa0052630:intron | 35.0% |
| ATTTGTCCAATGATCGGAAA+TGG | - | chr1_2:6926492-6926511 | Msa0052630:intron | 35.0% | |
| GATATTCCATTTCCGATCAT+TGG | + | chr1_2:6926501-6926520 | None:intergenic | 35.0% | |
| ATTGCACTTGCAGTTCATAT+TGG | - | chr1_2:6926548-6926567 | Msa0052630:intron | 35.0% | |
| GTTTCAGAACTTACCTCTTA+AGG | + | chr1_2:6926623-6926642 | None:intergenic | 35.0% | |
| ACAATGATCCATCAGTAAGT+AGG | + | chr1_2:6926694-6926713 | None:intergenic | 35.0% | |
| CTATTGTTTATGGAATGGCT+AGG | - | chr1_2:6926870-6926889 | Msa0052630:intron | 35.0% | |
| CTAACTACGAGGATTATTCA+GGG | - | chr1_2:6926901-6926920 | Msa0052630:CDS | 35.0% | |
| TAACTACGAGGATTATTCAG+GGG | - | chr1_2:6926902-6926921 | Msa0052630:CDS | 35.0% | |
| TGCTTCTACAGACAAAAATG+GGG | + | chr1_2:6926946-6926965 | None:intergenic | 35.0% | |
| TGCAATATGGGAAGAGAAAA+AGG | - | chr1_2:6927069-6927088 | Msa0052630:intron | 35.0% | |
| ! | ACCTGATTGTTTAGAGTTGA+AGG | - | chr1_2:6927230-6927249 | Msa0052630:intron | 35.0% |
| ! | ATTGTTTAGAGTTGAAGGCT+TGG | - | chr1_2:6927235-6927254 | Msa0052630:intron | 35.0% |
| ACTACATAACTTTACATGGG+AGG | - | chr1_2:6927328-6927347 | Msa0052630:intron | 35.0% | |
| ACTTTACATGGGAGGATTAA+AGG | - | chr1_2:6927336-6927355 | Msa0052630:intron | 35.0% | |
| GGATGCAGTTATAACAACAA+TGG | - | chr1_2:6927418-6927437 | Msa0052630:CDS | 35.0% | |
| !! | TGGTATTCAGTTGATGATGT+TGG | - | chr1_2:6927438-6927457 | Msa0052630:CDS | 35.0% |
| !! | AGTTGATGATGTTGGTTCTT+TGG | - | chr1_2:6927446-6927465 | Msa0052630:CDS | 35.0% |
| GAACAGATTAAACTGTCAGA+AGG | - | chr1_2:6927852-6927871 | Msa0052630:CDS | 35.0% | |
| CTGACTAAGATGAACATGTT+TGG | - | chr1_2:6928049-6928068 | Msa0052630:intron | 35.0% | |
| !!! | AAAGTTGATGGTTTTGCACA+TGG | - | chr1_2:6928077-6928096 | Msa0052630:CDS | 35.0% |
| TTCACCTTTGCTTAGTTTCA+AGG | - | chr1_2:6928146-6928165 | Msa0052630:intron | 35.0% | |
| GAAATGCATAACAGAAACTG+TGG | - | chr1_2:6928354-6928373 | Msa0052630:intron | 35.0% | |
| ATGAGCATATAGATCAGTAG+TGG | - | chr1_2:6928525-6928544 | Msa0052630:intron | 35.0% | |
| !!! | CTTGTTTTGTAGATGATGGT+AGG | - | chr1_2:6928631-6928650 | Msa0052630:intron | 35.0% |
| AACCAACTGTTGCAGATATT+AGG | + | chr1_2:6928657-6928676 | None:intergenic | 35.0% | |
| AAAAAACCACGCATGTGTAT+TGG | - | chr1_2:6928684-6928703 | Msa0052630:intron | 35.0% | |
| !!! | TGCTTGCATGTCCCATTTTT+TGG | - | chr1_2:6923321-6923340 | Msa0052630:three_prime_UTR | 40.0% |
| CATATCTGATCCATGCCAAA+TGG | + | chr1_2:6923462-6923481 | None:intergenic | 40.0% | |
| CATTTGGCATGGATCAGATA+TGG | - | chr1_2:6923460-6923479 | Msa0052630:intron | 40.0% | |
| TTTAATCGCAGCTCGATCAT+AGG | + | chr1_2:6923965-6923984 | None:intergenic | 40.0% | |
| ATCGAGCTGCGATTAAATTC+AGG | - | chr1_2:6923968-6923987 | Msa0052630:intron | 40.0% | |
| TCGAGCTGCGATTAAATTCA+GGG | - | chr1_2:6923969-6923988 | Msa0052630:intron | 40.0% | |
| TGATGCAATCTACAGGATGA+TGG | - | chr1_2:6924471-6924490 | Msa0052630:intron | 40.0% | |
| ! | TTTTCTTTCCTGGAGGATGA+TGG | - | chr1_2:6924519-6924538 | Msa0052630:intron | 40.0% |
| AATGTATCAGAGCTGGAACA+GGG | + | chr1_2:6924548-6924567 | None:intergenic | 40.0% | |
| TAATGTATCAGAGCTGGAAC+AGG | + | chr1_2:6924549-6924568 | None:intergenic | 40.0% | |
| GATAGGGAGTGAATCTTAGT+TGG | + | chr1_2:6924684-6924703 | None:intergenic | 40.0% | |
| AAGGGACGTCATTCTAGATA+TGG | - | chr1_2:6924735-6924754 | Msa0052630:intron | 40.0% | |
| GCACTCCATACACTTCAAAT+AGG | + | chr1_2:6924997-6925016 | None:intergenic | 40.0% | |
| ! | AGGTTTGATCTGGCATTTTG+TGG | - | chr1_2:6925526-6925545 | Msa0052630:CDS | 40.0% |
| TAGCAAACTGTGAAGTGATG+AGG | - | chr1_2:6925577-6925596 | Msa0052630:intron | 40.0% | |
| TCATTCGTGGAGCAAATTAC+AGG | + | chr1_2:6925787-6925806 | None:intergenic | 40.0% | |
| ATGAGAGAGAGAGAAATGGA+AGG | - | chr1_2:6926064-6926083 | Msa0052630:intron | 40.0% | |
| GTTGCCATAAATGAAGATCC+AGG | + | chr1_2:6926324-6926343 | None:intergenic | 40.0% | |
| ! | AAATGTTTCTGCAAGCTGTG+CGG | + | chr1_2:6926419-6926438 | None:intergenic | 40.0% |
| TGTTGCAAAATGCCCTACAA+AGG | - | chr1_2:6926441-6926460 | Msa0052630:intron | 40.0% | |
| ACTTGCAGTTCATATTGGCA+TGG | - | chr1_2:6926553-6926572 | Msa0052630:intron | 40.0% | |
| GCAAAATCAGGCTCTACTAT+TGG | - | chr1_2:6926585-6926604 | Msa0052630:intron | 40.0% | |
| !! | GCATTGATTCTTCCCTTAAG+AGG | - | chr1_2:6926607-6926626 | Msa0052630:CDS | 40.0% |
| GCTAACTACGAGGATTATTC+AGG | - | chr1_2:6926900-6926919 | Msa0052630:CDS | 40.0% | |
| CAGGGGATAAGAATTATCAG+AGG | - | chr1_2:6926919-6926938 | Msa0052630:CDS | 40.0% | |
| TCGAGTATAAACCAGTTGGT+TGG | - | chr1_2:6927025-6927044 | Msa0052630:intron | 40.0% | |
| TCTTGATACATCCAACCAAC+TGG | + | chr1_2:6927039-6927058 | None:intergenic | 40.0% | |
| !! | AGAGAGAGCATTGTGCAATA+TGG | - | chr1_2:6927056-6927075 | Msa0052630:intron | 40.0% |
| !! | GAGAGAGCATTGTGCAATAT+GGG | - | chr1_2:6927057-6927076 | Msa0052630:intron | 40.0% |
| GCCTTCAACTCTAAACAATC+AGG | + | chr1_2:6927234-6927253 | None:intergenic | 40.0% | |
| !! | TAGAGCTTTGTTAACCATGG+AGG | - | chr1_2:6927302-6927321 | Msa0052630:intron | 40.0% |
| ! | AGTTATGTAGTTAGCCTCCA+TGG | + | chr1_2:6927319-6927338 | None:intergenic | 40.0% |
| GAGGATTAAAGGTAAGTGCT+TGG | - | chr1_2:6927347-6927366 | Msa0052630:intron | 40.0% | |
| !! | AGAAGAATCAGGTTGACTGT+TGG | - | chr1_2:6927397-6927416 | Msa0052630:intron | 40.0% |
| ACTCTTGAGGTAAGCATCTT+CGG | - | chr1_2:6927536-6927555 | Msa0052630:intron | 40.0% | |
| AGATACTTGCCTGATTCTAC+CGG | - | chr1_2:6927883-6927902 | Msa0052630:CDS | 40.0% | |
| GATAGACTTGCAGTATTTGC+CGG | + | chr1_2:6927905-6927924 | None:intergenic | 40.0% | |
| CATGCCTTGAAACTAAGCAA+AGG | + | chr1_2:6928153-6928172 | None:intergenic | 40.0% | |
| GTAATACAGCTCTTTGCCTA+AGG | - | chr1_2:6928416-6928435 | Msa0052630:intron | 40.0% | |
| GTTTCAGCAATAATGCCAAC+AGG | - | chr1_2:6928810-6928829 | Msa0052630:intron | 40.0% | |
| AGCAATAATGCCAACAGGAT+TGG | - | chr1_2:6928815-6928834 | Msa0052630:intron | 40.0% | |
| AATGATTGTGCCAATCCTGT+TGG | + | chr1_2:6928828-6928847 | None:intergenic | 40.0% | |
| AGTCAATGGAAAGGAGTCAT+TGG | + | chr1_2:6928967-6928986 | None:intergenic | 40.0% | |
| GTGGAGATTGGTGTGTTCAA+CGG | + | chr1_2:6923204-6923223 | None:intergenic | 45.0% | |
| CATTAGGATCATCTTAGGGG+TGG | - | chr1_2:6923718-6923737 | Msa0052630:intron | 45.0% | |
| CGAGCTGCGATTAAATTCAG+GGG | - | chr1_2:6923970-6923989 | Msa0052630:intron | 45.0% | |
| GCGATTAAATTCAGGGGAGT+TGG | - | chr1_2:6923976-6923995 | Msa0052630:intron | 45.0% | |
| GGAGTAACACTGCACAAATG+TGG | - | chr1_2:6924214-6924233 | Msa0052630:CDS | 45.0% | |
| ACTGCACAAATGTGGCAGTT+GGG | - | chr1_2:6924222-6924241 | Msa0052630:CDS | 45.0% | |
| CTCTGTTATATCACGGACCA+TGG | + | chr1_2:6924436-6924455 | None:intergenic | 45.0% | |
| TCTTTGCAGGCCAAAACATC+AGG | - | chr1_2:6924625-6924644 | Msa0052630:CDS | 45.0% | |
| ! | CTTCATCCCAGCTACTTTAG+CGG | + | chr1_2:6925198-6925217 | None:intergenic | 45.0% |
| AGAGATCTCGGATTTGATCC+GGG | + | chr1_2:6925316-6925335 | None:intergenic | 45.0% | |
| CAGAGATCTCGGATTTGATC+CGG | + | chr1_2:6925317-6925336 | None:intergenic | 45.0% | |
| TTAGAAGTCCCACACTACGA+AGG | + | chr1_2:6925383-6925402 | None:intergenic | 45.0% | |
| TTATGCAGGTATACGGCAGA+TGG | - | chr1_2:6925448-6925467 | Msa0052630:intron | 45.0% | |
| CAGAGAAGCTAACTCATTCG+TGG | + | chr1_2:6925800-6925819 | None:intergenic | 45.0% | |
| TGATGGCAAGCAGTCAACAA+AGG | - | chr1_2:6925963-6925982 | Msa0052630:intron | 45.0% | |
| TGGCAGCAAAGTGCAAAATC+AGG | - | chr1_2:6926573-6926592 | Msa0052630:intron | 45.0% | |
| TGCAGAAGCCTACTTACTGA+TGG | - | chr1_2:6926683-6926702 | Msa0052630:intron | 45.0% | |
| CTGAAAGCAGGAACGAAAAG+AGG | + | chr1_2:6926821-6926840 | None:intergenic | 45.0% | |
| TTCCTGCTTTCAGCTATGAG+AGG | - | chr1_2:6926828-6926847 | Msa0052630:intron | 45.0% | |
| TCCTGCTTTCAGCTATGAGA+GGG | - | chr1_2:6926829-6926848 | Msa0052630:intron | 45.0% | |
| CAGTATTTGCCGGTAGAATC+AGG | + | chr1_2:6927895-6927914 | None:intergenic | 45.0% | |
| TGTGGCGCGAATCCTTATAA+TGG | - | chr1_2:6928372-6928391 | Msa0052630:intron | 45.0% | |
| GGCCTAATATCTGCAACAGT+TGG | - | chr1_2:6928652-6928671 | Msa0052630:intron | 45.0% | |
| AAACCACGCATGTGTATTGG+TGG | - | chr1_2:6928687-6928706 | Msa0052630:intron | 45.0% | |
| AGGATCATCTTAGGGGTGGA+CGG | - | chr1_2:6923722-6923741 | Msa0052630:intron | 50.0% | |
| ACACAGCTCATGTTGCTGCT+AGG | - | chr1_2:6923857-6923876 | Msa0052630:intron | 50.0% | |
| AGAGGGAGTTCGAAGTACAG+AGG | - | chr1_2:6924193-6924212 | Msa0052630:CDS | 50.0% | |
| CACTGCACAAATGTGGCAGT+TGG | - | chr1_2:6924221-6924240 | Msa0052630:CDS | 50.0% | |
| GCTCGAATGGGTCAATTCCT+TGG | - | chr1_2:6924247-6924266 | Msa0052630:intron | 50.0% | |
| TTTAAATTGTGGCCGCGCCA+TGG | - | chr1_2:6924416-6924435 | Msa0052630:intron | 50.0% | |
| TTATATCACGGACCATGGCG+CGG | + | chr1_2:6924431-6924450 | None:intergenic | 50.0% | |
| ! | TTTGGTGGCTCTCTCTTTGC+AGG | - | chr1_2:6924612-6924631 | Msa0052630:CDS | 50.0% |
| TTCACTCCCTATCCTGTGCT+AGG | - | chr1_2:6924691-6924710 | Msa0052630:intron | 50.0% | |
| ATGAAGGAGGCCAAGAGGAA+GGG | - | chr1_2:6924717-6924736 | Msa0052630:intron | 50.0% | |
| AGAATGACGTCCCTTCCTCT+TGG | + | chr1_2:6924730-6924749 | None:intergenic | 50.0% | |
| TTACAGATGTGTCGTGGTCG+AGG | - | chr1_2:6925151-6925170 | Msa0052630:intron | 50.0% | |
| TAGCAGCCGCTAAAGTAGCT+GGG | - | chr1_2:6925189-6925208 | Msa0052630:intron | 50.0% | |
| GGTGAGCTAAGGGACATTGA+AGG | + | chr1_2:6925350-6925369 | None:intergenic | 50.0% | |
| ! | CTTCATTGGTGATCCTCCTG+AGG | - | chr1_2:6925501-6925520 | Msa0052630:CDS | 50.0% |
| AGATCAAACCTCTCCTCAGG+AGG | + | chr1_2:6925517-6925536 | None:intergenic | 50.0% | |
| TCCTGAGGAGAGGTTTGATC+TGG | - | chr1_2:6925516-6925535 | Msa0052630:CDS | 50.0% | |
| TCCCTCTCATAGCTGAAAGC+AGG | + | chr1_2:6926833-6926852 | None:intergenic | 50.0% | |
| AGGTTGTGCAGCTAACTACG+AGG | - | chr1_2:6926890-6926909 | Msa0052630:CDS | 50.0% | |
| CAGATGCTAGAGAATGAGCC+TGG | - | chr1_2:6927480-6927499 | Msa0052630:intron | 50.0% | |
| AACTCTAGCAGGCTCTTTCC+AGG | + | chr1_2:6927501-6927520 | None:intergenic | 50.0% | |
| GTCTGTCGCTACTACTCTTG+AGG | - | chr1_2:6927523-6927542 | Msa0052630:intron | 50.0% | |
| GTCGACATGATTCTCACACG+TGG | - | chr1_2:6927655-6927674 | Msa0052630:intron | 50.0% | |
| CATCCACCAATACACATGCG+TGG | + | chr1_2:6928693-6928712 | None:intergenic | 50.0% | |
| CCGTGTGAGGAGAAGAGAAC+CGG | + | chr1_2:6923116-6923135 | None:intergenic | 55.0% | |
| CCGGTTCTCTTCTCCTCACA+CGG | - | chr1_2:6923113-6923132 | Msa0052630:three_prime_UTR | 55.0% | |
| GATTGGTGTGTTCAACGGCG+AGG | + | chr1_2:6923199-6923218 | None:intergenic | 55.0% | |
| TGGCAGTTGGGAAGCTCGAA+TGG | - | chr1_2:6924234-6924253 | Msa0052630:CDS | 55.0% | |
| GGCAGTTGGGAAGCTCGAAT+GGG | - | chr1_2:6924235-6924254 | Msa0052630:CDS | 55.0% | |
| CAGGGTAACCATCATCCTCC+AGG | + | chr1_2:6924530-6924549 | None:intergenic | 55.0% | |
| CATGCGCCTAGCACAGGATA+GGG | + | chr1_2:6924700-6924719 | None:intergenic | 55.0% | |
| TCATGCGCCTAGCACAGGAT+AGG | + | chr1_2:6924701-6924720 | None:intergenic | 55.0% | |
| ATCCTGTGCTAGGCGCATGA+AGG | - | chr1_2:6924701-6924720 | Msa0052630:intron | 55.0% | |
| CATGAAGGAGGCCAAGAGGA+AGG | - | chr1_2:6924716-6924735 | Msa0052630:intron | 55.0% | |
| CTAGCAGCCGCTAAAGTAGC+TGG | - | chr1_2:6925188-6925207 | Msa0052630:intron | 55.0% | |
| !! | CAGCTCGGTTGGTGAGCTAA+GGG | + | chr1_2:6925360-6925379 | None:intergenic | 55.0% |
| ! | TTGGTGATCCTCCTGAGGAG+AGG | - | chr1_2:6925506-6925525 | Msa0052630:CDS | 55.0% |
| GCCAGATCAAACCTCTCCTC+AGG | + | chr1_2:6925520-6925539 | None:intergenic | 55.0% | |
| GCGACAGACGAAACTCTAGC+AGG | + | chr1_2:6927512-6927531 | None:intergenic | 55.0% | |
| GTGTTCAACGGCGAGGTCGA+CGG | + | chr1_2:6923192-6923211 | None:intergenic | 60.0% | |
| CTCCTTCATGCGCCTAGCAC+AGG | + | chr1_2:6924706-6924725 | None:intergenic | 60.0% | |
| CTGTGCTAGGCGCATGAAGG+AGG | - | chr1_2:6924704-6924723 | Msa0052630:intron | 60.0% | |
| GTGGTCGAGGACAGCGCTAT+AGG | - | chr1_2:6925164-6925183 | Msa0052630:intron | 60.0% | |
| !! | GCAGCTCGGTTGGTGAGCTA+AGG | + | chr1_2:6925361-6925380 | None:intergenic | 60.0% |
| CACTACGAAGGCAGCTCGGT+TGG | + | chr1_2:6925371-6925390 | None:intergenic | 60.0% | |
| ACCGAGCTGCCTTCGTAGTG+TGG | - | chr1_2:6925371-6925390 | Msa0052630:intron | 60.0% | |
| CCCACACTACGAAGGCAGCT+CGG | + | chr1_2:6925375-6925394 | None:intergenic | 60.0% | |
| CCGAGCTGCCTTCGTAGTGT+GGG | - | chr1_2:6925372-6925391 | Msa0052630:intron | 60.0% | |
| TTCAACGGCGAGGTCGACGG+AGG | + | chr1_2:6923189-6923208 | None:intergenic | 65.0% | |
| GGCGCATGAAGGAGGCCAAG+AGG | - | chr1_2:6924712-6924731 | Msa0052630:intron | 65.0% | |
| ! | GACGGCAAGGTGGCGGTGTG+AGG | + | chr1_2:6923165-6923184 | None:intergenic | 70.0% |
| CGGAGGAGACGGCAAGGTGG+CGG | + | chr1_2:6923172-6923191 | None:intergenic | 70.0% | |
| CGACGGAGGAGACGGCAAGG+TGG | + | chr1_2:6923175-6923194 | None:intergenic | 70.0% | |
| GGTCGACGGAGGAGACGGCA+AGG | + | chr1_2:6923178-6923197 | None:intergenic | 70.0% | |
| GGCGAGGTCGACGGAGGAGA+CGG | + | chr1_2:6923183-6923202 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 6923107 | 6929013 | 6923107 | ID=Msa0052630;Name=Msa0052630 |
| chr1_2 | mRNA | 6923107 | 6929013 | 6923107 | ID=Msa0052630-mRNA-1;Parent=Msa0052630;Name=Msa0052630-mRNA-1;_AED=0.22;_eAED=0.22;_QI=0|0.38|0.47|1|0.77|0.84|19|300|480 |
| chr1_2 | exon | 6923107 | 6923477 | 6923107 | ID=Msa0052630-mRNA-1:exon:2368;Parent=Msa0052630-mRNA-1 |
| chr1_2 | exon | 6924180 | 6924262 | 6924180 | ID=Msa0052630-mRNA-1:exon:2367;Parent=Msa0052630-mRNA-1 |
| chr1_2 | exon | 6924576 | 6924672 | 6924576 | ID=Msa0052630-mRNA-1:exon:2366;Parent=Msa0052630-mRNA-1 |
| chr1_2 | exon | 6924763 | 6924919 | 6924763 | ID=Msa0052630-mRNA-1:exon:2365;Parent=Msa0052630-mRNA-1 |
| chr1_2 | exon | 6925390 | 6925432 | 6925390 | ID=Msa0052630-mRNA-1:exon:2364;Parent=Msa0052630-mRNA-1 |
| chr1_2 | exon | 6925492 | 6925559 | 6925492 | ID=Msa0052630-mRNA-1:exon:2363;Parent=Msa0052630-mRNA-1 |
| chr1_2 | exon | 6925658 | 6925725 | 6925658 | ID=Msa0052630-mRNA-1:exon:2362;Parent=Msa0052630-mRNA-1 |
| chr1_2 | exon | 6926003 | 6926080 | 6926003 | ID=Msa0052630-mRNA-1:exon:2361;Parent=Msa0052630-mRNA-1 |
| chr1_2 | exon | 6926146 | 6926197 | 6926146 | ID=Msa0052630-mRNA-1:exon:2360;Parent=Msa0052630-mRNA-1 |
| chr1_2 | exon | 6926367 | 6926373 | 6926367 | ID=Msa0052630-mRNA-1:exon:2359;Parent=Msa0052630-mRNA-1 |
| chr1_2 | exon | 6926593 | 6926664 | 6926593 | ID=Msa0052630-mRNA-1:exon:2358;Parent=Msa0052630-mRNA-1 |
| chr1_2 | exon | 6926883 | 6926963 | 6926883 | ID=Msa0052630-mRNA-1:exon:2357;Parent=Msa0052630-mRNA-1 |
| chr1_2 | exon | 6927379 | 6927407 | 6927379 | ID=Msa0052630-mRNA-1:exon:2356;Parent=Msa0052630-mRNA-1 |
| chr1_2 | exon | 6927415 | 6927486 | 6927415 | ID=Msa0052630-mRNA-1:exon:2355;Parent=Msa0052630-mRNA-1 |
| chr1_2 | exon | 6927628 | 6927634 | 6927628 | ID=Msa0052630-mRNA-1:exon:2354;Parent=Msa0052630-mRNA-1 |
| chr1_2 | exon | 6927845 | 6927990 | 6927845 | ID=Msa0052630-mRNA-1:exon:2353;Parent=Msa0052630-mRNA-1 |
| chr1_2 | exon | 6928073 | 6928160 | 6928073 | ID=Msa0052630-mRNA-1:exon:2352;Parent=Msa0052630-mRNA-1 |
| chr1_2 | exon | 6928242 | 6928272 | 6928242 | ID=Msa0052630-mRNA-1:exon:2351;Parent=Msa0052630-mRNA-1 |
| chr1_2 | exon | 6928821 | 6929013 | 6928821 | ID=Msa0052630-mRNA-1:exon:2350;Parent=Msa0052630-mRNA-1 |
| chr1_2 | CDS | 6928821 | 6929013 | 6928821 | ID=Msa0052630-mRNA-1:cds;Parent=Msa0052630-mRNA-1 |
| chr1_2 | CDS | 6928242 | 6928272 | 6928242 | ID=Msa0052630-mRNA-1:cds;Parent=Msa0052630-mRNA-1 |
| chr1_2 | CDS | 6928073 | 6928160 | 6928073 | ID=Msa0052630-mRNA-1:cds;Parent=Msa0052630-mRNA-1 |
| chr1_2 | CDS | 6927845 | 6927990 | 6927845 | ID=Msa0052630-mRNA-1:cds;Parent=Msa0052630-mRNA-1 |
| chr1_2 | CDS | 6927628 | 6927634 | 6927628 | ID=Msa0052630-mRNA-1:cds;Parent=Msa0052630-mRNA-1 |
| chr1_2 | CDS | 6927415 | 6927486 | 6927415 | ID=Msa0052630-mRNA-1:cds;Parent=Msa0052630-mRNA-1 |
| chr1_2 | CDS | 6927379 | 6927407 | 6927379 | ID=Msa0052630-mRNA-1:cds;Parent=Msa0052630-mRNA-1 |
| chr1_2 | CDS | 6926883 | 6926963 | 6926883 | ID=Msa0052630-mRNA-1:cds;Parent=Msa0052630-mRNA-1 |
| chr1_2 | CDS | 6926593 | 6926664 | 6926593 | ID=Msa0052630-mRNA-1:cds;Parent=Msa0052630-mRNA-1 |
| chr1_2 | CDS | 6926367 | 6926373 | 6926367 | ID=Msa0052630-mRNA-1:cds;Parent=Msa0052630-mRNA-1 |
| chr1_2 | CDS | 6926146 | 6926197 | 6926146 | ID=Msa0052630-mRNA-1:cds;Parent=Msa0052630-mRNA-1 |
| chr1_2 | CDS | 6926003 | 6926080 | 6926003 | ID=Msa0052630-mRNA-1:cds;Parent=Msa0052630-mRNA-1 |
| chr1_2 | CDS | 6925658 | 6925725 | 6925658 | ID=Msa0052630-mRNA-1:cds;Parent=Msa0052630-mRNA-1 |
| chr1_2 | CDS | 6925492 | 6925559 | 6925492 | ID=Msa0052630-mRNA-1:cds;Parent=Msa0052630-mRNA-1 |
| chr1_2 | CDS | 6925390 | 6925432 | 6925390 | ID=Msa0052630-mRNA-1:cds;Parent=Msa0052630-mRNA-1 |
| chr1_2 | CDS | 6924763 | 6924919 | 6924763 | ID=Msa0052630-mRNA-1:cds;Parent=Msa0052630-mRNA-1 |
| chr1_2 | CDS | 6924576 | 6924672 | 6924576 | ID=Msa0052630-mRNA-1:cds;Parent=Msa0052630-mRNA-1 |
| chr1_2 | CDS | 6924180 | 6924262 | 6924180 | ID=Msa0052630-mRNA-1:cds;Parent=Msa0052630-mRNA-1 |
| chr1_2 | CDS | 6923407 | 6923477 | 6923407 | ID=Msa0052630-mRNA-1:cds;Parent=Msa0052630-mRNA-1 |
| chr1_2 | three_prime_UTR | 6923107 | 6923406 | 6923107 | ID=Msa0052630-mRNA-1:three_prime_utr;Parent=Msa0052630-mRNA-1 |
| Gene Sequence |
| Protein sequence |
