Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0067890 | RHN69572.1 | 88.750 | 80 | 9 | 0 | 76 | 155 | 47 | 126 | 3.19e-39 | 148 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0067890 | sp|B8AXC3|AP21_ORYSI | 58.779 | 131 | 46 | 1 | 65 | 187 | 198 | 328 | 4.20e-30 | 125 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0067890 | A0A396IVJ2 | 88.750 | 80 | 9 | 0 | 76 | 155 | 47 | 126 | 1.52e-39 | 148 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0001890 | Msa0067890 | 0.865223 | 6.901166e-65 | -8.615850e-47 |
Msa0052630 | Msa0067890 | 0.960876 | 4.696159e-119 | -8.615850e-47 |
Msa0067890 | Msa0221600 | 0.805652 | 1.203644e-49 | -8.615850e-47 |
Msa0067890 | Msa0337510 | 0.819527 | 1.108090e-52 | -8.615850e-47 |
Msa0067890 | Msa0403190 | 0.806335 | 8.649160e-50 | -8.615850e-47 |
Msa0067890 | Msa0414020 | 0.807135 | 5.859238e-50 | -8.615850e-47 |
Msa0067890 | Msa0659990 | 0.804844 | 1.777389e-49 | -8.615850e-47 |
Msa0067890 | Msa0662450 | 0.877072 | 8.426980e-69 | -8.615850e-47 |
Msa0067890 | Msa0704800 | 0.807444 | 5.038630e-50 | -8.615850e-47 |
Msa0067890 | Msa0791030 | 0.809007 | 2.340492e-50 | -8.615850e-47 |
Msa0067890 | Msa0940830 | 0.801366 | 9.313268e-49 | -8.615850e-47 |
Msa0067890 | Msa0987930 | 0.892280 | 1.836403e-74 | -8.615850e-47 |
Msa0067890 | Msa1253400 | 0.806196 | 9.250929e-50 | -8.615850e-47 |
Msa0067890 | Msa1253810 | 0.834196 | 3.446207e-56 | -8.615850e-47 |
Msa0067890 | Msa1325930 | 0.908307 | 1.972138e-81 | -8.615850e-47 |
Msa0067890 | Msa1408150 | 0.800478 | 1.414589e-48 | -8.615850e-47 |
Msa0067890 | Msa1447680 | 0.870802 | 1.108111e-66 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0067890 | MtrunA17_Chr3g0126151 | 88.750 | 80 | 9 | 0 | 76 | 155 | 47 | 126 | 2.93e-43 | 148 |
Msa0067890 | MtrunA17_Chr3g0105811 | 72.441 | 127 | 5 | 1 | 296 | 392 | 537 | 663 | 2.27e-37 | 145 |
Msa0067890 | MtrunA17_Chr4g0030191 | 63.235 | 136 | 42 | 1 | 65 | 192 | 158 | 293 | 5.84e-37 | 140 |
Msa0067890 | MtrunA17_Chr4g0005681 | 47.143 | 140 | 44 | 1 | 283 | 392 | 548 | 687 | 2.17e-33 | 133 |
Msa0067890 | MtrunA17_Chr7g0243131 | 48.062 | 129 | 37 | 1 | 294 | 392 | 300 | 428 | 1.45e-31 | 127 |
Msa0067890 | MtrunA17_Chr7g0263581 | 65.487 | 113 | 36 | 2 | 65 | 174 | 166 | 278 | 5.15e-30 | 121 |
Msa0067890 | MtrunA17_Chr4g0053181 | 57.037 | 135 | 50 | 1 | 65 | 191 | 203 | 337 | 9.08e-30 | 121 |
Msa0067890 | MtrunA17_Chr5g0401891 | 66.372 | 113 | 35 | 2 | 65 | 174 | 179 | 291 | 1.71e-29 | 120 |
Msa0067890 | MtrunA17_Chr2g0325911 | 73.333 | 90 | 24 | 0 | 65 | 154 | 161 | 250 | 9.03e-28 | 114 |
Msa0067890 | MtrunA17_Chr3g0116461 | 86.364 | 66 | 9 | 0 | 153 | 218 | 256 | 321 | 2.63e-27 | 111 |
Msa0067890 | MtrunA17_Chr1g0185181 | 38.621 | 145 | 55 | 2 | 278 | 392 | 484 | 624 | 5.01e-21 | 95.9 |
Msa0067890 | MtrunA17_Chr6g0452911 | 39.316 | 117 | 70 | 1 | 60 | 175 | 103 | 219 | 4.49e-19 | 88.6 |
Msa0067890 | MtrunA17_Chr4g0054351 | 45.556 | 90 | 48 | 1 | 65 | 153 | 350 | 439 | 1.23e-18 | 88.6 |
Msa0067890 | MtrunA17_Chr3g0135161 | 45.055 | 91 | 49 | 1 | 64 | 153 | 346 | 436 | 2.19e-18 | 87.8 |
Msa0067890 | MtrunA17_Chr7g0216601 | 39.286 | 112 | 67 | 1 | 65 | 175 | 105 | 216 | 2.68e-18 | 86.3 |
Msa0067890 | MtrunA17_Chr8g0367311 | 35.664 | 143 | 82 | 3 | 43 | 176 | 1 | 142 | 3.25e-18 | 84.0 |
Msa0067890 | MtrunA17_Chr8g0343851 | 37.705 | 122 | 67 | 3 | 64 | 176 | 284 | 405 | 4.34e-17 | 83.6 |
Msa0067890 | MtrunA17_Chr4g0072291 | 32.317 | 164 | 93 | 4 | 65 | 224 | 199 | 348 | 5.12e-17 | 83.2 |
Msa0067890 | MtrunA17_Chr4g0073521 | 36.567 | 134 | 76 | 2 | 64 | 196 | 83 | 208 | 7.80e-17 | 81.6 |
Msa0067890 | MtrunA17_Chr1g0152161 | 36.066 | 122 | 69 | 3 | 64 | 176 | 348 | 469 | 8.25e-17 | 82.8 |
Msa0067890 | MtrunA17_Chr8g0355191 | 38.211 | 123 | 67 | 3 | 64 | 177 | 91 | 213 | 8.88e-17 | 82.0 |
Msa0067890 | MtrunA17_Chr5g0412151 | 44.444 | 90 | 49 | 1 | 65 | 153 | 264 | 353 | 2.82e-16 | 80.9 |
Msa0067890 | MtrunA17_Chr5g0400871 | 44.444 | 90 | 49 | 1 | 65 | 153 | 289 | 378 | 2.88e-16 | 80.9 |
Msa0067890 | MtrunA17_Chr7g0249621 | 35.537 | 121 | 69 | 3 | 65 | 176 | 299 | 419 | 8.23e-16 | 79.7 |
Msa0067890 | MtrunA17_Chr2g0328971 | 29.353 | 201 | 111 | 5 | 64 | 247 | 203 | 389 | 9.15e-16 | 79.3 |
Msa0067890 | MtrunA17_Chr4g0032631 | 33.884 | 121 | 71 | 3 | 65 | 176 | 203 | 323 | 2.17e-15 | 78.2 |
Msa0067890 | MtrunA17_Chr8g0355181 | 38.938 | 113 | 68 | 1 | 64 | 175 | 92 | 204 | 1.76e-12 | 68.6 |
Msa0067890 | MtrunA17_Chr8g0362541 | 45.055 | 91 | 49 | 1 | 64 | 153 | 105 | 195 | 3.27e-12 | 67.8 |
Msa0067890 | MtrunA17_Chr4g0002011 | 35.345 | 116 | 66 | 2 | 82 | 196 | 93 | 200 | 5.27e-12 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0067890 | AT4G36920.1 | 67.257 | 113 | 34 | 2 | 65 | 174 | 158 | 270 | 7.50e-31 | 123 |
Msa0067890 | AT4G36920.2 | 67.257 | 113 | 34 | 2 | 65 | 174 | 158 | 270 | 7.50e-31 | 123 |
Msa0067890 | AT2G28550.4 | 63.393 | 112 | 41 | 0 | 65 | 176 | 180 | 291 | 3.15e-30 | 120 |
Msa0067890 | AT3G51770.2 | 45.000 | 140 | 47 | 1 | 283 | 392 | 556 | 695 | 3.16e-30 | 124 |
Msa0067890 | AT3G51770.1 | 45.000 | 140 | 47 | 1 | 283 | 392 | 548 | 687 | 3.36e-30 | 124 |
Msa0067890 | AT2G28550.5 | 75.556 | 90 | 22 | 0 | 65 | 154 | 14 | 103 | 3.53e-30 | 118 |
Msa0067890 | AT2G28550.2 | 76.404 | 89 | 21 | 0 | 65 | 153 | 180 | 268 | 5.59e-30 | 117 |
Msa0067890 | AT2G28550.6 | 76.404 | 89 | 21 | 0 | 65 | 153 | 180 | 268 | 5.59e-30 | 117 |
Msa0067890 | AT2G28550.3 | 68.571 | 105 | 31 | 1 | 65 | 167 | 180 | 284 | 4.15e-29 | 119 |
Msa0067890 | AT2G28550.1 | 75.556 | 90 | 22 | 0 | 65 | 154 | 180 | 269 | 6.38e-29 | 118 |
Msa0067890 | AT5G67180.4 | 62.069 | 116 | 41 | 2 | 65 | 178 | 123 | 237 | 2.20e-28 | 112 |
Msa0067890 | AT5G67180.3 | 63.717 | 113 | 38 | 2 | 65 | 174 | 123 | 235 | 5.50e-28 | 112 |
Msa0067890 | AT5G67180.2 | 63.717 | 113 | 38 | 2 | 65 | 174 | 123 | 235 | 8.57e-28 | 112 |
Msa0067890 | AT5G58550.1 | 44.882 | 127 | 40 | 1 | 296 | 392 | 527 | 653 | 1.15e-27 | 116 |
Msa0067890 | AT5G67180.1 | 63.717 | 113 | 38 | 2 | 65 | 174 | 123 | 235 | 1.20e-27 | 113 |
Msa0067890 | AT3G48420.1 | 89.655 | 58 | 6 | 0 | 153 | 210 | 252 | 309 | 2.77e-23 | 100 |
Msa0067890 | AT5G60120.6 | 60.920 | 87 | 34 | 0 | 65 | 151 | 187 | 273 | 3.30e-18 | 87.0 |
Msa0067890 | AT5G60120.1 | 60.920 | 87 | 34 | 0 | 65 | 151 | 187 | 273 | 3.65e-18 | 87.0 |
Msa0067890 | AT5G60120.2 | 60.920 | 87 | 34 | 0 | 65 | 151 | 187 | 273 | 4.18e-18 | 87.0 |
Msa0067890 | AT5G60120.4 | 60.920 | 87 | 34 | 0 | 65 | 151 | 187 | 273 | 4.37e-18 | 86.3 |
Msa0067890 | AT5G60120.3 | 60.920 | 87 | 34 | 0 | 65 | 151 | 187 | 273 | 4.37e-18 | 86.3 |
Msa0067890 | AT5G60120.5 | 60.920 | 87 | 34 | 0 | 65 | 151 | 187 | 273 | 4.37e-18 | 86.3 |
Msa0067890 | AT2G39250.2 | 54.167 | 72 | 33 | 0 | 65 | 136 | 135 | 206 | 1.27e-17 | 82.4 |
Msa0067890 | AT2G39250.1 | 54.167 | 72 | 33 | 0 | 65 | 136 | 135 | 206 | 2.61e-17 | 82.8 |
Msa0067890 | AT1G72570.1 | 36.364 | 121 | 68 | 3 | 65 | 176 | 260 | 380 | 1.48e-16 | 81.6 |
Msa0067890 | AT1G51190.1 | 35.537 | 121 | 69 | 3 | 65 | 176 | 227 | 347 | 1.65e-16 | 82.0 |
Msa0067890 | AT5G57390.2 | 33.121 | 157 | 87 | 4 | 65 | 217 | 122 | 264 | 1.66e-16 | 81.6 |
Msa0067890 | AT5G57390.1 | 33.121 | 157 | 87 | 4 | 65 | 217 | 240 | 382 | 1.98e-16 | 82.0 |
Msa0067890 | AT5G17430.1 | 36.364 | 121 | 68 | 3 | 65 | 176 | 247 | 367 | 5.02e-16 | 80.9 |
Msa0067890 | AT5G17430.2 | 36.364 | 121 | 68 | 3 | 65 | 176 | 185 | 305 | 5.29e-16 | 80.5 |
Msa0067890 | AT4G37750.1 | 42.222 | 90 | 51 | 1 | 65 | 153 | 320 | 409 | 1.18e-15 | 79.3 |
Msa0067890 | AT5G10510.3 | 41.237 | 97 | 56 | 1 | 58 | 153 | 318 | 414 | 1.36e-15 | 79.3 |
Msa0067890 | AT5G65510.3 | 43.333 | 90 | 50 | 1 | 65 | 153 | 210 | 299 | 1.81e-15 | 77.4 |
Msa0067890 | AT5G10510.2 | 41.758 | 91 | 52 | 1 | 64 | 153 | 263 | 353 | 2.34e-15 | 78.6 |
Msa0067890 | AT5G65510.2 | 43.333 | 90 | 50 | 1 | 65 | 153 | 268 | 357 | 2.54e-15 | 78.2 |
Msa0067890 | AT5G65510.1 | 43.333 | 90 | 50 | 1 | 65 | 153 | 268 | 357 | 2.54e-15 | 78.2 |
Msa0067890 | AT5G65510.4 | 43.333 | 90 | 50 | 1 | 65 | 153 | 210 | 299 | 2.57e-15 | 78.2 |
Msa0067890 | AT5G10510.6 | 42.222 | 90 | 51 | 1 | 65 | 153 | 305 | 394 | 3.28e-15 | 78.2 |
Msa0067890 | AT5G10510.4 | 42.222 | 90 | 51 | 1 | 65 | 153 | 305 | 394 | 3.28e-15 | 78.2 |
Msa0067890 | AT5G10510.7 | 42.222 | 90 | 51 | 1 | 65 | 153 | 267 | 356 | 3.71e-15 | 77.8 |
Msa0067890 | AT5G10510.5 | 42.222 | 90 | 51 | 1 | 65 | 153 | 267 | 356 | 3.71e-15 | 77.8 |
Msa0067890 | AT5G10510.1 | 42.222 | 90 | 51 | 1 | 65 | 153 | 290 | 379 | 3.80e-15 | 77.8 |
Msa0067890 | AT3G20840.1 | 33.884 | 121 | 71 | 3 | 65 | 176 | 218 | 338 | 4.58e-15 | 77.8 |
Msa0067890 | AT3G54320.4 | 42.222 | 90 | 51 | 1 | 65 | 153 | 36 | 125 | 6.52e-15 | 76.3 |
Msa0067890 | AT3G54320.5 | 42.222 | 90 | 51 | 1 | 65 | 153 | 36 | 125 | 6.52e-15 | 76.3 |
Msa0067890 | AT3G54320.3 | 42.222 | 90 | 51 | 1 | 65 | 153 | 102 | 191 | 7.99e-15 | 76.6 |
Msa0067890 | AT3G54320.1 | 42.222 | 90 | 51 | 1 | 65 | 153 | 102 | 191 | 8.71e-15 | 76.3 |
Msa0067890 | AT3G54990.2 | 57.500 | 80 | 34 | 0 | 65 | 144 | 149 | 228 | 2.26e-13 | 70.1 |
Msa0067890 | AT3G54990.1 | 61.333 | 75 | 29 | 0 | 65 | 139 | 149 | 223 | 5.68e-13 | 70.1 |
Msa0067890 | AT1G79700.4 | 44.681 | 94 | 51 | 1 | 65 | 157 | 7 | 100 | 2.38e-12 | 67.0 |
Msa0067890 | AT1G79700.3 | 44.681 | 94 | 51 | 1 | 65 | 157 | 13 | 106 | 2.57e-12 | 67.0 |
Msa0067890 | AT1G79700.2 | 44.681 | 94 | 51 | 1 | 65 | 157 | 89 | 182 | 7.31e-12 | 66.6 |
Msa0067890 | AT1G16060.3 | 42.105 | 76 | 43 | 1 | 83 | 157 | 43 | 118 | 2.60e-11 | 64.3 |
Msa0067890 | AT1G16060.1 | 44.444 | 72 | 39 | 1 | 83 | 153 | 113 | 184 | 5.30e-11 | 64.3 |
Find 105 sgRNAs with CRISPR-Local
Find 323 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGGATCATTGTTTCATAATT+TGG | 0.097345 | 1_2:-33194596 | Msa0067890:CDS |
ACTTTACATGGGAGGATTAA+AGG | 0.234605 | 1_2:-33193963 | Msa0067890:intron |
ATGTAGTTAGATAAGTTTCT+AGG | 0.272462 | 1_2:-33194104 | Msa0067890:intron |
TGTGATTTCAGTCCTTTATC+TGG | 0.308734 | 1_2:-33195270 | Msa0067890:intron |
AGTTGATGATGTTGGTTCTT+TGG | 0.313516 | 1_2:-33193853 | Msa0067890:CDS |
GTTTCAGAACTTACCTCTTA+AGG | 0.317681 | 1_2:+33194679 | None:intergenic |
ACCTGATTGTTTAGAGTTGA+AGG | 0.318328 | 1_2:-33194069 | Msa0067890:CDS |
GAACGATTATATACCTTTGT+AGG | 0.358428 | 1_2:+33194845 | None:intergenic |
CAGTATTTGCCGGTAGAATC+AGG | 0.358742 | 1_2:+33193407 | None:intergenic |
AACTCTAGCAGGCTCTTTCC+AGG | 0.361101 | 1_2:+33193801 | None:intergenic |
TTTCAGAACTTACCTCTTAA+GGG | 0.361709 | 1_2:+33194680 | None:intergenic |
ATTGCACTTGCAGTTCATAT+TGG | 0.363079 | 1_2:-33194751 | Msa0067890:intron |
ATCGAGCTGCGATTAAATTC+AGG | 0.379752 | 1_2:-33197331 | Msa0067890:CDS |
AGTAAACACCTTCCAGATAA+AGG | 0.389171 | 1_2:+33195258 | None:intergenic |
AAATGCATTATGCAGGTATA+CGG | 0.405222 | 1_2:-33195858 | Msa0067890:intron |
GCATTGATTCTTCCCTTAAG+AGG | 0.406835 | 1_2:-33194692 | Msa0067890:intron |
GATAGACTTGCAGTATTTGC+CGG | 0.410071 | 1_2:+33193397 | None:intergenic |
GACGTTGTATTTGACTTCAT+TGG | 0.414112 | 1_2:-33195812 | Msa0067890:CDS |
TTCCTTCTTCTTCTTCAGTC+CGG | 0.423114 | 1_2:-33198204 | None:intergenic |
CACACTGAGAAAGAAGAAAA+TGG | 0.425666 | 1_2:+33198075 | None:intergenic |
TTGGTGAGTATTGTGAAATA+AGG | 0.427114 | 1_2:+33192354 | None:intergenic |
GCAAAATCAGGCTCTACTAT+TGG | 0.434597 | 1_2:-33194714 | Msa0067890:CDS |
AGCAATAATGCCAACAGGAT+TGG | 0.436526 | 1_2:-33192484 | Msa0067890:three_prime_UTR |
TTATGATGATGATCTTAAAC+AGG | 0.440099 | 1_2:-33197273 | Msa0067890:intron |
TTTAATCGCAGCTCGATCAT+AGG | 0.441826 | 1_2:+33197337 | None:intergenic |
AACCAACTGTTGCAGATATT+AGG | 0.442398 | 1_2:+33192645 | None:intergenic |
CTAGCAGCCGCTAAAGTAGC+TGG | 0.453585 | 1_2:-33196111 | Msa0067890:CDS |
TGGCAGCAAAGTGCAAAATC+AGG | 0.459814 | 1_2:-33194726 | Msa0067890:CDS |
TGTTCAAAGGTATTTAGAAA+AGG | 0.464068 | 1_2:-33192411 | Msa0067890:three_prime_UTR |
GTCTATCACAAAATCAAAGA+AGG | 0.465270 | 1_2:-33193381 | Msa0067890:CDS |
GCCTTCAACTCTAAACAATC+AGG | 0.470343 | 1_2:+33194068 | None:intergenic |
AAGAAGAAAATGGTGGAGAT+TGG | 0.471464 | 1_2:+33198085 | None:intergenic |
TCCTGAGGAGAGGTTTGATC+TGG | 0.473131 | 1_2:-33195783 | Msa0067890:CDS |
GTGGTCGAGGACAGCGCTAT+AGG | 0.473850 | 1_2:-33196135 | Msa0067890:CDS |
TGCAGAAGCCTACTTACTGA+TGG | 0.478114 | 1_2:-33194616 | Msa0067890:intron |
GTTTCAGCAATAATGCCAAC+AGG | 0.481394 | 1_2:-33192489 | Msa0067890:three_prime_UTR |
TAAGGTTAGTTAAACAATAG+AGG | 0.481505 | 1_2:+33192372 | None:intergenic |
TGAACTAATGTTATGTTCAA+AGG | 0.485312 | 1_2:-33192424 | Msa0067890:three_prime_UTR |
TGGCAGTTGGGAAGCTCGAA+TGG | 0.485503 | 1_2:-33197065 | Msa0067890:CDS |
ATTTCAGTCCTTTATCTGGA+AGG | 0.490219 | 1_2:-33195266 | Msa0067890:intron |
AGTCAATGGAAAGGAGTCAT+TGG | 0.496054 | 1_2:+33192335 | None:intergenic |
GCTAACTACATAACTTTACA+TGG | 0.496572 | 1_2:-33193975 | Msa0067890:CDS |
GCGATTAAATTCAGGGGAGT+TGG | 0.497882 | 1_2:-33197323 | Msa0067890:CDS |
CTTCATCCCAGCTACTTTAG+CGG | 0.503426 | 1_2:+33196104 | None:intergenic |
GCCAGATCAAACCTCTCCTC+AGG | 0.506138 | 1_2:+33195782 | None:intergenic |
CAGATGCTAGAGAATGAGCC+TGG | 0.507226 | 1_2:-33193819 | Msa0067890:CDS |
TCAAAACAAAGTATAGTCAA+TGG | 0.507968 | 1_2:+33192321 | None:intergenic |
CACTGCACAAATGTGGCAGT+TGG | 0.508097 | 1_2:-33197078 | Msa0067890:CDS |
GCTCGAATGGGTCAATTCCT+TGG | 0.510521 | 1_2:-33197052 | Msa0067890:CDS |
ACTGCACAAATGTGGCAGTT+GGG | 0.511914 | 1_2:-33197077 | Msa0067890:CDS |
CCGTGTGAGGAGAAGAGAAC+CGG | 0.514670 | 1_2:+33198185 | None:intergenic |
AGATACTTGCCTGATTCTAC+CGG | 0.514786 | 1_2:-33193416 | Msa0067890:CDS |
AACGATTATATACCTTTGTA+GGG | 0.515993 | 1_2:+33194846 | None:intergenic |
GGCGAGGTCGACGGAGGAGA+CGG | 0.516043 | 1_2:+33198118 | None:intergenic |
TTACAGATGTGTCGTGGTCG+AGG | 0.524433 | 1_2:-33196148 | Msa0067890:intron |
AGTTATGTAGTTAGCCTCCA+TGG | 0.526706 | 1_2:+33193983 | None:intergenic |
ACAATGATCCATCAGTAAGT+AGG | 0.529454 | 1_2:+33194608 | None:intergenic |
GTGTTCAACGGCGAGGTCGA+CGG | 0.530961 | 1_2:+33198109 | None:intergenic |
CGGAGGAGACGGCAAGGTGG+CGG | 0.535976 | 1_2:+33198129 | None:intergenic |
ATTGTTTAGAGTTGAAGGCT+TGG | 0.537047 | 1_2:-33194064 | Msa0067890:CDS |
TCGAGCTGCGATTAAATTCA+GGG | 0.538997 | 1_2:-33197330 | Msa0067890:CDS |
GACGGCAAGGTGGCGGTGTG+AGG | 0.539935 | 1_2:+33198136 | None:intergenic |
GTCTGTCGCTACTACTCTTG+AGG | 0.550215 | 1_2:-33193776 | Msa0067890:intron |
TTGGTGATCCTCCTGAGGAG+AGG | 0.552332 | 1_2:-33195793 | Msa0067890:CDS |
ACACAGCTCATGTTGCTGCT+AGG | 0.553358 | 1_2:-33197442 | Msa0067890:intron |
TATTAGAGCTTTGTTAACCA+TGG | 0.554431 | 1_2:-33194000 | Msa0067890:CDS |
GGCCTAATATCTGCAACAGT+TGG | 0.557391 | 1_2:-33192647 | Msa0067890:CDS |
TAAACAATAGAGGACATCAA+TGG | 0.561945 | 1_2:+33192382 | None:intergenic |
AAACCACGCATGTGTATTGG+TGG | 0.565338 | 1_2:-33192612 | Msa0067890:CDS |
CCGGTTCTCTTCTCCTCACA+CGG | 0.565646 | 1_2:-33198185 | Msa0067890:CDS |
TTATGCAGGTATACGGCAGA+TGG | 0.570206 | 1_2:-33195851 | Msa0067890:intron |
GGCAGTTGGGAAGCTCGAAT+GGG | 0.571868 | 1_2:-33197064 | Msa0067890:CDS |
AGTGTATAGTAACAAAGAGC+GGG | 0.580787 | 1_2:-33196083 | Msa0067890:intron |
TTGTCTCTATCATCAATCAA+AGG | 0.583253 | 1_2:-33198020 | Msa0067890:intron |
TGGTATTCAGTTGATGATGT+TGG | 0.588095 | 1_2:-33193861 | Msa0067890:intron |
GCGACAGACGAAACTCTAGC+AGG | 0.588210 | 1_2:+33193790 | None:intergenic |
ACAAAGTATAGTCAATGGAA+AGG | 0.588594 | 1_2:+33192326 | None:intergenic |
TCTATCACAAAATCAAAGAA+GGG | 0.593364 | 1_2:-33193380 | Msa0067890:intron |
GAACAGATTAAACTGTCAGA+AGG | 0.597977 | 1_2:-33193447 | Msa0067890:intron |
TCTTATTTACAGATGTGTCG+TGG | 0.600555 | 1_2:-33196154 | Msa0067890:intron |
TGTTGCAAAATGCCCTACAA+AGG | 0.603887 | 1_2:-33194858 | Msa0067890:intron |
AATGGAAGGACAATAGAAAG+TGG | 0.612556 | 1_2:-33195221 | Msa0067890:CDS |
ACTTGCAGTTCATATTGGCA+TGG | 0.614305 | 1_2:-33194746 | Msa0067890:intron |
TAGCAGCCGCTAAAGTAGCT+GGG | 0.615799 | 1_2:-33196110 | Msa0067890:CDS |
TGATTGATGATAGAGACAAA+CGG | 0.617251 | 1_2:+33198024 | None:intergenic |
TAGAGCTTTGTTAACCATGG+AGG | 0.620374 | 1_2:-33193997 | Msa0067890:CDS |
CTTCATTGGTGATCCTCCTG+AGG | 0.623430 | 1_2:-33195798 | Msa0067890:CDS |
AGATCAAACCTCTCCTCAGG+AGG | 0.625024 | 1_2:+33195785 | None:intergenic |
ACTACATAACTTTACATGGG+AGG | 0.625525 | 1_2:-33193971 | Msa0067890:CDS |
AAGTGTATAGTAACAAAGAG+CGG | 0.628437 | 1_2:-33196084 | Msa0067890:CDS |
AATGATTGTGCCAATCCTGT+TGG | 0.632692 | 1_2:+33192474 | None:intergenic |
AGTGGTTCAATTAATTCACA+TGG | 0.632880 | 1_2:-33195203 | Msa0067890:intron |
TGATACCAACATTAAAACAC+AGG | 0.636892 | 1_2:+33192551 | None:intergenic |
GGTCGACGGAGGAGACGGCA+AGG | 0.637294 | 1_2:+33198123 | None:intergenic |
GGAGTAACACTGCACAAATG+TGG | 0.639362 | 1_2:-33197085 | Msa0067890:CDS |
GATTGGTGTGTTCAACGGCG+AGG | 0.643453 | 1_2:+33198102 | None:intergenic |
GTGGAGATTGGTGTGTTCAA+CGG | 0.645802 | 1_2:+33198097 | None:intergenic |
TTCAACGGCGAGGTCGACGG+AGG | 0.650561 | 1_2:+33198112 | None:intergenic |
ACTGAGAAAGAAGAAAATGG+TGG | 0.665893 | 1_2:+33198078 | None:intergenic |
AGAGGGAGTTCGAAGTACAG+AGG | 0.669918 | 1_2:-33197106 | Msa0067890:CDS |
CTAACTACATAACTTTACAT+GGG | 0.671104 | 1_2:-33193974 | Msa0067890:CDS |
CGACGGAGGAGACGGCAAGG+TGG | 0.673937 | 1_2:+33198126 | None:intergenic |
CGAGCTGCGATTAAATTCAG+GGG | 0.681626 | 1_2:-33197329 | Msa0067890:CDS |
AAATGTTTCTGCAAGCTGTG+CGG | 0.691119 | 1_2:+33194883 | None:intergenic |
CATCCACCAATACACATGCG+TGG | 0.710635 | 1_2:+33192609 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTATATGATTTACTATTTT+AGG | - | chr1_2:33192993-33193012 | Msa0067890:intron | 10.0% |
!!! | TTGTGTAATTAAATTTTTTA+TGG | - | chr1_2:33193108-33193127 | Msa0067890:intron | 10.0% |
!!! | ATAATCTTTTTTATTGTAAT+AGG | - | chr1_2:33195394-33195413 | Msa0067890:intron | 10.0% |
!! | ATATTTAATATTATTGATCA+TGG | - | chr1_2:33197191-33197210 | Msa0067890:intron | 10.0% |
!!! | TTTAATCGATTTAGATTTTT+TGG | - | chr1_2:33192585-33192604 | Msa0067890:three_prime_UTR | 15.0% |
!!! | TTTATTTTTCACTTCATTTT+AGG | - | chr1_2:33192737-33192756 | Msa0067890:intron | 15.0% |
!!! | ACTATTTTTTTCTTTGATTT+TGG | - | chr1_2:33192957-33192976 | Msa0067890:intron | 15.0% |
!! | ACTTCAGTTAAATTAAAAAT+AGG | + | chr1_2:33193486-33193505 | None:intergenic | 15.0% |
!! | TAATTTAACTGAAGTTATTT+AGG | - | chr1_2:33193491-33193510 | Msa0067890:intron | 15.0% |
!! | CTTTGTTCAATTTATTTAAA+TGG | - | chr1_2:33193789-33193808 | Msa0067890:CDS | 15.0% |
!! | TTCAATTTATTTAAATGGTT+TGG | - | chr1_2:33193794-33193813 | Msa0067890:CDS | 15.0% |
!!! | GATTATTTTGTTTTTTTAGA+TGG | - | chr1_2:33195104-33195123 | Msa0067890:intron | 15.0% |
!! | TCAACTATTTAACATATAAA+TGG | + | chr1_2:33195445-33195464 | None:intergenic | 15.0% |
!! | TCATATATTAATTTCCAAAT+TGG | - | chr1_2:33195948-33195967 | Msa0067890:intron | 15.0% |
!! | ATATTTATACGAAAATGAAA+GGG | + | chr1_2:33196330-33196349 | None:intergenic | 15.0% |
!! | TATATTTATACGAAAATGAA+AGG | + | chr1_2:33196331-33196350 | None:intergenic | 15.0% |
!!! | ATGGTCTTTTTTATATTTTT+AGG | - | chr1_2:33197210-33197229 | Msa0067890:intron | 15.0% |
!! | TGATATTATTTACATGAATA+AGG | + | chr1_2:33197425-33197444 | None:intergenic | 15.0% |
!!! | TGAAATGCATATTATTATTT+TGG | - | chr1_2:33197762-33197781 | Msa0067890:intron | 15.0% |
!!! | AAATGGTATTTTCAAATTCA+AGG | + | chr1_2:33192646-33192665 | None:intergenic | 20.0% |
!! | TTGAATTTGAAAATACCATT+TGG | - | chr1_2:33192645-33192664 | Msa0067890:CDS | 20.0% |
!! | AAAATAAAACTTGGAAAGAT+AGG | + | chr1_2:33192725-33192744 | None:intergenic | 20.0% |
!! | ATGAAGTGAAAAATAAAACT+TGG | + | chr1_2:33192734-33192753 | None:intergenic | 20.0% |
!!! | GTTTTGTATTTGATTTTTGT+AGG | - | chr1_2:33193026-33193045 | Msa0067890:intron | 20.0% |
!!! | TAGTGTAACATTTTAAATTG+TGG | - | chr1_2:33193605-33193624 | Msa0067890:intron | 20.0% |
!!! | AATTTATTTAAATGGTTTGG+TGG | - | chr1_2:33193797-33193816 | Msa0067890:CDS | 20.0% |
!! | TCAATTCATTAAAACTATCA+AGG | + | chr1_2:33193963-33193982 | None:intergenic | 20.0% |
!!! | TGATAGTTTTAATGAATTGA+AGG | - | chr1_2:33193963-33193982 | Msa0067890:intron | 20.0% |
!!! | AATAAGTTGCTCTAAAATTT+TGG | + | chr1_2:33194168-33194187 | None:intergenic | 20.0% |
!! | AACCTATCTAATACTTTATT+TGG | - | chr1_2:33194234-33194253 | Msa0067890:intron | 20.0% |
!!! | ATCCAAATAAAGTATTAGAT+AGG | + | chr1_2:33194239-33194258 | None:intergenic | 20.0% |
!!! | GTATATTTCTATTTACTGAA+TGG | - | chr1_2:33194438-33194457 | Msa0067890:intron | 20.0% |
!!! | GCAACTTTATGTTTTTTTAT+AGG | - | chr1_2:33194464-33194483 | Msa0067890:intron | 20.0% |
!! | GAAAAGATCAATGTTTATAT+TGG | - | chr1_2:33194890-33194909 | Msa0067890:CDS | 20.0% |
!!! | TTAATGTTGTTGGATTATTT+TGG | - | chr1_2:33195040-33195059 | Msa0067890:intron | 20.0% |
!!! | TAATGTTGTTGGATTATTTT+GGG | - | chr1_2:33195041-33195060 | Msa0067890:intron | 20.0% |
!! | TTGTAGTTTATCTAAATTAG+AGG | - | chr1_2:33195339-33195358 | Msa0067890:intron | 20.0% |
!! | CAGGAAGAATTATAATAAAA+TGG | + | chr1_2:33195505-33195524 | None:intergenic | 20.0% |
!!! | CATTTTATTATAATTCTTCC+TGG | - | chr1_2:33195503-33195522 | Msa0067890:intron | 20.0% |
!! | AATTTCCAAATTGGTTAATT+TGG | - | chr1_2:33195957-33195976 | Msa0067890:intron | 20.0% |
!! | TATAACCAAATTAACCAATT+TGG | + | chr1_2:33195965-33195984 | None:intergenic | 20.0% |
!! | TAGGTCAAATTTGAAAAATT+AGG | + | chr1_2:33196787-33196806 | None:intergenic | 20.0% |
!!! | TTTTATATATTGCCTTCATA+TGG | - | chr1_2:33197454-33197473 | Msa0067890:CDS | 20.0% |
!!! | GATTTTGTTAAACTAAGAAT+GGG | + | chr1_2:33197492-33197511 | None:intergenic | 20.0% |
!!! | AGATTTTGTTAAACTAAGAA+TGG | + | chr1_2:33197493-33197512 | None:intergenic | 20.0% |
!! | TTAGTTTAACAAAATCTAAC+TGG | - | chr1_2:33197496-33197515 | Msa0067890:intron | 20.0% |
! | TTTGTTCTTCTAATTGATTG+AGG | - | chr1_2:33192551-33192570 | Msa0067890:three_prime_UTR | 25.0% |
!!! | TAGATTTTTTGGTATGTCTT+TGG | - | chr1_2:33192596-33192615 | Msa0067890:exon | 25.0% |
! | ATATGGGTAAGTTTCAATTT+GGG | - | chr1_2:33192678-33192697 | Msa0067890:intron | 25.0% |
! | AGCAATAGAGAAAAATCAAA+AGG | + | chr1_2:33192838-33192857 | None:intergenic | 25.0% |
!!! | TTGTATTTGATTTTTGTAGG+TGG | - | chr1_2:33193029-33193048 | Msa0067890:intron | 25.0% |
!! | TTATGATGATGATCTTAAAC+AGG | - | chr1_2:33193226-33193245 | Msa0067890:intron | 25.0% |
!! | AAATCAATGTTTTCTCAAGA+GGG | - | chr1_2:33193376-33193395 | Msa0067890:intron | 25.0% |
! | ATATTGAAACATCATGTATC+TGG | - | chr1_2:33193576-33193595 | Msa0067890:intron | 25.0% |
! | AAAGAAAATGAATAGAAAGG+AGG | + | chr1_2:33193707-33193726 | None:intergenic | 25.0% |
! | AGGAAAGAAAATGAATAGAA+AGG | + | chr1_2:33193710-33193729 | None:intergenic | 25.0% |
!! | TTTCTATTCATTTTCTTTCC+TGG | - | chr1_2:33193709-33193728 | Msa0067890:intron | 25.0% |
! | TTGAACAAAGTTATTGTATC+AGG | + | chr1_2:33193779-33193798 | None:intergenic | 25.0% |
! | GAATTGAAGGATATAGATTA+TGG | - | chr1_2:33193976-33193995 | Msa0067890:CDS | 25.0% |
!!! | AATTTTGTTTTTGAACTGCA+TGG | - | chr1_2:33194288-33194307 | Msa0067890:intron | 25.0% |
!!! | TTTTCATCATTGGCTTAATA+GGG | + | chr1_2:33194875-33194894 | None:intergenic | 25.0% |
!! | AACATTGATCTTTTCATCAT+TGG | + | chr1_2:33194885-33194904 | None:intergenic | 25.0% |
! | TTGATGCTAATTAATGTTGT+TGG | - | chr1_2:33195030-33195049 | Msa0067890:intron | 25.0% |
! | AATTTAACAGTTGCTTATTC+TGG | - | chr1_2:33195188-33195207 | Msa0067890:intron | 25.0% |
! | ATTTAACAGTTGCTTATTCT+GGG | - | chr1_2:33195189-33195208 | Msa0067890:intron | 25.0% |
!!! | GTTGACTTTTGTATTTTATC+AGG | - | chr1_2:33195573-33195592 | Msa0067890:intron | 25.0% |
! | AACGATTATATACCTTTGTA+GGG | + | chr1_2:33195656-33195675 | None:intergenic | 25.0% |
! | TGGATCATTGTTTCATAATT+TGG | - | chr1_2:33195903-33195922 | Msa0067890:intron | 25.0% |
! | TTACGAGTTACTATTGTTTA+TGG | - | chr1_2:33196060-33196079 | Msa0067890:intron | 25.0% |
! | AGTTACTATTGTTTATGGAA+TGG | - | chr1_2:33196065-33196084 | Msa0067890:intron | 25.0% |
!!! | AAGAGAAAAAGGTTTTGATT+TGG | - | chr1_2:33196280-33196299 | Msa0067890:intron | 25.0% |
! | TTCGTATAAATATAGAGCAT+TGG | - | chr1_2:33196337-33196356 | Msa0067890:intron | 25.0% |
! | ATGTAGTTAGATAAGTTTCT+AGG | - | chr1_2:33196395-33196414 | Msa0067890:intron | 25.0% |
! | CTAACTACATAACTTTACAT+GGG | - | chr1_2:33196525-33196544 | Msa0067890:intron | 25.0% |
! | AGTATCAATGCTACATATAT+AGG | + | chr1_2:33196806-33196825 | None:intergenic | 25.0% |
! | TCTATCACAAAATCAAAGAA+GGG | - | chr1_2:33197119-33197138 | Msa0067890:CDS | 25.0% |
! | TGTTTGGAAAAAAAAGTTGA+TGG | - | chr1_2:33197265-33197284 | Msa0067890:intron | 25.0% |
! | CTTTGATATATTTCAAGACA+TGG | - | chr1_2:33197532-33197551 | Msa0067890:intron | 25.0% |
! | AGATTTATGCATCCATTATA+AGG | + | chr1_2:33197587-33197606 | None:intergenic | 25.0% |
! | TGAACTAATGTTATGTTCAA+AGG | - | chr1_2:33198075-33198094 | Msa0067890:CDS | 25.0% |
!!! | TGTTCAAAGGTATTTAGAAA+AGG | - | chr1_2:33198088-33198107 | Msa0067890:CDS | 25.0% |
!! | TAAGGTTAGTTAAACAATAG+AGG | + | chr1_2:33198130-33198149 | None:intergenic | 25.0% |
! | TCAAAACAAAGTATAGTCAA+TGG | + | chr1_2:33198181-33198200 | None:intergenic | 25.0% |
TCACACGGTAAACAAAAAAA+CGG | - | chr1_2:33192329-33192348 | Msa0067890:three_prime_UTR | 30.0% | |
! | TGATTGATGATAGAGACAAA+CGG | + | chr1_2:33192478-33192497 | None:intergenic | 30.0% |
TTGTCTCTATCATCAATCAA+AGG | - | chr1_2:33192479-33192498 | Msa0067890:three_prime_UTR | 30.0% | |
ACAAAATCGCACCAAAAAAT+GGG | + | chr1_2:33192536-33192555 | None:intergenic | 30.0% | |
AACAAAATCGCACCAAAAAA+TGG | + | chr1_2:33192537-33192556 | None:intergenic | 30.0% | |
TTTGAAAATACCATTTGGCA+TGG | - | chr1_2:33192650-33192669 | Msa0067890:CDS | 30.0% | |
GATATGGGTAAGTTTCAATT+TGG | - | chr1_2:33192677-33192696 | Msa0067890:intron | 30.0% | |
AGATCATTAGGATCATCTTA+GGG | - | chr1_2:33192914-33192933 | Msa0067890:intron | 30.0% | |
! | AGGCTCTGATATTCAAAATT+TGG | + | chr1_2:33193145-33193164 | None:intergenic | 30.0% |
TTGATGAATGTGAAACTAGA+TGG | - | chr1_2:33193270-33193289 | Msa0067890:intron | 30.0% | |
! | CAAATCAATGTTTTCTCAAG+AGG | - | chr1_2:33193375-33193394 | Msa0067890:intron | 30.0% |
AGCAATTCTCTGTTATATCA+CGG | + | chr1_2:33193643-33193662 | None:intergenic | 30.0% | |
AAAAGTTAATGTATCAGAGC+TGG | + | chr1_2:33193755-33193774 | None:intergenic | 30.0% | |
! | TAAACAACTTCCTGATGTTT+TGG | + | chr1_2:33193838-33193857 | None:intergenic | 30.0% |
AAACATCAGGAAGTTGTTTA+AGG | - | chr1_2:33193838-33193857 | Msa0067890:CDS | 30.0% | |
!! | CAAATCTCTGTTAGTTTGTA+AGG | - | chr1_2:33193999-33194018 | Msa0067890:CDS | 30.0% |
! | AAATTCTACTGTTGGTGAAT+AGG | + | chr1_2:33194128-33194147 | None:intergenic | 30.0% |
! | TCACCAACAGTAGAATTTTA+TGG | - | chr1_2:33194130-33194149 | Msa0067890:intron | 30.0% |
ATGCCATAAAATTCTACTGT+TGG | + | chr1_2:33194136-33194155 | None:intergenic | 30.0% | |
AAGTGTATAGTAACAAAGAG+CGG | - | chr1_2:33194415-33194434 | Msa0067890:intron | 30.0% | |
! | AGTAAGTTATGTTAGTTTCC+CGG | - | chr1_2:33194495-33194514 | Msa0067890:intron | 30.0% |
TAATCTCAAATGCATTATGC+AGG | - | chr1_2:33194634-33194653 | Msa0067890:intron | 30.0% | |
AAATGCATTATGCAGGTATA+CGG | - | chr1_2:33194641-33194660 | Msa0067890:intron | 30.0% | |
! | TGACATATTGCTTCTAAAGA+AGG | + | chr1_2:33194755-33194774 | None:intergenic | 30.0% |
!!! | CTTTTCATCATTGGCTTAAT+AGG | + | chr1_2:33194876-33194895 | None:intergenic | 30.0% |
!! | TGTTTGTGCGCTTTTAAAAA+AGG | - | chr1_2:33194953-33194972 | Msa0067890:intron | 30.0% |
! | TGATTTTCTGATTCTGATTC+TGG | - | chr1_2:33195077-33195096 | Msa0067890:intron | 30.0% |
! | GATTTTCTGATTCTGATTCT+GGG | - | chr1_2:33195078-33195097 | Msa0067890:intron | 30.0% |
ATGGACAATGAATTTGAGAA+TGG | - | chr1_2:33195123-33195142 | Msa0067890:intron | 30.0% | |
AGTGGTTCAATTAATTCACA+TGG | - | chr1_2:33195296-33195315 | Msa0067890:intron | 30.0% | |
GAACGATTATATACCTTTGT+AGG | + | chr1_2:33195657-33195676 | None:intergenic | 30.0% | |
TTTCAGAACTTACCTCTTAA+GGG | + | chr1_2:33195822-33195841 | None:intergenic | 30.0% | |
GATAGCTTATGAAAGTTACT+TGG | + | chr1_2:33195930-33195949 | None:intergenic | 30.0% | |
TTGCTTCTACAGACAAAAAT+GGG | + | chr1_2:33196147-33196166 | None:intergenic | 30.0% | |
ATTGCTTCTACAGACAAAAA+TGG | + | chr1_2:33196148-33196167 | None:intergenic | 30.0% | |
ATATTCGAGTATAAACCAGT+TGG | - | chr1_2:33196221-33196240 | Msa0067890:intron | 30.0% | |
!! | TAGAGCATTGGAAAAATTTG+AGG | - | chr1_2:33196349-33196368 | Msa0067890:intron | 30.0% |
ATTTGAGGAGAAGCAAATAA+AGG | - | chr1_2:33196364-33196383 | Msa0067890:intron | 30.0% | |
!! | TATTAGAGCTTTGTTAACCA+TGG | - | chr1_2:33196499-33196518 | Msa0067890:intron | 30.0% |
GCTAACTACATAACTTTACA+TGG | - | chr1_2:33196524-33196543 | Msa0067890:intron | 30.0% | |
TAGAATTCAGAAGAAGAATC+AGG | - | chr1_2:33196586-33196605 | Msa0067890:intron | 30.0% | |
CACGTGTTAGTAAATACAAT+TGG | - | chr1_2:33196991-33197010 | Msa0067890:intron | 30.0% | |
GTCTATCACAAAATCAAAGA+AGG | - | chr1_2:33197118-33197137 | Msa0067890:CDS | 30.0% | |
ATGTTCTTGATACCATATGA+AGG | + | chr1_2:33197469-33197488 | None:intergenic | 30.0% | |
AATTCTACTTATAAGGCCTT+AGG | + | chr1_2:33197635-33197654 | None:intergenic | 30.0% | |
GCTGCATAATTCTACTTATA+AGG | + | chr1_2:33197642-33197661 | None:intergenic | 30.0% | |
CTATATGCTCATGCTATATA+AGG | + | chr1_2:33197717-33197736 | None:intergenic | 30.0% | |
AATGATACATGATCGAACTA+TGG | + | chr1_2:33197789-33197808 | None:intergenic | 30.0% | |
!!! | TCATCTTGTTTTGTAGATGA+TGG | - | chr1_2:33197827-33197846 | Msa0067890:intron | 30.0% |
!!! | ATACACCTGTGTTTTAATGT+TGG | - | chr1_2:33197943-33197962 | Msa0067890:intron | 30.0% |
TGATACCAACATTAAAACAC+AGG | + | chr1_2:33197951-33197970 | None:intergenic | 30.0% | |
TAAACAATAGAGGACATCAA+TGG | + | chr1_2:33198120-33198139 | None:intergenic | 30.0% | |
! | TTGGTGAGTATTGTGAAATA+AGG | + | chr1_2:33198148-33198167 | None:intergenic | 30.0% |
ACAAAGTATAGTCAATGGAA+AGG | + | chr1_2:33198176-33198195 | None:intergenic | 30.0% | |
!!! | GTTTTTTTGTTTACCGTGTG+AGG | + | chr1_2:33192330-33192349 | None:intergenic | 35.0% |
CACACGGTAAACAAAAAAAC+GGG | - | chr1_2:33192330-33192349 | Msa0067890:three_prime_UTR | 35.0% | |
! | AAGAAGAAAATGGTGGAGAT+TGG | + | chr1_2:33192417-33192436 | None:intergenic | 35.0% |
ACTGAGAAAGAAGAAAATGG+TGG | + | chr1_2:33192424-33192443 | None:intergenic | 35.0% | |
CACACTGAGAAAGAAGAAAA+TGG | + | chr1_2:33192427-33192446 | None:intergenic | 35.0% | |
CTCTATCATCAATCAAAGGT+TGG | - | chr1_2:33192483-33192502 | Msa0067890:three_prime_UTR | 35.0% | |
ATTTGGCATGGATCAGATAT+GGG | - | chr1_2:33192662-33192681 | Msa0067890:intron | 35.0% | |
! | GTTTCAATTTGGGATGTTAC+TGG | - | chr1_2:33192688-33192707 | Msa0067890:intron | 35.0% |
CAAAAGTCCTACAGATCATT+AGG | - | chr1_2:33192902-33192921 | Msa0067890:intron | 35.0% | |
AGATGATCCTAATGATCTGT+AGG | + | chr1_2:33192912-33192931 | None:intergenic | 35.0% | |
CAGATCATTAGGATCATCTT+AGG | - | chr1_2:33192913-33192932 | Msa0067890:intron | 35.0% | |
GATCATTAGGATCATCTTAG+GGG | - | chr1_2:33192915-33192934 | Msa0067890:intron | 35.0% | |
!!! | TAGGTTCTCACTTTTTACCA+AGG | + | chr1_2:33193467-33193486 | None:intergenic | 35.0% |
CTTACCAACAAAATTGTGCA+CGG | - | chr1_2:33193519-33193538 | Msa0067890:intron | 35.0% | |
! | TAAACCGTGCACAATTTTGT+TGG | + | chr1_2:33193526-33193545 | None:intergenic | 35.0% |
! | GTGCACGGTTTAGTTTATAT+TGG | - | chr1_2:33193534-33193553 | Msa0067890:intron | 35.0% |
CATTACATGATGCAATCTAC+AGG | - | chr1_2:33193664-33193683 | Msa0067890:intron | 35.0% | |
! | CTATTCATTTTCTTTCCTGG+AGG | - | chr1_2:33193712-33193731 | Msa0067890:intron | 35.0% |
ATCAGGAAGTTGTTTAAGGA+TGG | - | chr1_2:33193842-33193861 | Msa0067890:CDS | 35.0% | |
TTAAGGATGGCTTCATTATC+AGG | - | chr1_2:33193855-33193874 | Msa0067890:intron | 35.0% | |
!! | ATCTCTGTTAGTTTGTAAGG+TGG | - | chr1_2:33194002-33194021 | Msa0067890:CDS | 35.0% |
TTAGTTGTGCTGAGTATTCT+AGG | - | chr1_2:33194076-33194095 | Msa0067890:CDS | 35.0% | |
! | TCAACCCTATTTGAAGTGTA+TGG | - | chr1_2:33194189-33194208 | Msa0067890:intron | 35.0% |
CACTCCATACACTTCAAATA+GGG | + | chr1_2:33194196-33194215 | None:intergenic | 35.0% | |
! | TCTTATTTACAGATGTGTCG+TGG | - | chr1_2:33194345-33194364 | Msa0067890:intron | 35.0% |
AGTGTATAGTAACAAAGAGC+GGG | - | chr1_2:33194416-33194435 | Msa0067890:intron | 35.0% | |
! | GAGTTTAAAGTCAGAGATCT+CGG | + | chr1_2:33194528-33194547 | None:intergenic | 35.0% |
! | GACGTTGTATTTGACTTCAT+TGG | - | chr1_2:33194687-33194706 | Msa0067890:intron | 35.0% |
!! | AGCACTGATAGAAATAGTGA+AGG | + | chr1_2:33194826-33194845 | None:intergenic | 35.0% |
GGTAAGAGTGAAAAGAAATG+AGG | + | chr1_2:33194854-33194873 | None:intergenic | 35.0% | |
ACAAGCAACTTCTGATATGA+TGG | - | chr1_2:33195146-33195165 | Msa0067890:intron | 35.0% | |
TGTGATTTCAGTCCTTTATC+TGG | - | chr1_2:33195229-33195248 | Msa0067890:CDS | 35.0% | |
ATTTCAGTCCTTTATCTGGA+AGG | - | chr1_2:33195233-33195252 | Msa0067890:CDS | 35.0% | |
AGTAAACACCTTCCAGATAA+AGG | + | chr1_2:33195244-33195263 | None:intergenic | 35.0% | |
TACTATGAGAGAGAGAGAAA+TGG | - | chr1_2:33195260-33195279 | Msa0067890:CDS | 35.0% | |
AATGGAAGGACAATAGAAAG+TGG | - | chr1_2:33195278-33195297 | Msa0067890:intron | 35.0% | |
TCTTCCTGGATCTTCATTTA+TGG | - | chr1_2:33195517-33195536 | Msa0067890:intron | 35.0% | |
! | CTTGTCATTTGTCCAATGAT+CGG | - | chr1_2:33195686-33195705 | Msa0067890:intron | 35.0% |
ATTTGTCCAATGATCGGAAA+TGG | - | chr1_2:33195692-33195711 | Msa0067890:intron | 35.0% | |
GATATTCCATTTCCGATCAT+TGG | + | chr1_2:33195701-33195720 | None:intergenic | 35.0% | |
ATTGCACTTGCAGTTCATAT+TGG | - | chr1_2:33195748-33195767 | Msa0067890:intron | 35.0% | |
GTTTCAGAACTTACCTCTTA+AGG | + | chr1_2:33195823-33195842 | None:intergenic | 35.0% | |
ACAATGATCCATCAGTAAGT+AGG | + | chr1_2:33195894-33195913 | None:intergenic | 35.0% | |
CTATTGTTTATGGAATGGCT+AGG | - | chr1_2:33196070-33196089 | Msa0067890:intron | 35.0% | |
CTAACTACGAGGATTATTCA+GGG | - | chr1_2:33196101-33196120 | Msa0067890:CDS | 35.0% | |
TAACTACGAGGATTATTCAG+GGG | - | chr1_2:33196102-33196121 | Msa0067890:CDS | 35.0% | |
TGCTTCTACAGACAAAAATG+GGG | + | chr1_2:33196146-33196165 | None:intergenic | 35.0% | |
TGCAATATGGGAAGAGAAAA+AGG | - | chr1_2:33196269-33196288 | Msa0067890:intron | 35.0% | |
! | ACCTGATTGTTTAGAGTTGA+AGG | - | chr1_2:33196430-33196449 | Msa0067890:intron | 35.0% |
! | ATTGTTTAGAGTTGAAGGCT+TGG | - | chr1_2:33196435-33196454 | Msa0067890:intron | 35.0% |
ACTACATAACTTTACATGGG+AGG | - | chr1_2:33196528-33196547 | Msa0067890:intron | 35.0% | |
ACTTTACATGGGAGGATTAA+AGG | - | chr1_2:33196536-33196555 | Msa0067890:intron | 35.0% | |
GGATGCAGTTATAACAACAA+TGG | - | chr1_2:33196618-33196637 | Msa0067890:intron | 35.0% | |
!! | TGGTATTCAGTTGATGATGT+TGG | - | chr1_2:33196638-33196657 | Msa0067890:intron | 35.0% |
!! | AGTTGATGATGTTGGTTCTT+TGG | - | chr1_2:33196646-33196665 | Msa0067890:intron | 35.0% |
GAACAGATTAAACTGTCAGA+AGG | - | chr1_2:33197052-33197071 | Msa0067890:CDS | 35.0% | |
CTGACTAAGATGAACATGTT+TGG | - | chr1_2:33197249-33197268 | Msa0067890:intron | 35.0% | |
!!! | AAAGTTGATGGTTTTGCACA+TGG | - | chr1_2:33197277-33197296 | Msa0067890:CDS | 35.0% |
TTCACCTTTGCTTAGTTTCA+AGG | - | chr1_2:33197346-33197365 | Msa0067890:intron | 35.0% | |
GAAATGCATAACAGAAACTG+TGG | - | chr1_2:33197554-33197573 | Msa0067890:intron | 35.0% | |
ATGAGCATATAGATCAGTAG+TGG | - | chr1_2:33197725-33197744 | Msa0067890:intron | 35.0% | |
!!! | CTTGTTTTGTAGATGATGGT+AGG | - | chr1_2:33197831-33197850 | Msa0067890:intron | 35.0% |
AACCAACTGTTGCAGATATT+AGG | + | chr1_2:33197857-33197876 | None:intergenic | 35.0% | |
AAAAAACCACGCATGTGTAT+TGG | - | chr1_2:33197884-33197903 | Msa0067890:intron | 35.0% | |
!!! | TGCTTGCATGTCCCATTTTT+TGG | - | chr1_2:33192522-33192541 | Msa0067890:three_prime_UTR | 40.0% |
CATATCTGATCCATGCCAAA+TGG | + | chr1_2:33192663-33192682 | None:intergenic | 40.0% | |
CATTTGGCATGGATCAGATA+TGG | - | chr1_2:33192661-33192680 | Msa0067890:intron | 40.0% | |
TTTAATCGCAGCTCGATCAT+AGG | + | chr1_2:33193165-33193184 | None:intergenic | 40.0% | |
ATCGAGCTGCGATTAAATTC+AGG | - | chr1_2:33193168-33193187 | Msa0067890:intron | 40.0% | |
TCGAGCTGCGATTAAATTCA+GGG | - | chr1_2:33193169-33193188 | Msa0067890:intron | 40.0% | |
TGATGCAATCTACAGGATGA+TGG | - | chr1_2:33193671-33193690 | Msa0067890:intron | 40.0% | |
! | TTTTCTTTCCTGGAGGATGA+TGG | - | chr1_2:33193719-33193738 | Msa0067890:intron | 40.0% |
AATGTATCAGAGCTGGAACA+GGG | + | chr1_2:33193748-33193767 | None:intergenic | 40.0% | |
TAATGTATCAGAGCTGGAAC+AGG | + | chr1_2:33193749-33193768 | None:intergenic | 40.0% | |
GATAGGGAGTGAATCTTAGT+TGG | + | chr1_2:33193884-33193903 | None:intergenic | 40.0% | |
AAGGGACGTCATTCTAGATA+TGG | - | chr1_2:33193935-33193954 | Msa0067890:intron | 40.0% | |
GCACTCCATACACTTCAAAT+AGG | + | chr1_2:33194197-33194216 | None:intergenic | 40.0% | |
! | AGGTTTGATCTGGCATTTTG+TGG | - | chr1_2:33194726-33194745 | Msa0067890:CDS | 40.0% |
TAGCAAACTGTGAAGTGATG+AGG | - | chr1_2:33194777-33194796 | Msa0067890:intron | 40.0% | |
TCATTCGTGGAGCAAATTAC+AGG | + | chr1_2:33194987-33195006 | None:intergenic | 40.0% | |
ATGAGAGAGAGAGAAATGGA+AGG | - | chr1_2:33195264-33195283 | Msa0067890:intron | 40.0% | |
GTTGCCATAAATGAAGATCC+AGG | + | chr1_2:33195524-33195543 | None:intergenic | 40.0% | |
! | AAATGTTTCTGCAAGCTGTG+CGG | + | chr1_2:33195619-33195638 | None:intergenic | 40.0% |
TGTTGCAAAATGCCCTACAA+AGG | - | chr1_2:33195641-33195660 | Msa0067890:intron | 40.0% | |
ACTTGCAGTTCATATTGGCA+TGG | - | chr1_2:33195753-33195772 | Msa0067890:intron | 40.0% | |
GCAAAATCAGGCTCTACTAT+TGG | - | chr1_2:33195785-33195804 | Msa0067890:CDS | 40.0% | |
!! | GCATTGATTCTTCCCTTAAG+AGG | - | chr1_2:33195807-33195826 | Msa0067890:CDS | 40.0% |
GCTAACTACGAGGATTATTC+AGG | - | chr1_2:33196100-33196119 | Msa0067890:CDS | 40.0% | |
CAGGGGATAAGAATTATCAG+AGG | - | chr1_2:33196119-33196138 | Msa0067890:CDS | 40.0% | |
TCGAGTATAAACCAGTTGGT+TGG | - | chr1_2:33196225-33196244 | Msa0067890:intron | 40.0% | |
TCTTGATACATCCAACCAAC+TGG | + | chr1_2:33196239-33196258 | None:intergenic | 40.0% | |
!! | AGAGAGAGCATTGTGCAATA+TGG | - | chr1_2:33196256-33196275 | Msa0067890:intron | 40.0% |
!! | GAGAGAGCATTGTGCAATAT+GGG | - | chr1_2:33196257-33196276 | Msa0067890:intron | 40.0% |
GCCTTCAACTCTAAACAATC+AGG | + | chr1_2:33196434-33196453 | None:intergenic | 40.0% | |
!! | TAGAGCTTTGTTAACCATGG+AGG | - | chr1_2:33196502-33196521 | Msa0067890:intron | 40.0% |
! | AGTTATGTAGTTAGCCTCCA+TGG | + | chr1_2:33196519-33196538 | None:intergenic | 40.0% |
GAGGATTAAAGGTAAGTGCT+TGG | - | chr1_2:33196547-33196566 | Msa0067890:intron | 40.0% | |
!! | AGAAGAATCAGGTTGACTGT+TGG | - | chr1_2:33196597-33196616 | Msa0067890:intron | 40.0% |
ACTCTTGAGGTAAGCATCTT+CGG | - | chr1_2:33196736-33196755 | Msa0067890:intron | 40.0% | |
AGATACTTGCCTGATTCTAC+CGG | - | chr1_2:33197083-33197102 | Msa0067890:CDS | 40.0% | |
GATAGACTTGCAGTATTTGC+CGG | + | chr1_2:33197105-33197124 | None:intergenic | 40.0% | |
CATGCCTTGAAACTAAGCAA+AGG | + | chr1_2:33197353-33197372 | None:intergenic | 40.0% | |
GTAATACAGCTCTTTGCCTA+AGG | - | chr1_2:33197616-33197635 | Msa0067890:intron | 40.0% | |
GTTTCAGCAATAATGCCAAC+AGG | - | chr1_2:33198010-33198029 | Msa0067890:intron | 40.0% | |
AGCAATAATGCCAACAGGAT+TGG | - | chr1_2:33198015-33198034 | Msa0067890:intron | 40.0% | |
AATGATTGTGCCAATCCTGT+TGG | + | chr1_2:33198028-33198047 | None:intergenic | 40.0% | |
AGTCAATGGAAAGGAGTCAT+TGG | + | chr1_2:33198167-33198186 | None:intergenic | 40.0% | |
GTGGAGATTGGTGTGTTCAA+CGG | + | chr1_2:33192405-33192424 | None:intergenic | 45.0% | |
CATTAGGATCATCTTAGGGG+TGG | - | chr1_2:33192918-33192937 | Msa0067890:intron | 45.0% | |
CGAGCTGCGATTAAATTCAG+GGG | - | chr1_2:33193170-33193189 | Msa0067890:intron | 45.0% | |
GCGATTAAATTCAGGGGAGT+TGG | - | chr1_2:33193176-33193195 | Msa0067890:intron | 45.0% | |
GGAGTAACACTGCACAAATG+TGG | - | chr1_2:33193414-33193433 | Msa0067890:CDS | 45.0% | |
ACTGCACAAATGTGGCAGTT+GGG | - | chr1_2:33193422-33193441 | Msa0067890:CDS | 45.0% | |
CTCTGTTATATCACGGACCA+TGG | + | chr1_2:33193636-33193655 | None:intergenic | 45.0% | |
TCTTTGCAGGCCAAAACATC+AGG | - | chr1_2:33193825-33193844 | Msa0067890:CDS | 45.0% | |
! | CTTCATCCCAGCTACTTTAG+CGG | + | chr1_2:33194398-33194417 | None:intergenic | 45.0% |
AGAGATCTCGGATTTGATCC+GGG | + | chr1_2:33194516-33194535 | None:intergenic | 45.0% | |
CAGAGATCTCGGATTTGATC+CGG | + | chr1_2:33194517-33194536 | None:intergenic | 45.0% | |
TTAGAAGTCCCACACTACGA+AGG | + | chr1_2:33194583-33194602 | None:intergenic | 45.0% | |
TTATGCAGGTATACGGCAGA+TGG | - | chr1_2:33194648-33194667 | Msa0067890:intron | 45.0% | |
CAGAGAAGCTAACTCATTCG+TGG | + | chr1_2:33195000-33195019 | None:intergenic | 45.0% | |
TGATGGCAAGCAGTCAACAA+AGG | - | chr1_2:33195163-33195182 | Msa0067890:intron | 45.0% | |
TGGCAGCAAAGTGCAAAATC+AGG | - | chr1_2:33195773-33195792 | Msa0067890:intron | 45.0% | |
TGCAGAAGCCTACTTACTGA+TGG | - | chr1_2:33195883-33195902 | Msa0067890:intron | 45.0% | |
CTGAAAGCAGGAACGAAAAG+AGG | + | chr1_2:33196021-33196040 | None:intergenic | 45.0% | |
TTCCTGCTTTCAGCTATGAG+AGG | - | chr1_2:33196028-33196047 | Msa0067890:intron | 45.0% | |
TCCTGCTTTCAGCTATGAGA+GGG | - | chr1_2:33196029-33196048 | Msa0067890:intron | 45.0% | |
CAGTATTTGCCGGTAGAATC+AGG | + | chr1_2:33197095-33197114 | None:intergenic | 45.0% | |
TGTGGCGCGAATCCTTATAA+TGG | - | chr1_2:33197572-33197591 | Msa0067890:intron | 45.0% | |
GGCCTAATATCTGCAACAGT+TGG | - | chr1_2:33197852-33197871 | Msa0067890:intron | 45.0% | |
AAACCACGCATGTGTATTGG+TGG | - | chr1_2:33197887-33197906 | Msa0067890:intron | 45.0% | |
AGGATCATCTTAGGGGTGGA+CGG | - | chr1_2:33192922-33192941 | Msa0067890:intron | 50.0% | |
ACACAGCTCATGTTGCTGCT+AGG | - | chr1_2:33193057-33193076 | Msa0067890:intron | 50.0% | |
AGAGGGAGTTCGAAGTACAG+AGG | - | chr1_2:33193393-33193412 | Msa0067890:CDS | 50.0% | |
CACTGCACAAATGTGGCAGT+TGG | - | chr1_2:33193421-33193440 | Msa0067890:CDS | 50.0% | |
GCTCGAATGGGTCAATTCCT+TGG | - | chr1_2:33193447-33193466 | Msa0067890:intron | 50.0% | |
TTTAAATTGTGGCCGCGCCA+TGG | - | chr1_2:33193616-33193635 | Msa0067890:intron | 50.0% | |
TTATATCACGGACCATGGCG+CGG | + | chr1_2:33193631-33193650 | None:intergenic | 50.0% | |
! | TTTGGTGGCTCTCTCTTTGC+AGG | - | chr1_2:33193812-33193831 | Msa0067890:CDS | 50.0% |
TTCACTCCCTATCCTGTGCT+AGG | - | chr1_2:33193891-33193910 | Msa0067890:intron | 50.0% | |
ATGAAGGAGGCCAAGAGGAA+GGG | - | chr1_2:33193917-33193936 | Msa0067890:intron | 50.0% | |
AGAATGACGTCCCTTCCTCT+TGG | + | chr1_2:33193930-33193949 | None:intergenic | 50.0% | |
TTACAGATGTGTCGTGGTCG+AGG | - | chr1_2:33194351-33194370 | Msa0067890:intron | 50.0% | |
TAGCAGCCGCTAAAGTAGCT+GGG | - | chr1_2:33194389-33194408 | Msa0067890:intron | 50.0% | |
GGTGAGCTAAGGGACATTGA+AGG | + | chr1_2:33194550-33194569 | None:intergenic | 50.0% | |
! | CTTCATTGGTGATCCTCCTG+AGG | - | chr1_2:33194701-33194720 | Msa0067890:CDS | 50.0% |
AGATCAAACCTCTCCTCAGG+AGG | + | chr1_2:33194717-33194736 | None:intergenic | 50.0% | |
TCCTGAGGAGAGGTTTGATC+TGG | - | chr1_2:33194716-33194735 | Msa0067890:CDS | 50.0% | |
TCCCTCTCATAGCTGAAAGC+AGG | + | chr1_2:33196033-33196052 | None:intergenic | 50.0% | |
AGGTTGTGCAGCTAACTACG+AGG | - | chr1_2:33196090-33196109 | Msa0067890:CDS | 50.0% | |
CAGATGCTAGAGAATGAGCC+TGG | - | chr1_2:33196680-33196699 | Msa0067890:intron | 50.0% | |
AACTCTAGCAGGCTCTTTCC+AGG | + | chr1_2:33196701-33196720 | None:intergenic | 50.0% | |
GTCTGTCGCTACTACTCTTG+AGG | - | chr1_2:33196723-33196742 | Msa0067890:intron | 50.0% | |
GTCGACATGATTCTCACACG+TGG | - | chr1_2:33196855-33196874 | Msa0067890:intron | 50.0% | |
CATCCACCAATACACATGCG+TGG | + | chr1_2:33197893-33197912 | None:intergenic | 50.0% | |
CCGTGTGAGGAGAAGAGAAC+CGG | + | chr1_2:33192317-33192336 | None:intergenic | 55.0% | |
CCGGTTCTCTTCTCCTCACA+CGG | - | chr1_2:33192314-33192333 | Msa0067890:three_prime_UTR | 55.0% | |
GATTGGTGTGTTCAACGGCG+AGG | + | chr1_2:33192400-33192419 | None:intergenic | 55.0% | |
TGGCAGTTGGGAAGCTCGAA+TGG | - | chr1_2:33193434-33193453 | Msa0067890:CDS | 55.0% | |
GGCAGTTGGGAAGCTCGAAT+GGG | - | chr1_2:33193435-33193454 | Msa0067890:CDS | 55.0% | |
CAGGGTAACCATCATCCTCC+AGG | + | chr1_2:33193730-33193749 | None:intergenic | 55.0% | |
CATGCGCCTAGCACAGGATA+GGG | + | chr1_2:33193900-33193919 | None:intergenic | 55.0% | |
TCATGCGCCTAGCACAGGAT+AGG | + | chr1_2:33193901-33193920 | None:intergenic | 55.0% | |
ATCCTGTGCTAGGCGCATGA+AGG | - | chr1_2:33193901-33193920 | Msa0067890:intron | 55.0% | |
CATGAAGGAGGCCAAGAGGA+AGG | - | chr1_2:33193916-33193935 | Msa0067890:intron | 55.0% | |
CTAGCAGCCGCTAAAGTAGC+TGG | - | chr1_2:33194388-33194407 | Msa0067890:intron | 55.0% | |
!! | CAGCTCGGTTGGTGAGCTAA+GGG | + | chr1_2:33194560-33194579 | None:intergenic | 55.0% |
! | TTGGTGATCCTCCTGAGGAG+AGG | - | chr1_2:33194706-33194725 | Msa0067890:CDS | 55.0% |
GCCAGATCAAACCTCTCCTC+AGG | + | chr1_2:33194720-33194739 | None:intergenic | 55.0% | |
GCGACAGACGAAACTCTAGC+AGG | + | chr1_2:33196712-33196731 | None:intergenic | 55.0% | |
GTGTTCAACGGCGAGGTCGA+CGG | + | chr1_2:33192393-33192412 | None:intergenic | 60.0% | |
CTCCTTCATGCGCCTAGCAC+AGG | + | chr1_2:33193906-33193925 | None:intergenic | 60.0% | |
CTGTGCTAGGCGCATGAAGG+AGG | - | chr1_2:33193904-33193923 | Msa0067890:intron | 60.0% | |
GTGGTCGAGGACAGCGCTAT+AGG | - | chr1_2:33194364-33194383 | Msa0067890:intron | 60.0% | |
!! | GCAGCTCGGTTGGTGAGCTA+AGG | + | chr1_2:33194561-33194580 | None:intergenic | 60.0% |
CACTACGAAGGCAGCTCGGT+TGG | + | chr1_2:33194571-33194590 | None:intergenic | 60.0% | |
ACCGAGCTGCCTTCGTAGTG+TGG | - | chr1_2:33194571-33194590 | Msa0067890:intron | 60.0% | |
CCCACACTACGAAGGCAGCT+CGG | + | chr1_2:33194575-33194594 | None:intergenic | 60.0% | |
CCGAGCTGCCTTCGTAGTGT+GGG | - | chr1_2:33194572-33194591 | Msa0067890:intron | 60.0% | |
TTCAACGGCGAGGTCGACGG+AGG | + | chr1_2:33192390-33192409 | None:intergenic | 65.0% | |
GGCGCATGAAGGAGGCCAAG+AGG | - | chr1_2:33193912-33193931 | Msa0067890:intron | 65.0% | |
! | GACGGCAAGGTGGCGGTGTG+AGG | + | chr1_2:33192366-33192385 | None:intergenic | 70.0% |
CGGAGGAGACGGCAAGGTGG+CGG | + | chr1_2:33192373-33192392 | None:intergenic | 70.0% | |
CGACGGAGGAGACGGCAAGG+TGG | + | chr1_2:33192376-33192395 | None:intergenic | 70.0% | |
GGTCGACGGAGGAGACGGCA+AGG | + | chr1_2:33192379-33192398 | None:intergenic | 70.0% | |
GGCGAGGTCGACGGAGGAGA+CGG | + | chr1_2:33192384-33192403 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_2 | gene | 33192308 | 33198213 | 33192308 | ID=Msa0067890;Name=Msa0067890 |
chr1_2 | mRNA | 33192308 | 33198213 | 33192308 | ID=Msa0067890-mRNA-1;Parent=Msa0067890;Name=Msa0067890-mRNA-1;_AED=0.24;_eAED=0.24;_QI=0|0.46|0.57|1|0.92|0.85|14|300|431 |
chr1_2 | exon | 33192308 | 33192678 | 33192308 | ID=Msa0067890-mRNA-1:exon:10931;Parent=Msa0067890-mRNA-1 |
chr1_2 | exon | 33193381 | 33193463 | 33193381 | ID=Msa0067890-mRNA-1:exon:10930;Parent=Msa0067890-mRNA-1 |
chr1_2 | exon | 33193777 | 33193873 | 33193777 | ID=Msa0067890-mRNA-1:exon:10929;Parent=Msa0067890-mRNA-1 |
chr1_2 | exon | 33193964 | 33194120 | 33193964 | ID=Msa0067890-mRNA-1:exon:10928;Parent=Msa0067890-mRNA-1 |
chr1_2 | exon | 33194591 | 33194633 | 33194591 | ID=Msa0067890-mRNA-1:exon:10927;Parent=Msa0067890-mRNA-1 |
chr1_2 | exon | 33194693 | 33194760 | 33194693 | ID=Msa0067890-mRNA-1:exon:10926;Parent=Msa0067890-mRNA-1 |
chr1_2 | exon | 33194859 | 33194926 | 33194859 | ID=Msa0067890-mRNA-1:exon:10925;Parent=Msa0067890-mRNA-1 |
chr1_2 | exon | 33195204 | 33195281 | 33195204 | ID=Msa0067890-mRNA-1:exon:10924;Parent=Msa0067890-mRNA-1 |
chr1_2 | exon | 33195774 | 33195865 | 33195774 | ID=Msa0067890-mRNA-1:exon:10923;Parent=Msa0067890-mRNA-1 |
chr1_2 | exon | 33196084 | 33196164 | 33196084 | ID=Msa0067890-mRNA-1:exon:10922;Parent=Msa0067890-mRNA-1 |
chr1_2 | exon | 33197046 | 33197191 | 33197046 | ID=Msa0067890-mRNA-1:exon:10921;Parent=Msa0067890-mRNA-1 |
chr1_2 | exon | 33197274 | 33197361 | 33197274 | ID=Msa0067890-mRNA-1:exon:10920;Parent=Msa0067890-mRNA-1 |
chr1_2 | exon | 33197443 | 33197473 | 33197443 | ID=Msa0067890-mRNA-1:exon:10919;Parent=Msa0067890-mRNA-1 |
chr1_2 | exon | 33198021 | 33198213 | 33198021 | ID=Msa0067890-mRNA-1:exon:10918;Parent=Msa0067890-mRNA-1 |
chr1_2 | CDS | 33198021 | 33198213 | 33198021 | ID=Msa0067890-mRNA-1:cds;Parent=Msa0067890-mRNA-1 |
chr1_2 | CDS | 33197443 | 33197473 | 33197443 | ID=Msa0067890-mRNA-1:cds;Parent=Msa0067890-mRNA-1 |
chr1_2 | CDS | 33197274 | 33197361 | 33197274 | ID=Msa0067890-mRNA-1:cds;Parent=Msa0067890-mRNA-1 |
chr1_2 | CDS | 33197046 | 33197191 | 33197046 | ID=Msa0067890-mRNA-1:cds;Parent=Msa0067890-mRNA-1 |
chr1_2 | CDS | 33196084 | 33196164 | 33196084 | ID=Msa0067890-mRNA-1:cds;Parent=Msa0067890-mRNA-1 |
chr1_2 | CDS | 33195774 | 33195865 | 33195774 | ID=Msa0067890-mRNA-1:cds;Parent=Msa0067890-mRNA-1 |
chr1_2 | CDS | 33195204 | 33195281 | 33195204 | ID=Msa0067890-mRNA-1:cds;Parent=Msa0067890-mRNA-1 |
chr1_2 | CDS | 33194859 | 33194926 | 33194859 | ID=Msa0067890-mRNA-1:cds;Parent=Msa0067890-mRNA-1 |
chr1_2 | CDS | 33194693 | 33194760 | 33194693 | ID=Msa0067890-mRNA-1:cds;Parent=Msa0067890-mRNA-1 |
chr1_2 | CDS | 33194591 | 33194633 | 33194591 | ID=Msa0067890-mRNA-1:cds;Parent=Msa0067890-mRNA-1 |
chr1_2 | CDS | 33193964 | 33194120 | 33193964 | ID=Msa0067890-mRNA-1:cds;Parent=Msa0067890-mRNA-1 |
chr1_2 | CDS | 33193777 | 33193873 | 33193777 | ID=Msa0067890-mRNA-1:cds;Parent=Msa0067890-mRNA-1 |
chr1_2 | CDS | 33193381 | 33193463 | 33193381 | ID=Msa0067890-mRNA-1:cds;Parent=Msa0067890-mRNA-1 |
chr1_2 | CDS | 33192608 | 33192678 | 33192608 | ID=Msa0067890-mRNA-1:cds;Parent=Msa0067890-mRNA-1 |
chr1_2 | three_prime_UTR | 33192308 | 33192607 | 33192308 | ID=Msa0067890-mRNA-1:three_prime_utr;Parent=Msa0067890-mRNA-1 |
Gene Sequence |
Protein sequence |