Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0136000 | sp|P93039|NAT4_ARATH | 69.143 | 525 | 156 | 3 | 13 | 534 | 4 | 525 | 0.0 | 712 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0136000 | A0A072VRF8 | 96.262 | 535 | 12 | 2 | 1 | 535 | 1 | 527 | 0.0 | 1026 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004940 | Msa0136000 | 0.804691 | 1.913284e-49 | -8.615850e-47 |
| Msa0004990 | Msa0136000 | 0.817894 | 2.602262e-52 | -8.615850e-47 |
| Msa0005560 | Msa0136000 | 0.804312 | 2.295037e-49 | -8.615850e-47 |
| Msa0016080 | Msa0136000 | 0.800267 | 1.561318e-48 | -8.615850e-47 |
| Msa0024650 | Msa0136000 | 0.829198 | 5.885748e-55 | -8.615850e-47 |
| Msa0025560 | Msa0136000 | 0.800286 | 1.547772e-48 | -8.615850e-47 |
| Msa0025570 | Msa0136000 | 0.800091 | 1.695329e-48 | -8.615850e-47 |
| Msa0028690 | Msa0136000 | 0.852608 | 4.129442e-61 | -8.615850e-47 |
| Msa0038010 | Msa0136000 | 0.800509 | 1.394013e-48 | -8.615850e-47 |
| Msa0041630 | Msa0136000 | 0.898604 | 4.506723e-77 | -8.615850e-47 |
| Msa0053040 | Msa0136000 | 0.827057 | 1.930222e-54 | -8.615850e-47 |
| Msa0060410 | Msa0136000 | 0.818918 | 1.525501e-52 | -8.615850e-47 |
| Msa0072180 | Msa0136000 | 0.800991 | 1.111560e-48 | -8.615850e-47 |
| Msa0089190 | Msa0136000 | 0.972552 | 5.948522e-135 | -8.615850e-47 |
| Msa0093820 | Msa0136000 | 0.807182 | 5.726100e-50 | -8.615850e-47 |
| Msa0098380 | Msa0136000 | 0.807540 | 4.809323e-50 | -8.615850e-47 |
| Msa0111780 | Msa0136000 | 0.806287 | 8.850194e-50 | -8.615850e-47 |
| Msa0117650 | Msa0136000 | 0.822902 | 1.847628e-53 | -8.615850e-47 |
| Msa0119240 | Msa0136000 | 0.848416 | 6.214698e-60 | -8.615850e-47 |
| Msa0120450 | Msa0136000 | 0.809969 | 1.454927e-50 | -8.615850e-47 |
| Msa0136000 | Msa0136090 | 0.833179 | 6.187649e-56 | -8.615850e-47 |
| Msa0136000 | Msa0163670 | 0.813318 | 2.719435e-51 | -8.615850e-47 |
| Msa0136000 | Msa0163690 | 0.837517 | 4.961746e-57 | -8.615850e-47 |
| Msa0136000 | Msa0168750 | 0.847112 | 1.421207e-59 | -8.615850e-47 |
| Msa0136000 | Msa0171740 | 0.801545 | 8.561719e-49 | -8.615850e-47 |
| Msa0136000 | Msa0175060 | 0.811628 | 6.366149e-51 | -8.615850e-47 |
| Msa0136000 | Msa0180380 | 0.804633 | 1.966861e-49 | -8.615850e-47 |
| Msa0136000 | Msa0189990 | 0.841857 | 3.684357e-58 | -8.615850e-47 |
| Msa0136000 | Msa0193950 | 0.831485 | 1.624938e-55 | -8.615850e-47 |
| Msa0136000 | Msa0206370 | 0.804844 | 1.777161e-49 | -8.615850e-47 |
| Msa0136000 | Msa0223040 | 0.804781 | 1.832410e-49 | -8.615850e-47 |
| Msa0136000 | Msa0235820 | 0.826560 | 2.537194e-54 | -8.615850e-47 |
| Msa0136000 | Msa0244310 | 0.828544 | 8.476972e-55 | -8.615850e-47 |
| Msa0136000 | Msa0247780 | 0.830768 | 2.438181e-55 | -8.615850e-47 |
| Msa0136000 | Msa0264230 | 0.802007 | 6.880533e-49 | -8.615850e-47 |
| Msa0136000 | Msa0275730 | 0.805833 | 1.102930e-49 | -8.615850e-47 |
| Msa0136000 | Msa0282830 | 0.827710 | 1.345926e-54 | -8.615850e-47 |
| Msa0136000 | Msa0283620 | 0.817805 | 2.725507e-52 | -8.615850e-47 |
| Msa0136000 | Msa0286360 | 0.844396 | 7.760124e-59 | -8.615850e-47 |
| Msa0136000 | Msa0307740 | 0.862600 | 4.517285e-64 | -8.615850e-47 |
| Msa0136000 | Msa0314240 | 0.827484 | 1.525114e-54 | -8.615850e-47 |
| Msa0136000 | Msa0321240 | 0.824626 | 7.288140e-54 | -8.615850e-47 |
| Msa0136000 | Msa0325260 | 0.825212 | 5.300315e-54 | -8.615850e-47 |
| Msa0136000 | Msa0336460 | 0.812366 | 4.395744e-51 | -8.615850e-47 |
| Msa0136000 | Msa0354600 | 0.807836 | 4.160268e-50 | -8.615850e-47 |
| Msa0136000 | Msa0356240 | 0.804559 | 2.038102e-49 | -8.615850e-47 |
| Msa0136000 | Msa0356270 | 0.829385 | 5.301113e-55 | -8.615850e-47 |
| Msa0136000 | Msa0357470 | 0.838180 | 3.351973e-57 | -8.615850e-47 |
| Msa0136000 | Msa0357510 | 0.835027 | 2.130297e-56 | -8.615850e-47 |
| Msa0136000 | Msa0357530 | 0.837762 | 4.293106e-57 | -8.615850e-47 |
| Msa0136000 | Msa0357550 | 0.804259 | 2.354015e-49 | -8.615850e-47 |
| Msa0136000 | Msa0357560 | 0.822520 | 2.266562e-53 | -8.615850e-47 |
| Msa0136000 | Msa0364900 | 0.802535 | 5.356456e-49 | -8.615850e-47 |
| Msa0136000 | Msa0375620 | 0.802143 | 6.451736e-49 | -8.615850e-47 |
| Msa0136000 | Msa0415010 | 0.804350 | 2.253089e-49 | -8.615850e-47 |
| Msa0136000 | Msa0418230 | 0.825759 | 3.934966e-54 | -8.615850e-47 |
| Msa0136000 | Msa0423630 | 0.812295 | 4.556005e-51 | -8.615850e-47 |
| Msa0136000 | Msa0433090 | 0.801993 | 6.926183e-49 | -8.615850e-47 |
| Msa0136000 | Msa0459930 | 0.810464 | 1.137719e-50 | -8.615850e-47 |
| Msa0136000 | Msa0464620 | 0.839137 | 1.897212e-57 | -8.615850e-47 |
| Msa0136000 | Msa0487110 | 0.801463 | 8.899917e-49 | -8.615850e-47 |
| Msa0136000 | Msa0510050 | 0.819087 | 1.396073e-52 | -8.615850e-47 |
| Msa0136000 | Msa0524710 | 0.816225 | 6.170000e-52 | -8.615850e-47 |
| Msa0136000 | Msa0540640 | 0.801044 | 1.083866e-48 | -8.615850e-47 |
| Msa0136000 | Msa0547370 | 0.844395 | 7.763783e-59 | -8.615850e-47 |
| Msa0136000 | Msa0557240 | 0.856782 | 2.549338e-62 | -8.615850e-47 |
| Msa0136000 | Msa0561830 | 0.842172 | 3.041569e-58 | -8.615850e-47 |
| Msa0136000 | Msa0566280 | 0.801490 | 8.784791e-49 | -8.615850e-47 |
| Msa0136000 | Msa0566490 | 0.823503 | 1.337295e-53 | -8.615850e-47 |
| Msa0136000 | Msa0567330 | 0.801623 | 8.250237e-49 | -8.615850e-47 |
| Msa0136000 | Msa0567570 | 0.811790 | 5.870597e-51 | -8.615850e-47 |
| Msa0136000 | Msa0587930 | 0.809585 | 1.759116e-50 | -8.615850e-47 |
| Msa0136000 | Msa0597800 | 0.843627 | 1.247411e-58 | -8.615850e-47 |
| Msa0136000 | Msa0597820 | 0.832252 | 1.050755e-55 | -8.615850e-47 |
| Msa0136000 | Msa0602100 | 0.834327 | 3.196021e-56 | -8.615850e-47 |
| Msa0136000 | Msa0622890 | 0.825642 | 4.193483e-54 | -8.615850e-47 |
| Msa0136000 | Msa0637590 | 0.812131 | 4.946846e-51 | -8.615850e-47 |
| Msa0136000 | Msa0637700 | 0.807551 | 4.782724e-50 | -8.615850e-47 |
| Msa0136000 | Msa0643230 | 0.832556 | 8.838600e-56 | -8.615850e-47 |
| Msa0136000 | Msa0652590 | 0.831453 | 1.655199e-55 | -8.615850e-47 |
| Msa0136000 | Msa0655370 | 0.845477 | 3.963674e-59 | -8.615850e-47 |
| Msa0136000 | Msa0658150 | 0.841271 | 5.259289e-58 | -8.615850e-47 |
| Msa0136000 | Msa0679220 | 0.827971 | 1.164824e-54 | -8.615850e-47 |
| Msa0136000 | Msa0682910 | 0.822311 | 2.535088e-53 | -8.615850e-47 |
| Msa0136000 | Msa0686830 | 0.801188 | 1.013008e-48 | -8.615850e-47 |
| Msa0136000 | Msa0699170 | 0.815577 | 8.608523e-52 | -8.615850e-47 |
| Msa0136000 | Msa0703000 | 0.841533 | 4.486561e-58 | -8.615850e-47 |
| Msa0136000 | Msa0714230 | -0.810374 | 1.189724e-50 | -8.615850e-47 |
| Msa0136000 | Msa0724860 | 0.800025 | 1.748526e-48 | -8.615850e-47 |
| Msa0136000 | Msa0730890 | 0.803026 | 4.242339e-49 | -8.615850e-47 |
| Msa0136000 | Msa0743370 | 0.803974 | 2.698095e-49 | -8.615850e-47 |
| Msa0136000 | Msa0747710 | 0.826693 | 2.357980e-54 | -8.615850e-47 |
| Msa0136000 | Msa0750830 | 0.816281 | 5.995685e-52 | -8.615850e-47 |
| Msa0136000 | Msa0769540 | 0.828597 | 8.229511e-55 | -8.615850e-47 |
| Msa0136000 | Msa0773030 | 0.867071 | 1.792565e-65 | -8.615850e-47 |
| Msa0136000 | Msa0774660 | 0.803518 | 3.355432e-49 | -8.615850e-47 |
| Msa0136000 | Msa0800150 | 0.835480 | 1.637611e-56 | -8.615850e-47 |
| Msa0136000 | Msa0810330 | 0.852015 | 6.088547e-61 | -8.615850e-47 |
| Msa0136000 | Msa0812720 | 0.830500 | 2.835475e-55 | -8.615850e-47 |
| Msa0136000 | Msa0831310 | 0.806518 | 7.912534e-50 | -8.615850e-47 |
| Msa0136000 | Msa0850640 | 0.876016 | 1.952118e-68 | -8.615850e-47 |
| Msa0136000 | Msa0853080 | 0.812348 | 4.436125e-51 | -8.615850e-47 |
| Msa0136000 | Msa0904590 | 0.816488 | 5.389536e-52 | -8.615850e-47 |
| Msa0136000 | Msa0907880 | 0.838674 | 2.498582e-57 | -8.615850e-47 |
| Msa0136000 | Msa0910560 | 0.802471 | 5.523332e-49 | -8.615850e-47 |
| Msa0136000 | Msa1007900 | 0.812370 | 4.387859e-51 | -8.615850e-47 |
| Msa0136000 | Msa1019420 | 0.811665 | 6.248667e-51 | -8.615850e-47 |
| Msa0136000 | Msa1029860 | 0.806378 | 8.470580e-50 | -8.615850e-47 |
| Msa0136000 | Msa1031060 | 0.848209 | 7.090563e-60 | -8.615850e-47 |
| Msa0136000 | Msa1040330 | 0.801836 | 7.460800e-49 | -8.615850e-47 |
| Msa0136000 | Msa1042300 | 0.802659 | 5.051407e-49 | -8.615850e-47 |
| Msa0136000 | Msa1062290 | 0.821527 | 3.851155e-53 | -8.615850e-47 |
| Msa0136000 | Msa1075090 | 0.803148 | 4.001976e-49 | -8.615850e-47 |
| Msa0136000 | Msa1092310 | 0.801516 | 8.677930e-49 | -8.615850e-47 |
| Msa0136000 | Msa1099650 | 0.814374 | 1.591726e-51 | -8.615850e-47 |
| Msa0136000 | Msa1103450 | 0.812319 | 4.501702e-51 | -8.615850e-47 |
| Msa0136000 | Msa1107220 | 0.820204 | 7.761985e-53 | -8.615850e-47 |
| Msa0136000 | Msa1107520 | 0.821415 | 4.087980e-53 | -8.615850e-47 |
| Msa0136000 | Msa1108560 | 0.803493 | 3.395472e-49 | -8.615850e-47 |
| Msa0136000 | Msa1119670 | 0.839928 | 1.181284e-57 | -8.615850e-47 |
| Msa0136000 | Msa1120960 | 0.805070 | 1.593919e-49 | -8.615850e-47 |
| Msa0136000 | Msa1136630 | 0.816363 | 5.747314e-52 | -8.615850e-47 |
| Msa0136000 | Msa1136690 | 0.817117 | 3.893564e-52 | -8.615850e-47 |
| Msa0136000 | Msa1140930 | 0.800441 | 1.439355e-48 | -8.615850e-47 |
| Msa0136000 | Msa1154060 | 0.816235 | 6.138362e-52 | -8.615850e-47 |
| Msa0136000 | Msa1154320 | 0.802680 | 5.001349e-49 | -8.615850e-47 |
| Msa0136000 | Msa1160540 | 0.824089 | 9.748362e-54 | -8.615850e-47 |
| Msa0136000 | Msa1183870 | 0.808100 | 3.655322e-50 | -8.615850e-47 |
| Msa0136000 | Msa1191270 | 0.824958 | 6.085729e-54 | -8.615850e-47 |
| Msa0136000 | Msa1193940 | 0.802535 | 5.358063e-49 | -8.615850e-47 |
| Msa0136000 | Msa1202800 | 0.803064 | 4.166436e-49 | -8.615850e-47 |
| Msa0136000 | Msa1203650 | 0.806716 | 7.185614e-50 | -8.615850e-47 |
| Msa0136000 | Msa1208050 | 0.802401 | 5.708725e-49 | -8.615850e-47 |
| Msa0136000 | Msa1211940 | 0.869297 | 3.442244e-66 | -8.615850e-47 |
| Msa0136000 | Msa1212080 | 0.863390 | 2.576477e-64 | -8.615850e-47 |
| Msa0136000 | Msa1215540 | -0.810324 | 1.220021e-50 | -8.615850e-47 |
| Msa0136000 | Msa1223710 | 0.809994 | 1.437229e-50 | -8.615850e-47 |
| Msa0136000 | Msa1223960 | 0.815475 | 9.073233e-52 | -8.615850e-47 |
| Msa0136000 | Msa1223990 | 0.818545 | 1.853660e-52 | -8.615850e-47 |
| Msa0136000 | Msa1241960 | 0.812388 | 4.347171e-51 | -8.615850e-47 |
| Msa0136000 | Msa1263110 | 0.821984 | 3.019436e-53 | -8.615850e-47 |
| Msa0136000 | Msa1268360 | 0.809607 | 1.740705e-50 | -8.615850e-47 |
| Msa0136000 | Msa1269200 | 0.808977 | 2.375947e-50 | -8.615850e-47 |
| Msa0136000 | Msa1273320 | 0.819266 | 1.270927e-52 | -8.615850e-47 |
| Msa0136000 | Msa1283070 | 0.816239 | 6.125435e-52 | -8.615850e-47 |
| Msa0136000 | Msa1300570 | 0.802492 | 5.467223e-49 | -8.615850e-47 |
| Msa0136000 | Msa1303400 | 0.822606 | 2.165449e-53 | -8.615850e-47 |
| Msa0136000 | Msa1320160 | 0.827941 | 1.184252e-54 | -8.615850e-47 |
| Msa0136000 | Msa1321010 | 0.814162 | 1.772801e-51 | -8.615850e-47 |
| Msa0136000 | Msa1322380 | 0.800610 | 1.329352e-48 | -8.615850e-47 |
| Msa0136000 | Msa1338510 | 0.826471 | 2.664224e-54 | -8.615850e-47 |
| Msa0136000 | Msa1344450 | 0.962244 | 1.202094e-120 | -8.615850e-47 |
| Msa0136000 | Msa1376880 | 0.820227 | 7.666191e-53 | -8.615850e-47 |
| Msa0136000 | Msa1377190 | 0.818817 | 1.608267e-52 | -8.615850e-47 |
| Msa0136000 | Msa1384130 | 0.834896 | 2.299492e-56 | -8.615850e-47 |
| Msa0136000 | Msa1395080 | 0.841482 | 4.627599e-58 | -8.615850e-47 |
| Msa0136000 | Msa1399030 | 0.803541 | 3.319488e-49 | -8.615850e-47 |
| Msa0136000 | Msa1404810 | -0.805973 | 1.030404e-49 | -8.615850e-47 |
| Msa0136000 | Msa1407810 | 0.813010 | 3.177512e-51 | -8.615850e-47 |
| Msa0136000 | Msa1413450 | 0.852776 | 3.696386e-61 | -8.615850e-47 |
| Msa0136000 | Msa1417220 | 0.815393 | 9.459360e-52 | -8.615850e-47 |
| Msa0136000 | Msa1430950 | 0.867510 | 1.297820e-65 | -8.615850e-47 |
| Msa0136000 | Msa1433360 | 0.818876 | 1.559071e-52 | -8.615850e-47 |
| Msa0136000 | Msa1437590 | 0.818243 | 2.169857e-52 | -8.615850e-47 |
| Msa0136000 | Msa1437780 | 0.814129 | 1.803245e-51 | -8.615850e-47 |
| Msa0136000 | Msa1462610 | 0.800398 | 1.468285e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0136000 | MtrunA17_Chr1g0207021 | 96.262 | 535 | 12 | 2 | 1 | 535 | 1 | 527 | 0.0 | 1026 |
| Msa0136000 | MtrunA17_Chr3g0117941 | 60.264 | 531 | 205 | 3 | 7 | 534 | 4 | 531 | 0.0 | 659 |
| Msa0136000 | MtrunA17_Chr8g0364611 | 59.850 | 533 | 205 | 4 | 8 | 534 | 3 | 532 | 0.0 | 654 |
| Msa0136000 | MtrunA17_Chr4g0059331 | 59.699 | 531 | 208 | 3 | 7 | 534 | 4 | 531 | 0.0 | 653 |
| Msa0136000 | MtrunA17_Chr5g0414131 | 59.125 | 526 | 208 | 5 | 13 | 534 | 15 | 537 | 0.0 | 624 |
| Msa0136000 | MtrunA17_Chr3g0134911 | 54.645 | 549 | 209 | 6 | 20 | 534 | 42 | 584 | 0.0 | 602 |
| Msa0136000 | MtrunA17_Chr8g0379171 | 53.802 | 526 | 234 | 4 | 13 | 535 | 5 | 524 | 0.0 | 581 |
| Msa0136000 | MtrunA17_Chr5g0405471 | 54.412 | 544 | 218 | 7 | 13 | 534 | 26 | 561 | 0.0 | 579 |
| Msa0136000 | MtrunA17_Chr2g0284061 | 54.423 | 520 | 227 | 5 | 20 | 535 | 11 | 524 | 0.0 | 577 |
| Msa0136000 | MtrunA17_Chr3g0119521 | 55.598 | 518 | 221 | 4 | 20 | 533 | 6 | 518 | 0.0 | 562 |
| Msa0136000 | MtrunA17_Chr1g0154001 | 51.938 | 516 | 241 | 4 | 21 | 534 | 36 | 546 | 2.52e-180 | 518 |
| Msa0136000 | MtrunA17_Chr8g0367361 | 32.768 | 531 | 302 | 7 | 42 | 532 | 253 | 768 | 2.85e-94 | 304 |
| Msa0136000 | MtrunA17_Chr5g0412181 | 32.897 | 535 | 316 | 7 | 28 | 528 | 168 | 693 | 1.01e-92 | 298 |
| Msa0136000 | MtrunA17_Chr2g0320981 | 31.911 | 539 | 318 | 10 | 32 | 532 | 151 | 678 | 1.08e-86 | 281 |
| Msa0136000 | MtrunA17_Chr4g0027121 | 31.810 | 525 | 312 | 8 | 45 | 532 | 171 | 686 | 8.56e-85 | 276 |
| Msa0136000 | MtrunA17_Chr2g0332871 | 31.384 | 513 | 289 | 12 | 48 | 532 | 166 | 643 | 1.49e-76 | 254 |
| Msa0136000 | MtrunA17_Chr8g0379181 | 51.852 | 54 | 26 | 0 | 408 | 461 | 7 | 60 | 3.32e-12 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0136000 | AT1G49960.1 | 69.143 | 525 | 156 | 3 | 13 | 534 | 4 | 525 | 0.0 | 712 |
| Msa0136000 | AT5G62890.1 | 60.075 | 531 | 206 | 4 | 7 | 534 | 4 | 531 | 0.0 | 648 |
| Msa0136000 | AT5G62890.2 | 60.075 | 531 | 206 | 4 | 7 | 534 | 4 | 531 | 0.0 | 648 |
| Msa0136000 | AT5G62890.3 | 60.075 | 531 | 206 | 4 | 7 | 534 | 4 | 531 | 0.0 | 648 |
| Msa0136000 | AT1G60030.1 | 58.286 | 525 | 213 | 4 | 13 | 534 | 16 | 537 | 0.0 | 636 |
| Msa0136000 | AT1G10540.1 | 56.629 | 528 | 220 | 4 | 13 | 534 | 14 | 538 | 0.0 | 622 |
| Msa0136000 | AT5G49990.2 | 57.728 | 537 | 214 | 4 | 1 | 534 | 1 | 527 | 0.0 | 604 |
| Msa0136000 | AT5G49990.3 | 57.728 | 537 | 214 | 4 | 1 | 534 | 1 | 527 | 0.0 | 604 |
| Msa0136000 | AT5G49990.1 | 57.728 | 537 | 214 | 4 | 1 | 534 | 1 | 527 | 0.0 | 604 |
| Msa0136000 | AT5G49990.4 | 57.728 | 537 | 214 | 4 | 1 | 534 | 1 | 527 | 0.0 | 604 |
| Msa0136000 | AT1G65550.1 | 52.820 | 532 | 236 | 5 | 13 | 534 | 14 | 540 | 0.0 | 587 |
| Msa0136000 | AT2G34190.1 | 55.385 | 520 | 222 | 5 | 20 | 535 | 11 | 524 | 0.0 | 582 |
| Msa0136000 | AT5G62890.4 | 61.135 | 458 | 172 | 4 | 7 | 461 | 4 | 458 | 0.0 | 558 |
| Msa0136000 | AT2G05760.1 | 52.896 | 518 | 235 | 4 | 20 | 533 | 6 | 518 | 0.0 | 551 |
| Msa0136000 | AT2G26510.1 | 50.677 | 517 | 248 | 4 | 21 | 534 | 36 | 548 | 3.47e-176 | 508 |
| Msa0136000 | AT1G10540.2 | 57.407 | 378 | 152 | 4 | 13 | 384 | 14 | 388 | 3.44e-150 | 436 |
| Msa0136000 | AT5G25420.1 | 45.374 | 454 | 178 | 4 | 13 | 465 | 26 | 410 | 1.43e-133 | 394 |
| Msa0136000 | AT2G26510.3 | 52.589 | 367 | 168 | 3 | 21 | 384 | 36 | 399 | 9.85e-124 | 369 |
| Msa0136000 | AT2G26510.2 | 51.977 | 354 | 164 | 3 | 21 | 371 | 36 | 386 | 1.91e-116 | 351 |
| Msa0136000 | AT4G38050.1 | 33.026 | 542 | 306 | 8 | 32 | 532 | 179 | 704 | 4.29e-85 | 278 |
| Msa0136000 | AT2G27810.1 | 32.605 | 549 | 322 | 9 | 22 | 532 | 163 | 701 | 3.49e-84 | 276 |
| Msa0136000 | AT2G27810.4 | 31.763 | 573 | 319 | 11 | 22 | 532 | 163 | 725 | 1.20e-79 | 264 |
| Msa0136000 | AT2G27810.2 | 34.180 | 433 | 257 | 7 | 22 | 432 | 163 | 589 | 2.81e-69 | 233 |
| Msa0136000 | AT2G27810.3 | 34.456 | 386 | 225 | 7 | 22 | 385 | 163 | 542 | 1.34e-59 | 206 |
Find 137 sgRNAs with CRISPR-Local
Find 249 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATAGATTATCTGTTGTTTA+AGG | 0.174437 | 1_3:-67784350 | Msa0136000:three_prime_UTR |
| CACTATTCTTGTTCCTTTGA+TGG | 0.198717 | 1_3:-67788181 | Msa0136000:CDS |
| TCTTCCTGCATTGGTTATTC+TGG | 0.207207 | 1_3:-67787292 | Msa0136000:CDS |
| GTTTATAAATCAGGTAAATT+TGG | 0.217881 | 1_3:-67785313 | Msa0136000:intron |
| CAATACACGGCTGCTATTAT+TGG | 0.243252 | 1_3:+67785265 | None:intergenic |
| TGAAATAAATGAGTGCATTT+AGG | 0.262305 | 1_3:+67784519 | None:intergenic |
| AATTATAGTTGCTTACTTCT+TGG | 0.265429 | 1_3:-67784686 | Msa0136000:CDS |
| CTCGAATATCTCACACTATC+TGG | 0.311355 | 1_3:-67784873 | Msa0136000:CDS |
| TCCTTTGTTCAAGGAATGAT+TGG | 0.311355 | 1_3:-67787691 | Msa0136000:CDS |
| CAGATTATTGCAATAGTTGT+AGG | 0.331238 | 1_3:-67784406 | Msa0136000:three_prime_UTR |
| GGTGAAAGTGGTGGTGGTGG+TGG | 0.333045 | 1_3:-67788459 | Msa0136000:CDS |
| ACTCTTCTGGATGCCTTGTT+TGG | 0.337176 | 1_3:-67785856 | Msa0136000:CDS |
| CTTATTGCTTCCTTTGTTCA+AGG | 0.341648 | 1_3:-67787700 | Msa0136000:CDS |
| GCCTTGTTTGGTGCAGCAAC+TGG | 0.341775 | 1_3:-67785844 | Msa0136000:CDS |
| ACTAGGCTTCCAGTGGTTAT+AGG | 0.341886 | 1_3:-67787978 | Msa0136000:CDS |
| TTAGGGTATAGGCACTCTTC+TGG | 0.345374 | 1_3:-67785869 | Msa0136000:intron |
| GTTCCCCTTGTAACTCTAAC+TGG | 0.347094 | 1_3:-67787486 | Msa0136000:CDS |
| TCTAGTATATCTACACAAAT+AGG | 0.351405 | 1_3:-67784445 | Msa0136000:three_prime_UTR |
| GACAGACCTGACGAGGATTA+AGG | 0.355818 | 1_3:+67787892 | None:intergenic |
| AATCTCTTGTAACAGTCAAC+TGG | 0.358889 | 1_3:-67786059 | Msa0136000:intron |
| TACTTAGCCGCGGTGTTGGC+TGG | 0.363924 | 1_3:-67785983 | Msa0136000:CDS |
| GGACATGGCCCTGCTCATAC+TGG | 0.367899 | 1_3:-67784852 | Msa0136000:CDS |
| TTCATCGCTGCATCAAGATT+TGG | 0.370746 | 1_3:-67786032 | Msa0136000:CDS |
| TTACTGTTGATTGCTGTGTT+AGG | 0.377345 | 1_3:-67788392 | Msa0136000:CDS |
| GGCCTAGGACTCTTTGTGAT+AGG | 0.379791 | 1_3:-67787465 | Msa0136000:CDS |
| TGAGCAGCTTCAGCTGGACT+TGG | 0.390320 | 1_3:-67784987 | Msa0136000:intron |
| CAACATTACATTGTTATGCT+TGG | 0.391706 | 1_3:-67788222 | Msa0136000:CDS |
| TATACTAGAAACTATGAGAT+TGG | 0.394869 | 1_3:+67784459 | None:intergenic |
| AGTTGCCGTACTGACCGATC+TGG | 0.396352 | 1_3:-67786759 | Msa0136000:CDS |
| ACTATTCTTGTTCCTTTGAT+GGG | 0.400549 | 1_3:-67788180 | Msa0136000:CDS |
| GTGTTAGGAGCTCACCTTCA+TGG | 0.405039 | 1_3:-67788377 | Msa0136000:CDS |
| GCTGGTGAAAGTGGTGGTGG+TGG | 0.405192 | 1_3:-67788462 | Msa0136000:CDS |
| AGTTTGATGATTTAGGGTAT+AGG | 0.429815 | 1_3:-67785880 | Msa0136000:intron |
| GCCTAGGACTCTTTGTGATA+GGG | 0.430014 | 1_3:-67787464 | Msa0136000:CDS |
| AGTCAAAATGCAGGATTGTT+GGG | 0.433330 | 1_3:-67785660 | Msa0136000:CDS |
| GAGTTCCGTATCCATTTCAA+TGG | 0.438140 | 1_3:-67786452 | Msa0136000:CDS |
| ATCAGAAGTGATGAGTTCTA+TGG | 0.440514 | 1_3:-67784577 | Msa0136000:CDS |
| CTGTGATGAGCAGCTTCAGC+TGG | 0.443945 | 1_3:-67784993 | Msa0136000:intron |
| ACTTCTGATATCCTGATTGA+AGG | 0.449917 | 1_3:+67784591 | None:intergenic |
| AAAATTCAGGACCTTCAATC+AGG | 0.451074 | 1_3:-67784602 | Msa0136000:CDS |
| TAGTCAAAATGCAGGATTGT+TGG | 0.453962 | 1_3:-67785661 | Msa0136000:CDS |
| TGTTGGGTCTAACACGCGTT+GGG | 0.454667 | 1_3:-67785644 | Msa0136000:CDS |
| TGCAGACATGGCTTGGAACT+AGG | 0.457743 | 1_3:-67787995 | Msa0136000:CDS |
| TTGGCAGATTGTGTTGAGAT+TGG | 0.458776 | 1_3:-67787315 | Msa0136000:CDS |
| CATCAAAGGAACAAGAATAG+TGG | 0.469158 | 1_3:+67788182 | None:intergenic |
| TCTGTACTTAGCCGCGGTGT+TGG | 0.469403 | 1_3:-67785987 | Msa0136000:CDS |
| TAGCCGCGGTGTTGGCTGGC+TGG | 0.472588 | 1_3:-67785979 | Msa0136000:intron |
| TGTGTTCTCTTTGCATATGT+CGG | 0.473198 | 1_3:-67785244 | Msa0136000:intron |
| AGTTCCGTATCCATTTCAAT+GGG | 0.475091 | 1_3:-67786451 | Msa0136000:CDS |
| ACAGTAAGTTGTTCCTTGAC+AGG | 0.477631 | 1_3:+67788408 | None:intergenic |
| ACTCTGTTGCAGACATGGCT+TGG | 0.479227 | 1_3:-67788002 | Msa0136000:CDS |
| TGTATTCCTTAATCCTCGTC+AGG | 0.479851 | 1_3:-67787898 | Msa0136000:intron |
| TGAGATTGGTCTTCCTGCAT+TGG | 0.479893 | 1_3:-67787301 | Msa0136000:CDS |
| CTAGGCCAGTTAGAGTTACA+AGG | 0.480139 | 1_3:+67787481 | None:intergenic |
| CTTGTTCCTTTGATGGGTGG+TGG | 0.483527 | 1_3:-67788174 | Msa0136000:CDS |
| AGTTGTTCCTTGACAGGATG+AGG | 0.494608 | 1_3:+67788414 | None:intergenic |
| ATACTAGAAACTATGAGATT+GGG | 0.495198 | 1_3:+67784460 | None:intergenic |
| ATATCACCAACATTGAAAGT+AGG | 0.500875 | 1_3:+67786423 | None:intergenic |
| TGCCCCTTGAATAGCTCTCA+TGG | 0.504533 | 1_3:+67787726 | None:intergenic |
| TTCTCTTGTTGCAATTGTAG+AGG | 0.505227 | 1_3:-67786382 | Msa0136000:intron |
| GAGAATGCCACAGAAATAGC+TGG | 0.506607 | 1_3:+67787933 | None:intergenic |
| GGTTAATTACTGCCGCTCCA+TGG | 0.508265 | 1_3:-67786737 | Msa0136000:intron |
| TATCACCAACATTGAAAGTA+GGG | 0.515321 | 1_3:+67786424 | None:intergenic |
| CTTGTAACTCTAACTGGCCT+AGG | 0.515850 | 1_3:-67787480 | Msa0136000:CDS |
| TCAACACTCTGTTGCAGACA+TGG | 0.520169 | 1_3:-67788007 | Msa0136000:CDS |
| TCTTTGTGATAGGGTTTCCA+AGG | 0.520833 | 1_3:-67787455 | Msa0136000:CDS |
| AGAGTCATTCAAATATCAGC+TGG | 0.521155 | 1_3:-67785615 | Msa0136000:CDS |
| ATGACCAGAATAACCAATGC+AGG | 0.528438 | 1_3:+67787288 | None:intergenic |
| TTTGCAGTCATAGTCACGAT+TGG | 0.530572 | 1_3:-67786855 | Msa0136000:CDS |
| TACAGATCAATGTTCATCGT+TGG | 0.532814 | 1_3:-67784936 | Msa0136000:CDS |
| GAGGTGGATCCAGTATGAGC+AGG | 0.532820 | 1_3:+67784843 | None:intergenic |
| TATTCTGGTCATCCTCTCCC+AGG | 0.534906 | 1_3:-67787277 | Msa0136000:intron |
| TCCAGTTGCTGCACCAAACA+AGG | 0.535138 | 1_3:+67785843 | None:intergenic |
| ACCCTATCACAAAGAGTCCT+AGG | 0.536299 | 1_3:+67787463 | None:intergenic |
| TCCAATCATTCCTTGAACAA+AGG | 0.540616 | 1_3:+67787690 | None:intergenic |
| GTTGCCGTACTGACCGATCT+GGG | 0.544476 | 1_3:-67786758 | Msa0136000:CDS |
| GGGAGCCCTACTTTCAATGT+TGG | 0.546761 | 1_3:-67786429 | Msa0136000:CDS |
| CAATCCATGAGAGCTATTCA+AGG | 0.546761 | 1_3:-67787730 | Msa0136000:CDS |
| AAAGATGCTCCTATAACCAC+TGG | 0.549867 | 1_3:+67787969 | None:intergenic |
| AATGAGTGCATTTAGGCTGA+AGG | 0.552105 | 1_3:+67784526 | None:intergenic |
| TAGTCACGATTGGAATTGCA+TGG | 0.554844 | 1_3:-67786845 | Msa0136000:CDS |
| TCTTATTCCAGCTATTTCTG+TGG | 0.555907 | 1_3:-67787940 | Msa0136000:CDS |
| CCCACTGTCACGGTGAGTTG+AGG | 0.557039 | 1_3:+67784639 | None:intergenic |
| ATTCTTGTTCCTTTGATGGG+TGG | 0.557666 | 1_3:-67788177 | Msa0136000:CDS |
| GCAGCTGGTGAAAGTGGTGG+TGG | 0.562807 | 1_3:-67788465 | Msa0136000:CDS |
| ATCGCTGCATCAAGATTTGG+CGG | 0.564712 | 1_3:-67786029 | Msa0136000:CDS |
| TCGTGACTATGACTGCAAAT+CGG | 0.567669 | 1_3:+67786859 | None:intergenic |
| CAGATAGTGTGAGATATTCG+AGG | 0.569216 | 1_3:+67784874 | None:intergenic |
| CCACAAAAGATTAAATCAAG+AGG | 0.575339 | 1_3:-67786888 | Msa0136000:CDS |
| ACCAGTGTCTCCCACTGTCA+CGG | 0.575457 | 1_3:+67784629 | None:intergenic |
| CGGCAGTAATTAACCCAGAT+CGG | 0.576534 | 1_3:+67786745 | None:intergenic |
| ATGAGTGCATTTAGGCTGAA+GGG | 0.578950 | 1_3:+67784527 | None:intergenic |
| GAAAGAGAAACAATGGCAGC+TGG | 0.580304 | 1_3:-67788480 | None:intergenic |
| AATCCATGAGAGCTATTCAA+GGG | 0.583596 | 1_3:-67787729 | Msa0136000:CDS |
| AGTCACGATTGGAATTGCAT+GGG | 0.588659 | 1_3:-67786844 | Msa0136000:CDS |
| ATGGGTTACTTACGCCATGA+AGG | 0.588819 | 1_3:+67788363 | None:intergenic |
| TAAAGTAACATACCTGGGAG+AGG | 0.589098 | 1_3:+67787265 | None:intergenic |
| ACCGTGACAGTGGGAGACAC+TGG | 0.589213 | 1_3:-67784630 | Msa0136000:CDS |
| TTATTGCATTTGCAGCTGAA+GGG | 0.589241 | 1_3:-67788260 | Msa0136000:intron |
| GCCTCAACTCACCGTGACAG+TGG | 0.591700 | 1_3:-67784640 | Msa0136000:CDS |
| ACGGCTGCTATTATTGGCAA+TGG | 0.594763 | 1_3:+67785271 | None:intergenic |
| CTTTGTGATAGGGTTTCCAA+GGG | 0.595097 | 1_3:-67787454 | Msa0136000:intron |
| AAGATATATATTTACCGAGG+TGG | 0.597288 | 1_3:+67784827 | None:intergenic |
| TTAACCCAGATCGGTCAGTA+CGG | 0.603808 | 1_3:+67786754 | None:intergenic |
| CCTCAACTCACCGTGACAGT+GGG | 0.606252 | 1_3:-67784639 | Msa0136000:CDS |
| CAAAATGTACACTGATGCGG+TGG | 0.607400 | 1_3:+67785819 | None:intergenic |
| AGGTGGATCCAGTATGAGCA+GGG | 0.613316 | 1_3:+67784844 | None:intergenic |
| ACAATGGCAGCTGGTGAAAG+TGG | 0.615031 | 1_3:-67788471 | Msa0136000:CDS |
| TTCCGTATCCATTTCAATGG+GGG | 0.618485 | 1_3:-67786449 | Msa0136000:CDS |
| ACATTGCCACCACCCATCAA+AGG | 0.619800 | 1_3:+67788168 | None:intergenic |
| TGCTCATACTGGATCCACCT+CGG | 0.622784 | 1_3:-67784841 | Msa0136000:intron |
| ATCTCTTGTAACAGTCAACT+GGG | 0.625026 | 1_3:-67786058 | Msa0136000:intron |
| AATAGTGGAAACAATGACAA+TGG | 0.627526 | 1_3:+67788197 | None:intergenic |
| TTGTTGGGTCTAACACGCGT+TGG | 0.628068 | 1_3:-67785645 | Msa0136000:CDS |
| GTCACGATTGGAATTGCATG+GGG | 0.628860 | 1_3:-67786843 | Msa0136000:CDS |
| CTACACAGACAGACCTGACG+AGG | 0.630435 | 1_3:+67787885 | None:intergenic |
| GTGACAGTGGGAGACACTGG+TGG | 0.631148 | 1_3:-67784627 | Msa0136000:CDS |
| ACACCGCGGCTAAGTACAGA+AGG | 0.633774 | 1_3:+67785990 | None:intergenic |
| AGATATTCGAGGAAATATTG+TGG | 0.636493 | 1_3:+67784885 | None:intergenic |
| GCTTGGAACTAGGCTTCCAG+TGG | 0.642697 | 1_3:-67787985 | Msa0136000:CDS |
| CCACCTTCTGTACTTAGCCG+CGG | 0.651344 | 1_3:-67785993 | Msa0136000:CDS |
| CAAGGGGAACAGCACTGAGA+GGG | 0.652878 | 1_3:+67787499 | None:intergenic |
| TGCAAAGAGAACACAATACA+CGG | 0.654533 | 1_3:+67785252 | None:intergenic |
| TATCTCACACTATCTGGACA+TGG | 0.661111 | 1_3:-67784867 | Msa0136000:CDS |
| TAGGCCAGTTAGAGTTACAA+GGG | 0.662208 | 1_3:+67787482 | None:intergenic |
| GGCGTGTTCACGACTCATAG+TGG | 0.664546 | 1_3:+67784660 | None:intergenic |
| TACCAAGACTGACCATGGAG+CGG | 0.672864 | 1_3:+67786725 | None:intergenic |
| ATCCATGAGAGCTATTCAAG+GGG | 0.676734 | 1_3:-67787728 | Msa0136000:CDS |
| TGACAGTGGGAGACACTGGT+GGG | 0.683936 | 1_3:-67784626 | Msa0136000:CDS |
| ACAAGGGGAACAGCACTGAG+AGG | 0.687831 | 1_3:+67787498 | None:intergenic |
| CAACAAAATGTACACTGATG+CGG | 0.695683 | 1_3:+67785816 | None:intergenic |
| CCGCGGCTAAGTACAGAAGG+TGG | 0.698072 | 1_3:+67785993 | None:intergenic |
| ATGGCAGCTGGTGAAAGTGG+TGG | 0.716876 | 1_3:-67788468 | Msa0136000:CDS |
| AGGCCAGTTAGAGTTACAAG+GGG | 0.717548 | 1_3:+67787483 | None:intergenic |
| GTTCCGTATCCATTTCAATG+GGG | 0.719924 | 1_3:-67786450 | Msa0136000:CDS |
| CAACTGAATTGAGTACTCAG+TGG | 0.730095 | 1_3:+67786777 | None:intergenic |
| GTACCAGCCAGCCAACACCG+CGG | 0.843946 | 1_3:+67785976 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAATTTTGTTATGTTTTG+AGG | - | chr1_3:67784725-67784744 | Msa0136000:CDS | 15.0% |
| !!! | TTAATTTTGTTATGTTTTGA+GGG | - | chr1_3:67784726-67784745 | Msa0136000:CDS | 15.0% |
| !! | TTGTTAAATAAATGATCATT+AGG | + | chr1_3:67785444-67785463 | None:intergenic | 15.0% |
| !! | TGTTTACAACTAAATATTAT+TGG | - | chr1_3:67786232-67786251 | Msa0136000:intron | 15.0% |
| !! | GTTTACAACTAAATATTATT+GGG | - | chr1_3:67786233-67786252 | Msa0136000:intron | 15.0% |
| !!! | TTTAATTTTTAGTTTCCATT+TGG | - | chr1_3:67786697-67786716 | Msa0136000:intron | 15.0% |
| !! | AAACCAAATTACAACAAAAT+GGG | + | chr1_3:67784470-67784489 | None:intergenic | 20.0% |
| !! | AAAACCAAATTACAACAAAA+TGG | + | chr1_3:67784471-67784490 | None:intergenic | 20.0% |
| !! | CTTTATGAGAAACAAAAAAT+GGG | + | chr1_3:67784503-67784522 | None:intergenic | 20.0% |
| !! | ACTTTATGAGAAACAAAAAA+TGG | + | chr1_3:67784504-67784523 | None:intergenic | 20.0% |
| !!! | AACTTTTTCTTCATTTTGTT+TGG | - | chr1_3:67784687-67784706 | Msa0136000:CDS | 20.0% |
| !!! | ATTTAACAAACATACTCTTT+TGG | - | chr1_3:67785455-67785474 | Msa0136000:intron | 20.0% |
| !! | ATTAAAGTAAGAGATTTGAA+TGG | - | chr1_3:67785785-67785804 | Msa0136000:intron | 20.0% |
| !! | AATATCAAAGTATAACCAAA+TGG | + | chr1_3:67786715-67786734 | None:intergenic | 20.0% |
| !! | AGTAAAAAACAAATTATCCA+AGG | + | chr1_3:67787091-67787110 | None:intergenic | 20.0% |
| !! | GTTTATAAATCAGGTAAATT+TGG | - | chr1_3:67787499-67787518 | Msa0136000:CDS | 20.0% |
| !!! | TAATTTTATCATCCTTATGT+TGG | - | chr1_3:67787633-67787652 | Msa0136000:intron | 20.0% |
| !!! | GAAATCACTTATTTGTTTTT+TGG | + | chr1_3:67787692-67787711 | None:intergenic | 20.0% |
| !!! | GAAAGAATTTGACATTTTAA+AGG | + | chr1_3:67787777-67787796 | None:intergenic | 20.0% |
| !! | AATCAAAATAAGAATCAAAG+TGG | + | chr1_3:67788043-67788062 | None:intergenic | 20.0% |
| !!! | TATAGATTATCTGTTGTTTA+AGG | - | chr1_3:67788462-67788481 | Msa0136000:CDS | 20.0% |
| !!! | TAACCCATTTTGTTGTAATT+TGG | - | chr1_3:67784464-67784483 | Msa0136000:three_prime_UTR | 25.0% |
| !!! | TCTCATAAAGTTTTAAGCTT+TGG | - | chr1_3:67784513-67784532 | Msa0136000:three_prime_UTR | 25.0% |
| ! | TCTTTACATAGATTGTTTAC+TGG | - | chr1_3:67784983-67785002 | Msa0136000:CDS | 25.0% |
| !! | ATGAATAGTTTTCATTAGCT+TGG | - | chr1_3:67785008-67785027 | Msa0136000:intron | 25.0% |
| !! | ATAGTGTCTTTTAATGCATT+TGG | - | chr1_3:67785197-67785216 | Msa0136000:intron | 25.0% |
| ! | GATGTATTTATTCATATTGC+AGG | - | chr1_3:67785282-67785301 | Msa0136000:CDS | 25.0% |
| ! | GTAAATAAAGTAACATACCT+GGG | + | chr1_3:67785555-67785574 | None:intergenic | 25.0% |
| ! | TGCTACACAAATATTTCAAA+AGG | + | chr1_3:67785610-67785629 | None:intergenic | 25.0% |
| ! | ATATCACTGAGTAAATTACA+AGG | + | chr1_3:67785694-67785713 | None:intergenic | 25.0% |
| !! | TAAATATAGACTAACTTGTG+TGG | - | chr1_3:67786479-67786498 | Msa0136000:intron | 25.0% |
| !! | AAATATAGACTAACTTGTGT+GGG | - | chr1_3:67786480-67786499 | Msa0136000:intron | 25.0% |
| ! | TATATCCGAATATTGTAATC+TGG | - | chr1_3:67786650-67786669 | Msa0136000:intron | 25.0% |
| ! | AATAGCCAGATTACAATATT+CGG | + | chr1_3:67786658-67786677 | None:intergenic | 25.0% |
| !! | TGTTGAAGTTTGATGATTTA+GGG | - | chr1_3:67786926-67786945 | Msa0136000:intron | 25.0% |
| !! | ATGCTTTTCTTCTCTATATT+TGG | - | chr1_3:67787224-67787243 | Msa0136000:intron | 25.0% |
| !! | AAACAATTTGTTCATTCCTA+TGG | - | chr1_3:67787335-67787354 | Msa0136000:intron | 25.0% |
| ! | ATTTACCTGATTTATAAACC+CGG | + | chr1_3:67787498-67787517 | None:intergenic | 25.0% |
| !! | TCTAAGATATATATTTACCG+AGG | + | chr1_3:67787991-67788010 | None:intergenic | 25.0% |
| ! | AATTATAGTTGCTTACTTCT+TGG | - | chr1_3:67788126-67788145 | Msa0136000:intron | 25.0% |
| ! | AAAAATCTGTTCAGATTCAT+AGG | + | chr1_3:67788265-67788284 | None:intergenic | 25.0% |
| ! | TGAAATAAATGAGTGCATTT+AGG | + | chr1_3:67788296-67788315 | None:intergenic | 25.0% |
| ! | ATACTAGAAACTATGAGATT+GGG | + | chr1_3:67788355-67788374 | None:intergenic | 25.0% |
| ! | TATACTAGAAACTATGAGAT+TGG | + | chr1_3:67788356-67788375 | None:intergenic | 25.0% |
| ! | TCTAGTATATCTACACAAAT+AGG | - | chr1_3:67788367-67788386 | Msa0136000:intron | 25.0% |
| CAACATTACATTGTTATGCT+TGG | - | chr1_3:67784590-67784609 | Msa0136000:CDS | 30.0% | |
| ! | AATAGTGGAAACAATGACAA+TGG | + | chr1_3:67784618-67784637 | None:intergenic | 30.0% |
| ACTATTCTTGTTCCTTTGAT+GGG | - | chr1_3:67784632-67784651 | Msa0136000:CDS | 30.0% | |
| !! | GTGTTAATTTGTTGTGTTCT+TGG | - | chr1_3:67785037-67785056 | Msa0136000:intron | 30.0% |
| !! | TTCTTGGTTTCATTTTTCAG+AGG | - | chr1_3:67785053-67785072 | Msa0136000:intron | 30.0% |
| !!! | CAAGGAATGATTGGATTTTT+TGG | - | chr1_3:67785130-67785149 | Msa0136000:intron | 30.0% |
| !!! | TGATTGGATTTTTTGGATTC+TGG | - | chr1_3:67785137-67785156 | Msa0136000:intron | 30.0% |
| !!! | GATTGGATTTTTTGGATTCT+GGG | - | chr1_3:67785138-67785157 | Msa0136000:intron | 30.0% |
| !!! | ATTGGATTTTTTGGATTCTG+GGG | - | chr1_3:67785139-67785158 | Msa0136000:intron | 30.0% |
| !!! | GATGAAATCAGTTCTAGTTT+TGG | - | chr1_3:67785227-67785246 | Msa0136000:intron | 30.0% |
| GGTAAATAAAGTAACATACC+TGG | + | chr1_3:67785556-67785575 | None:intergenic | 30.0% | |
| AAGATGTTGAATGAGATAGA+GGG | + | chr1_3:67785578-67785597 | None:intergenic | 30.0% | |
| AAAGATGTTGAATGAGATAG+AGG | + | chr1_3:67785579-67785598 | None:intergenic | 30.0% | |
| GTAAATTACAAGGTAAGAGT+TGG | + | chr1_3:67785684-67785703 | None:intergenic | 30.0% | |
| AAAGTAAGAGATTTGAATGG+TGG | - | chr1_3:67785788-67785807 | Msa0136000:intron | 30.0% | |
| !! | TTGATGTTCTTTCCACTTTT+TGG | - | chr1_3:67785875-67785894 | Msa0136000:intron | 30.0% |
| !! | ACATTGGTTTAACCAAAAAG+TGG | + | chr1_3:67785890-67785909 | None:intergenic | 30.0% |
| ! | CCTCTTGATTTAATCTTTTG+TGG | + | chr1_3:67785927-67785946 | None:intergenic | 30.0% |
| CCACAAAAGATTAAATCAAG+AGG | - | chr1_3:67785924-67785943 | Msa0136000:intron | 30.0% | |
| !!! | ATTTGCTGAAATTTTGACTG+CGG | - | chr1_3:67785992-67786011 | Msa0136000:CDS | 30.0% |
| GACGTAATAGATGATATCTT+AGG | - | chr1_3:67786176-67786195 | Msa0136000:intron | 30.0% | |
| GTAGAGAAAGCTAATTCAAA+TGG | + | chr1_3:67786304-67786323 | None:intergenic | 30.0% | |
| TATCACCAACATTGAAAGTA+GGG | + | chr1_3:67786391-67786410 | None:intergenic | 30.0% | |
| ATATCACCAACATTGAAAGT+AGG | + | chr1_3:67786392-67786411 | None:intergenic | 30.0% | |
| ! | AATATAGACTAACTTGTGTG+GGG | - | chr1_3:67786481-67786500 | Msa0136000:intron | 30.0% |
| CTGTTACAAGAGATTGAAAA+GGG | + | chr1_3:67786748-67786767 | None:intergenic | 30.0% | |
| ACTGTTACAAGAGATTGAAA+AGG | + | chr1_3:67786749-67786768 | None:intergenic | 30.0% | |
| ! | GTGTTGAAGTTTGATGATTT+AGG | - | chr1_3:67786925-67786944 | Msa0136000:intron | 30.0% |
| ! | AGTTTGATGATTTAGGGTAT+AGG | - | chr1_3:67786932-67786951 | Msa0136000:intron | 30.0% |
| CCTAAGAACTATTTGACAAT+AGG | + | chr1_3:67787036-67787055 | None:intergenic | 30.0% | |
| CCTATTGTCAAATAGTTCTT+AGG | - | chr1_3:67787033-67787052 | Msa0136000:intron | 30.0% | |
| TAGTTCTTAGGCTATATTCT+TGG | - | chr1_3:67787045-67787064 | Msa0136000:intron | 30.0% | |
| TTATTAAGTGTCTTTGACCT+TGG | - | chr1_3:67787071-67787090 | Msa0136000:intron | 30.0% | |
| ! | TTTCCTTTTAGTCAAAATGC+AGG | - | chr1_3:67787143-67787162 | Msa0136000:intron | 30.0% |
| !!! | AATCCTGCATTTTGACTAAA+AGG | + | chr1_3:67787149-67787168 | None:intergenic | 30.0% |
| ATACTCAGAAATTCACAGAA+GGG | + | chr1_3:67787264-67787283 | None:intergenic | 30.0% | |
| AATACTCAGAAATTCACAGA+AGG | + | chr1_3:67787265-67787284 | None:intergenic | 30.0% | |
| TAAATGTGAGAACAATGTTG+TGG | + | chr1_3:67787412-67787431 | None:intergenic | 30.0% | |
| AGATATTCGAGGAAATATTG+TGG | + | chr1_3:67787930-67787949 | None:intergenic | 30.0% | |
| AAGATATATATTTACCGAGG+TGG | + | chr1_3:67787988-67788007 | None:intergenic | 30.0% | |
| CAGATTATTGCAATAGTTGT+AGG | - | chr1_3:67788406-67788425 | Msa0136000:CDS | 30.0% | |
| ! | TTACTGTTGATTGCTGTGTT+AGG | - | chr1_3:67784420-67784439 | Msa0136000:three_prime_UTR | 35.0% |
| TTTATTGCATTTGCAGCTGA+AGG | - | chr1_3:67784551-67784570 | Msa0136000:CDS | 35.0% | |
| TTATTGCATTTGCAGCTGAA+GGG | - | chr1_3:67784552-67784571 | Msa0136000:CDS | 35.0% | |
| CATCAAAGGAACAAGAATAG+TGG | + | chr1_3:67784633-67784652 | None:intergenic | 35.0% | |
| CACTATTCTTGTTCCTTTGA+TGG | - | chr1_3:67784631-67784650 | Msa0136000:CDS | 35.0% | |
| !!! | ATGTTTTGAGGGAAAACTGT+AGG | - | chr1_3:67784737-67784756 | Msa0136000:intron | 35.0% |
| !! | TCTTATTCCAGCTATTTCTG+TGG | - | chr1_3:67784872-67784891 | Msa0136000:CDS | 35.0% |
| AATGTACAACTACAACAGCA+TGG | + | chr1_3:67784958-67784977 | None:intergenic | 35.0% | |
| AATCCATGAGAGCTATTCAA+GGG | - | chr1_3:67785083-67785102 | Msa0136000:intron | 35.0% | |
| CTTATTGCTTCCTTTGTTCA+AGG | - | chr1_3:67785112-67785131 | Msa0136000:intron | 35.0% | |
| TCCTTTGTTCAAGGAATGAT+TGG | - | chr1_3:67785121-67785140 | Msa0136000:intron | 35.0% | |
| TCCAATCATTCCTTGAACAA+AGG | + | chr1_3:67785125-67785144 | None:intergenic | 35.0% | |
| !! | TTTGGATTCTGGGGAATTTT+TGG | - | chr1_3:67785148-67785167 | Msa0136000:intron | 35.0% |
| TTTACTGTGATTCCTGTAGT+TGG | - | chr1_3:67785478-67785497 | Msa0136000:intron | 35.0% | |
| AGATGTTGAATGAGATAGAG+GGG | + | chr1_3:67785577-67785596 | None:intergenic | 35.0% | |
| AGTTCCGTATCCATTTCAAT+GGG | - | chr1_3:67786361-67786380 | Msa0136000:intron | 35.0% | |
| TTCTCTTGTTGCAATTGTAG+AGG | - | chr1_3:67786430-67786449 | Msa0136000:CDS | 35.0% | |
| !!! | GGATCGGTGTTATACATTTT+CGG | - | chr1_3:67786502-67786521 | Msa0136000:intron | 35.0% |
| CCACAATGTCATATTGATCA+TGG | + | chr1_3:67786572-67786591 | None:intergenic | 35.0% | |
| CCATGATCAATATGACATTG+TGG | - | chr1_3:67786569-67786588 | Msa0136000:intron | 35.0% | |
| !! | TCTGGCTATTTCTAAGTAGA+AGG | - | chr1_3:67786668-67786687 | Msa0136000:intron | 35.0% |
| AATCTCTTGTAACAGTCAAC+TGG | - | chr1_3:67786753-67786772 | Msa0136000:CDS | 35.0% | |
| ATCTCTTGTAACAGTCAACT+GGG | - | chr1_3:67786754-67786773 | Msa0136000:CDS | 35.0% | |
| CAACAAAATGTACACTGATG+CGG | + | chr1_3:67786999-67787018 | None:intergenic | 35.0% | |
| TAGTCAAAATGCAGGATTGT+TGG | - | chr1_3:67787151-67787170 | Msa0136000:intron | 35.0% | |
| AGTCAAAATGCAGGATTGTT+GGG | - | chr1_3:67787152-67787171 | Msa0136000:intron | 35.0% | |
| AGAGTCATTCAAATATCAGC+TGG | - | chr1_3:67787197-67787216 | Msa0136000:intron | 35.0% | |
| GCCTAATTACTTACTGTATC+CGG | - | chr1_3:67787476-67787495 | Msa0136000:CDS | 35.0% | |
| CCTAATTACTTACTGTATCC+GGG | - | chr1_3:67787477-67787496 | Msa0136000:CDS | 35.0% | |
| TGTATCCGGGTTTATAAATC+AGG | - | chr1_3:67787490-67787509 | Msa0136000:CDS | 35.0% | |
| TGCAAAGAGAACACAATACA+CGG | + | chr1_3:67787563-67787582 | None:intergenic | 35.0% | |
| TGTGTTCTCTTTGCATATGT+CGG | - | chr1_3:67787568-67787587 | Msa0136000:intron | 35.0% | |
| TACAGATCAATGTTCATCGT+TGG | - | chr1_3:67787876-67787895 | Msa0136000:intron | 35.0% | |
| GTGGTTATACTTATAGCAAG+AGG | + | chr1_3:67788024-67788043 | None:intergenic | 35.0% | |
| AAAATTCAGGACCTTCAATC+AGG | - | chr1_3:67788210-67788229 | Msa0136000:CDS | 35.0% | |
| ACTTCTGATATCCTGATTGA+AGG | + | chr1_3:67788224-67788243 | None:intergenic | 35.0% | |
| ATCAGAAGTGATGAGTTCTA+TGG | - | chr1_3:67788235-67788254 | Msa0136000:CDS | 35.0% | |
| ! | TTTTCAACCTCATCCTGTCA+AGG | - | chr1_3:67784391-67784410 | Msa0136000:three_prime_UTR | 40.0% |
| ACAGTAAGTTGTTCCTTGAC+AGG | + | chr1_3:67784407-67784426 | None:intergenic | 40.0% | |
| ! | CAGCTGAAGGGATTTTTCTT+GGG | - | chr1_3:67784564-67784583 | Msa0136000:CDS | 40.0% |
| ATTCTTGTTCCTTTGATGGG+TGG | - | chr1_3:67784635-67784654 | Msa0136000:CDS | 40.0% | |
| !! | TTTTGAGGGAAAACTGTAGG+TGG | - | chr1_3:67784740-67784759 | Msa0136000:intron | 40.0% |
| AAAGATGCTCCTATAACCAC+TGG | + | chr1_3:67784846-67784865 | None:intergenic | 40.0% | |
| TGTATTCCTTAATCCTCGTC+AGG | - | chr1_3:67784914-67784933 | Msa0136000:CDS | 40.0% | |
| CAATCCATGAGAGCTATTCA+AGG | - | chr1_3:67785082-67785101 | Msa0136000:intron | 40.0% | |
| ATCCATGAGAGCTATTCAAG+GGG | - | chr1_3:67785084-67785103 | Msa0136000:intron | 40.0% | |
| !! | GATTCTGGGGAATTTTTGGA+AGG | - | chr1_3:67785152-67785171 | Msa0136000:intron | 40.0% |
| TAGGCCAGTTAGAGTTACAA+GGG | + | chr1_3:67785333-67785352 | None:intergenic | 40.0% | |
| TCTTTGTGATAGGGTTTCCA+AGG | - | chr1_3:67785357-67785376 | Msa0136000:intron | 40.0% | |
| CTTTGTGATAGGGTTTCCAA+GGG | - | chr1_3:67785358-67785377 | Msa0136000:intron | 40.0% | |
| GAGAGAAATGTGTTTACCCT+TGG | + | chr1_3:67785377-67785396 | None:intergenic | 40.0% | |
| TTGGCAGATTGTGTTGAGAT+TGG | - | chr1_3:67785497-67785516 | Msa0136000:intron | 40.0% | |
| !! | TCTTCCTGCATTGGTTATTC+TGG | - | chr1_3:67785520-67785539 | Msa0136000:intron | 40.0% |
| ATGACCAGAATAACCAATGC+AGG | + | chr1_3:67785527-67785546 | None:intergenic | 40.0% | |
| TAAAGTAACATACCTGGGAG+AGG | + | chr1_3:67785550-67785569 | None:intergenic | 40.0% | |
| TCGTGACTATGACTGCAAAT+CGG | + | chr1_3:67785956-67785975 | None:intergenic | 40.0% | |
| TTTGCAGTCATAGTCACGAT+TGG | - | chr1_3:67785957-67785976 | Msa0136000:intron | 40.0% | |
| TAGTCACGATTGGAATTGCA+TGG | - | chr1_3:67785967-67785986 | Msa0136000:intron | 40.0% | |
| AGTCACGATTGGAATTGCAT+GGG | - | chr1_3:67785968-67785987 | Msa0136000:intron | 40.0% | |
| CAACTGAATTGAGTACTCAG+TGG | + | chr1_3:67786038-67786057 | None:intergenic | 40.0% | |
| AGCTTTCTGTACATCTATGC+AGG | - | chr1_3:67786333-67786352 | Msa0136000:intron | 40.0% | |
| GAGTTCCGTATCCATTTCAA+TGG | - | chr1_3:67786360-67786379 | Msa0136000:intron | 40.0% | |
| GTTCCGTATCCATTTCAATG+GGG | - | chr1_3:67786362-67786381 | Msa0136000:intron | 40.0% | |
| TTCCGTATCCATTTCAATGG+GGG | - | chr1_3:67786363-67786382 | Msa0136000:intron | 40.0% | |
| TTCATCGCTGCATCAAGATT+TGG | - | chr1_3:67786780-67786799 | Msa0136000:CDS | 40.0% | |
| GACAATAGGTAGTGAGAAGA+GGG | + | chr1_3:67787022-67787041 | None:intergenic | 40.0% | |
| TGACAATAGGTAGTGAGAAG+AGG | + | chr1_3:67787023-67787042 | None:intergenic | 40.0% | |
| AGATATTCCAACGAAGCCAT+AGG | + | chr1_3:67787354-67787373 | None:intergenic | 40.0% | |
| CCCGGATACAGTAAGTAATT+AGG | + | chr1_3:67787480-67787499 | None:intergenic | 40.0% | |
| CAATACACGGCTGCTATTAT+TGG | + | chr1_3:67787550-67787569 | None:intergenic | 40.0% | |
| !!! | GTTGGCTTTTCTCTCTTCAT+AGG | - | chr1_3:67787894-67787913 | Msa0136000:intron | 40.0% |
| CAGATAGTGTGAGATATTCG+AGG | + | chr1_3:67787941-67787960 | None:intergenic | 40.0% | |
| CTCGAATATCTCACACTATC+TGG | - | chr1_3:67787939-67787958 | Msa0136000:CDS | 40.0% | |
| TATCTCACACTATCTGGACA+TGG | - | chr1_3:67787945-67787964 | Msa0136000:CDS | 40.0% | |
| ATGAGTGCATTTAGGCTGAA+GGG | + | chr1_3:67788288-67788307 | None:intergenic | 40.0% | |
| AATGAGTGCATTTAGGCTGA+AGG | + | chr1_3:67788289-67788308 | None:intergenic | 40.0% | |
| AGTTGTTCCTTGACAGGATG+AGG | + | chr1_3:67784401-67784420 | None:intergenic | 45.0% | |
| ! | ATGGGTTACTTACGCCATGA+AGG | + | chr1_3:67784452-67784471 | None:intergenic | 45.0% |
| ! | GCAGCTGAAGGGATTTTTCT+TGG | - | chr1_3:67784563-67784582 | Msa0136000:CDS | 45.0% |
| !!! | CAGACACTGCTTTTTGTTGC+TGG | - | chr1_3:67784780-67784799 | Msa0136000:intron | 45.0% |
| TCAACACTCTGTTGCAGACA+TGG | - | chr1_3:67784805-67784824 | Msa0136000:intron | 45.0% | |
| ACTAGGCTTCCAGTGGTTAT+AGG | - | chr1_3:67784834-67784853 | Msa0136000:intron | 45.0% | |
| GAGAATGCCACAGAAATAGC+TGG | + | chr1_3:67784882-67784901 | None:intergenic | 45.0% | |
| GTTCCCCTTGTAACTCTAAC+TGG | - | chr1_3:67785326-67785345 | Msa0136000:intron | 45.0% | |
| AGGCCAGTTAGAGTTACAAG+GGG | + | chr1_3:67785332-67785351 | None:intergenic | 45.0% | |
| CTAGGCCAGTTAGAGTTACA+AGG | + | chr1_3:67785334-67785353 | None:intergenic | 45.0% | |
| ! | CTTGTAACTCTAACTGGCCT+AGG | - | chr1_3:67785332-67785351 | Msa0136000:intron | 45.0% |
| GCCTAGGACTCTTTGTGATA+GGG | - | chr1_3:67785348-67785367 | Msa0136000:intron | 45.0% | |
| ACCCTATCACAAAGAGTCCT+AGG | + | chr1_3:67785352-67785371 | None:intergenic | 45.0% | |
| CAACACAATCTGCCAACTAC+AGG | + | chr1_3:67785493-67785512 | None:intergenic | 45.0% | |
| !! | TGAGATTGGTCTTCCTGCAT+TGG | - | chr1_3:67785511-67785530 | Msa0136000:intron | 45.0% |
| GGAATGTACTGCAACGACAT+TGG | + | chr1_3:67785906-67785925 | None:intergenic | 45.0% | |
| GTCACGATTGGAATTGCATG+GGG | - | chr1_3:67785969-67785988 | Msa0136000:intron | 45.0% | |
| TTAACCCAGATCGGTCAGTA+CGG | + | chr1_3:67786061-67786080 | None:intergenic | 45.0% | |
| CGGCAGTAATTAACCCAGAT+CGG | + | chr1_3:67786070-67786089 | None:intergenic | 45.0% | |
| ! | AGGCTCCAAAGCATCAAACT+AGG | - | chr1_3:67786196-67786215 | Msa0136000:intron | 45.0% |
| CTCTGCCTAGTTTGATGCTT+TGG | + | chr1_3:67786204-67786223 | None:intergenic | 45.0% | |
| TTGCACCTCTGACTTCTTTG+TGG | - | chr1_3:67786271-67786290 | Msa0136000:intron | 45.0% | |
| ACATGCCACAAAGAAGTCAG+AGG | + | chr1_3:67786279-67786298 | None:intergenic | 45.0% | |
| CTCCCCCATTGAAATGGATA+CGG | + | chr1_3:67786368-67786387 | None:intergenic | 45.0% | |
| ! | AGACTAACTTGTGTGGGGAT+CGG | - | chr1_3:67786486-67786505 | Msa0136000:intron | 45.0% |
| ATCGCTGCATCAAGATTTGG+CGG | - | chr1_3:67786783-67786802 | Msa0136000:CDS | 45.0% | |
| TTAGGGTATAGGCACTCTTC+TGG | - | chr1_3:67786943-67786962 | Msa0136000:intron | 45.0% | |
| ! | ACTCTTCTGGATGCCTTGTT+TGG | - | chr1_3:67786956-67786975 | Msa0136000:intron | 45.0% |
| CAAAATGTACACTGATGCGG+TGG | + | chr1_3:67786996-67787015 | None:intergenic | 45.0% | |
| GTTCATTCCTATGGCTTCGT+TGG | - | chr1_3:67787344-67787363 | Msa0136000:intron | 45.0% | |
| ACGGCTGCTATTATTGGCAA+TGG | + | chr1_3:67787544-67787563 | None:intergenic | 45.0% | |
| AGTTCTCGCAGACCAACATA+AGG | + | chr1_3:67787648-67787667 | None:intergenic | 45.0% | |
| GACACTGGTGGGAAAAATTC+AGG | - | chr1_3:67788197-67788216 | Msa0136000:CDS | 45.0% | |
| !!! | TCATTTTTTATATATTTTTA+TGG | - | chr1_3:67785395-67785414 | Msa0136000:intron | 5.0% |
| GTGTTAGGAGCTCACCTTCA+TGG | - | chr1_3:67784435-67784454 | Msa0136000:three_prime_UTR | 50.0% | |
| ! | CTTGTTCCTTTGATGGGTGG+TGG | - | chr1_3:67784638-67784657 | Msa0136000:CDS | 50.0% |
| ACATTGCCACCACCCATCAA+AGG | + | chr1_3:67784647-67784666 | None:intergenic | 50.0% | |
| ACTCTGTTGCAGACATGGCT+TGG | - | chr1_3:67784810-67784829 | Msa0136000:intron | 50.0% | |
| ! | TGCAGACATGGCTTGGAACT+AGG | - | chr1_3:67784817-67784836 | Msa0136000:intron | 50.0% |
| GACAGACCTGACGAGGATTA+AGG | + | chr1_3:67784923-67784942 | None:intergenic | 50.0% | |
| TGCCCCTTGAATAGCTCTCA+TGG | + | chr1_3:67785089-67785108 | None:intergenic | 50.0% | |
| GGCCTAGGACTCTTTGTGAT+AGG | - | chr1_3:67785347-67785366 | Msa0136000:intron | 50.0% | |
| TATTCTGGTCATCCTCTCCC+AGG | - | chr1_3:67785535-67785554 | Msa0136000:intron | 50.0% | |
| !!! | GCTGAAATTTTGACTGCGGC+TGG | - | chr1_3:67785996-67786015 | Msa0136000:CDS | 50.0% |
| GGTTAATTACTGCCGCTCCA+TGG | - | chr1_3:67786075-67786094 | Msa0136000:intron | 50.0% | |
| TACCAAGACTGACCATGGAG+CGG | + | chr1_3:67786090-67786109 | None:intergenic | 50.0% | |
| CAAGCTACCAAGACTGACCA+TGG | + | chr1_3:67786095-67786114 | None:intergenic | 50.0% | |
| ! | CATGGTCAGTCTTGGTAGCT+TGG | - | chr1_3:67786093-67786112 | Msa0136000:intron | 50.0% |
| GGGAGCCCTACTTTCAATGT+TGG | - | chr1_3:67786383-67786402 | Msa0136000:CDS | 50.0% | |
| TCCAGTTGCTGCACCAAACA+AGG | + | chr1_3:67786972-67786991 | None:intergenic | 50.0% | |
| TTGTTGGGTCTAACACGCGT+TGG | - | chr1_3:67787167-67787186 | Msa0136000:intron | 50.0% | |
| TGTTGGGTCTAACACGCGTT+GGG | - | chr1_3:67787168-67787187 | Msa0136000:intron | 50.0% | |
| AGGTGGATCCAGTATGAGCA+GGG | + | chr1_3:67787971-67787990 | None:intergenic | 50.0% | |
| TGCTCATACTGGATCCACCT+CGG | - | chr1_3:67787971-67787990 | Msa0136000:CDS | 50.0% | |
| ATGGCAGCTGGTGAAAGTGG+TGG | - | chr1_3:67784344-67784363 | Msa0136000:three_prime_UTR | 55.0% | |
| GCTTGGAACTAGGCTTCCAG+TGG | - | chr1_3:67784827-67784846 | Msa0136000:intron | 55.0% | |
| CTACACAGACAGACCTGACG+AGG | + | chr1_3:67784930-67784949 | None:intergenic | 55.0% | |
| ! | CAAGGGGAACAGCACTGAGA+GGG | + | chr1_3:67785316-67785335 | None:intergenic | 55.0% |
| ! | ACAAGGGGAACAGCACTGAG+AGG | + | chr1_3:67785317-67785336 | None:intergenic | 55.0% |
| ! | AGTTGCCGTACTGACCGATC+TGG | - | chr1_3:67786053-67786072 | Msa0136000:intron | 55.0% |
| ! | GTTGCCGTACTGACCGATCT+GGG | - | chr1_3:67786054-67786073 | Msa0136000:intron | 55.0% |
| GTAGGGCTCCCCCATTGAAA+TGG | + | chr1_3:67786374-67786393 | None:intergenic | 55.0% | |
| CCACCTTCTGTACTTAGCCG+CGG | - | chr1_3:67786819-67786838 | Msa0136000:CDS | 55.0% | |
| ACACCGCGGCTAAGTACAGA+AGG | + | chr1_3:67786825-67786844 | None:intergenic | 55.0% | |
| TCTGTACTTAGCCGCGGTGT+TGG | - | chr1_3:67786825-67786844 | Msa0136000:CDS | 55.0% | |
| !! | GCCTTGTTTGGTGCAGCAAC+TGG | - | chr1_3:67786968-67786987 | Msa0136000:intron | 55.0% |
| CTGTGATGAGCAGCTTCAGC+TGG | - | chr1_3:67787819-67787838 | Msa0136000:intron | 55.0% | |
| TGAGCAGCTTCAGCTGGACT+TGG | - | chr1_3:67787825-67787844 | Msa0136000:intron | 55.0% | |
| GAGGTGGATCCAGTATGAGC+AGG | + | chr1_3:67787972-67787991 | None:intergenic | 55.0% | |
| GGCGTGTTCACGACTCATAG+TGG | + | chr1_3:67788155-67788174 | None:intergenic | 55.0% | |
| CCTCAACTCACCGTGACAGT+GGG | - | chr1_3:67788173-67788192 | Msa0136000:CDS | 55.0% | |
| ACCAGTGTCTCCCACTGTCA+CGG | + | chr1_3:67788186-67788205 | None:intergenic | 55.0% | |
| TGACAGTGGGAGACACTGGT+GGG | - | chr1_3:67788186-67788205 | Msa0136000:CDS | 55.0% | |
| GCAGCTGGTGAAAGTGGTGG+TGG | - | chr1_3:67784347-67784366 | Msa0136000:three_prime_UTR | 60.0% | |
| !! | GCTGGTGAAAGTGGTGGTGG+TGG | - | chr1_3:67784350-67784369 | Msa0136000:three_prime_UTR | 60.0% |
| !! | GGTGAAAGTGGTGGTGGTGG+TGG | - | chr1_3:67784353-67784372 | Msa0136000:three_prime_UTR | 60.0% |
| !! | GAAAGTGGTGGTGGTGGTGG+TGG | - | chr1_3:67784356-67784375 | Msa0136000:three_prime_UTR | 60.0% |
| TGCCGCTCCATGGTCAGTCT+TGG | - | chr1_3:67786085-67786104 | Msa0136000:intron | 60.0% | |
| CCGCGGCTAAGTACAGAAGG+TGG | + | chr1_3:67786822-67786841 | None:intergenic | 60.0% | |
| !! | TACTTAGCCGCGGTGTTGGC+TGG | - | chr1_3:67786829-67786848 | Msa0136000:CDS | 60.0% |
| GGACATGGCCCTGCTCATAC+TGG | - | chr1_3:67787960-67787979 | Msa0136000:CDS | 60.0% | |
| GCCTCAACTCACCGTGACAG+TGG | - | chr1_3:67788172-67788191 | Msa0136000:CDS | 60.0% | |
| CCCACTGTCACGGTGAGTTG+AGG | + | chr1_3:67788176-67788195 | None:intergenic | 60.0% | |
| ACCGTGACAGTGGGAGACAC+TGG | - | chr1_3:67788182-67788201 | Msa0136000:CDS | 60.0% | |
| GTGACAGTGGGAGACACTGG+TGG | - | chr1_3:67788185-67788204 | Msa0136000:CDS | 60.0% | |
| GTACCAGCCAGCCAACACCG+CGG | + | chr1_3:67786839-67786858 | None:intergenic | 65.0% | |
| !! | TAGCCGCGGTGTTGGCTGGC+TGG | - | chr1_3:67786833-67786852 | Msa0136000:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 67784344 | 67788490 | 67784344 | ID=Msa0136000;Name=Msa0136000 |
| chr1_3 | mRNA | 67784344 | 67788490 | 67784344 | ID=Msa0136000-mRNA-1;Parent=Msa0136000;Name=Msa0136000-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0.84|0.71|1|1|1|14|193|535 |
| chr1_3 | exon | 67784344 | 67784755 | 67784344 | ID=Msa0136000-mRNA-1:exon:23309;Parent=Msa0136000-mRNA-1 |
| chr1_3 | exon | 67784842 | 67785002 | 67784842 | ID=Msa0136000-mRNA-1:exon:23308;Parent=Msa0136000-mRNA-1 |
| chr1_3 | exon | 67785245 | 67785322 | 67785245 | ID=Msa0136000-mRNA-1:exon:23307;Parent=Msa0136000-mRNA-1 |
| chr1_3 | exon | 67785589 | 67785680 | 67785589 | ID=Msa0136000-mRNA-1:exon:23306;Parent=Msa0136000-mRNA-1 |
| chr1_3 | exon | 67785820 | 67785887 | 67785820 | ID=Msa0136000-mRNA-1:exon:23305;Parent=Msa0136000-mRNA-1 |
| chr1_3 | exon | 67785980 | 67786066 | 67785980 | ID=Msa0136000-mRNA-1:exon:23304;Parent=Msa0136000-mRNA-1 |
| chr1_3 | exon | 67786383 | 67786479 | 67786383 | ID=Msa0136000-mRNA-1:exon:23303;Parent=Msa0136000-mRNA-1 |
| chr1_3 | exon | 67786738 | 67786916 | 67786738 | ID=Msa0136000-mRNA-1:exon:23302;Parent=Msa0136000-mRNA-1 |
| chr1_3 | exon | 67787278 | 67787337 | 67787278 | ID=Msa0136000-mRNA-1:exon:23301;Parent=Msa0136000-mRNA-1 |
| chr1_3 | exon | 67787455 | 67787530 | 67787455 | ID=Msa0136000-mRNA-1:exon:23300;Parent=Msa0136000-mRNA-1 |
| chr1_3 | exon | 67787661 | 67787761 | 67787661 | ID=Msa0136000-mRNA-1:exon:23299;Parent=Msa0136000-mRNA-1 |
| chr1_3 | exon | 67787899 | 67788075 | 67787899 | ID=Msa0136000-mRNA-1:exon:23298;Parent=Msa0136000-mRNA-1 |
| chr1_3 | exon | 67788170 | 67788267 | 67788170 | ID=Msa0136000-mRNA-1:exon:23297;Parent=Msa0136000-mRNA-1 |
| chr1_3 | exon | 67788376 | 67788490 | 67788376 | ID=Msa0136000-mRNA-1:exon:23296;Parent=Msa0136000-mRNA-1 |
| chr1_3 | CDS | 67788376 | 67788490 | 67788376 | ID=Msa0136000-mRNA-1:cds;Parent=Msa0136000-mRNA-1 |
| chr1_3 | CDS | 67788170 | 67788267 | 67788170 | ID=Msa0136000-mRNA-1:cds;Parent=Msa0136000-mRNA-1 |
| chr1_3 | CDS | 67787899 | 67788075 | 67787899 | ID=Msa0136000-mRNA-1:cds;Parent=Msa0136000-mRNA-1 |
| chr1_3 | CDS | 67787661 | 67787761 | 67787661 | ID=Msa0136000-mRNA-1:cds;Parent=Msa0136000-mRNA-1 |
| chr1_3 | CDS | 67787455 | 67787530 | 67787455 | ID=Msa0136000-mRNA-1:cds;Parent=Msa0136000-mRNA-1 |
| chr1_3 | CDS | 67787278 | 67787337 | 67787278 | ID=Msa0136000-mRNA-1:cds;Parent=Msa0136000-mRNA-1 |
| chr1_3 | CDS | 67786738 | 67786916 | 67786738 | ID=Msa0136000-mRNA-1:cds;Parent=Msa0136000-mRNA-1 |
| chr1_3 | CDS | 67786383 | 67786479 | 67786383 | ID=Msa0136000-mRNA-1:cds;Parent=Msa0136000-mRNA-1 |
| chr1_3 | CDS | 67785980 | 67786066 | 67785980 | ID=Msa0136000-mRNA-1:cds;Parent=Msa0136000-mRNA-1 |
| chr1_3 | CDS | 67785820 | 67785887 | 67785820 | ID=Msa0136000-mRNA-1:cds;Parent=Msa0136000-mRNA-1 |
| chr1_3 | CDS | 67785589 | 67785680 | 67785589 | ID=Msa0136000-mRNA-1:cds;Parent=Msa0136000-mRNA-1 |
| chr1_3 | CDS | 67785245 | 67785322 | 67785245 | ID=Msa0136000-mRNA-1:cds;Parent=Msa0136000-mRNA-1 |
| chr1_3 | CDS | 67784842 | 67785002 | 67784842 | ID=Msa0136000-mRNA-1:cds;Parent=Msa0136000-mRNA-1 |
| chr1_3 | CDS | 67784537 | 67784755 | 67784537 | ID=Msa0136000-mRNA-1:cds;Parent=Msa0136000-mRNA-1 |
| chr1_3 | three_prime_UTR | 67784344 | 67784536 | 67784344 | ID=Msa0136000-mRNA-1:three_prime_utr;Parent=Msa0136000-mRNA-1 |
| Gene Sequence |
| Protein sequence |
