AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1344450


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1344450 MtrunA17_Chr1g0207021 95.547 539 12 2 1 539 1 527 0.0 1025
Msa1344450 MtrunA17_Chr3g0117941 60.338 532 205 3 10 538 3 531 0.0 661
Msa1344450 MtrunA17_Chr8g0364611 59.850 533 208 3 9 538 3 532 0.0 658
Msa1344450 MtrunA17_Chr4g0059331 59.774 532 208 3 10 538 3 531 0.0 654
Msa1344450 MtrunA17_Chr5g0414131 59.125 526 208 5 17 538 15 537 0.0 624
Msa1344450 MtrunA17_Chr3g0134911 54.645 549 209 6 24 538 42 584 0.0 602
Msa1344450 MtrunA17_Chr8g0379171 53.802 526 234 4 17 539 5 524 0.0 581
Msa1344450 MtrunA17_Chr5g0405471 54.412 544 218 7 17 538 26 561 0.0 579
Msa1344450 MtrunA17_Chr2g0284061 54.423 520 227 5 24 539 11 524 0.0 578
Msa1344450 MtrunA17_Chr3g0119521 55.598 518 221 4 24 537 6 518 0.0 562
Msa1344450 MtrunA17_Chr1g0154001 51.938 516 241 4 25 538 36 546 4.64e-180 518
Msa1344450 MtrunA17_Chr8g0367361 32.768 531 302 7 46 536 253 768 2.59e-94 304
Msa1344450 MtrunA17_Chr5g0412181 32.897 535 316 7 32 532 168 693 1.11e-92 298
Msa1344450 MtrunA17_Chr2g0320981 31.911 539 318 10 36 536 151 678 1.33e-86 281
Msa1344450 MtrunA17_Chr4g0027121 31.810 525 312 8 49 536 171 686 1.24e-84 276
Msa1344450 MtrunA17_Chr2g0332871 31.384 513 289 12 52 536 166 643 2.87e-76 253
Msa1344450 MtrunA17_Chr8g0379181 51.852 54 26 0 412 465 7 60 3.15e-12 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1344450 AT1G49960.1 69.143 525 156 3 17 538 4 525 0.0 712
Msa1344450 AT5G62890.1 60.150 532 206 4 10 538 3 531 0.0 650
Msa1344450 AT5G62890.2 60.150 532 206 4 10 538 3 531 0.0 650
Msa1344450 AT5G62890.3 60.150 532 206 4 10 538 3 531 0.0 650
Msa1344450 AT1G60030.1 58.286 525 213 4 17 538 16 537 0.0 635
Msa1344450 AT1G10540.1 56.629 528 220 4 17 538 14 538 0.0 622
Msa1344450 AT5G49990.2 58.767 519 208 3 23 538 12 527 0.0 602
Msa1344450 AT5G49990.3 58.767 519 208 3 23 538 12 527 0.0 602
Msa1344450 AT5G49990.1 58.767 519 208 3 23 538 12 527 0.0 602
Msa1344450 AT5G49990.4 58.767 519 208 3 23 538 12 527 0.0 602
Msa1344450 AT1G65550.1 52.820 532 236 5 17 538 14 540 0.0 588
Msa1344450 AT2G34190.1 55.385 520 222 5 24 539 11 524 0.0 583
Msa1344450 AT5G62890.4 61.220 459 172 4 10 465 3 458 0.0 560
Msa1344450 AT2G05760.1 52.896 518 235 4 24 537 6 518 0.0 550
Msa1344450 AT2G26510.1 50.677 517 248 4 25 538 36 548 4.41e-176 508
Msa1344450 AT1G10540.2 57.407 378 152 4 17 388 14 388 4.54e-150 436
Msa1344450 AT5G25420.1 45.374 454 178 4 17 469 26 410 8.72e-134 395
Msa1344450 AT2G26510.3 52.589 367 168 3 25 388 36 399 2.26e-123 368
Msa1344450 AT2G26510.2 51.977 354 164 3 25 375 36 386 1.76e-116 351
Msa1344450 AT4G38050.1 33.026 542 306 8 36 536 179 704 2.75e-85 279
Msa1344450 AT2G27810.1 32.605 549 322 9 26 536 163 701 2.97e-84 276
Msa1344450 AT2G27810.4 31.763 573 319 11 26 536 163 725 1.41e-79 264
Msa1344450 AT2G27810.2 34.180 433 257 7 26 436 163 589 2.47e-69 234
Msa1344450 AT2G27810.3 34.456 386 225 7 26 389 163 542 1.49e-59 206

Find 139 sgRNAs with CRISPR-Local

Find 252 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATAGATTATCTGTTGTTTA+AGG 0.174437 tig0006807:-62308 Msa1344450:three_prime_UTR
CACTATTCTTGTTCCTTTGA+TGG 0.198717 tig0006807:-66130 Msa1344450:CDS
TCTTCCTGCATTGGTTATTC+TGG 0.207207 tig0006807:-65243 Msa1344450:CDS
GTTTATAAATCAGGTAAATT+TGG 0.217881 tig0006807:-63270 Msa1344450:intron
GGTGGTGGTGGAGGAGGTGG+TGG 0.231755 tig0006807:-66405 Msa1344450:CDS
CAATACACGGCTGCTATTAT+TGG 0.243252 tig0006807:+63222 None:intergenic
GGTGGTGGTGGTGGAGGAGG+TGG 0.258082 tig0006807:-66408 Msa1344450:CDS
TGAAATAAATGAGTGCATTT+AGG 0.262305 tig0006807:+62477 None:intergenic
AATTATAGTTGCTTACTTCT+TGG 0.265429 tig0006807:-62644 Msa1344450:CDS
GCCTTGTTTGGCGCAGCAAC+TGG 0.284735 tig0006807:-63801 Msa1344450:CDS
CTCGAATATCTCACACTATC+TGG 0.311355 tig0006807:-62831 Msa1344450:CDS
TCCTTTGTTCAAGGAATGAT+TGG 0.311355 tig0006807:-65642 Msa1344450:CDS
CAGATTATTGCAATAGTTGT+AGG 0.331238 tig0006807:-62364 Msa1344450:three_prime_UTR
GGTGAAAGTGGTGGTGGTGG+TGG 0.333045 tig0006807:-66420 Msa1344450:CDS
ACTCTTCTGGATGCCTTGTT+TGG 0.338596 tig0006807:-63813 Msa1344450:CDS
CTTATTGCTTCCTTTGTTCA+AGG 0.341648 tig0006807:-65651 Msa1344450:CDS
ACTAGGCTTCCAGTGGTTAT+AGG 0.341886 tig0006807:-65925 Msa1344450:CDS
TTAGGGTATAGGCACTCTTC+TGG 0.345374 tig0006807:-63826 Msa1344450:intron
GTTCCCCTTGTAACTCTAAC+TGG 0.347094 tig0006807:-65437 Msa1344450:CDS
TCTAGTATATCTACACAAAT+AGG 0.351405 tig0006807:-62403 Msa1344450:three_prime_UTR
GACAGACCTGACGAGGATTA+AGG 0.355818 tig0006807:+65839 None:intergenic
AATCTCTTGTAACAGTCAAC+TGG 0.358889 tig0006807:-64012 Msa1344450:intron
TACTTAGCCGCGGTGTTGGC+TGG 0.363924 tig0006807:-63936 Msa1344450:CDS
GGACATGGCCCTGCTCATAC+TGG 0.367899 tig0006807:-62810 Msa1344450:CDS
TTCATCGCTGCATCAAGATT+TGG 0.370746 tig0006807:-63985 Msa1344450:CDS
TTACTGTTGATTGCTGTGTT+AGG 0.377345 tig0006807:-66341 Msa1344450:CDS
GGCCTAGGACTCTTTGTGAT+AGG 0.379791 tig0006807:-65416 Msa1344450:CDS
TGAGCAGCTTCAGCTGGACT+TGG 0.390320 tig0006807:-62945 Msa1344450:intron
CAACATTACATTGTTATGCT+TGG 0.391706 tig0006807:-66171 Msa1344450:CDS
TATACTAGAAACTATGAGAT+TGG 0.394869 tig0006807:+62417 None:intergenic
AGTTGCCGTACTGACCGATC+TGG 0.396352 tig0006807:-64710 Msa1344450:CDS
ACTATTCTTGTTCCTTTGAT+GGG 0.400549 tig0006807:-66129 Msa1344450:CDS
GTGTTAGGAGCTCACCTTCA+TGG 0.405039 tig0006807:-66326 Msa1344450:CDS
GCTGGTGAAAGTGGTGGTGG+TGG 0.405192 tig0006807:-66423 Msa1344450:CDS
AGTTTGATGATTTAGGGTAT+AGG 0.429815 tig0006807:-63837 Msa1344450:intron
GCCTAGGACTCTTTGTGATA+GGG 0.430014 tig0006807:-65415 Msa1344450:CDS
AGTCAAAATGCAGGATTGTT+GGG 0.433330 tig0006807:-63617 Msa1344450:CDS
GAGTTCCGTATCCATTTCAA+TGG 0.438140 tig0006807:-64405 Msa1344450:CDS
ATCAGAAGTGATGAGTTCTA+TGG 0.440514 tig0006807:-62535 Msa1344450:CDS
CTGTGATGAGCAGCTTCAGC+TGG 0.443945 tig0006807:-62951 Msa1344450:intron
ACTTCTGATATCCTGATTGA+AGG 0.449917 tig0006807:+62549 None:intergenic
AAAATTCAGGACCTTCAATC+AGG 0.451074 tig0006807:-62560 Msa1344450:CDS
TAGTCAAAATGCAGGATTGT+TGG 0.453962 tig0006807:-63618 Msa1344450:CDS
TGTTGGGTCTAACACGCGTT+GGG 0.454667 tig0006807:-63601 Msa1344450:CDS
TGCAGACATGGCTTGGAACT+AGG 0.457743 tig0006807:-65942 Msa1344450:CDS
TTGGCAGATTGTGTTGAGAT+TGG 0.458776 tig0006807:-65266 Msa1344450:CDS
CATCAAAGGAACAAGAATAG+TGG 0.469158 tig0006807:+66131 None:intergenic
TCTGTACTTAGCCGCGGTGT+TGG 0.469403 tig0006807:-63940 Msa1344450:CDS
TAGCCGCGGTGTTGGCTGGC+TGG 0.472588 tig0006807:-63932 Msa1344450:intron
TGTGTTCTCTTTGCATATGT+CGG 0.473198 tig0006807:-63201 Msa1344450:intron
AGTTCCGTATCCATTTCAAT+GGG 0.475091 tig0006807:-64404 Msa1344450:CDS
ACAGTAAGTTGTTCCTTGAC+AGG 0.477631 tig0006807:+66357 None:intergenic
ACTCTGTTGCAGACATGGCT+TGG 0.479227 tig0006807:-65949 Msa1344450:CDS
TGTATTCCTTAATCCTCGTC+AGG 0.479851 tig0006807:-65845 Msa1344450:intron
TGAGATTGGTCTTCCTGCAT+TGG 0.479893 tig0006807:-65252 Msa1344450:CDS
CTAGGCCAGTTAGAGTTACA+AGG 0.480139 tig0006807:+65432 None:intergenic
CTTGTTCCTTTGATGGGTGG+TGG 0.483527 tig0006807:-66123 Msa1344450:CDS
AGTTGTTCCTTGACAGGATG+AGG 0.494608 tig0006807:+66363 None:intergenic
ATACTAGAAACTATGAGATT+GGG 0.495198 tig0006807:+62418 None:intergenic
ATATCACCAACATTGAAAGT+AGG 0.500875 tig0006807:+64376 None:intergenic
TGCCCCTTGAATAGCTCTCA+TGG 0.504533 tig0006807:+65677 None:intergenic
TTCTCTTGTTGCAATTGTAG+AGG 0.505227 tig0006807:-64335 Msa1344450:intron
GAGAATGCCACAGAAATAGC+TGG 0.506607 tig0006807:+65880 None:intergenic
GGTTAATTACTGCCGCTCCA+TGG 0.508265 tig0006807:-64688 Msa1344450:intron
TATCACCAACATTGAAAGTA+GGG 0.515321 tig0006807:+64377 None:intergenic
CTTGTAACTCTAACTGGCCT+AGG 0.515850 tig0006807:-65431 Msa1344450:CDS
TCAACACTCTGTTGCAGACA+TGG 0.520169 tig0006807:-65954 Msa1344450:CDS
TCTTTGTGATAGGGTTTCCA+AGG 0.520833 tig0006807:-65406 Msa1344450:CDS
AGAGTCATTCAAATATCAGC+TGG 0.521155 tig0006807:-63572 Msa1344450:CDS
ATGACCAGAATAACCAATGC+AGG 0.528438 tig0006807:+65239 None:intergenic
TTTGCAGTCATAGTCACGAT+TGG 0.530572 tig0006807:-64806 Msa1344450:CDS
TACAGATCAATGTTCATCGT+TGG 0.532814 tig0006807:-62894 Msa1344450:CDS
GAGGTGGATCCAGTATGAGC+AGG 0.532820 tig0006807:+62801 None:intergenic
TATTCTGGTCATCCTCTCCC+AGG 0.534906 tig0006807:-65228 Msa1344450:intron
ACCCTATCACAAAGAGTCCT+AGG 0.536299 tig0006807:+65414 None:intergenic
TCCAATCATTCCTTGAACAA+AGG 0.540616 tig0006807:+65641 None:intergenic
GTTGCCGTACTGACCGATCT+GGG 0.544476 tig0006807:-64709 Msa1344450:CDS
GGGAGCCCTACTTTCAATGT+TGG 0.546761 tig0006807:-64382 Msa1344450:CDS
CAATCCATGAGAGCTATTCA+AGG 0.546761 tig0006807:-65681 Msa1344450:CDS
TCCAGTTGCTGCGCCAAACA+AGG 0.547910 tig0006807:+63800 None:intergenic
AAAGATGCTCCTATAACCAC+TGG 0.549867 tig0006807:+65916 None:intergenic
AATGAGTGCATTTAGGCTGA+AGG 0.552105 tig0006807:+62484 None:intergenic
TAGTCACGATTGGAATTGCA+TGG 0.554844 tig0006807:-64796 Msa1344450:CDS
TCTTATTCCAGCTATTTCTG+TGG 0.555907 tig0006807:-65887 Msa1344450:CDS
CCCACTGTCACGGTGAGTTG+AGG 0.557039 tig0006807:+62597 None:intergenic
ATTCTTGTTCCTTTGATGGG+TGG 0.557666 tig0006807:-66126 Msa1344450:CDS
GCAGCTGGTGAAAGTGGTGG+TGG 0.562807 tig0006807:-66426 Msa1344450:CDS
ATCGCTGCATCAAGATTTGG+CGG 0.564712 tig0006807:-63982 Msa1344450:CDS
TCGTGACTATGACTGCAAAT+CGG 0.567669 tig0006807:+64810 None:intergenic
CAGATAGTGTGAGATATTCG+AGG 0.569216 tig0006807:+62832 None:intergenic
CCACAAAAGATTAAATCAAG+AGG 0.575339 tig0006807:-64839 Msa1344450:CDS
ACCAGTGTCTCCCACTGTCA+CGG 0.575457 tig0006807:+62587 None:intergenic
CGGCAGTAATTAACCCAGAT+CGG 0.576534 tig0006807:+64696 None:intergenic
ATGAGTGCATTTAGGCTGAA+GGG 0.578950 tig0006807:+62485 None:intergenic
GAAAGAGAAACAATGGCAGC+TGG 0.580304 tig0006807:-66441 None:intergenic
AATCCATGAGAGCTATTCAA+GGG 0.583596 tig0006807:-65680 Msa1344450:CDS
AGTCACGATTGGAATTGCAT+GGG 0.588659 tig0006807:-64795 Msa1344450:CDS
ATGGGTTACTTACGCCATGA+AGG 0.588819 tig0006807:+66312 None:intergenic
TAAAGTAACATACCTGGGAG+AGG 0.589098 tig0006807:+65216 None:intergenic
ACCGTGACAGTGGGAGACAC+TGG 0.589213 tig0006807:-62588 Msa1344450:CDS
TTATTGCATTTGCAGCTGAA+GGG 0.589241 tig0006807:-66209 Msa1344450:intron
GCCTCAACTCACCGTGACAG+TGG 0.591700 tig0006807:-62598 Msa1344450:CDS
ACGGCTGCTATTATTGGCAA+TGG 0.594763 tig0006807:+63228 None:intergenic
CTTTGTGATAGGGTTTCCAA+GGG 0.595097 tig0006807:-65405 Msa1344450:intron
AAGATATATATTTACCGAGG+TGG 0.597288 tig0006807:+62785 None:intergenic
TTAACCCAGATCGGTCAGTA+CGG 0.603808 tig0006807:+64705 None:intergenic
CCTCAACTCACCGTGACAGT+GGG 0.606252 tig0006807:-62597 Msa1344450:CDS
CAAAATGTACACTGATGCGG+TGG 0.607400 tig0006807:+63776 None:intergenic
AGGTGGATCCAGTATGAGCA+GGG 0.613316 tig0006807:+62802 None:intergenic
ACAATGGCAGCTGGTGAAAG+TGG 0.615031 tig0006807:-66432 Msa1344450:CDS
TTCCGTATCCATTTCAATGG+GGG 0.618485 tig0006807:-64402 Msa1344450:CDS
ACATTGCCACCACCCATCAA+AGG 0.619800 tig0006807:+66117 None:intergenic
TGCTCATACTGGATCCACCT+CGG 0.622784 tig0006807:-62799 Msa1344450:intron
ATCTCTTGTAACAGTCAACT+GGG 0.625026 tig0006807:-64011 Msa1344450:intron
AATAGTGGAAACAATGACAA+TGG 0.627526 tig0006807:+66146 None:intergenic
TTGTTGGGTCTAACACGCGT+TGG 0.628068 tig0006807:-63602 Msa1344450:CDS
GTCACGATTGGAATTGCATG+GGG 0.628860 tig0006807:-64794 Msa1344450:CDS
GTGACAGTGGGAGACACTGG+TGG 0.631148 tig0006807:-62585 Msa1344450:CDS
ACACCGCGGCTAAGTACAGA+AGG 0.633774 tig0006807:+63943 None:intergenic
AGATATTCGAGGAAATATTG+TGG 0.636493 tig0006807:+62843 None:intergenic
GCTTGGAACTAGGCTTCCAG+TGG 0.642697 tig0006807:-65932 Msa1344450:CDS
CCACCTTCTGTACTTAGCCG+CGG 0.651344 tig0006807:-63946 Msa1344450:CDS
CAAGGGGAACAGCACTGAGA+GGG 0.652878 tig0006807:+65450 None:intergenic
TGCAAAGAGAACACAATACA+CGG 0.654533 tig0006807:+63209 None:intergenic
TATCTCACACTATCTGGACA+TGG 0.661111 tig0006807:-62825 Msa1344450:CDS
TAGGCCAGTTAGAGTTACAA+GGG 0.662208 tig0006807:+65433 None:intergenic
GGCGTGTTCACGACTCATAG+TGG 0.664546 tig0006807:+62618 None:intergenic
TTACACAGACAGACCTGACG+AGG 0.671529 tig0006807:+65832 None:intergenic
TACCAAGACTGACCATGGAG+CGG 0.672864 tig0006807:+64676 None:intergenic
ATCCATGAGAGCTATTCAAG+GGG 0.676734 tig0006807:-65679 Msa1344450:CDS
TGACAGTGGGAGACACTGGT+GGG 0.683936 tig0006807:-62584 Msa1344450:CDS
ACAAGGGGAACAGCACTGAG+AGG 0.687831 tig0006807:+65449 None:intergenic
CAACAAAATGTACACTGATG+CGG 0.695683 tig0006807:+63773 None:intergenic
CCGCGGCTAAGTACAGAAGG+TGG 0.698072 tig0006807:+63946 None:intergenic
ATGGCAGCTGGTGAAAGTGG+TGG 0.716876 tig0006807:-66429 Msa1344450:CDS
AGGCCAGTTAGAGTTACAAG+GGG 0.717548 tig0006807:+65434 None:intergenic
GTTCCGTATCCATTTCAATG+GGG 0.719924 tig0006807:-64403 Msa1344450:CDS
CAACTGAATTGAGTACTCAG+TGG 0.730095 tig0006807:+64728 None:intergenic
GTACCAGCCAGCCAACACCG+CGG 0.843946 tig0006807:+63929 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTAATTTTGTTATGTTTTG+AGG - tig0006807:62697-62716 Msa1344450:intron 15.0%
!!! TTAATTTTGTTATGTTTTGA+GGG - tig0006807:62698-62717 Msa1344450:intron 15.0%
!! TTGTTAAATAAATGATCATT+AGG + tig0006807:63412-63431 None:intergenic 15.0%
!!! TTTAATTTTTAGTTTCCATT+TGG - tig0006807:64663-64682 Msa1344450:intron 15.0%
!! AAACCAAATTACAACAAAAT+GGG + tig0006807:62440-62459 None:intergenic 20.0%
!! AAAACCAAATTACAACAAAA+TGG + tig0006807:62441-62460 None:intergenic 20.0%
!! CTTTATGAGAAACAAAAAAT+GGG + tig0006807:62473-62492 None:intergenic 20.0%
!! ACTTTATGAGAAACAAAAAA+TGG + tig0006807:62474-62493 None:intergenic 20.0%
!!! ACTTTTTCTTCATTTTTGTT+TGG - tig0006807:62659-62678 Msa1344450:CDS 20.0%
!!! ATTTAACAAACATACTCTTT+TGG - tig0006807:63423-63442 Msa1344450:intron 20.0%
!! ATTAAAGTAAGAGATTTGAA+TGG - tig0006807:63753-63772 Msa1344450:intron 20.0%
!! TGTTTACAACTAAATGTTAT+TGG - tig0006807:64198-64217 Msa1344450:intron 20.0%
!! GTTTACAACTAAATGTTATT+GGG - tig0006807:64199-64218 Msa1344450:intron 20.0%
!! AATATCAAAGTATAACCAAA+TGG + tig0006807:64681-64700 None:intergenic 20.0%
!! AGTAAAAAACAAATTATCCA+AGG + tig0006807:65053-65072 None:intergenic 20.0%
!! GTTTATAAATCAGGTAAATT+TGG - tig0006807:65461-65480 Msa1344450:CDS 20.0%
!!! TAATTTTATCATCCTTATGT+TGG - tig0006807:65595-65614 Msa1344450:intron 20.0%
!!! CGAAATCACTTATTTTTTTT+TGG + tig0006807:65654-65673 None:intergenic 20.0%
!!! GAAAGAATTTGACATTTTAA+AGG + tig0006807:65738-65757 None:intergenic 20.0%
!! AATCAAAATAAGAATCAAAG+TGG + tig0006807:66004-66023 None:intergenic 20.0%
!!! TATAGATTATCTGTTGTTTA+AGG - tig0006807:66423-66442 Msa1344450:CDS 20.0%
!!! TAACCCATTTTGTTGTAATT+TGG - tig0006807:62434-62453 Msa1344450:three_prime_UTR 25.0%
!!! TCTCATAAAGTTTTAAGCTT+TGG - tig0006807:62483-62502 Msa1344450:exon 25.0%
! CTTTACATAGATTGTTTACT+TGG - tig0006807:62951-62970 Msa1344450:intron 25.0%
!! ATGAATAGTTTTCATTAGCT+TGG - tig0006807:62976-62995 Msa1344450:intron 25.0%
!! ATAGTGTCTTTTAATGCATT+TGG - tig0006807:63165-63184 Msa1344450:intron 25.0%
! GATGTATTTATTCATATTGC+AGG - tig0006807:63250-63269 Msa1344450:CDS 25.0%
! GTAAATAAAGTAACATACCT+GGG + tig0006807:63523-63542 None:intergenic 25.0%
! TGCTACACAAATATTTCAAA+AGG + tig0006807:63578-63597 None:intergenic 25.0%
! ATATCACTGAGTAAATTACA+AGG + tig0006807:63662-63681 None:intergenic 25.0%
!! TAAATATAGACTAACTTGTG+TGG - tig0006807:64445-64464 Msa1344450:intron 25.0%
!! AAATATAGACTAACTTGTGT+GGG - tig0006807:64446-64465 Msa1344450:intron 25.0%
! TATATCCGAATATTGTAATC+TGG - tig0006807:64616-64635 Msa1344450:intron 25.0%
! AATAGCCAGATTACAATATT+CGG + tig0006807:64624-64643 None:intergenic 25.0%
!! TGTTGAAGTTTGATGATTTA+GGG - tig0006807:64888-64907 Msa1344450:intron 25.0%
!! ATGCTTTTCTTCTCTATATT+TGG - tig0006807:65186-65205 Msa1344450:intron 25.0%
!! AAACAATTTGTTCATTCCTA+TGG - tig0006807:65297-65316 Msa1344450:intron 25.0%
! ATTTACCTGATTTATAAACC+CGG + tig0006807:65460-65479 None:intergenic 25.0%
!! TCTAAGATATATATTTACCG+AGG + tig0006807:65952-65971 None:intergenic 25.0%
! AATTATAGTTGCTTACTTCT+TGG - tig0006807:66087-66106 Msa1344450:intron 25.0%
! AAAAATCTGTTCAGATTCAT+AGG + tig0006807:66226-66245 None:intergenic 25.0%
! TGAAATAAATGAGTGCATTT+AGG + tig0006807:66257-66276 None:intergenic 25.0%
! ATACTAGAAACTATGAGATT+GGG + tig0006807:66316-66335 None:intergenic 25.0%
! TATACTAGAAACTATGAGAT+TGG + tig0006807:66317-66336 None:intergenic 25.0%
! TCTAGTATATCTACACAAAT+AGG - tig0006807:66328-66347 Msa1344450:CDS 25.0%
CAACATTACATTGTTATGCT+TGG - tig0006807:62560-62579 Msa1344450:CDS 30.0%
! AATAGTGGAAACAATGACAA+TGG + tig0006807:62588-62607 None:intergenic 30.0%
ACTATTCTTGTTCCTTTGAT+GGG - tig0006807:62602-62621 Msa1344450:CDS 30.0%
!! GTGTTAATTTGTTGTGTTCT+TGG - tig0006807:63005-63024 Msa1344450:intron 30.0%
!! TTCTTGGTTTCATTTTTCAG+AGG - tig0006807:63021-63040 Msa1344450:intron 30.0%
!!! CAAGGAATGATTGGATTTTT+TGG - tig0006807:63098-63117 Msa1344450:intron 30.0%
!!! TGATTGGATTTTTTGGATTC+TGG - tig0006807:63105-63124 Msa1344450:intron 30.0%
!!! GATTGGATTTTTTGGATTCT+GGG - tig0006807:63106-63125 Msa1344450:intron 30.0%
!!! ATTGGATTTTTTGGATTCTG+GGG - tig0006807:63107-63126 Msa1344450:intron 30.0%
!!! GATGAAATCAGTTCTAGTTT+TGG - tig0006807:63195-63214 Msa1344450:intron 30.0%
GGTAAATAAAGTAACATACC+TGG + tig0006807:63524-63543 None:intergenic 30.0%
AAGATGTTGAATGAGATAGA+GGG + tig0006807:63546-63565 None:intergenic 30.0%
AAAGATGTTGAATGAGATAG+AGG + tig0006807:63547-63566 None:intergenic 30.0%
GTAAATTACAAGGTAAGAGT+TGG + tig0006807:63652-63671 None:intergenic 30.0%
AAAGTAAGAGATTTGAATGG+TGG - tig0006807:63756-63775 Msa1344450:intron 30.0%
!! TTGATGTTCTTTCCACTTTT+TGG - tig0006807:63843-63862 Msa1344450:intron 30.0%
!! ACATTGGTTTAACCAAAAAG+TGG + tig0006807:63858-63877 None:intergenic 30.0%
! CCTCTTGATTTAATCTTTTG+TGG + tig0006807:63895-63914 None:intergenic 30.0%
CCACAAAAGATTAAATCAAG+AGG - tig0006807:63892-63911 Msa1344450:intron 30.0%
!!! ATTTGCTGAAATTTTGACTG+CGG - tig0006807:63960-63979 Msa1344450:CDS 30.0%
GACGTAATAGATGATATCTT+AGG - tig0006807:64142-64161 Msa1344450:intron 30.0%
GTAGAGAAAGCTAATTCAAA+TGG + tig0006807:64270-64289 None:intergenic 30.0%
TATCACCAACATTGAAAGTA+GGG + tig0006807:64357-64376 None:intergenic 30.0%
ATATCACCAACATTGAAAGT+AGG + tig0006807:64358-64377 None:intergenic 30.0%
! AATATAGACTAACTTGTGTG+GGG - tig0006807:64447-64466 Msa1344450:intron 30.0%
CTGTTACAAGAGATTGAAAA+GGG + tig0006807:64714-64733 None:intergenic 30.0%
ACTGTTACAAGAGATTGAAA+AGG + tig0006807:64715-64734 None:intergenic 30.0%
! GTGTTGAAGTTTGATGATTT+AGG - tig0006807:64887-64906 Msa1344450:intron 30.0%
! AGTTTGATGATTTAGGGTAT+AGG - tig0006807:64894-64913 Msa1344450:intron 30.0%
CCTAAGAACTATTTGACAAT+AGG + tig0006807:64998-65017 None:intergenic 30.0%
CCTATTGTCAAATAGTTCTT+AGG - tig0006807:64995-65014 Msa1344450:intron 30.0%
TTATTAAGTGTCTTTGACCT+TGG - tig0006807:65033-65052 Msa1344450:intron 30.0%
! TTTCCTTTTAGTCAAAATGC+AGG - tig0006807:65105-65124 Msa1344450:intron 30.0%
!!! AATCCTGCATTTTGACTAAA+AGG + tig0006807:65111-65130 None:intergenic 30.0%
ATACTCAGAAATTCACAGAA+GGG + tig0006807:65226-65245 None:intergenic 30.0%
AATACTCAGAAATTCACAGA+AGG + tig0006807:65227-65246 None:intergenic 30.0%
TAAATGTGAGAACAATGTTG+TGG + tig0006807:65374-65393 None:intergenic 30.0%
AGATATTCGAGGAAATATTG+TGG + tig0006807:65891-65910 None:intergenic 30.0%
AAGATATATATTTACCGAGG+TGG + tig0006807:65949-65968 None:intergenic 30.0%
CAGATTATTGCAATAGTTGT+AGG - tig0006807:66367-66386 Msa1344450:CDS 30.0%
! TTACTGTTGATTGCTGTGTT+AGG - tig0006807:62390-62409 Msa1344450:three_prime_UTR 35.0%
TTTATTGCATTTGCAGCTGA+AGG - tig0006807:62521-62540 Msa1344450:CDS 35.0%
TTATTGCATTTGCAGCTGAA+GGG - tig0006807:62522-62541 Msa1344450:CDS 35.0%
CATCAAAGGAACAAGAATAG+TGG + tig0006807:62603-62622 None:intergenic 35.0%
CACTATTCTTGTTCCTTTGA+TGG - tig0006807:62601-62620 Msa1344450:CDS 35.0%
!!! ATGTTTTGAGGGAAAACTGT+AGG - tig0006807:62709-62728 Msa1344450:intron 35.0%
!! TCTTATTCCAGCTATTTCTG+TGG - tig0006807:62844-62863 Msa1344450:CDS 35.0%
AATGTACAACTACAACAGCA+TGG + tig0006807:62925-62944 None:intergenic 35.0%
AATCCATGAGAGCTATTCAA+GGG - tig0006807:63051-63070 Msa1344450:intron 35.0%
CTTATTGCTTCCTTTGTTCA+AGG - tig0006807:63080-63099 Msa1344450:intron 35.0%
TCCTTTGTTCAAGGAATGAT+TGG - tig0006807:63089-63108 Msa1344450:intron 35.0%
TCCAATCATTCCTTGAACAA+AGG + tig0006807:63093-63112 None:intergenic 35.0%
!! TTTGGATTCTGGGGAATTTT+TGG - tig0006807:63116-63135 Msa1344450:intron 35.0%
TTTACTGTGATTCCTGTAGT+TGG - tig0006807:63446-63465 Msa1344450:intron 35.0%
AGATGTTGAATGAGATAGAG+GGG + tig0006807:63545-63564 None:intergenic 35.0%
AGTTCCGTATCCATTTCAAT+GGG - tig0006807:64327-64346 Msa1344450:intron 35.0%
TTCTCTTGTTGCAATTGTAG+AGG - tig0006807:64396-64415 Msa1344450:CDS 35.0%
!!! GGATCGGTGTTATACATTTT+CGG - tig0006807:64468-64487 Msa1344450:intron 35.0%
CCACAATGTCATATTGATCA+TGG + tig0006807:64538-64557 None:intergenic 35.0%
CCATGATCAATATGACATTG+TGG - tig0006807:64535-64554 Msa1344450:intron 35.0%
!! TCTGGCTATTTCTAAGTAGA+AGG - tig0006807:64634-64653 Msa1344450:intron 35.0%
AATCTCTTGTAACAGTCAAC+TGG - tig0006807:64719-64738 Msa1344450:CDS 35.0%
ATCTCTTGTAACAGTCAACT+GGG - tig0006807:64720-64739 Msa1344450:CDS 35.0%
CAACAAAATGTACACTGATG+CGG + tig0006807:64961-64980 None:intergenic 35.0%
TAGTCAAAATGCAGGATTGT+TGG - tig0006807:65113-65132 Msa1344450:intron 35.0%
AGTCAAAATGCAGGATTGTT+GGG - tig0006807:65114-65133 Msa1344450:intron 35.0%
AGAGTCATTCAAATATCAGC+TGG - tig0006807:65159-65178 Msa1344450:intron 35.0%
GCCTAATTACTTACTGTATC+CGG - tig0006807:65438-65457 Msa1344450:CDS 35.0%
CCTAATTACTTACTGTATCC+GGG - tig0006807:65439-65458 Msa1344450:CDS 35.0%
TGTATCCGGGTTTATAAATC+AGG - tig0006807:65452-65471 Msa1344450:CDS 35.0%
TGCAAAGAGAACACAATACA+CGG + tig0006807:65525-65544 None:intergenic 35.0%
TGTGTTCTCTTTGCATATGT+CGG - tig0006807:65530-65549 Msa1344450:intron 35.0%
TACAGATCAATGTTCATCGT+TGG - tig0006807:65837-65856 Msa1344450:intron 35.0%
GTGGTTATACTTATAGCAAG+AGG + tig0006807:65985-66004 None:intergenic 35.0%
AAAATTCAGGACCTTCAATC+AGG - tig0006807:66171-66190 Msa1344450:CDS 35.0%
ACTTCTGATATCCTGATTGA+AGG + tig0006807:66185-66204 None:intergenic 35.0%
ATCAGAAGTGATGAGTTCTA+TGG - tig0006807:66196-66215 Msa1344450:CDS 35.0%
! TTTTCAACCTCATCCTGTCA+AGG - tig0006807:62361-62380 Msa1344450:three_prime_UTR 40.0%
ACAGTAAGTTGTTCCTTGAC+AGG + tig0006807:62377-62396 None:intergenic 40.0%
! CAGCTGAAGGGATTTTTCTT+GGG - tig0006807:62534-62553 Msa1344450:CDS 40.0%
ATTCTTGTTCCTTTGATGGG+TGG - tig0006807:62605-62624 Msa1344450:CDS 40.0%
!! TTTTGAGGGAAAACTGTAGG+TGG - tig0006807:62712-62731 Msa1344450:intron 40.0%
AAAGATGCTCCTATAACCAC+TGG + tig0006807:62818-62837 None:intergenic 40.0%
TGTATTCCTTAATCCTCGTC+AGG - tig0006807:62886-62905 Msa1344450:CDS 40.0%
CAATCCATGAGAGCTATTCA+AGG - tig0006807:63050-63069 Msa1344450:intron 40.0%
ATCCATGAGAGCTATTCAAG+GGG - tig0006807:63052-63071 Msa1344450:intron 40.0%
!! GATTCTGGGGAATTTTTGGA+AGG - tig0006807:63120-63139 Msa1344450:intron 40.0%
TAGGCCAGTTAGAGTTACAA+GGG + tig0006807:63301-63320 None:intergenic 40.0%
TCTTTGTGATAGGGTTTCCA+AGG - tig0006807:63325-63344 Msa1344450:intron 40.0%
CTTTGTGATAGGGTTTCCAA+GGG - tig0006807:63326-63345 Msa1344450:intron 40.0%
GAGAGAAATGTGTTTACCCT+TGG + tig0006807:63345-63364 None:intergenic 40.0%
TTGGCAGATTGTGTTGAGAT+TGG - tig0006807:63465-63484 Msa1344450:intron 40.0%
!! TCTTCCTGCATTGGTTATTC+TGG - tig0006807:63488-63507 Msa1344450:intron 40.0%
ATGACCAGAATAACCAATGC+AGG + tig0006807:63495-63514 None:intergenic 40.0%
TAAAGTAACATACCTGGGAG+AGG + tig0006807:63518-63537 None:intergenic 40.0%
TCGTGACTATGACTGCAAAT+CGG + tig0006807:63924-63943 None:intergenic 40.0%
TTTGCAGTCATAGTCACGAT+TGG - tig0006807:63925-63944 Msa1344450:intron 40.0%
TAGTCACGATTGGAATTGCA+TGG - tig0006807:63935-63954 Msa1344450:CDS 40.0%
AGTCACGATTGGAATTGCAT+GGG - tig0006807:63936-63955 Msa1344450:CDS 40.0%
CAACTGAATTGAGTACTCAG+TGG + tig0006807:64006-64025 None:intergenic 40.0%
AGCTTTCTGTACATCTATGC+AGG - tig0006807:64299-64318 Msa1344450:intron 40.0%
GAGTTCCGTATCCATTTCAA+TGG - tig0006807:64326-64345 Msa1344450:intron 40.0%
GTTCCGTATCCATTTCAATG+GGG - tig0006807:64328-64347 Msa1344450:intron 40.0%
TTCCGTATCCATTTCAATGG+GGG - tig0006807:64329-64348 Msa1344450:intron 40.0%
TTCATCGCTGCATCAAGATT+TGG - tig0006807:64746-64765 Msa1344450:CDS 40.0%
GACAATAGGTAGTGAGAAGA+GGG + tig0006807:64984-65003 None:intergenic 40.0%
TGACAATAGGTAGTGAGAAG+AGG + tig0006807:64985-65004 None:intergenic 40.0%
AGATATTCCAACGAAGCCAT+AGG + tig0006807:65316-65335 None:intergenic 40.0%
CCCGGATACAGTAAGTAATT+AGG + tig0006807:65442-65461 None:intergenic 40.0%
CAATACACGGCTGCTATTAT+TGG + tig0006807:65512-65531 None:intergenic 40.0%
!!! GTTGGCTTTTCTCTCTTCAT+AGG - tig0006807:65855-65874 Msa1344450:CDS 40.0%
CAGATAGTGTGAGATATTCG+AGG + tig0006807:65902-65921 None:intergenic 40.0%
CTCGAATATCTCACACTATC+TGG - tig0006807:65900-65919 Msa1344450:CDS 40.0%
TATCTCACACTATCTGGACA+TGG - tig0006807:65906-65925 Msa1344450:CDS 40.0%
ATGAGTGCATTTAGGCTGAA+GGG + tig0006807:66249-66268 None:intergenic 40.0%
AATGAGTGCATTTAGGCTGA+AGG + tig0006807:66250-66269 None:intergenic 40.0%
AGTTGTTCCTTGACAGGATG+AGG + tig0006807:62371-62390 None:intergenic 45.0%
! ATGGGTTACTTACGCCATGA+AGG + tig0006807:62422-62441 None:intergenic 45.0%
! GCAGCTGAAGGGATTTTTCT+TGG - tig0006807:62533-62552 Msa1344450:CDS 45.0%
!!! CAGACACTGCTTTTTGTTGC+TGG - tig0006807:62752-62771 Msa1344450:intron 45.0%
TCAACACTCTGTTGCAGACA+TGG - tig0006807:62777-62796 Msa1344450:intron 45.0%
ACTAGGCTTCCAGTGGTTAT+AGG - tig0006807:62806-62825 Msa1344450:CDS 45.0%
GAGAATGCCACAGAAATAGC+TGG + tig0006807:62854-62873 None:intergenic 45.0%
GTTCCCCTTGTAACTCTAAC+TGG - tig0006807:63294-63313 Msa1344450:intron 45.0%
AGGCCAGTTAGAGTTACAAG+GGG + tig0006807:63300-63319 None:intergenic 45.0%
CTAGGCCAGTTAGAGTTACA+AGG + tig0006807:63302-63321 None:intergenic 45.0%
! CTTGTAACTCTAACTGGCCT+AGG - tig0006807:63300-63319 Msa1344450:intron 45.0%
GCCTAGGACTCTTTGTGATA+GGG - tig0006807:63316-63335 Msa1344450:intron 45.0%
ACCCTATCACAAAGAGTCCT+AGG + tig0006807:63320-63339 None:intergenic 45.0%
CAACACAATCTGCCAACTAC+AGG + tig0006807:63461-63480 None:intergenic 45.0%
!! TGAGATTGGTCTTCCTGCAT+TGG - tig0006807:63479-63498 Msa1344450:intron 45.0%
GGAATGTACTGCAACGACAT+TGG + tig0006807:63874-63893 None:intergenic 45.0%
GTCACGATTGGAATTGCATG+GGG - tig0006807:63937-63956 Msa1344450:CDS 45.0%
TTAACCCAGATCGGTCAGTA+CGG + tig0006807:64029-64048 None:intergenic 45.0%
CGGCAGTAATTAACCCAGAT+CGG + tig0006807:64038-64057 None:intergenic 45.0%
! AGGCTCCAAAGCATCAAACT+AGG - tig0006807:64162-64181 Msa1344450:intron 45.0%
CTCTGCCTAGTTTGATGCTT+TGG + tig0006807:64170-64189 None:intergenic 45.0%
TTGCACCTCTGACTTCTTTG+TGG - tig0006807:64237-64256 Msa1344450:intron 45.0%
ACATGCCACAAAGAAGTCAG+AGG + tig0006807:64245-64264 None:intergenic 45.0%
CTCCCCCATTGAAATGGATA+CGG + tig0006807:64334-64353 None:intergenic 45.0%
! AGACTAACTTGTGTGGGGAT+CGG - tig0006807:64452-64471 Msa1344450:intron 45.0%
ATCGCTGCATCAAGATTTGG+CGG - tig0006807:64749-64768 Msa1344450:CDS 45.0%
TTAGGGTATAGGCACTCTTC+TGG - tig0006807:64905-64924 Msa1344450:intron 45.0%
! ACTCTTCTGGATGCCTTGTT+TGG - tig0006807:64918-64937 Msa1344450:intron 45.0%
CAAAATGTACACTGATGCGG+TGG + tig0006807:64958-64977 None:intergenic 45.0%
GTTCATTCCTATGGCTTCGT+TGG - tig0006807:65306-65325 Msa1344450:intron 45.0%
ACGGCTGCTATTATTGGCAA+TGG + tig0006807:65506-65525 None:intergenic 45.0%
AGTTCTCGCAGACCAACATA+AGG + tig0006807:65610-65629 None:intergenic 45.0%
GACACTGGTGGGAAAAATTC+AGG - tig0006807:66158-66177 Msa1344450:CDS 45.0%
!!! TCATTTTTTATATATTTTTA+TGG - tig0006807:63363-63382 Msa1344450:intron 5.0%
GTGTTAGGAGCTCACCTTCA+TGG - tig0006807:62405-62424 Msa1344450:three_prime_UTR 50.0%
! CTTGTTCCTTTGATGGGTGG+TGG - tig0006807:62608-62627 Msa1344450:CDS 50.0%
ACATTGCCACCACCCATCAA+AGG + tig0006807:62617-62636 None:intergenic 50.0%
ACTCTGTTGCAGACATGGCT+TGG - tig0006807:62782-62801 Msa1344450:intron 50.0%
! TGCAGACATGGCTTGGAACT+AGG - tig0006807:62789-62808 Msa1344450:intron 50.0%
GACAGACCTGACGAGGATTA+AGG + tig0006807:62895-62914 None:intergenic 50.0%
TTACACAGACAGACCTGACG+AGG + tig0006807:62902-62921 None:intergenic 50.0%
TGCCCCTTGAATAGCTCTCA+TGG + tig0006807:63057-63076 None:intergenic 50.0%
GGCCTAGGACTCTTTGTGAT+AGG - tig0006807:63315-63334 Msa1344450:intron 50.0%
TATTCTGGTCATCCTCTCCC+AGG - tig0006807:63503-63522 Msa1344450:intron 50.0%
!!! GCTGAAATTTTGACTGCGGC+TGG - tig0006807:63964-63983 Msa1344450:CDS 50.0%
GGTTAATTACTGCCGCTCCA+TGG - tig0006807:64043-64062 Msa1344450:intron 50.0%
TACCAAGACTGACCATGGAG+CGG + tig0006807:64058-64077 None:intergenic 50.0%
CAAGCTACCAAGACTGACCA+TGG + tig0006807:64063-64082 None:intergenic 50.0%
! CATGGTCAGTCTTGGTAGCT+TGG - tig0006807:64061-64080 Msa1344450:intron 50.0%
GGGAGCCCTACTTTCAATGT+TGG - tig0006807:64349-64368 Msa1344450:CDS 50.0%
TTGTTGGGTCTAACACGCGT+TGG - tig0006807:65129-65148 Msa1344450:intron 50.0%
TGTTGGGTCTAACACGCGTT+GGG - tig0006807:65130-65149 Msa1344450:intron 50.0%
AGGTGGATCCAGTATGAGCA+GGG + tig0006807:65932-65951 None:intergenic 50.0%
TGCTCATACTGGATCCACCT+CGG - tig0006807:65932-65951 Msa1344450:CDS 50.0%
ATGGCAGCTGGTGAAAGTGG+TGG - tig0006807:62302-62321 Msa1344450:three_prime_UTR 55.0%
GCTTGGAACTAGGCTTCCAG+TGG - tig0006807:62799-62818 Msa1344450:intron 55.0%
! CAAGGGGAACAGCACTGAGA+GGG + tig0006807:63284-63303 None:intergenic 55.0%
! ACAAGGGGAACAGCACTGAG+AGG + tig0006807:63285-63304 None:intergenic 55.0%
! AGTTGCCGTACTGACCGATC+TGG - tig0006807:64021-64040 Msa1344450:intron 55.0%
! GTTGCCGTACTGACCGATCT+GGG - tig0006807:64022-64041 Msa1344450:intron 55.0%
GTAGGGCTCCCCCATTGAAA+TGG + tig0006807:64340-64359 None:intergenic 55.0%
CCACCTTCTGTACTTAGCCG+CGG - tig0006807:64785-64804 Msa1344450:CDS 55.0%
ACACCGCGGCTAAGTACAGA+AGG + tig0006807:64791-64810 None:intergenic 55.0%
TCTGTACTTAGCCGCGGTGT+TGG - tig0006807:64791-64810 Msa1344450:CDS 55.0%
TCCAGTTGCTGCGCCAAACA+AGG + tig0006807:64934-64953 None:intergenic 55.0%
CTGTGATGAGCAGCTTCAGC+TGG - tig0006807:65780-65799 Msa1344450:intron 55.0%
TGAGCAGCTTCAGCTGGACT+TGG - tig0006807:65786-65805 Msa1344450:intron 55.0%
GAGGTGGATCCAGTATGAGC+AGG + tig0006807:65933-65952 None:intergenic 55.0%
GGCGTGTTCACGACTCATAG+TGG + tig0006807:66116-66135 None:intergenic 55.0%
CCTCAACTCACCGTGACAGT+GGG - tig0006807:66134-66153 Msa1344450:CDS 55.0%
ACCAGTGTCTCCCACTGTCA+CGG + tig0006807:66147-66166 None:intergenic 55.0%
TGACAGTGGGAGACACTGGT+GGG - tig0006807:66147-66166 Msa1344450:CDS 55.0%
GCAGCTGGTGAAAGTGGTGG+TGG - tig0006807:62305-62324 Msa1344450:three_prime_UTR 60.0%
!! GCTGGTGAAAGTGGTGGTGG+TGG - tig0006807:62308-62327 Msa1344450:three_prime_UTR 60.0%
!! GGTGAAAGTGGTGGTGGTGG+TGG - tig0006807:62311-62330 Msa1344450:three_prime_UTR 60.0%
!! GAAAGTGGTGGTGGTGGTGG+TGG - tig0006807:62314-62333 Msa1344450:three_prime_UTR 60.0%
TGCCGCTCCATGGTCAGTCT+TGG - tig0006807:64053-64072 Msa1344450:intron 60.0%
CCGCGGCTAAGTACAGAAGG+TGG + tig0006807:64788-64807 None:intergenic 60.0%
!! TACTTAGCCGCGGTGTTGGC+TGG - tig0006807:64795-64814 Msa1344450:CDS 60.0%
!! GCCTTGTTTGGCGCAGCAAC+TGG - tig0006807:64930-64949 Msa1344450:intron 60.0%
GGACATGGCCCTGCTCATAC+TGG - tig0006807:65921-65940 Msa1344450:CDS 60.0%
GCCTCAACTCACCGTGACAG+TGG - tig0006807:66133-66152 Msa1344450:CDS 60.0%
CCCACTGTCACGGTGAGTTG+AGG + tig0006807:66137-66156 None:intergenic 60.0%
ACCGTGACAGTGGGAGACAC+TGG - tig0006807:66143-66162 Msa1344450:CDS 60.0%
GTGACAGTGGGAGACACTGG+TGG - tig0006807:66146-66165 Msa1344450:CDS 60.0%
!! AGTGGTGGTGGTGGTGGTGG+AGG - tig0006807:62317-62336 Msa1344450:three_prime_UTR 65.0%
GTACCAGCCAGCCAACACCG+CGG + tig0006807:64805-64824 None:intergenic 65.0%
!! GGTGGTGGTGGTGGTGGAGG+AGG - tig0006807:62320-62339 Msa1344450:three_prime_UTR 70.0%
!! GGTGGTGGTGGTGGAGGAGG+TGG - tig0006807:62323-62342 Msa1344450:three_prime_UTR 70.0%
!! GGTGGTGGTGGAGGAGGTGG+TGG - tig0006807:62326-62345 Msa1344450:three_prime_UTR 70.0%
!! TAGCCGCGGTGTTGGCTGGC+TGG - tig0006807:64799-64818 Msa1344450:CDS 70.0%
Chromosome Type Strat End Strand Name
tig0006807 gene 62302 66451 62302 ID=Msa1344450;Name=Msa1344450
tig0006807 mRNA 62302 66451 62302 ID=Msa1344450-mRNA-1;Parent=Msa1344450;Name=Msa1344450-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0.84|0.71|1|1|1|14|193|539
tig0006807 exon 62302 62713 62302 ID=Msa1344450-mRNA-1:exon:4547;Parent=Msa1344450-mRNA-1
tig0006807 exon 62800 62960 62800 ID=Msa1344450-mRNA-1:exon:4546;Parent=Msa1344450-mRNA-1
tig0006807 exon 63202 63279 63202 ID=Msa1344450-mRNA-1:exon:4545;Parent=Msa1344450-mRNA-1
tig0006807 exon 63546 63637 63546 ID=Msa1344450-mRNA-1:exon:4544;Parent=Msa1344450-mRNA-1
tig0006807 exon 63777 63844 63777 ID=Msa1344450-mRNA-1:exon:4543;Parent=Msa1344450-mRNA-1
tig0006807 exon 63933 64019 63933 ID=Msa1344450-mRNA-1:exon:4542;Parent=Msa1344450-mRNA-1
tig0006807 exon 64336 64432 64336 ID=Msa1344450-mRNA-1:exon:4541;Parent=Msa1344450-mRNA-1
tig0006807 exon 64689 64867 64689 ID=Msa1344450-mRNA-1:exon:4540;Parent=Msa1344450-mRNA-1
tig0006807 exon 65229 65288 65229 ID=Msa1344450-mRNA-1:exon:4539;Parent=Msa1344450-mRNA-1
tig0006807 exon 65406 65481 65406 ID=Msa1344450-mRNA-1:exon:4538;Parent=Msa1344450-mRNA-1
tig0006807 exon 65612 65712 65612 ID=Msa1344450-mRNA-1:exon:4537;Parent=Msa1344450-mRNA-1
tig0006807 exon 65846 66022 65846 ID=Msa1344450-mRNA-1:exon:4536;Parent=Msa1344450-mRNA-1
tig0006807 exon 66119 66216 66119 ID=Msa1344450-mRNA-1:exon:4535;Parent=Msa1344450-mRNA-1
tig0006807 exon 66325 66451 66325 ID=Msa1344450-mRNA-1:exon:4534;Parent=Msa1344450-mRNA-1
tig0006807 CDS 66325 66451 66325 ID=Msa1344450-mRNA-1:cds;Parent=Msa1344450-mRNA-1
tig0006807 CDS 66119 66216 66119 ID=Msa1344450-mRNA-1:cds;Parent=Msa1344450-mRNA-1
tig0006807 CDS 65846 66022 65846 ID=Msa1344450-mRNA-1:cds;Parent=Msa1344450-mRNA-1
tig0006807 CDS 65612 65712 65612 ID=Msa1344450-mRNA-1:cds;Parent=Msa1344450-mRNA-1
tig0006807 CDS 65406 65481 65406 ID=Msa1344450-mRNA-1:cds;Parent=Msa1344450-mRNA-1
tig0006807 CDS 65229 65288 65229 ID=Msa1344450-mRNA-1:cds;Parent=Msa1344450-mRNA-1
tig0006807 CDS 64689 64867 64689 ID=Msa1344450-mRNA-1:cds;Parent=Msa1344450-mRNA-1
tig0006807 CDS 64336 64432 64336 ID=Msa1344450-mRNA-1:cds;Parent=Msa1344450-mRNA-1
tig0006807 CDS 63933 64019 63933 ID=Msa1344450-mRNA-1:cds;Parent=Msa1344450-mRNA-1
tig0006807 CDS 63777 63844 63777 ID=Msa1344450-mRNA-1:cds;Parent=Msa1344450-mRNA-1
tig0006807 CDS 63546 63637 63546 ID=Msa1344450-mRNA-1:cds;Parent=Msa1344450-mRNA-1
tig0006807 CDS 63202 63279 63202 ID=Msa1344450-mRNA-1:cds;Parent=Msa1344450-mRNA-1
tig0006807 CDS 62800 62960 62800 ID=Msa1344450-mRNA-1:cds;Parent=Msa1344450-mRNA-1
tig0006807 CDS 62495 62713 62495 ID=Msa1344450-mRNA-1:cds;Parent=Msa1344450-mRNA-1
tig0006807 three_prime_UTR 62302 62494 62302 ID=Msa1344450-mRNA-1:three_prime_utr;Parent=Msa1344450-mRNA-1
Gene Sequence

>Msa1344450

ATGGCAGCTGGTGAAAGTGGTGGTGGTGGTGGTGGAGGAGGTGGTGGAAAAGTTGATCATTTTCAACCTCATCCTGTCAAGGAACAACTTACTGTTGATTGCTGTGTTAGGAGCTCACCTTCATGGCCTGAAGGGATTTTTCTTGGGTTTCAACATTACATTGTTATGCTTGGAACCATTGTCATTGTTTCCACTATTCTTGTTCCTTTGATGGGTGGTGGCAATGTGGAAAAAGCTGAAATGATTCAGACACTGCTTTTTGTTGCTGGAATCAACACTCTGTTGCAGACATGGCTTGGAACTAGGCTTCCAGTGGTTATAGGAGCATCTTTTGCTTTTCTTATTCCAGCTATTTCTGTGGCATTCTCTTCTAGAATGAGTGTATTCCTTAATCCTCGTCAGAGGTTTAAGCAATCCATGAGAGCTATTCAAGGGGCATTGCTTATTGCTTCCTTTGTTCAAGGAATGATTGGATTTTTTGGATTCTGGGGAATTTTTGGAAGGTTTTTAAGCCCTCTCAGTGCTGTTCCCCTTGTAACTCTAACTGGCCTAGGACTCTTTGTGATAGGGTTTCCAAGGTTGGCAGATTGTGTTGAGATTGGTCTTCCTGCATTGGTTATTCTGGTCATCCTCTCCCAGTACATTCCACAAAAGATTAAATCAAGAGGAGTCGACCGATTTGCAGTCATAGTCACGATTGGAATTGCATGGGGATTTGCTGAAATTTTGACTGCGGCTGGTGCATACAACAAAAGACCACTGAGTACTCAATTCAGTTGCCGTACTGACCGATCTGGGTTAATTACTGCCGCTCCATGGATAAGAGTTCCGTATCCATTTCAATGGGGGAGCCCTACTTTCAATGTTGGTGATATTTTTGCAATGATTGCTGCTTCTCTTGTTGCAATTGTAGAGTCAACTGGGACATTCATCGCTGCATCAAGATTTGGCGGTGCAACACATATGCCACCTTCTGTACTTAGCCGCGGTGTTGGCTGGCTGGGTATAGGCACTCTTCTGGATGCCTTGTTTGGCGCAGCAACTGGATCCACCGCATCAGTGTACATTTTTCAAAATGCAGGATTGTTGGGTCTAACACGCGTTGGGAGTCGAAGAGTCATTCAAATATCAGCTGGATTCATGCTTTTCTTCTCTATATTTGGTAAATTTGGAGCAGTGATTGCTGCAATACCATTGCCAATAATAGCAGCCGTGTATTGTGTTCTCTTTGCATATGTCGCTTCAGCTGGACTTGGTTTTCTTCAGTTCTGCAATCTAAACAGCTACAGATCAATGTTCATCGTTGGCTTTTCTCTCTTCATAGGTCTATCTGTTCCACAATATTTCCTCGAATATCTCACACTATCTGGACATGGCCCTGCTCATACTGGATCCACCTCGTTCAACAATATAGTGCAAGTGATTTTCTCATCTGCAGCAACTGTTGCAATTATAGTTGCTTACTTCTTGGATGCCACTATGAGTCGTGAACACGCCTCAACTCACCGTGACAGTGGGAGACACTGGTGGGAAAAATTCAGGACCTTCAATCAGGATATCAGAAGTGATGAGTTCTATGGATTGCCTATGAATCTGAACAGATTTTTCCCTTCAGCCTAA

Protein sequence

>Msa1344450

MAAGESGGGGGGGGGGKVDHFQPHPVKEQLTVDCCVRSSPSWPEGIFLGFQHYIVMLGTIVIVSTILVPLMGGGNVEKAEMIQTLLFVAGINTLLQTWLGTRLPVVIGASFAFLIPAISVAFSSRMSVFLNPRQRFKQSMRAIQGALLIASFVQGMIGFFGFWGIFGRFLSPLSAVPLVTLTGLGLFVIGFPRLADCVEIGLPALVILVILSQYIPQKIKSRGVDRFAVIVTIGIAWGFAEILTAAGAYNKRPLSTQFSCRTDRSGLITAAPWIRVPYPFQWGSPTFNVGDIFAMIAASLVAIVESTGTFIAASRFGGATHMPPSVLSRGVGWLGIGTLLDALFGAATGSTASVYIFQNAGLLGLTRVGSRRVIQISAGFMLFFSIFGKFGAVIAAIPLPIIAAVYCVLFAYVASAGLGFLQFCNLNSYRSMFIVGFSLFIGLSVPQYFLEYLTLSGHGPAHTGSTSFNNIVQVIFSSAATVAIIVAYFLDATMSREHASTHRDSGRHWWEKFRTFNQDIRSDEFYGLPMNLNRFFPSA*