AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0321620


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0321620 MtrunA17_Chr2g0298801 96.729 1009 30 3 1 1006 1 1009 0.0 2011
Msa0321620 MtrunA17_Chr4g0071701 52.433 637 213 20 397 1006 247 820 0.0 550
Msa0321620 MtrunA17_Chr4g0071701 62.097 248 54 8 1 212 1 244 3.10e-67 241
Msa0321620 MtrunA17_Chr4g0073021 30.527 1081 551 40 1 964 1 998 2.62e-113 374
Msa0321620 MtrunA17_Chr1g0197121 40.996 522 249 16 1 495 1 490 1.18e-104 346
Msa0321620 MtrunA17_Chr1g0177421 40.927 518 234 16 1 491 1 473 1.05e-100 335
Msa0321620 MtrunA17_Chr5g0430201 25.973 1028 529 41 1 863 1 961 6.88e-43 170
Msa0321620 MtrunA17_Chr3g0105051 30.309 551 286 22 1 498 1 506 2.37e-34 142
Msa0321620 MtrunA17_Chr3g0113631 32.854 417 219 14 1 397 1 376 8.86e-34 140
Msa0321620 MtrunA17_Chr4g0061371 30.078 256 144 9 26 280 20 241 1.49e-17 88.2
Msa0321620 MtrunA17_Chr7g0225161 29.388 245 138 8 26 269 20 230 6.03e-16 83.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0321620 AT4G29920.2 42.332 1089 466 39 1 1000 1 1016 0.0 664
Msa0321620 AT4G29920.1 42.149 1089 465 39 1 1000 1 1013 0.0 658
Msa0321620 AT5G57130.1 41.547 1112 456 47 1 1003 1 1027 0.0 634
Msa0321620 AT5G57710.1 33.131 824 424 30 1 758 1 763 8.24e-101 340
Msa0321620 AT4G30350.1 37.197 578 285 17 1 536 1 542 1.04e-79 280
Msa0321620 AT2G29970.1 27.040 1054 585 45 1 962 1 962 4.12e-54 205
Msa0321620 AT1G07200.2 27.408 872 451 36 1 779 1 783 6.70e-47 182
Msa0321620 AT2G40130.1 31.655 417 232 16 1 397 1 384 1.71e-40 162
Msa0321620 AT2G40130.2 31.655 417 232 16 1 397 1 384 2.12e-40 162
Msa0321620 AT1G74310.1 26.953 256 152 9 26 280 20 241 6.42e-15 80.1
Msa0321620 AT1G74310.2 26.953 256 152 9 26 280 20 241 9.58e-15 79.3

Find 158 sgRNAs with CRISPR-Local

Find 250 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAAATTGTTAACTACTTAA+TGG 0.116030 2_4:+23092672 Msa0321620:CDS
ATAATTCATCATACCCTTAT+TGG 0.138198 2_4:+23091228 Msa0321620:CDS
AAAATGGGATAGTGGGTTTA+TGG 0.183846 2_4:+23092627 Msa0321620:CDS
CTTGTCAAATCACTTGAAAT+TGG 0.210696 2_4:-23092274 None:intergenic
TCATCAAAATCACCTTATTT+AGG 0.220436 2_4:+23092067 Msa0321620:CDS
CAATGAAAAGTTTGTTGTTT+TGG 0.224683 2_4:+23091826 Msa0321620:CDS
GATATTGAACTTGGTGTATC+TGG 0.233918 2_4:-23091275 None:intergenic
AGCACACTCCTTTGATGATT+TGG 0.236617 2_4:-23091636 None:intergenic
CCATTAAGTAGTTAACAATT+TGG 0.247388 2_4:-23092672 None:intergenic
GTACCTTGGTTTGGCCAATA+AGG 0.279458 2_4:-23091242 None:intergenic
TAAGGGTATGATGAATTATA+AGG 0.279485 2_4:-23091224 None:intergenic
ATTGCAAAGTTTGGAACTTT+AGG 0.282514 2_4:+23091908 Msa0321620:CDS
ACAAGTTTAGAGAGGGTTAA+TGG 0.285676 2_4:+23092550 Msa0321620:CDS
TTCTTTGAAGTATATGAAAA+AGG 0.292144 2_4:+23089222 Msa0321620:CDS
CTTGGAATTGGATTCTCTTA+AGG 0.294768 2_4:+23091430 Msa0321620:CDS
CCTGTTCCATCTGGTGGACT+TGG 0.302111 2_4:+23089544 Msa0321620:CDS
AGAAGAGTCTGTTGCCTTCA+TGG 0.304411 2_4:+23090718 Msa0321620:CDS
TATAGTTTATACACTTTGTT+GGG 0.306813 2_4:+23092588 Msa0321620:CDS
TTGGAATTGGATTCTCTTAA+GGG 0.308860 2_4:+23091431 Msa0321620:CDS
AAAATCTTCTGAGTCTAATA+AGG 0.315204 2_4:+23089015 Msa0321620:CDS
GATTATGTTGTGGAAGAAAT+AGG 0.322451 2_4:+23089391 Msa0321620:CDS
CCAAGGATTGAAGAAAATAA+AGG 0.323678 2_4:+23092136 Msa0321620:CDS
GTCATTTCCTTGTTCTTAGC+TGG 0.323821 2_4:-23092373 None:intergenic
AGTAACAACAACCTTGGAAT+TGG 0.329743 2_4:+23091418 Msa0321620:CDS
GGAACAAGAATGGTAAGATT+TGG 0.338899 2_4:+23089434 Msa0321620:CDS
GTTAGTGATTATGTTGCATT+AGG 0.341264 2_4:+23089286 Msa0321620:CDS
ATGTTTGAGAAATGGCTAAA+AGG 0.352149 2_4:+23092517 Msa0321620:CDS
GATAAGGTGATAGAGGAAAT+TGG 0.356476 2_4:+23092466 Msa0321620:CDS
CTAACAACATGTTTGAGAAA+TGG 0.359340 2_4:+23092509 Msa0321620:CDS
AGTAGAGTTATGAGAGAAGC+TGG 0.362568 2_4:+23088818 Msa0321620:CDS
AAATGGGATAGTGGGTTTAT+GGG 0.369377 2_4:+23092628 Msa0321620:CDS
TTGGTTGAAAATGCTGATTT+TGG 0.372782 2_4:+23091845 Msa0321620:CDS
AGATGTAAAATGCAAGTAAT+AGG 0.372867 2_4:+23092737 Msa0321620:three_prime_UTR
GAATTTGAGATTGCAAAGTT+TGG 0.378824 2_4:+23091899 Msa0321620:CDS
CAAGCTGTTCCTGTTCCATC+TGG 0.386300 2_4:+23089535 Msa0321620:CDS
ATTCCAAGGTTGTTGTTACT+TGG 0.386999 2_4:-23091415 None:intergenic
GTTTGAACTATAAGCTGGTT+TGG 0.387155 2_4:-23091315 None:intergenic
GCAATTGCAGAATCAGTGTT+TGG 0.389107 2_4:+23091713 Msa0321620:CDS
TACCTTGGTTTGGCCAATAA+GGG 0.405032 2_4:-23091241 None:intergenic
CGCGACGGAACCGAGGTATA+AGG 0.416162 2_4:-23091337 None:intergenic
ATCATTGAAGTTGAACTCAA+TGG 0.420697 2_4:-23091375 None:intergenic
TGCAAGGAAATGATTCTGTT+GGG 0.420831 2_4:+23091672 Msa0321620:CDS
GGAAAGTTGTTTGGTGAAGA+AGG 0.427180 2_4:+23089412 Msa0321620:CDS
TCATATATACAAAGTGTTGC+AGG 0.428362 2_4:+23091556 Msa0321620:CDS
AACTGTGATTGTTGCTCCAA+TGG 0.429174 2_4:-23091184 None:intergenic
GTGGTAAAGAGGATAGAAAA+TGG 0.429390 2_4:+23092611 Msa0321620:CDS
GGCAACAGACTCTTCTGGTC+TGG 0.429543 2_4:-23090711 None:intergenic
ATTGATCATATCACTGACTT+TGG 0.429568 2_4:+23092695 Msa0321620:exon
CACCATTGATTCTCAAAAGT+TGG 0.432170 2_4:-23089508 None:intergenic
TAGTTCAATAGCAGAAGCTT+TGG 0.437063 2_4:+23091607 Msa0321620:CDS
CAAGGATTGAAGAAAATAAA+GGG 0.440205 2_4:+23092137 Msa0321620:CDS
TCTTTAACTGAAGGACTAGT+TGG 0.442649 2_4:+23089112 Msa0321620:CDS
TGGAGATTTGAAGTGGATAG+TGG 0.446714 2_4:+23089330 Msa0321620:CDS
GAAGGATTCAGTGATGAAGT+TGG 0.452059 2_4:+23091985 Msa0321620:CDS
GAGGATAGAAAATGGGATAG+TGG 0.454439 2_4:+23092619 Msa0321620:CDS
GTATAGTTTATACACTTTGT+TGG 0.454781 2_4:+23092587 Msa0321620:CDS
CAAATTCTCAATTGAGTCTA+GGG 0.457600 2_4:-23092332 None:intergenic
ATTGGATTCTCTTAAGGGTA+TGG 0.458957 2_4:+23091436 Msa0321620:CDS
GTGATAGAGGAAATTGGTGT+AGG 0.463249 2_4:+23092472 Msa0321620:CDS
CACTGACTTTGGTTAGTAGT+GGG 0.465490 2_4:+23092706 Msa0321620:three_prime_UTR
TTGCAAGGAAATGATTCTGT+TGG 0.465938 2_4:+23091671 Msa0321620:CDS
TGTACAAGATAAGGTGATAG+AGG 0.466717 2_4:+23092459 Msa0321620:CDS
ATTGACAATACTGCCACCAT+TGG 0.472037 2_4:-23091951 None:intergenic
AAAATTTAGTGTACAAGATA+AGG 0.472610 2_4:+23092450 Msa0321620:CDS
AAGATACTAGTACCTTGGTT+TGG 0.472726 2_4:-23091251 None:intergenic
ACAAATTCTCAATTGAGTCT+AGG 0.473106 2_4:-23092333 None:intergenic
GATGGTGATAACTCAAAAGT+TGG 0.473844 2_4:-23092037 None:intergenic
GTGGTTGCTGCTGTTGCTGT+TGG 0.474742 2_4:-23088733 None:intergenic
TCAAAACCCATCTCCTATGC+TGG 0.480572 2_4:+23090593 Msa0321620:CDS
AACAGAAGGGTCATCAAGAA+TGG 0.480936 2_4:-23088795 None:intergenic
AAGGGTATGATGAATTATAA+GGG 0.483177 2_4:-23091223 None:intergenic
ATAAGGTTTGAACTATAAGC+TGG 0.485992 2_4:-23091320 None:intergenic
AAAGGTGAAGTAGTTGTAGT+TGG 0.486118 2_4:-23088614 None:intergenic
GCTGTTCCTGTTCCATCTGG+TGG 0.490790 2_4:+23089538 Msa0321620:CDS
GAGCTCAAGCTCATCAAAGA+AGG 0.494543 2_4:+23088693 Msa0321620:CDS
GTTTGAGTCTTCATTCATCA+AGG 0.497632 2_4:+23089566 Msa0321620:CDS
AGGATAGAAAATGGGATAGT+GGG 0.497966 2_4:+23092620 Msa0321620:CDS
CTGGCAAGATACTAGTACCT+TGG 0.498023 2_4:-23091256 None:intergenic
CATCAAAGGAGTGTGCTACT+TGG 0.499695 2_4:+23091642 Msa0321620:CDS
GATTTGACAAGAGAAACATT+AGG 0.500539 2_4:+23092286 Msa0321620:CDS
ATGTTATAAGAGTGTTGAAA+AGG 0.504959 2_4:+23089260 Msa0321620:CDS
GAAAGTTGTTTGGTGAAGAA+GGG 0.506532 2_4:+23089413 Msa0321620:CDS
TCAACTTTAACACTCAAAAG+TGG 0.507140 2_4:-23088752 None:intergenic
ATTAGAAGTTACACAAAAGA+AGG 0.509570 2_4:-23092762 None:intergenic
CCAAGTCCACCAGATGGAAC+AGG 0.510866 2_4:-23089544 None:intergenic
TCAATCTTGAAGCACTCTCT+AGG 0.512470 2_4:+23088416 Msa0321620:CDS
ATGAAGGCAACAGACTCTTC+TGG 0.516310 2_4:-23090716 None:intergenic
TGGTAAAGAGGATAGAAAAT+GGG 0.517397 2_4:+23092612 Msa0321620:CDS
TCACTGACTTTGGTTAGTAG+TGG 0.518331 2_4:+23092705 Msa0321620:three_prime_UTR
TTGATTCCAGCATAGGAGAT+GGG 0.522179 2_4:-23090599 None:intergenic
ACTTTGTTGGGGTGGTAAAG+AGG 0.524368 2_4:+23092600 Msa0321620:CDS
GAGGAAATTGGTGTAGGGTG+TGG 0.525237 2_4:+23092478 Msa0321620:CDS
AGAAGATGAAGACTATGATG+AGG 0.527194 2_4:+23092240 Msa0321620:CDS
GATACAGTTTCTTTAACTGA+AGG 0.527453 2_4:+23089103 Msa0321620:CDS
CTGACTTTGGTTAGTAGTGG+GGG 0.527571 2_4:+23092708 Msa0321620:three_prime_UTR
ATAGTTCAAACCTTATACCT+CGG 0.527851 2_4:+23091327 Msa0321620:CDS
TTTGATTCCAGCATAGGAGA+TGG 0.528413 2_4:-23090600 None:intergenic
GTTACATGAGGTGTCAAATG+AGG 0.528631 2_4:+23089482 Msa0321620:CDS
TGGATAGTGGATGATAATGA+TGG 0.530923 2_4:+23089343 Msa0321620:CDS
GCATTTCTTAAAGAAGAAGA+TGG 0.533196 2_4:-23088506 None:intergenic
AAGAAGAACACTGTGATAGT+TGG 0.533806 2_4:+23089079 Msa0321620:CDS
GAAGATGAAGACTATGATGA+GGG 0.534488 2_4:+23092241 Msa0321620:CDS
GAAGAAATAGGAAAGTTGTT+TGG 0.534540 2_4:+23089403 Msa0321620:CDS
CTTGGAAATTCAACATTCAG+TGG 0.534821 2_4:+23091491 Msa0321620:CDS
GACAAAGATGTTTATGTCAA+GGG 0.535057 2_4:+23092393 Msa0321620:CDS
GTTTATACACTTTGTTGGGG+TGG 0.536531 2_4:+23092592 Msa0321620:CDS
GTTTAGAGAGGGTTAATGGT+GGG 0.538900 2_4:+23092554 Msa0321620:CDS
TGACAAAGATGTTTATGTCA+AGG 0.539341 2_4:+23092392 Msa0321620:CDS
GATTATGTTGCATTAGGTGT+TGG 0.539481 2_4:+23089292 Msa0321620:CDS
GGTGAAGAAGGGAACAAGAA+TGG 0.542309 2_4:+23089424 Msa0321620:CDS
GGTTGATTCCAAATCATCAA+AGG 0.544126 2_4:+23091628 Msa0321620:CDS
AGCTCAAGCTCATCAAAGAA+GGG 0.544619 2_4:+23088694 Msa0321620:CDS
CTCATAACTCTACTAACAGA+AGG 0.547154 2_4:-23088809 None:intergenic
TAGCAAATTGTAATGCGCTC+AGG 0.548048 2_4:+23088353 None:intergenic
ATAATGAAAAGATTTGAAAG+AGG 0.551174 2_4:+23089139 Msa0321620:CDS
GTAAAGACAACTCTTGCACT+TGG 0.555155 2_4:+23091473 Msa0321620:CDS
TCAACAAAAGATATTGAACT+TGG 0.555816 2_4:-23091284 None:intergenic
AAACCAAGTAACAACAACCT+TGG 0.559847 2_4:+23091412 Msa0321620:CDS
CTTAAGAGAATCCAATTCCA+AGG 0.560395 2_4:-23091429 None:intergenic
GATTCTCTTAAGGGTATGGA+AGG 0.560727 2_4:+23091440 Msa0321620:CDS
TTAGAGAGGGTTAATGGTGG+GGG 0.564593 2_4:+23092556 Msa0321620:CDS
ACTGACTTTGGTTAGTAGTG+GGG 0.567654 2_4:+23092707 Msa0321620:three_prime_UTR
CTAACTGTTTCACATTGCCA+TGG 0.568665 2_4:-23091587 None:intergenic
TGATAGAGGAAATTGGTGTA+GGG 0.570147 2_4:+23092473 Msa0321620:CDS
CTTCAAGATTGAAGCAGCCT+CGG 0.571682 2_4:-23088405 None:intergenic
AGTGTAGCAGCAACGTGAAG+AGG 0.575327 2_4:-23088473 None:intergenic
TAGCACAGAAGCACGTCAGA+AGG 0.576747 2_4:+23090752 Msa0321620:CDS
ACATGCTGAGGTTGAAGCAA+AGG 0.577281 2_4:-23088632 None:intergenic
TTTAGAGAGGGTTAATGGTG+GGG 0.579670 2_4:+23092555 Msa0321620:CDS
TGTCAATGAAGATCAGAAGA+AGG 0.579932 2_4:+23091967 Msa0321620:CDS
AAAATATTCATATTGTCCAA+TGG 0.583934 2_4:+23091935 Msa0321620:CDS
TCTATGTTGGAGATTTGAAG+TGG 0.587362 2_4:+23089323 Msa0321620:CDS
ATAGTTTATACACTTTGTTG+GGG 0.593962 2_4:+23092589 Msa0321620:CDS
GGTAAAAGAGTCATTTGAGG+AGG 0.594837 2_4:+23092414 Msa0321620:CDS
TCAAGAGCTCTACATTGAAG+AGG 0.598089 2_4:-23088560 None:intergenic
CTATGAGACTGAAGCCATGA+AGG 0.600566 2_4:-23090732 None:intergenic
TTACATGAGGTGTCAAATGA+GGG 0.606608 2_4:+23089483 Msa0321620:CDS
AGAGATTGTTGATTATGTTG+TGG 0.609416 2_4:+23089381 Msa0321620:CDS
AGTTTAGAGAGGGTTAATGG+TGG 0.613323 2_4:+23092553 Msa0321620:CDS
CTAGGCTTAGCACGTAGAAG+AGG 0.615440 2_4:+23088434 Msa0321620:CDS
CTCAAACCAAGTCCACCAGA+TGG 0.615673 2_4:-23089550 None:intergenic
GAAAGTGAAGGAACATGCTG+AGG 0.620831 2_4:-23088644 None:intergenic
AAGGGTAAAAGAGTCATTTG+AGG 0.622133 2_4:+23092411 Msa0321620:CDS
GCTCAAGCTCATCAAAGAAG+GGG 0.624859 2_4:+23088695 Msa0321620:CDS
TCAAAGTCCAGCTAAGAACA+AGG 0.627959 2_4:+23092366 Msa0321620:CDS
TGTTGTCCGCGACGGAACCG+AGG 0.638050 2_4:-23091344 None:intergenic
AAATGGTTATGACTAAGAGA+AGG 0.639749 2_4:-23088917 None:intergenic
ATATTCATATTGTCCAATGG+TGG 0.641525 2_4:+23091938 Msa0321620:CDS
TCATAACTCTACTAACAGAA+GGG 0.643236 2_4:-23088808 None:intergenic
GAAGAGGTGTGATTTGTGCA+TGG 0.654069 2_4:-23088457 None:intergenic
TACCCTTATTGGCCAAACCA+AGG 0.654565 2_4:+23091239 Msa0321620:CDS
TGTTGCAGGAGAATGTTCCA+TGG 0.660728 2_4:+23091570 Msa0321620:CDS
CTCAAGCTCATCAAAGAAGG+GGG 0.661271 2_4:+23088696 Msa0321620:CDS
CTAGTTATCAAAGTTACATG+AGG 0.668274 2_4:+23089470 Msa0321620:CDS
TGCATGATTGTTGTCCGCGA+CGG 0.675917 2_4:-23091352 None:intergenic
ATGAGCGCATTAGAAAGTGA+AGG 0.676982 2_4:-23088656 None:intergenic
CTTATACCTCGGTTCCGTCG+CGG 0.679756 2_4:+23091338 Msa0321620:CDS
GCAAGAGACACTAACAGCCG+AGG 0.683106 2_4:+23088388 Msa0321620:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATAATTTTTATTTTAAATA+TGG + chr2_4:23090001-23090020 Msa0321620:intron 0.0%
!! TAAAAAAAATACAAAAAAGA+GGG + chr2_4:23089931-23089950 Msa0321620:intron 10.0%
!! CTAAAAAAAATACAAAAAAG+AGG + chr2_4:23089930-23089949 Msa0321620:intron 15.0%
!! CAATAATACACAAAATATAT+CGG - chr2_4:23090478-23090497 None:intergenic 15.0%
!!! AGTGTTTATTTGTTTAATTT+TGG + chr2_4:23090511-23090530 Msa0321620:intron 15.0%
!!! TTAACAATTTGGATATTTTT+AGG - chr2_4:23092664-23092683 None:intergenic 15.0%
!! ATAATGAAAAGATTTGAAAG+AGG + chr2_4:23089139-23089158 Msa0321620:CDS 20.0%
!!! TTCTTTGAAGTATATGAAAA+AGG + chr2_4:23089222-23089241 Msa0321620:CDS 20.0%
!!! TGTTTTTTTAGTTTGAACTT+AGG + chr2_4:23089698-23089717 Msa0321620:intron 20.0%
!! GTCTTTCATTAGTAAATTTA+TGG - chr2_4:23089750-23089769 None:intergenic 20.0%
!!! TTTTGTAATTTTGATACAGT+CGG + chr2_4:23089881-23089900 Msa0321620:intron 20.0%
!! AAAATAAGTGTTTATGTGAA+AGG + chr2_4:23090054-23090073 Msa0321620:intron 20.0%
!!! TTACTTTATGATATTGCTTT+TGG - chr2_4:23090284-23090303 None:intergenic 20.0%
!!! CGATATATTTTGTGTATTAT+TGG + chr2_4:23090476-23090495 Msa0321620:intron 20.0%
!! ATGATTAAAATGTTTCAACT+AGG - chr2_4:23090961-23090980 None:intergenic 20.0%
!! ATCATTAGATCAAAATTAGA+CGG + chr2_4:23090976-23090995 Msa0321620:intron 20.0%
!!! ATCTTATGTGATTTTTTACT+TGG + chr2_4:23091041-23091060 Msa0321620:intron 20.0%
!!! AACTTTTCATTGTTTTTCAA+TGG - chr2_4:23091818-23091837 None:intergenic 20.0%
!!! TGGACAATATGAATATTTTT+TGG - chr2_4:23091934-23091953 None:intergenic 20.0%
!! AAAATATTCATATTGTCCAA+TGG + chr2_4:23091935-23091954 Msa0321620:CDS 20.0%
!!! CTTCTTTTATTACCTAAATA+AGG - chr2_4:23092082-23092101 None:intergenic 20.0%
!! AAAATTTAGTGTACAAGATA+AGG + chr2_4:23092450-23092469 Msa0321620:CDS 20.0%
!! TATAGTTTATACACTTTGTT+GGG + chr2_4:23092588-23092607 Msa0321620:CDS 20.0%
! TCCTTCTGTTAAAAACAATT+TGG + chr2_4:23088850-23088869 Msa0321620:CDS 25.0%
!!! TCCAAATTGTTTTTAACAGA+AGG - chr2_4:23088854-23088873 None:intergenic 25.0%
!!! AACCATTTTTTGAGTTCTTA+TGG + chr2_4:23088932-23088951 Msa0321620:CDS 25.0%
! AACCATAAGAACTCAAAAAA+TGG - chr2_4:23088937-23088956 None:intergenic 25.0%
!!! TTTTTGAGTTCTTATGGTTA+TGG + chr2_4:23088938-23088957 Msa0321620:CDS 25.0%
! AAAATCTTCTGAGTCTAATA+AGG + chr2_4:23089015-23089034 Msa0321620:CDS 25.0%
!!! ATGTTATAAGAGTGTTGAAA+AGG + chr2_4:23089260-23089279 Msa0321620:CDS 25.0%
!! TTAGAATAAACAGTCCTTTT+TGG + chr2_4:23089627-23089646 Msa0321620:intron 25.0%
!! TCTATGTGTATTTTGTTACT+TGG + chr2_4:23089658-23089677 Msa0321620:intron 25.0%
! ATGTCTTCAGTTAATCATTT+CGG + chr2_4:23089723-23089742 Msa0321620:intron 25.0%
! TTACTAACAAAACACGTTTA+AGG + chr2_4:23089854-23089873 Msa0321620:intron 25.0%
!!! AATTTGTTGCTAAGTATGTA+CGG + chr2_4:23090091-23090110 Msa0321620:intron 25.0%
!!! GTTTAATTTTGGATGCTAAT+TGG + chr2_4:23090522-23090541 Msa0321620:intron 25.0%
!!! ATCAAAGTTTTTCAGTAACA+AGG + chr2_4:23090617-23090636 Msa0321620:CDS 25.0%
!!! TTGAGCTTCTTTTTCATAAT+TGG - chr2_4:23090682-23090701 None:intergenic 25.0%
! TTTGTATTCTTGTACAAGTT+GGG - chr2_4:23090799-23090818 None:intergenic 25.0%
!! TTTTGTATTCTTGTACAAGT+TGG - chr2_4:23090800-23090819 None:intergenic 25.0%
! ACTAGGATACGATAAATATA+TGG - chr2_4:23090944-23090963 None:intergenic 25.0%
!! TTGGTGTATGTTTGAAATAA+TGG + chr2_4:23091060-23091079 Msa0321620:intron 25.0%
!!! GAACAATTCAATGTTTTTTC+AGG + chr2_4:23091088-23091107 Msa0321620:intron 25.0%
!! AAGGGTATGATGAATTATAA+GGG - chr2_4:23091226-23091245 None:intergenic 25.0%
!! TAAGGGTATGATGAATTATA+AGG - chr2_4:23091227-23091246 None:intergenic 25.0%
! ATAATTCATCATACCCTTAT+TGG + chr2_4:23091228-23091247 Msa0321620:CDS 25.0%
! TCAACAAAAGATATTGAACT+TGG - chr2_4:23091287-23091306 None:intergenic 25.0%
!!! CAATGAAAAGTTTGTTGTTT+TGG + chr2_4:23091826-23091845 Msa0321620:CDS 25.0%
!! TCATCAAAATCACCTTATTT+AGG + chr2_4:23092067-23092086 Msa0321620:CDS 25.0%
! CAAGGATTGAAGAAAATAAA+GGG + chr2_4:23092137-23092156 Msa0321620:CDS 25.0%
!!! TTTTTCAAACAAGTTTAGAG+AGG + chr2_4:23092542-23092561 Msa0321620:CDS 25.0%
!! TTTTCAAACAAGTTTAGAGA+GGG + chr2_4:23092543-23092562 Msa0321620:CDS 25.0%
! GTATAGTTTATACACTTTGT+TGG + chr2_4:23092587-23092606 Msa0321620:CDS 25.0%
! ATAGTTTATACACTTTGTTG+GGG + chr2_4:23092589-23092608 Msa0321620:CDS 25.0%
! CCATTAAGTAGTTAACAATT+TGG - chr2_4:23092675-23092694 None:intergenic 25.0%
! CCAAATTGTTAACTACTTAA+TGG + chr2_4:23092672-23092691 Msa0321620:CDS 25.0%
! AGATGTAAAATGCAAGTAAT+AGG + chr2_4:23092737-23092756 Msa0321620:three_prime_UTR 25.0%
GCATTTCTTAAAGAAGAAGA+TGG - chr2_4:23088509-23088528 None:intergenic 30.0%
TCAACTTTAACACTCAAAAG+TGG - chr2_4:23088755-23088774 None:intergenic 30.0%
TCATAACTCTACTAACAGAA+GGG - chr2_4:23088811-23088830 None:intergenic 30.0%
AAATGGTTATGACTAAGAGA+AGG - chr2_4:23088920-23088939 None:intergenic 30.0%
!! GACTCAGAAGATTTTAAGAA+AGG - chr2_4:23089010-23089029 None:intergenic 30.0%
GATACAGTTTCTTTAACTGA+AGG + chr2_4:23089103-23089122 Msa0321620:CDS 30.0%
!!! TGAGTTTTTTTCATCTCATC+AGG - chr2_4:23089172-23089191 None:intergenic 30.0%
! ACTCATTTTGTGAAGTTTCA+TGG + chr2_4:23089187-23089206 Msa0321620:CDS 30.0%
GTTAGTGATTATGTTGCATT+AGG + chr2_4:23089286-23089305 Msa0321620:CDS 30.0%
! AGAGATTGTTGATTATGTTG+TGG + chr2_4:23089381-23089400 Msa0321620:CDS 30.0%
GATTATGTTGTGGAAGAAAT+AGG + chr2_4:23089391-23089410 Msa0321620:CDS 30.0%
GAAGAAATAGGAAAGTTGTT+TGG + chr2_4:23089403-23089422 Msa0321620:CDS 30.0%
CTAGTTATCAAAGTTACATG+AGG + chr2_4:23089470-23089489 Msa0321620:CDS 30.0%
!! TACCAACTTTTGAGAATCAA+TGG + chr2_4:23089506-23089525 Msa0321620:CDS 30.0%
! CATAGACTAAAGTACCAAAA+AGG - chr2_4:23089644-23089663 None:intergenic 30.0%
!! GTGTATTTTGTTACTTGGTT+TGG + chr2_4:23089663-23089682 Msa0321620:intron 30.0%
AATTGTTGTCAATTGTCGTA+TGG - chr2_4:23089813-23089832 None:intergenic 30.0%
CAAAACCTCTTTAGACATTA+CGG + chr2_4:23090222-23090241 Msa0321620:intron 30.0%
! TTCACATGATGTTTTGTACA+AGG + chr2_4:23090246-23090265 Msa0321620:intron 30.0%
TATTCAAGAGAATGAAACCT+TGG - chr2_4:23090344-23090363 None:intergenic 30.0%
AAAAACTTTGATTCCAGCAT+AGG - chr2_4:23090609-23090628 None:intergenic 30.0%
!! AAAGTTTTTCAGTAACAAGG+AGG + chr2_4:23090620-23090639 Msa0321620:CDS 30.0%
!! AGCTTCTTTTTCATAATTGG+AGG - chr2_4:23090679-23090698 None:intergenic 30.0%
ACAAAAAACCTCAAAACCAT+TGG + chr2_4:23091168-23091187 Msa0321620:CDS 30.0%
ATAAGGTTTGAACTATAAGC+TGG - chr2_4:23091323-23091342 None:intergenic 30.0%
ATAGTTCAAACCTTATACCT+CGG + chr2_4:23091327-23091346 Msa0321620:CDS 30.0%
ATCATTGAAGTTGAACTCAA+TGG - chr2_4:23091378-23091397 None:intergenic 30.0%
TTGGAATTGGATTCTCTTAA+GGG + chr2_4:23091431-23091450 Msa0321620:CDS 30.0%
!! TCATATATACAAAGTGTTGC+AGG + chr2_4:23091556-23091575 Msa0321620:CDS 30.0%
ATGATTCTGTTGGGAAAAAA+AGG + chr2_4:23091681-23091700 Msa0321620:CDS 30.0%
! AGTTGAAATGTTTTCTCAGA+TGG + chr2_4:23091739-23091758 Msa0321620:CDS 30.0%
!!! TTGGTTGAAAATGCTGATTT+TGG + chr2_4:23091845-23091864 Msa0321620:CDS 30.0%
! AGCAAGCATTTTCCTTAAAA+GGG - chr2_4:23091876-23091895 None:intergenic 30.0%
! GAATTTGAGATTGCAAAGTT+TGG + chr2_4:23091899-23091918 Msa0321620:CDS 30.0%
! ATTGCAAAGTTTGGAACTTT+AGG + chr2_4:23091908-23091927 Msa0321620:CDS 30.0%
ATATTCATATTGTCCAATGG+TGG + chr2_4:23091938-23091957 Msa0321620:CDS 30.0%
!!! GATTTTGATGATGATGAAGA+TGG - chr2_4:23092058-23092077 None:intergenic 30.0%
TTAGCAAGATAAAAACTCCA+AGG + chr2_4:23092119-23092138 Msa0321620:CDS 30.0%
!!! CCTTTATTTTCTTCAATCCT+TGG - chr2_4:23092139-23092158 None:intergenic 30.0%
CCAAGGATTGAAGAAAATAA+AGG + chr2_4:23092136-23092155 Msa0321620:CDS 30.0%
CTTGTCAAATCACTTGAAAT+TGG - chr2_4:23092277-23092296 None:intergenic 30.0%
GATTTGACAAGAGAAACATT+AGG + chr2_4:23092286-23092305 Msa0321620:CDS 30.0%
CAAATTCTCAATTGAGTCTA+GGG - chr2_4:23092335-23092354 None:intergenic 30.0%
ACAAATTCTCAATTGAGTCT+AGG - chr2_4:23092336-23092355 None:intergenic 30.0%
TGACAAAGATGTTTATGTCA+AGG + chr2_4:23092392-23092411 Msa0321620:CDS 30.0%
GACAAAGATGTTTATGTCAA+GGG + chr2_4:23092393-23092412 Msa0321620:CDS 30.0%
CTAACAACATGTTTGAGAAA+TGG + chr2_4:23092509-23092528 Msa0321620:CDS 30.0%
ATGTTTGAGAAATGGCTAAA+AGG + chr2_4:23092517-23092536 Msa0321620:CDS 30.0%
TGGTAAAGAGGATAGAAAAT+GGG + chr2_4:23092612-23092631 Msa0321620:CDS 30.0%
!! ATTGATCATATCACTGACTT+TGG + chr2_4:23092695-23092714 Msa0321620:exon 30.0%
AAAGGTGAAGTAGTTGTAGT+TGG - chr2_4:23088617-23088636 None:intergenic 35.0%
CTCATAACTCTACTAACAGA+AGG - chr2_4:23088812-23088831 None:intergenic 35.0%
AAGAAGAACACTGTGATAGT+TGG + chr2_4:23089079-23089098 Msa0321620:CDS 35.0%
! TCTTTAACTGAAGGACTAGT+TGG + chr2_4:23089112-23089131 Msa0321620:CDS 35.0%
GATTATGTTGCATTAGGTGT+TGG + chr2_4:23089292-23089311 Msa0321620:CDS 35.0%
!! GTTGGAGCTATTTTCTATGT+TGG + chr2_4:23089310-23089329 Msa0321620:CDS 35.0%
TCTATGTTGGAGATTTGAAG+TGG + chr2_4:23089323-23089342 Msa0321620:CDS 35.0%
!! TGGATAGTGGATGATAATGA+TGG + chr2_4:23089343-23089362 Msa0321620:CDS 35.0%
! GAAAGTTGTTTGGTGAAGAA+GGG + chr2_4:23089413-23089432 Msa0321620:CDS 35.0%
GGAACAAGAATGGTAAGATT+TGG + chr2_4:23089434-23089453 Msa0321620:CDS 35.0%
! TTACATGAGGTGTCAAATGA+GGG + chr2_4:23089483-23089502 Msa0321620:CDS 35.0%
!! CACCATTGATTCTCAAAAGT+TGG - chr2_4:23089511-23089530 None:intergenic 35.0%
GTTTGAGTCTTCATTCATCA+AGG + chr2_4:23089566-23089585 Msa0321620:CDS 35.0%
!! AAAAGCATTGTTGGTTGGTA+AGG + chr2_4:23090145-23090164 Msa0321620:intron 35.0%
CAAAACAAAGTGAAGCAGAA+AGG - chr2_4:23090192-23090211 None:intergenic 35.0%
TGAATCCGTAATGTCTAAAG+AGG - chr2_4:23090230-23090249 None:intergenic 35.0%
GCTAATATGTTCTATCTCCA+AGG + chr2_4:23090324-23090343 Msa0321620:intron 35.0%
!! ACTGTTGATTTGAGATCAAC+CGG + chr2_4:23090857-23090876 Msa0321620:intron 35.0%
ACGCATTAATTAACCTAGAC+CGG - chr2_4:23090879-23090898 None:intergenic 35.0%
!!! GTTCCACTTTTTGTTCAACT+GGG - chr2_4:23091123-23091142 None:intergenic 35.0%
!!! TGTTCCACTTTTTGTTCAAC+TGG - chr2_4:23091124-23091143 None:intergenic 35.0%
!!! TTTGAGGTTTTTTGTTCAGG+TGG - chr2_4:23091163-23091182 None:intergenic 35.0%
!!! GGTTTTGAGGTTTTTTGTTC+AGG - chr2_4:23091166-23091185 None:intergenic 35.0%
AAGATACTAGTACCTTGGTT+TGG - chr2_4:23091254-23091273 None:intergenic 35.0%
!! GATATTGAACTTGGTGTATC+TGG - chr2_4:23091278-23091297 None:intergenic 35.0%
GTTTGAACTATAAGCTGGTT+TGG - chr2_4:23091318-23091337 None:intergenic 35.0%
AAACCAAGTAACAACAACCT+TGG + chr2_4:23091412-23091431 Msa0321620:CDS 35.0%
! ATTCCAAGGTTGTTGTTACT+TGG - chr2_4:23091418-23091437 None:intergenic 35.0%
AGTAACAACAACCTTGGAAT+TGG + chr2_4:23091418-23091437 Msa0321620:CDS 35.0%
CTTAAGAGAATCCAATTCCA+AGG - chr2_4:23091432-23091451 None:intergenic 35.0%
CTTGGAATTGGATTCTCTTA+AGG + chr2_4:23091430-23091449 Msa0321620:CDS 35.0%
ATTGGATTCTCTTAAGGGTA+TGG + chr2_4:23091436-23091455 Msa0321620:CDS 35.0%
CTTGGAAATTCAACATTCAG+TGG + chr2_4:23091491-23091510 Msa0321620:CDS 35.0%
TGGTTCAGATCAGAAAAAGA+TGG + chr2_4:23091511-23091530 Msa0321620:CDS 35.0%
TAGTTCAATAGCAGAAGCTT+TGG + chr2_4:23091607-23091626 Msa0321620:CDS 35.0%
! GGTTGATTCCAAATCATCAA+AGG + chr2_4:23091628-23091647 Msa0321620:CDS 35.0%
TTGCAAGGAAATGATTCTGT+TGG + chr2_4:23091671-23091690 Msa0321620:CDS 35.0%
TGCAAGGAAATGATTCTGTT+GGG + chr2_4:23091672-23091691 Msa0321620:CDS 35.0%
TTCTGTTGGGAAAAAAAGGT+TGG + chr2_4:23091685-23091704 Msa0321620:CDS 35.0%
! CCAACAACCTTTTCAGAAAA+GGG - chr2_4:23091794-23091813 None:intergenic 35.0%
!! CCTTTTCTGAAAAGGTTGTT+GGG + chr2_4:23091792-23091811 Msa0321620:CDS 35.0%
!! ATTTTGGTGACACCCTTTTA+AGG + chr2_4:23091861-23091880 Msa0321620:CDS 35.0%
! CAGCAAGCATTTTCCTTAAA+AGG - chr2_4:23091877-23091896 None:intergenic 35.0%
TGTCAATGAAGATCAGAAGA+AGG + chr2_4:23091967-23091986 Msa0321620:CDS 35.0%
GATGGTGATAACTCAAAAGT+TGG - chr2_4:23092040-23092059 None:intergenic 35.0%
AGAAGATGAAGACTATGATG+AGG + chr2_4:23092240-23092259 Msa0321620:CDS 35.0%
GAAGATGAAGACTATGATGA+GGG + chr2_4:23092241-23092260 Msa0321620:CDS 35.0%
AAGGGTAAAAGAGTCATTTG+AGG + chr2_4:23092411-23092430 Msa0321620:CDS 35.0%
! AGTCATTTGAGGAGGTTTTT+GGG + chr2_4:23092422-23092441 Msa0321620:CDS 35.0%
TGTACAAGATAAGGTGATAG+AGG + chr2_4:23092459-23092478 Msa0321620:CDS 35.0%
GATAAGGTGATAGAGGAAAT+TGG + chr2_4:23092466-23092485 Msa0321620:CDS 35.0%
TGATAGAGGAAATTGGTGTA+GGG + chr2_4:23092473-23092492 Msa0321620:CDS 35.0%
ACAAGTTTAGAGAGGGTTAA+TGG + chr2_4:23092550-23092569 Msa0321620:CDS 35.0%
GTGGTAAAGAGGATAGAAAA+TGG + chr2_4:23092611-23092630 Msa0321620:CDS 35.0%
AGGATAGAAAATGGGATAGT+GGG + chr2_4:23092620-23092639 Msa0321620:CDS 35.0%
!! AAAATGGGATAGTGGGTTTA+TGG + chr2_4:23092627-23092646 Msa0321620:CDS 35.0%
!! AAATGGGATAGTGGGTTTAT+GGG + chr2_4:23092628-23092647 Msa0321620:CDS 35.0%
! TCAATCTTGAAGCACTCTCT+AGG + chr2_4:23088416-23088435 Msa0321620:CDS 40.0%
TCAAGAGCTCTACATTGAAG+AGG - chr2_4:23088563-23088582 None:intergenic 40.0%
ATGAGCGCATTAGAAAGTGA+AGG - chr2_4:23088659-23088678 None:intergenic 40.0%
AGCTCAAGCTCATCAAAGAA+GGG + chr2_4:23088694-23088713 Msa0321620:CDS 40.0%
AACAGAAGGGTCATCAAGAA+TGG - chr2_4:23088798-23088817 None:intergenic 40.0%
AGTAGAGTTATGAGAGAAGC+TGG + chr2_4:23088818-23088837 Msa0321620:CDS 40.0%
! TGGAGATTTGAAGTGGATAG+TGG + chr2_4:23089330-23089349 Msa0321620:CDS 40.0%
! GGAAAGTTGTTTGGTGAAGA+AGG + chr2_4:23089412-23089431 Msa0321620:CDS 40.0%
! GTTACATGAGGTGTCAAATG+AGG + chr2_4:23089482-23089501 Msa0321620:CDS 40.0%
GCTAAGTATGTACGGTATTC+TGG + chr2_4:23090099-23090118 Msa0321620:intron 40.0%
GTACGGTATTCTGGACTATA+TGG + chr2_4:23090108-23090127 Msa0321620:intron 40.0%
ATTCTGGACTATATGGCAGA+AGG + chr2_4:23090115-23090134 Msa0321620:intron 40.0%
!! CTGTGAAAAGCATTGTTGGT+TGG + chr2_4:23090140-23090159 Msa0321620:intron 40.0%
!! CATTGTTGGTTGGTAAGGTA+AGG + chr2_4:23090150-23090169 Msa0321620:intron 40.0%
TTGATTCCAGCATAGGAGAT+GGG - chr2_4:23090602-23090621 None:intergenic 40.0%
TTTGATTCCAGCATAGGAGA+TGG - chr2_4:23090603-23090622 None:intergenic 40.0%
TGACCCAGTTGAACAAAAAG+TGG + chr2_4:23091117-23091136 Msa0321620:CDS 40.0%
! TTTTGTTCAGGTGGAGACAT+TGG - chr2_4:23091154-23091173 None:intergenic 40.0%
!! TTGTTGCTCCAATGGTTTTG+AGG - chr2_4:23091179-23091198 None:intergenic 40.0%
AACTGTGATTGTTGCTCCAA+TGG - chr2_4:23091187-23091206 None:intergenic 40.0%
!! TACCTTGGTTTGGCCAATAA+GGG - chr2_4:23091244-23091263 None:intergenic 40.0%
! GATTCTCTTAAGGGTATGGA+AGG + chr2_4:23091440-23091459 Msa0321620:CDS 40.0%
GTAAAGACAACTCTTGCACT+TGG + chr2_4:23091473-23091492 Msa0321620:CDS 40.0%
CTAACTGTTTCACATTGCCA+TGG - chr2_4:23091590-23091609 None:intergenic 40.0%
! AGCACACTCCTTTGATGATT+TGG - chr2_4:23091639-23091658 None:intergenic 40.0%
!!! GCTACTTGGTTGTTTTTGCA+AGG + chr2_4:23091656-23091675 Msa0321620:CDS 40.0%
GCAATTGCAGAATCAGTGTT+TGG + chr2_4:23091713-23091732 Msa0321620:CDS 40.0%
!! AGAGACACCCTTTTCTGAAA+AGG + chr2_4:23091784-23091803 Msa0321620:CDS 40.0%
!! CCCTTTTCTGAAAAGGTTGT+TGG + chr2_4:23091791-23091810 Msa0321620:CDS 40.0%
! CCCAACAACCTTTTCAGAAA+AGG - chr2_4:23091795-23091814 None:intergenic 40.0%
ATTGACAATACTGCCACCAT+TGG - chr2_4:23091954-23091973 None:intergenic 40.0%
GAAGGATTCAGTGATGAAGT+TGG + chr2_4:23091985-23092004 Msa0321620:CDS 40.0%
TCAAAGTCCAGCTAAGAACA+AGG + chr2_4:23092366-23092385 Msa0321620:CDS 40.0%
GTCATTTCCTTGTTCTTAGC+TGG - chr2_4:23092376-23092395 None:intergenic 40.0%
GGTAAAAGAGTCATTTGAGG+AGG + chr2_4:23092414-23092433 Msa0321620:CDS 40.0%
! GAGTCATTTGAGGAGGTTTT+TGG + chr2_4:23092421-23092440 Msa0321620:CDS 40.0%
GTGATAGAGGAAATTGGTGT+AGG + chr2_4:23092472-23092491 Msa0321620:CDS 40.0%
AGTTTAGAGAGGGTTAATGG+TGG + chr2_4:23092553-23092572 Msa0321620:CDS 40.0%
GTTTAGAGAGGGTTAATGGT+GGG + chr2_4:23092554-23092573 Msa0321620:CDS 40.0%
TTTAGAGAGGGTTAATGGTG+GGG + chr2_4:23092555-23092574 Msa0321620:CDS 40.0%
! GTTAATGGTGGGGGTAAAAA+TGG + chr2_4:23092565-23092584 Msa0321620:CDS 40.0%
GTTTATACACTTTGTTGGGG+TGG + chr2_4:23092592-23092611 Msa0321620:CDS 40.0%
GAGGATAGAAAATGGGATAG+TGG + chr2_4:23092619-23092638 Msa0321620:CDS 40.0%
!! TCACTGACTTTGGTTAGTAG+TGG + chr2_4:23092705-23092724 Msa0321620:three_prime_UTR 40.0%
!! CACTGACTTTGGTTAGTAGT+GGG + chr2_4:23092706-23092725 Msa0321620:three_prime_UTR 40.0%
! ACTGACTTTGGTTAGTAGTG+GGG + chr2_4:23092707-23092726 Msa0321620:three_prime_UTR 40.0%
CTTCAAGATTGAAGCAGCCT+CGG - chr2_4:23088408-23088427 None:intergenic 45.0%
! GAAGAGGTGTGATTTGTGCA+TGG - chr2_4:23088460-23088479 None:intergenic 45.0%
ACATGCTGAGGTTGAAGCAA+AGG - chr2_4:23088635-23088654 None:intergenic 45.0%
GAAAGTGAAGGAACATGCTG+AGG - chr2_4:23088647-23088666 None:intergenic 45.0%
GAGCTCAAGCTCATCAAAGA+AGG + chr2_4:23088693-23088712 Msa0321620:CDS 45.0%
GCTCAAGCTCATCAAAGAAG+GGG + chr2_4:23088695-23088714 Msa0321620:CDS 45.0%
CTCAAGCTCATCAAAGAAGG+GGG + chr2_4:23088696-23088715 Msa0321620:CDS 45.0%
GGTGAAGAAGGGAACAAGAA+TGG + chr2_4:23089424-23089443 Msa0321620:CDS 45.0%
!! GGCACTGTGAAAAGCATTGT+TGG + chr2_4:23090136-23090155 Msa0321620:intron 45.0%
TCAAAACCCATCTCCTATGC+TGG + chr2_4:23090593-23090612 Msa0321620:CDS 45.0%
ATGAAGGCAACAGACTCTTC+TGG - chr2_4:23090719-23090738 None:intergenic 45.0%
AGAAGAGTCTGTTGCCTTCA+TGG + chr2_4:23090718-23090737 Msa0321620:CDS 45.0%
CTATGAGACTGAAGCCATGA+AGG - chr2_4:23090735-23090754 None:intergenic 45.0%
! GATTTGAGATCAACCGGTCT+AGG + chr2_4:23090863-23090882 Msa0321620:intron 45.0%
TACCCTTATTGGCCAAACCA+AGG + chr2_4:23091239-23091258 Msa0321620:CDS 45.0%
!! GTACCTTGGTTTGGCCAATA+AGG - chr2_4:23091245-23091264 None:intergenic 45.0%
CTGGCAAGATACTAGTACCT+TGG - chr2_4:23091259-23091278 None:intergenic 45.0%
TGTTGCAGGAGAATGTTCCA+TGG + chr2_4:23091570-23091589 Msa0321620:CDS 45.0%
! CATCAAAGGAGTGTGCTACT+TGG + chr2_4:23091642-23091661 Msa0321620:CDS 45.0%
TTAGAGAGGGTTAATGGTGG+GGG + chr2_4:23092556-23092575 Msa0321620:CDS 45.0%
ACTTTGTTGGGGTGGTAAAG+AGG + chr2_4:23092600-23092619 Msa0321620:CDS 45.0%
CTGACTTTGGTTAGTAGTGG+GGG + chr2_4:23092708-23092727 Msa0321620:three_prime_UTR 45.0%
!! TAAATTATTTAAAAATGATT+CGG - chr2_4:23090836-23090855 None:intergenic 5.0%
CTAGGCTTAGCACGTAGAAG+AGG + chr2_4:23088434-23088453 Msa0321620:CDS 50.0%
AGTGTAGCAGCAACGTGAAG+AGG - chr2_4:23088476-23088495 None:intergenic 50.0%
CAAGCTGTTCCTGTTCCATC+TGG + chr2_4:23089535-23089554 Msa0321620:CDS 50.0%
CTCAAACCAAGTCCACCAGA+TGG - chr2_4:23089553-23089572 None:intergenic 50.0%
! TAGCACAGAAGCACGTCAGA+AGG + chr2_4:23090752-23090771 Msa0321620:CDS 50.0%
TGCATGATTGTTGTCCGCGA+CGG - chr2_4:23091355-23091374 None:intergenic 50.0%
GAGGAAATTGGTGTAGGGTG+TGG + chr2_4:23092478-23092497 Msa0321620:CDS 50.0%
! ACTTTGGTTAGTAGTGGGGG+TGG + chr2_4:23092711-23092730 Msa0321620:three_prime_UTR 50.0%
GCAAGAGACACTAACAGCCG+AGG + chr2_4:23088388-23088407 Msa0321620:CDS 55.0%
GTGGTTGCTGCTGTTGCTGT+TGG - chr2_4:23088736-23088755 None:intergenic 55.0%
GCTGTTCCTGTTCCATCTGG+TGG + chr2_4:23089538-23089557 Msa0321620:CDS 55.0%
CCAAGTCCACCAGATGGAAC+AGG - chr2_4:23089547-23089566 None:intergenic 55.0%
!! CCTGTTCCATCTGGTGGACT+TGG + chr2_4:23089544-23089563 Msa0321620:CDS 55.0%
GGCAACAGACTCTTCTGGTC+TGG - chr2_4:23090714-23090733 None:intergenic 55.0%
CTTATACCTCGGTTCCGTCG+CGG + chr2_4:23091338-23091357 Msa0321620:CDS 55.0%
CGCGACGGAACCGAGGTATA+AGG - chr2_4:23091340-23091359 None:intergenic 60.0%
TGTTGTCCGCGACGGAACCG+AGG - chr2_4:23091347-23091366 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 23088355 23092774 23088355 ID=Msa0321620;Name=Msa0321620
chr2_4 mRNA 23088355 23092774 23088355 ID=Msa0321620-mRNA-1;Parent=Msa0321620;Name=Msa0321620-mRNA-1;_AED=0.01;_eAED=0.01;_QI=10|1|1|1|1|1|3|75|1006
chr2_4 exon 23088355 23089587 23088355 ID=Msa0321620-mRNA-1:exon:8454;Parent=Msa0321620-mRNA-1
chr2_4 exon 23090566 23090773 23090566 ID=Msa0321620-mRNA-1:exon:8455;Parent=Msa0321620-mRNA-1
chr2_4 exon 23091110 23092774 23091110 ID=Msa0321620-mRNA-1:exon:8456;Parent=Msa0321620-mRNA-1
chr2_4 five_prime_UTR 23088355 23088364 23088355 ID=Msa0321620-mRNA-1:five_prime_utr;Parent=Msa0321620-mRNA-1
chr2_4 CDS 23088365 23089587 23088365 ID=Msa0321620-mRNA-1:cds;Parent=Msa0321620-mRNA-1
chr2_4 CDS 23090566 23090773 23090566 ID=Msa0321620-mRNA-1:cds;Parent=Msa0321620-mRNA-1
chr2_4 CDS 23091110 23092699 23091110 ID=Msa0321620-mRNA-1:cds;Parent=Msa0321620-mRNA-1
chr2_4 three_prime_UTR 23092700 23092774 23092700 ID=Msa0321620-mRNA-1:three_prime_utr;Parent=Msa0321620-mRNA-1
Gene Sequence

>Msa0321620

ATGCGCTCAGGAGCTTATACATTGCAAGAGACACTAACAGCCGAGGCTGCTTCAATCTTGAAGCACTCTCTAGGCTTAGCACGTAGAAGAGGCCATGCACAAATCACACCTCTTCACGTTGCTGCTACACTTTTGAGTTTACCATCTTCTTCTTTAAGAAATGCATGTCTCAAATCTCAACAACAAAATAATCATCCTCTTCAATGTAGAGCTCTTGAACTTTGCTTCAATGTTGCTCTTAATAGACTTCCAACTACAACTACTTCACCTTTGCTTCAACCTCAGCATGTTCCTTCACTTTCTAATGCGCTCATTGCTGCTCTTAAAAGAGCTCAAGCTCATCAAAGAAGGGGGTGTATTGAGCAAAACCAACAGCAACAGCAGCAACCACTTTTGAGTGTTAAAGTTGAACTTGATCAGCTTATTCTCTCCATTCTTGATGACCCTTCTGTTAGTAGAGTTATGAGAGAAGCTGGTTTTTCTAGTCCTTCTGTTAAAAACAATTTGGAAAACTCTTCAACTTTATTAAACTCTTCTGTTTTTCATTCTTCACCTTCTCTTAGTCATAACCATTTTTTGAGTTCTTATGGTTATGGTTCTGTTCTCTTTTCTTCACAGAAGAAAGAACAAGTAGTATATCATCCTTTCTTAAAATCTTCTGAGTCTAATAAGGAAGATATTAATCTTGTTTTTGATGTTCTTTTGAGAAAGAAGAAGAAGAACACTGTGATAGTTGGTGATACAGTTTCTTTAACTGAAGGACTAGTTGGTGAAATAATGAAAAGATTTGAAAGAGGTGAAGTACCTGATGAGATGAAAAAAACTCATTTTGTGAAGTTTCATGGACTTAGTTCAGTTTCTTTGAAGTATATGAAAAAGGAAGAAGTTGAAATGAATGTTATAAGAGTGTTGAAAAGGAAAGTTAGTGATTATGTTGCATTAGGTGTTGGAGCTATTTTCTATGTTGGAGATTTGAAGTGGATAGTGGATGATAATGATGGAAGTTTGAATGAAAAAGAGATTGTTGATTATGTTGTGGAAGAAATAGGAAAGTTGTTTGGTGAAGAAGGGAACAAGAATGGTAAGATTTGGCTTGTTGCAACAGCTAGTTATCAAAGTTACATGAGGTGTCAAATGAGGGTACCAACTTTTGAGAATCAATGGTGTCTTCAAGCTGTTCCTGTTCCATCTGGTGGACTTGGTTTGAGTCTTCATTCATCAAGTGTGCATGATTCAAAAATGAGCATCTCTCAAAACCCATCTCCTATGCTGGAATCAAAGTTTTTCAGTAACAAGGAGGAACATGAGAAGCTTAATTGTTGTGAAGAGTGTGCCTCCAATTATGAAAAAGAAGCTCAATTGTTCAAACCAGACCAGAAGAGTCTGTTGCCTTCATGGCTTCAGTCTCATAGCACAGAAGCACGTCAGAAGGATGAATTGACCCAGTTGAACAAAAAGTGGAACAGATTGTGCCAATGTCTCCACCTGAACAAAAAACCTCAAAACCATTGGAGCAACAATCACAGTTCAAATGCTAAGATCTACCCTTATAATTCATCATACCCTTATTGGCCAAACCAAGGTACTAGTATCTTGCCAGATACACCAAGTTCAATATCTTTTGTTGATTCTGCAACCAAACCAGCTTATAGTTCAAACCTTATACCTCGGTTCCGTCGCGGACAACAATCATGCACCATTGAGTTCAACTTCAATGATGAAAAATCTCAAAAAAACCAAGTAACAACAACCTTGGAATTGGATTCTCTTAAGGGTATGGAAGGTACTAAAGAAGTAAAGACAACTCTTGCACTTGGAAATTCAACATTCAGTGGTTCAGATCAGAAAAAGATGGAAAATTTAACACTGCAAAGAGATCATATATACAAAGTGTTGCAGGAGAATGTTCCATGGCAATGTGAAACAGTTAGTTCAATAGCAGAAGCTTTGGTTGATTCCAAATCATCAAAGGAGTGTGCTACTTGGTTGTTTTTGCAAGGAAATGATTCTGTTGGGAAAAAAAGGTTGGCACTTGCAATTGCAGAATCAGTGTTTGGATCAGTTGAAATGTTTTCTCAGATGGATATGATGAAGAGAGAGAATTCAGAGACACCCTTTTCTGAAAAGGTTGTTGGGCCATTGAAAAACAATGAAAAGTTTGTTGTTTTGGTTGAAAATGCTGATTTTGGTGACACCCTTTTAAGGAAAATGCTTGCTGATGAATTTGAGATTGCAAAGTTTGGAACTTTAGGCCAAAAAATATTCATATTGTCCAATGGTGGCAGTATTGTCAATGAAGATCAGAAGAAGGATTCAGTGATGAAGTTGGTTTTGAAGATTAGTGAAACTGAGAAAAAACCAACTTTTGAGTTATCACCATCTTCATCATCATCAAAATCACCTTATTTAGGTAATAAAAGAAGTGCTGAACTTGACTTGTTTAGCAAGATAAAAACTCCAAGGATTGAAGAAAATAAAGGGAACAAAAAGAGAGAATTTTCATTTTCAAGACAATCAAGCTTCAACAACACTCTTGATTTGAATATGAAAGCTGATGAAGAAGAAGATGAAGACTATGATGAGGGAGAAAATAGTCCAATTTCAAGTGATTTGACAAGAGAAACATTAGGAGAACATTTGATCTCAAATGAGTCCCTAGACTCAATTGAGAATTTGTTTGAGTTCAATCAAAGTCCAGCTAAGAACAAGGAAATGACAAAGATGTTTATGTCAAGGGTAAAAGAGTCATTTGAGGAGGTTTTTGGGAATGTAAAATTTAGTGTACAAGATAAGGTGATAGAGGAAATTGGTGTAGGGTGTGGTTCTTTTACTAACAACATGTTTGAGAAATGGCTAAAAGGCATTTTTCAAACAAGTTTAGAGAGGGTTAATGGTGGGGGTAAAAATGGTATAGTTTATACACTTTGTTGGGGTGGTAAAGAGGATAGAAAATGGGATAGTGGGTTTATGGGTTCATGTTTGCCTAAAAATATCCAAATTGTTAACTACTTAATGGATTGA

Protein sequence

>Msa0321620

MRSGAYTLQETLTAEAASILKHSLGLARRRGHAQITPLHVAATLLSLPSSSLRNACLKSQQQNNHPLQCRALELCFNVALNRLPTTTTSPLLQPQHVPSLSNALIAALKRAQAHQRRGCIEQNQQQQQQPLLSVKVELDQLILSILDDPSVSRVMREAGFSSPSVKNNLENSSTLLNSSVFHSSPSLSHNHFLSSYGYGSVLFSSQKKEQVVYHPFLKSSESNKEDINLVFDVLLRKKKKNTVIVGDTVSLTEGLVGEIMKRFERGEVPDEMKKTHFVKFHGLSSVSLKYMKKEEVEMNVIRVLKRKVSDYVALGVGAIFYVGDLKWIVDDNDGSLNEKEIVDYVVEEIGKLFGEEGNKNGKIWLVATASYQSYMRCQMRVPTFENQWCLQAVPVPSGGLGLSLHSSSVHDSKMSISQNPSPMLESKFFSNKEEHEKLNCCEECASNYEKEAQLFKPDQKSLLPSWLQSHSTEARQKDELTQLNKKWNRLCQCLHLNKKPQNHWSNNHSSNAKIYPYNSSYPYWPNQGTSILPDTPSSISFVDSATKPAYSSNLIPRFRRGQQSCTIEFNFNDEKSQKNQVTTTLELDSLKGMEGTKEVKTTLALGNSTFSGSDQKKMENLTLQRDHIYKVLQENVPWQCETVSSIAEALVDSKSSKECATWLFLQGNDSVGKKRLALAIAESVFGSVEMFSQMDMMKRENSETPFSEKVVGPLKNNEKFVVLVENADFGDTLLRKMLADEFEIAKFGTLGQKIFILSNGGSIVNEDQKKDSVMKLVLKISETEKKPTFELSPSSSSSKSPYLGNKRSAELDLFSKIKTPRIEENKGNKKREFSFSRQSSFNNTLDLNMKADEEEDEDYDEGENSPISSDLTRETLGEHLISNESLDSIENLFEFNQSPAKNKEMTKMFMSRVKESFEEVFGNVKFSVQDKVIEEIGVGCGSFTNNMFEKWLKGIFQTSLERVNGGGKNGIVYTLCWGGKEDRKWDSGFMGSCLPKNIQIVNYLMD*