AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0426430


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0426430 MtrunA17_Chr3g0128451 99.587 484 1 1 1 483 1 484 0.0 994
Msa0426430 MtrunA17_Chr5g0428701 88.608 474 50 4 12 483 17 488 0.0 863
Msa0426430 MtrunA17_Chr7g0245501 74.944 443 80 5 44 483 74 488 0.0 667
Msa0426430 MtrunA17_Chr4g0057181 60.586 307 92 7 163 463 24 307 1.53e-112 335
Msa0426430 MtrunA17_Chr4g0057191 58.000 250 97 3 27 275 12 254 1.72e-88 271
Msa0426430 MtrunA17_Chr4g0057201 59.701 201 54 6 289 483 5 184 7.77e-69 218
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0426430 AT3G54190.1 83.090 479 67 4 5 483 3 467 0.0 809
Msa0426430 AT2G38630.1 80.585 479 78 4 5 483 4 467 0.0 783
Msa0426430 AT2G38630.2 83.673 392 59 2 5 396 4 390 0.0 672
Msa0426430 AT2G38630.3 78.834 326 61 4 5 330 4 321 8.30e-180 507

Find 113 sgRNAs with CRISPR-Local

Find 350 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTTGTACTTCTGCATTTC+AGG 0.137058 3_2:+76807157 None:intergenic
ACTATTGCTTGCTCTTATTT+TGG 0.142620 3_2:+76805245 None:intergenic
GTAATCTATCGTTACATTAA+TGG 0.182197 3_2:-76804791 Msa0426430:three_prime_UTR
GGCAACTGTGCTCCTCATTT+TGG 0.199495 3_2:+76805146 None:intergenic
CGTTCAACCATCTTCTTTAT+CGG 0.228283 3_2:-76806312 Msa0426430:CDS
GTAGAGTTTGATGATGTAAA+TGG 0.233273 3_2:-76806835 Msa0426430:CDS
GCATTGTTTACAACATATTT+TGG 0.236339 3_2:+76804753 None:intergenic
TTCGAAATGTCAGGAATAAT+TGG 0.249410 3_2:+76806054 None:intergenic
ATGAAATCTATACGGGAAAT+AGG 0.280316 3_2:-76805077 Msa0426430:CDS
ACCACAGACGAAGGACCTTT+TGG 0.282699 3_2:+76807493 None:intergenic
ATTCCGCAATATTCGTTTGC+AGG 0.333249 3_2:-76809174 Msa0426430:intron
AGATCGCAATGAAATCTATA+CGG 0.334449 3_2:-76805085 Msa0426430:CDS
TGATCTATTGTATGAACATT+CGG 0.349190 3_2:-76804953 Msa0426430:three_prime_UTR
CTGTGAGGTGGTGAAGAATA+TGG 0.356251 3_2:-76809387 Msa0426430:exon
TAAAATGTTGCTGACATTGA+TGG 0.401179 3_2:+76805284 None:intergenic
ACTGACCGTGATTCTTCTTC+CGG 0.401954 3_2:+76809358 None:intergenic
GATCTATTGTATGAACATTC+GGG 0.415066 3_2:-76804952 Msa0426430:three_prime_UTR
TCAGTCCCGATGAAGTTATA+AGG 0.416657 3_2:-76807251 Msa0426430:CDS
CGCGGTGGTCGAACGGTGGA+TGG 0.421145 3_2:-76809284 Msa0426430:CDS
AAAAGAGCAAAGCCAGCATC+TGG 0.421789 3_2:+76806889 None:intergenic
GTGAAAGTTTGTTCGTTAGT+TGG 0.426449 3_2:-76804868 Msa0426430:three_prime_UTR
CCTTGTACTTCTGCATTTCA+GGG 0.428447 3_2:+76807158 None:intergenic
CGAGTTCAGAAAATTTGAAA+CGG 0.432070 3_2:-76809580 Msa0426430:five_prime_UTR
TAGAGTTTGATGATGTAAAT+GGG 0.441258 3_2:-76806834 Msa0426430:CDS
TGAATGATACAAACACTTAG+TGG 0.450276 3_2:+76804919 None:intergenic
GAGTTCAGAAAATTTGAAAC+GGG 0.456315 3_2:-76809579 Msa0426430:five_prime_UTR
GGTAATATCTTCCAAGGCTT+CGG 0.457415 3_2:+76805125 None:intergenic
TAAAGAGATGAATTAGGAAG+AGG 0.466260 3_2:+76804726 None:intergenic
ATCTTTATGAAGTGCTATGC+TGG 0.468525 3_2:-76804839 Msa0426430:three_prime_UTR
TCTTATTCCGATAAAGAAGA+TGG 0.472412 3_2:+76806305 None:intergenic
AGACTCCTTATAACTTCATC+GGG 0.473998 3_2:+76807246 None:intergenic
TACTTACATCAAGAATTTGA+AGG 0.474134 3_2:+76806224 None:intergenic
TGACGAATGACGAATTCAAT+TGG 0.476191 3_2:+76809549 None:intergenic
GAGCACAGTTGCCGAAGCCT+TGG 0.477858 3_2:-76805136 Msa0426430:CDS
AGTTGCTGTGACAGTTCTTC+AGG 0.483179 3_2:-76805204 Msa0426430:CDS
CAGCAACTGCACTTGTCCAT+TGG 0.487604 3_2:+76805219 None:intergenic
ATCAAAGATTATTGAGATTG+TGG 0.488197 3_2:-76807449 Msa0426430:CDS
GGCACGGTCTAGTTCATGTC+TGG 0.488541 3_2:-76805056 Msa0426430:CDS
CACCGTTCGACCACCGCGAC+CGG 0.490444 3_2:+76809289 None:intergenic
TCACATACTCTGCTCAAGAT+AGG 0.490784 3_2:-76806804 Msa0426430:intron
GTTACCTGATCTTAATCTCC+TGG 0.492932 3_2:+76806614 None:intergenic
GATTCGTTAACTGAAGGAAA+TGG 0.502533 3_2:-76805882 Msa0426430:intron
CCCTGAAATGCAGAAGTACA+AGG 0.504167 3_2:-76807158 Msa0426430:CDS
CTTCGGCCGCAACAAGGTCT+AGG 0.508662 3_2:+76809335 None:intergenic
ATGTTGTTTGTATTGCAGTC+AGG 0.511543 3_2:+76805960 None:intergenic
ACTAAAAGCACGATCACGCT+TGG 0.514589 3_2:+76809217 None:intergenic
GACGCGAAGAAGACCGGTCG+CGG 0.514863 3_2:-76809302 Msa0426430:CDS
TCGCGTCGACTCTGACTCTT+CGG 0.529810 3_2:+76809318 None:intergenic
TAGACTCCTTATAACTTCAT+CGG 0.530231 3_2:+76807245 None:intergenic
GACCGGTCGCGGTGGTCGAA+CGG 0.530668 3_2:-76809291 Msa0426430:CDS
AGGAACGAGAGAACGAAAAG+AGG 0.533439 3_2:+76809500 None:intergenic
CAGTACCGTCTTCTATTGAA+AGG 0.534240 3_2:+76806344 None:intergenic
AAAGAGATGAATTAGGAAGA+GGG 0.536541 3_2:+76804727 None:intergenic
TTGAATCTGAGTCTCTAAAG+TGG 0.537211 3_2:-76806867 Msa0426430:CDS
TATGATAAGATCCTGGTCAC+TGG 0.542139 3_2:+76805929 None:intergenic
TCTTCTTTATCGGAATAAGA+AGG 0.542427 3_2:-76806302 Msa0426430:CDS
GCGGAATCGTTCTTGCGCAT+CGG 0.542913 3_2:+76809190 None:intergenic
TCTGAGTCTCTAAAGTGGCC+AGG 0.543538 3_2:-76806862 Msa0426430:CDS
AGAGTCGACGCGAAGAAGAC+CGG 0.545154 3_2:-76809308 Msa0426430:CDS
AGATGAATTAGGAAGAGGGT+TGG 0.545223 3_2:+76804731 None:intergenic
ATTACAACAGAAGCAACATC+TGG 0.545348 3_2:+76804809 None:intergenic
GTTACATTAATGGAGCAGCT+TGG 0.555441 3_2:-76804781 Msa0426430:three_prime_UTR
CAGTACGGTTTCGAAATGTC+AGG 0.555794 3_2:+76806045 None:intergenic
TATGATACGCATGACCCAAA+AGG 0.557194 3_2:-76807508 Msa0426430:CDS
GTGAAGAATATGGAAGGTAC+CGG 0.559590 3_2:-76809377 Msa0426430:exon
TCATCAAACTCTACGAAACC+TGG 0.562829 3_2:+76806844 None:intergenic
GATCGCAATGAAATCTATAC+GGG 0.565753 3_2:-76805084 Msa0426430:CDS
AGCAAGCAATAGTTCTCCAA+TGG 0.570142 3_2:-76805235 Msa0426430:CDS
TTTGTCTTACAGCATATACA+AGG 0.570671 3_2:-76806689 Msa0426430:intron
AGACGGGGTAAACCAGATGC+TGG 0.576116 3_2:-76806901 Msa0426430:CDS
ACGTCCAGGAGATTAAGATC+AGG 0.585658 3_2:-76806618 Msa0426430:intron
CTGACTCTTCGGCCGCAACA+AGG 0.586343 3_2:+76809329 None:intergenic
GTTGTTCAGATACATCAGAC+GGG 0.587956 3_2:-76806917 Msa0426430:intron
AGTAGGATATGATAAGATCC+TGG 0.588379 3_2:+76805922 None:intergenic
TGTTGTTCAGATACATCAGA+CGG 0.594045 3_2:-76806918 Msa0426430:intron
AAAATCCTTTCAATAGAAGA+CGG 0.594057 3_2:-76806349 Msa0426430:CDS
AGTTCCACACAGCCACAGTA+CGG 0.595254 3_2:+76806030 None:intergenic
TCTGACGATTCGTTAACTGA+AGG 0.595644 3_2:-76805888 Msa0426430:CDS
TTCACATGGCGTACATGACA+AGG 0.597500 3_2:+76804886 None:intergenic
GAAAGCATGTCTCCAAAATG+AGG 0.597812 3_2:-76805158 Msa0426430:CDS
TCTTTATCGGAATAAGAAGG+TGG 0.601059 3_2:-76806299 Msa0426430:CDS
GTGGCTGTGTGGAACTTCCG+TGG 0.603234 3_2:-76806023 Msa0426430:CDS
GAATTATTGTTACTGTGAGG+TGG 0.607227 3_2:-76809399 Msa0426430:five_prime_UTR
CCCAAAAGGTCCTTCGTCTG+TGG 0.607401 3_2:-76807494 Msa0426430:CDS
TGCTGTGACAGTTCTTCAGG+CGG 0.607506 3_2:-76805201 Msa0426430:CDS
CATATATATAACCAGTGACC+AGG 0.608399 3_2:-76805940 Msa0426430:CDS
GAGAGCGGTAATATCTTCCA+AGG 0.611956 3_2:+76805119 None:intergenic
CGGTCGCGGTGGTCGAACGG+TGG 0.613275 3_2:-76809288 Msa0426430:CDS
ATCTATACGGGAAATAGGCA+CGG 0.614529 3_2:-76805072 Msa0426430:CDS
GTTTGATGATGTAAATGGGA+AGG 0.617058 3_2:-76806830 Msa0426430:CDS
TAAAGAAAGATAAATGCAGA+AGG 0.617128 3_2:+76806083 None:intergenic
AAAATCAACAACATGATCCC+AGG 0.618639 3_2:+76806400 None:intergenic
ATCAGAAATGGAGTACAACA+TGG 0.623758 3_2:+76806645 None:intergenic
ATTGTATGAACATTCGGGAG+CGG 0.625277 3_2:-76804947 Msa0426430:three_prime_UTR
TAACCTGCAAACGAATATTG+CGG 0.625458 3_2:+76809171 None:intergenic
AGTCAGGATGCCACAAGAGG+TGG 0.633776 3_2:+76805976 None:intergenic
GTTTGTGCAGCATTCAGCCG+AGG 0.639705 3_2:-76807388 Msa0426430:intron
TGCAGTCAGGATGCCACAAG+AGG 0.640084 3_2:+76805973 None:intergenic
GCGAAGAAGACCGGTCGCGG+TGG 0.646902 3_2:-76809299 Msa0426430:CDS
AAAGCCAATAAGAAAACACA+AGG 0.657103 3_2:+76805000 None:intergenic
CTAACGAACAAACTTTCACA+TGG 0.657391 3_2:+76804872 None:intergenic
AAGAAGTTACAAGCTCTCCA+CGG 0.664948 3_2:+76806006 None:intergenic
GTCAGTCCTAGACCTTGTTG+CGG 0.664976 3_2:-76809341 Msa0426430:CDS
GTCAGAATCAGCTTTGCAGT+AGG 0.668522 3_2:+76805905 None:intergenic
GACATTTCGAAACCGTACTG+TGG 0.671777 3_2:-76806042 Msa0426430:CDS
GGTGAATTATTGTTACTGTG+AGG 0.672568 3_2:-76809402 Msa0426430:five_prime_UTR
AGGTACCGGAAGAAGAATCA+CGG 0.678839 3_2:-76809363 Msa0426430:CDS
GAGGTGGTGAAGAATATGGA+AGG 0.692900 3_2:-76809383 Msa0426430:exon
AATGGCAATACCACAGACGA+AGG 0.699297 3_2:+76807484 None:intergenic
GAAACCGTACTGTGGCTGTG+TGG 0.713236 3_2:-76806034 Msa0426430:CDS
TGAGTTTCATGAACGAACGA+AGG 0.721655 3_2:+76809480 None:intergenic
ATCTTCGTCATAGAAGAGAG+CGG 0.733350 3_2:+76805104 None:intergenic
TTGTTCAGATACATCAGACG+GGG 0.739159 3_2:-76806916 Msa0426430:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTACTTTTCTTTTTAAATTA+AGG - chr3_2:76805877-76805896 Msa0426430:intron 10.0%
!!! TCATTTTTAAAAACATATTA+TGG + chr3_2:76805906-76805925 None:intergenic 10.0%
!!! ATTTTATTTAAAAAATAGTC+AGG - chr3_2:76806616-76806635 Msa0426430:intron 10.0%
!! TTAAAAATGAATTACTCTTA+AGG - chr3_2:76805916-76805935 Msa0426430:CDS 15.0%
!!! ATTCTTTTAAAGTTATGATA+TGG - chr3_2:76806418-76806437 Msa0426430:intron 15.0%
!!! AGTTTGGAATAAATATTTAA+AGG + chr3_2:76808788-76808807 None:intergenic 15.0%
!! AAATTAATTGTAATCCAATC+AGG + chr3_2:76805345-76805364 None:intergenic 20.0%
!! CTTATAATAAGCCTTTATAT+AGG + chr3_2:76805398-76805417 None:intergenic 20.0%
!!! CATAACTTTAAAAGAATTGA+AGG + chr3_2:76806415-76806434 None:intergenic 20.0%
!!! TACTTTTTTGTTTGTTTTTG+TGG - chr3_2:76806492-76806511 Msa0426430:intron 20.0%
!! ATATTGCAAACAAAATGAAA+AGG + chr3_2:76806977-76806996 None:intergenic 20.0%
!! AAGATATGCAAATATGTATT+TGG - chr3_2:76808605-76808624 Msa0426430:intron 20.0%
!!! TATGTATATTTTTTGCTGTA+AGG - chr3_2:76808948-76808967 Msa0426430:intron 20.0%
!! GAAAAATAAAGAGATGAATT+AGG + chr3_2:76809596-76809615 None:intergenic 20.0%
!! TTTCTTTCTTATACTCGTTT+TGG - chr3_2:76805255-76805274 Msa0426430:CDS 25.0%
! TAAACCCTTATCCTATATAA+AGG - chr3_2:76805384-76805403 Msa0426430:intron 25.0%
! TAAGCCTTTATATAGGATAA+GGG + chr3_2:76805391-76805410 None:intergenic 25.0%
! ATAAGCCTTTATATAGGATA+AGG + chr3_2:76805392-76805411 None:intergenic 25.0%
! TTAAATAAGTCAATCCAAAG+AGG - chr3_2:76805561-76805580 Msa0426430:intron 25.0%
! AAGAAAATAGTGGTAAGTAT+GGG + chr3_2:76805587-76805606 None:intergenic 25.0%
! TAAGAAAATAGTGGTAAGTA+TGG + chr3_2:76805588-76805607 None:intergenic 25.0%
! TAGCTATGTTAAGAAAATAG+TGG + chr3_2:76805597-76805616 None:intergenic 25.0%
! ATCCTTTGATTATTGATGAA+TGG - chr3_2:76805620-76805639 Msa0426430:intron 25.0%
! TTCCATTCATCAATAATCAA+AGG + chr3_2:76805625-76805644 None:intergenic 25.0%
! TTGATTATTGATGAATGGAA+TGG - chr3_2:76805625-76805644 Msa0426430:intron 25.0%
!!! AATGCTTTTTGTATAAAGCA+AGG - chr3_2:76805738-76805757 Msa0426430:intron 25.0%
!!! ATGCTTTTTGTATAAAGCAA+GGG - chr3_2:76805739-76805758 Msa0426430:intron 25.0%
! AACAAACAAAAAAGTAGTAC+AGG + chr3_2:76806488-76806507 None:intergenic 25.0%
!!! TTTTTTGTTTGTTTTTGTGG+TGG - chr3_2:76806495-76806514 Msa0426430:intron 25.0%
! ATAAATAAATCCATCAGACA+GGG + chr3_2:76806777-76806796 None:intergenic 25.0%
! TATAAATAAATCCATCAGAC+AGG + chr3_2:76806778-76806797 None:intergenic 25.0%
!!! TGTCTGATGGATTTATTTAT+AGG - chr3_2:76806777-76806796 Msa0426430:intron 25.0%
!! TTTGATCTTTTTCTCAGAAA+TGG + chr3_2:76806850-76806869 None:intergenic 25.0%
! ATCAAAGATTATTGAGATTG+TGG - chr3_2:76806864-76806883 Msa0426430:CDS 25.0%
!! ATTGTGCATTTTGAATGATT+TGG + chr3_2:76807299-76807318 None:intergenic 25.0%
! ATGCACAATAACTAAAAGAA+AGG - chr3_2:76807310-76807329 Msa0426430:intron 25.0%
! AAAACACAAATACTAAAACC+TGG + chr3_2:76807360-76807379 None:intergenic 25.0%
!!! TAGAGTTTGATGATGTAAAT+GGG - chr3_2:76807479-76807498 Msa0426430:CDS 25.0%
! TATATTATGCAATTATACCC+TGG + chr3_2:76807564-76807583 None:intergenic 25.0%
! TATATGCTGTAAGACAAAAA+AGG + chr3_2:76807622-76807641 None:intergenic 25.0%
! ATACTCGAAGAAAGTAAAAA+AGG + chr3_2:76807848-76807867 None:intergenic 25.0%
!!! CTATTGAAAGGATTTTAAGT+GGG + chr3_2:76807960-76807979 None:intergenic 25.0%
!! TCTATTGAAAGGATTTTAAG+TGG + chr3_2:76807961-76807980 None:intergenic 25.0%
! AAAATCCTTTCAATAGAAGA+CGG - chr3_2:76807964-76807983 Msa0426430:intron 25.0%
! TACTTACATCAAGAATTTGA+AGG + chr3_2:76808092-76808111 None:intergenic 25.0%
! TATTTATAGTGCAAGATAGA+AGG + chr3_2:76808119-76808138 None:intergenic 25.0%
!! CTCACTTACGTATAAATTTT+AGG - chr3_2:76808160-76808179 Msa0426430:intron 25.0%
! TAAAGAAAGATAAATGCAGA+AGG + chr3_2:76808233-76808252 None:intergenic 25.0%
! TGACAGAAAAGGAATAAATT+AGG + chr3_2:76808464-76808483 None:intergenic 25.0%
! TTATTAGAAAGTGACAGAAA+AGG + chr3_2:76808475-76808494 None:intergenic 25.0%
!!! ATTTTTGAAACTTGTAGCTT+AGG - chr3_2:76808525-76808544 Msa0426430:intron 25.0%
!!! CTGAAAATTTAGGTTCTTTT+TGG - chr3_2:76808557-76808576 Msa0426430:intron 25.0%
! TTGATCTGCTAAACATAATA+TGG - chr3_2:76808871-76808890 Msa0426430:intron 25.0%
! TGATCTATTGTATGAACATT+CGG - chr3_2:76809360-76809379 Msa0426430:CDS 25.0%
! GTAATCTATCGTTACATTAA+TGG - chr3_2:76809522-76809541 Msa0426430:five_prime_UTR 25.0%
!! GCATTGTTTACAACATATTT+TGG + chr3_2:76809563-76809582 None:intergenic 25.0%
! CGTTTCAAATTTTCTGAACT+CGG + chr3_2:76804735-76804754 None:intergenic 30.0%
CGAGTTCAGAAAATTTGAAA+CGG - chr3_2:76804733-76804752 Msa0426430:three_prime_UTR 30.0%
! GAGTTCAGAAAATTTGAAAC+GGG - chr3_2:76804734-76804753 Msa0426430:three_prime_UTR 30.0%
!! AATTAGGGTTTTGTACGAAA+AGG + chr3_2:76804876-76804895 None:intergenic 30.0%
CATCTGAAAAACGAGAATTA+GGG + chr3_2:76804891-76804910 None:intergenic 30.0%
!! CTAATTCTCGTTTTTCAGAT+GGG - chr3_2:76804890-76804909 Msa0426430:three_prime_UTR 30.0%
TAAACATTTGTAAGGCCATT+CGG + chr3_2:76805526-76805545 None:intergenic 30.0%
CACTGACATAAACATTTGTA+AGG + chr3_2:76805534-76805553 None:intergenic 30.0%
CTTACAAATGTTTATGTCAG+TGG - chr3_2:76805532-76805551 Msa0426430:intron 30.0%
!! TGCTTTTTGTATAAAGCAAG+GGG - chr3_2:76805740-76805759 Msa0426430:intron 30.0%
! AAATGTGATTTTCGTAGTGT+TGG - chr3_2:76805809-76805828 Msa0426430:intron 30.0%
! AATGTGATTTTCGTAGTGTT+GGG - chr3_2:76805810-76805829 Msa0426430:intron 30.0%
TCAATGATTGTATTGGAAGA+GGG - chr3_2:76806178-76806197 Msa0426430:intron 30.0%
GTTGGAAATATAGGAGAAAA+TGG + chr3_2:76806351-76806370 None:intergenic 30.0%
! AAGAATTGAAGGCTTTGTAT+GGG + chr3_2:76806404-76806423 None:intergenic 30.0%
! AAAGAATTGAAGGCTTTGTA+TGG + chr3_2:76806405-76806424 None:intergenic 30.0%
TTATGATATGGTCATTGAGA+GGG - chr3_2:76806430-76806449 Msa0426430:intron 30.0%
!!! TGAAGTGTGTTTTTTGTTTG+TGG - chr3_2:76806546-76806565 Msa0426430:intron 30.0%
TCATTGCAAATCATTGATGT+CGG - chr3_2:76806672-76806691 Msa0426430:CDS 30.0%
TATCAAAACAGGAGAAACAA+AGG + chr3_2:76806703-76806722 None:intergenic 30.0%
!! CTGATGGATTTATTTATAGG+AGG - chr3_2:76806780-76806799 Msa0426430:intron 30.0%
TAGACTCCTTATAACTTCAT+CGG + chr3_2:76807071-76807090 None:intergenic 30.0%
GGGTAGGAATTATAAAACAA+TGG + chr3_2:76807200-76807219 None:intergenic 30.0%
AAAACAATATCCTTGAGTGA+GGG + chr3_2:76807229-76807248 None:intergenic 30.0%
TAAAACAATATCCTTGAGTG+AGG + chr3_2:76807230-76807249 None:intergenic 30.0%
!!! TGTATTTTTTCCTTGAGTGA+GGG + chr3_2:76807271-76807290 None:intergenic 30.0%
ATATCAACATTTGCATTTCC+AGG - chr3_2:76807339-76807358 Msa0426430:intron 30.0%
!! GTAGAGTTTGATGATGTAAA+TGG - chr3_2:76807478-76807497 Msa0426430:CDS 30.0%
TTTGTCTTACAGCATATACA+AGG - chr3_2:76807624-76807643 Msa0426430:intron 30.0%
! ACAACATGGTATAGTTTTTC+AGG + chr3_2:76807657-76807676 None:intergenic 30.0%
ATCATCAAACAAGAGAAAAG+TGG + chr3_2:76807879-76807898 None:intergenic 30.0%
TCTTATTCCGATAAAGAAGA+TGG + chr3_2:76808011-76808030 None:intergenic 30.0%
TCTTCTTTATCGGAATAAGA+AGG - chr3_2:76808011-76808030 Msa0426430:intron 30.0%
! TTTCATTTTCTTGCTTGACA+AGG + chr3_2:76808068-76808087 None:intergenic 30.0%
TTATACGTAAGTGAGATATC+TGG + chr3_2:76808155-76808174 None:intergenic 30.0%
TTCGAAATGTCAGGAATAAT+TGG + chr3_2:76808262-76808281 None:intergenic 30.0%
! AGAACCTAAATTTTCAGATC+TGG + chr3_2:76808554-76808573 None:intergenic 30.0%
TCAACTAACGAAAAACACAT+GGG - chr3_2:76808631-76808650 Msa0426430:intron 30.0%
AGAAGATTCATAATCACAGT+AGG - chr3_2:76808743-76808762 Msa0426430:intron 30.0%
! TTTATTCCAAACTGACTCTT+TGG - chr3_2:76808795-76808814 Msa0426430:intron 30.0%
TAAAATGTTGCTGACATTGA+TGG + chr3_2:76809032-76809051 None:intergenic 30.0%
! AATGTCAGCAACATTTTATC+TGG - chr3_2:76809034-76809053 Msa0426430:intron 30.0%
!! ACTATTGCTTGCTCTTATTT+TGG + chr3_2:76809071-76809090 None:intergenic 30.0%
AGATCGCAATGAAATCTATA+CGG - chr3_2:76809228-76809247 Msa0426430:CDS 30.0%
ATGAAATCTATACGGGAAAT+AGG - chr3_2:76809236-76809255 Msa0426430:CDS 30.0%
AAAGCCAATAAGAAAACACA+AGG + chr3_2:76809316-76809335 None:intergenic 30.0%
!!! TTCTTATTGGCTTTTCTTCA+TGG - chr3_2:76809322-76809341 Msa0426430:CDS 30.0%
!!! TCTTATTGGCTTTTCTTCAT+GGG - chr3_2:76809323-76809342 Msa0426430:CDS 30.0%
GATCTATTGTATGAACATTC+GGG - chr3_2:76809361-76809380 Msa0426430:CDS 30.0%
TGAATGATACAAACACTTAG+TGG + chr3_2:76809397-76809416 None:intergenic 30.0%
AAAGAGATGAATTAGGAAGA+GGG + chr3_2:76809589-76809608 None:intergenic 30.0%
TAAAGAGATGAATTAGGAAG+AGG + chr3_2:76809590-76809609 None:intergenic 30.0%
TGACGAATGACGAATTCAAT+TGG + chr3_2:76804767-76804786 None:intergenic 35.0%
CCATCTGAAAAACGAGAATT+AGG + chr3_2:76804892-76804911 None:intergenic 35.0%
!! CCTAATTCTCGTTTTTCAGA+TGG - chr3_2:76804889-76804908 Msa0426430:three_prime_UTR 35.0%
GGTGAATTATTGTTACTGTG+AGG - chr3_2:76804911-76804930 Msa0426430:three_prime_UTR 35.0%
GAATTATTGTTACTGTGAGG+TGG - chr3_2:76804914-76804933 Msa0426430:three_prime_UTR 35.0%
TAACCTGCAAACGAATATTG+CGG + chr3_2:76805145-76805164 None:intergenic 35.0%
!! AGGTTGAGTTTGTTAGGTTA+TGG - chr3_2:76805211-76805230 Msa0426430:CDS 35.0%
TATGAAGCTATATGCCTGAT+TGG - chr3_2:76805328-76805347 Msa0426430:intron 35.0%
!! GTTGTTTTCACAAGCTATCA+TGG - chr3_2:76805439-76805458 Msa0426430:intron 35.0%
! TTTTCATAAGTTCTCCCGAA+TGG - chr3_2:76805508-76805527 Msa0426430:intron 35.0%
AAACATTTGTAAGGCCATTC+GGG + chr3_2:76805525-76805544 None:intergenic 35.0%
TTTGATTCCCATTGTCACAT+TGG + chr3_2:76805773-76805792 None:intergenic 35.0%
ATGGGAATCAAAAAGTAGCA+TGG - chr3_2:76805781-76805800 Msa0426430:intron 35.0%
! ATGTGATTTTCGTAGTGTTG+GGG - chr3_2:76805811-76805830 Msa0426430:intron 35.0%
! TATGTTTGGATGGATGGTTT+TGG - chr3_2:76805834-76805853 Msa0426430:intron 35.0%
AACTCGCAAACAAATCCTAA+GGG + chr3_2:76806026-76806045 None:intergenic 35.0%
AAACTCGCAAACAAATCCTA+AGG + chr3_2:76806027-76806046 None:intergenic 35.0%
! TTAGGATTTGTTTGCGAGTT+TGG - chr3_2:76806026-76806045 Msa0426430:CDS 35.0%
AAGAAACAGATGACATTGAG+AGG - chr3_2:76806096-76806115 Msa0426430:CDS 35.0%
AGAAACAGATGACATTGAGA+GGG - chr3_2:76806097-76806116 Msa0426430:CDS 35.0%
AATACAAAATCCTCCTCAGT+TGG - chr3_2:76806149-76806168 Msa0426430:intron 35.0%
ATACAAAATCCTCCTCAGTT+GGG - chr3_2:76806150-76806169 Msa0426430:intron 35.0%
CTCAATGATTGTATTGGAAG+AGG - chr3_2:76806177-76806196 Msa0426430:intron 35.0%
! ATTGTATTGGAAGAGGGTTT+TGG - chr3_2:76806184-76806203 Msa0426430:intron 35.0%
! TTGTATTGGAAGAGGGTTTT+GGG - chr3_2:76806185-76806204 Msa0426430:intron 35.0%
GTTATGATATGGTCATTGAG+AGG - chr3_2:76806429-76806448 Msa0426430:intron 35.0%
TATGATATGGTCATTGAGAG+GGG - chr3_2:76806431-76806450 Msa0426430:intron 35.0%
TCATGACTCAACAGTAATAC+AGG + chr3_2:76806529-76806548 None:intergenic 35.0%
AAATCCTGACTAAACACAGT+GGG + chr3_2:76806590-76806609 None:intergenic 35.0%
AAAATCCTGACTAAACACAG+TGG + chr3_2:76806591-76806610 None:intergenic 35.0%
CATGTCTTGCTTATCAAAAC+AGG + chr3_2:76806714-76806733 None:intergenic 35.0%
AGACTCCTTATAACTTCATC+GGG + chr3_2:76807070-76807089 None:intergenic 35.0%
AAACAATATCCTTGAGTGAG+GGG + chr3_2:76807228-76807247 None:intergenic 35.0%
!!! CTGTATTTTTTCCTTGAGTG+AGG + chr3_2:76807272-76807291 None:intergenic 35.0%
TGTTGTTCAGATACATCAGA+CGG - chr3_2:76807395-76807414 Msa0426430:CDS 35.0%
! TTGAATCTGAGTCTCTAAAG+TGG - chr3_2:76807446-76807465 Msa0426430:CDS 35.0%
!! GTTTGATGATGTAAATGGGA+AGG - chr3_2:76807483-76807502 Msa0426430:CDS 35.0%
ATCAGAAATGGAGTACAACA+TGG + chr3_2:76807671-76807690 None:intergenic 35.0%
! CTGGACGTTTTTATCAGAAA+TGG + chr3_2:76807683-76807702 None:intergenic 35.0%
CATTTCTGATAAAAACGTCC+AGG - chr3_2:76807681-76807700 Msa0426430:intron 35.0%
! TCAGGTAACTTTTCTTGATG+TGG - chr3_2:76807713-76807732 Msa0426430:intron 35.0%
AGAAAACTCTTTCGTAAACG+CGG - chr3_2:76807752-76807771 Msa0426430:intron 35.0%
TGATTTCTCGTTATTAGTCC+TGG - chr3_2:76807895-76807914 Msa0426430:intron 35.0%
GATTTCTCGTTATTAGTCCT+GGG - chr3_2:76807896-76807915 Msa0426430:intron 35.0%
AAAATCAACAACATGATCCC+AGG + chr3_2:76807916-76807935 None:intergenic 35.0%
!! AAAGGATTTTAAGTGGGACA+TGG + chr3_2:76807954-76807973 None:intergenic 35.0%
CGTTCAACCATCTTCTTTAT+CGG - chr3_2:76808001-76808020 Msa0426430:intron 35.0%
TCTTTATCGGAATAAGAAGG+TGG - chr3_2:76808014-76808033 Msa0426430:intron 35.0%
! AGAGCTTGTAACTTCTTTTG+AGG - chr3_2:76808313-76808332 Msa0426430:intron 35.0%
! ATGTTGTTTGTATTGCAGTC+AGG + chr3_2:76808356-76808375 None:intergenic 35.0%
CATATATATAACCAGTGACC+AGG - chr3_2:76808373-76808392 Msa0426430:intron 35.0%
AGTAGGATATGATAAGATCC+TGG + chr3_2:76808394-76808413 None:intergenic 35.0%
GATTCGTTAACTGAAGGAAA+TGG - chr3_2:76808431-76808450 Msa0426430:intron 35.0%
ATACACATTGTGTGAGACAA+TGG - chr3_2:76808494-76808513 Msa0426430:intron 35.0%
TACACATTGTGTGAGACAAT+GGG - chr3_2:76808495-76808514 Msa0426430:intron 35.0%
GTCACCAGATCTGAAAATTT+AGG - chr3_2:76808547-76808566 Msa0426430:intron 35.0%
CTCAACTAACGAAAAACACA+TGG - chr3_2:76808630-76808649 Msa0426430:intron 35.0%
CAACTAACGAAAAACACATG+GGG - chr3_2:76808632-76808651 Msa0426430:intron 35.0%
AACTAACGAAAAACACATGG+GGG - chr3_2:76808633-76808652 Msa0426430:intron 35.0%
AAAAACACATGGGGGTTTAT+TGG - chr3_2:76808641-76808660 Msa0426430:intron 35.0%
! TTGGTGGTTATGAAGAAAGA+AGG - chr3_2:76808660-76808679 Msa0426430:intron 35.0%
TGCAGAAACTCATTTCAACT+TGG - chr3_2:76808707-76808726 Msa0426430:intron 35.0%
ACCAAAAGAATACCAACTCT+TGG - chr3_2:76808828-76808847 Msa0426430:intron 35.0%
TTAGCAGATCAAGTCAAAAC+CGG + chr3_2:76808863-76808882 None:intergenic 35.0%
AGGAGCAACTATGTTCATAA+AGG - chr3_2:76808968-76808987 Msa0426430:intron 35.0%
GATCGCAATGAAATCTATAC+GGG - chr3_2:76809229-76809248 Msa0426430:CDS 35.0%
! GTTGCCTTGTGTTTTCTTAT+TGG - chr3_2:76809309-76809328 Msa0426430:CDS 35.0%
CTAACGAACAAACTTTCACA+TGG + chr3_2:76809444-76809463 None:intergenic 35.0%
! GTGAAAGTTTGTTCGTTAGT+TGG - chr3_2:76809445-76809464 Msa0426430:five_prime_UTR 35.0%
! ATCTTTATGAAGTGCTATGC+TGG - chr3_2:76809474-76809493 Msa0426430:five_prime_UTR 35.0%
ATTACAACAGAAGCAACATC+TGG + chr3_2:76809507-76809526 None:intergenic 35.0%
TGAGTTTCATGAACGAACGA+AGG + chr3_2:76804836-76804855 None:intergenic 40.0%
! GTGAAGAATATGGAAGGTAC+CGG - chr3_2:76804936-76804955 Msa0426430:three_prime_UTR 40.0%
ATTCCGCAATATTCGTTTGC+AGG - chr3_2:76805139-76805158 Msa0426430:CDS 40.0%
TTTCGTGTTTCCATTTCACG+AGG - chr3_2:76805191-76805210 Msa0426430:CDS 40.0%
ACAAACTCAACCTCGTGAAA+TGG + chr3_2:76805204-76805223 None:intergenic 40.0%
! TTCACGAGGTTGAGTTTGTT+AGG - chr3_2:76805205-76805224 Msa0426430:CDS 40.0%
AAGCTATCATGGAGAGCTTA+TGG - chr3_2:76805450-76805469 Msa0426430:intron 40.0%
GCTGCATATGCTTATACTAG+TGG + chr3_2:76805696-76805715 None:intergenic 40.0%
TAGTATAAGCATATGCAGCC+TGG - chr3_2:76805697-76805716 Msa0426430:intron 40.0%
TGTGTCACCAATGTGACAAT+GGG - chr3_2:76805763-76805782 Msa0426430:intron 40.0%
!!! TTTGGATGGATGGTTTTGGA+GGG - chr3_2:76805838-76805857 Msa0426430:intron 40.0%
! TTTGGGAGTTGTGTTTTGCA+AGG + chr3_2:76805999-76806018 None:intergenic 40.0%
! CAAATCCTAAGGGTACGTTT+GGG + chr3_2:76806016-76806035 None:intergenic 40.0%
! ACAAATCCTAAGGGTACGTT+TGG + chr3_2:76806017-76806036 None:intergenic 40.0%
! GATTTGTTTGCGAGTTTGGA+GGG - chr3_2:76806030-76806049 Msa0426430:CDS 40.0%
ATTTGTTTGCGAGTTTGGAG+GGG - chr3_2:76806031-76806050 Msa0426430:CDS 40.0%
GAAACAGATGACATTGAGAG+GGG - chr3_2:76806098-76806117 Msa0426430:CDS 40.0%
TACAAAATCCTCCTCAGTTG+GGG - chr3_2:76806151-76806170 Msa0426430:intron 40.0%
GGGGAACTCAATGATTGTAT+TGG - chr3_2:76806171-76806190 Msa0426430:intron 40.0%
! TGTATTGGAAGAGGGTTTTG+GGG - chr3_2:76806186-76806205 Msa0426430:intron 40.0%
! CTTTGGAGGGTTGGAAATAT+AGG + chr3_2:76806360-76806379 None:intergenic 40.0%
GGGTTGAGAGAATACAGATT+GGG - chr3_2:76806451-76806470 Msa0426430:intron 40.0%
GGTTGAGAGAATACAGATTG+GGG - chr3_2:76806452-76806471 Msa0426430:intron 40.0%
GTTGAGAGAATACAGATTGG+GGG - chr3_2:76806453-76806472 Msa0426430:intron 40.0%
ATTTCCCACTGTGTTTAGTC+AGG - chr3_2:76806583-76806602 Msa0426430:intron 40.0%
TATGATACGCATGACCCAAA+AGG - chr3_2:76806805-76806824 Msa0426430:CDS 40.0%
!! ACCAGTTACTAGTTCTACCT+CGG + chr3_2:76806945-76806964 None:intergenic 40.0%
TCAGTCCCGATGAAGTTATA+AGG - chr3_2:76807062-76807081 Msa0426430:intron 40.0%
CCTTGTACTTCTGCATTTCA+GGG + chr3_2:76807158-76807177 None:intergenic 40.0%
TCCTTGTACTTCTGCATTTC+AGG + chr3_2:76807159-76807178 None:intergenic 40.0%
GTTGTTCAGATACATCAGAC+GGG - chr3_2:76807396-76807415 Msa0426430:CDS 40.0%
TTGTTCAGATACATCAGACG+GGG - chr3_2:76807397-76807416 Msa0426430:CDS 40.0%
TCATCAAACTCTACGAAACC+TGG + chr3_2:76807472-76807491 None:intergenic 40.0%
TCACATACTCTGCTCAAGAT+AGG - chr3_2:76807509-76807528 Msa0426430:CDS 40.0%
! TCCTGAAACTTCTTTTGCCA+GGG - chr3_2:76807544-76807563 Msa0426430:intron 40.0%
GTTACCTGATCTTAATCTCC+TGG + chr3_2:76807702-76807721 None:intergenic 40.0%
TCGTAAACGCGGTTTATAGT+TGG - chr3_2:76807763-76807782 Msa0426430:intron 40.0%
CAGTACCGTCTTCTATTGAA+AGG + chr3_2:76807972-76807991 None:intergenic 40.0%
AAGAAGTTACAAGCTCTCCA+CGG + chr3_2:76808310-76808329 None:intergenic 40.0%
TATGATAAGATCCTGGTCAC+TGG + chr3_2:76808387-76808406 None:intergenic 40.0%
TCTGACGATTCGTTAACTGA+AGG - chr3_2:76808425-76808444 Msa0426430:intron 40.0%
ATGATGCCAAAGAGTCAGTT+TGG + chr3_2:76808804-76808823 None:intergenic 40.0%
!!! GCCAAGAGTTGGTATTCTTT+TGG + chr3_2:76808832-76808851 None:intergenic 40.0%
!!! CAACTCTTGGCTCTTTTTTC+CGG - chr3_2:76808841-76808860 Msa0426430:intron 40.0%
!! TTCATAAAGGCAGTACTGAC+AGG - chr3_2:76808981-76809000 Msa0426430:intron 40.0%
! GCTCTGCTAATTTTATGCAG+CGG - chr3_2:76809003-76809022 Msa0426430:intron 40.0%
! CTCTGCTAATTTTATGCAGC+GGG - chr3_2:76809004-76809023 Msa0426430:intron 40.0%
AGCAAGCAATAGTTCTCCAA+TGG - chr3_2:76809078-76809097 Msa0426430:intron 40.0%
! GAAAGCATGTCTCCAAAATG+AGG - chr3_2:76809155-76809174 Msa0426430:intron 40.0%
GGTAATATCTTCCAAGGCTT+CGG + chr3_2:76809191-76809210 None:intergenic 40.0%
ATCTTCGTCATAGAAGAGAG+CGG + chr3_2:76809212-76809231 None:intergenic 40.0%
ATCTATACGGGAAATAGGCA+CGG - chr3_2:76809241-76809260 Msa0426430:CDS 40.0%
ATTGTATGAACATTCGGGAG+CGG - chr3_2:76809366-76809385 Msa0426430:CDS 40.0%
GTTACATTAATGGAGCAGCT+TGG - chr3_2:76809532-76809551 Msa0426430:five_prime_UTR 40.0%
AGATGAATTAGGAAGAGGGT+TGG + chr3_2:76809585-76809604 None:intergenic 40.0%
AGGAACGAGAGAACGAAAAG+AGG + chr3_2:76804816-76804835 None:intergenic 45.0%
CTGTGAGGTGGTGAAGAATA+TGG - chr3_2:76804926-76804945 Msa0426430:three_prime_UTR 45.0%
GAGGTGGTGAAGAATATGGA+AGG - chr3_2:76804930-76804949 Msa0426430:three_prime_UTR 45.0%
!! AGGTACCGGAAGAAGAATCA+CGG - chr3_2:76804950-76804969 Msa0426430:three_prime_UTR 45.0%
ACTGACCGTGATTCTTCTTC+CGG + chr3_2:76804958-76804977 None:intergenic 45.0%
! ACTAAAAGCACGATCACGCT+TGG + chr3_2:76805099-76805118 None:intergenic 45.0%
GAATACAAGCATCAGACACC+AGG + chr3_2:76805718-76805737 None:intergenic 45.0%
GTGTGTCACCAATGTGACAA+TGG - chr3_2:76805762-76805781 Msa0426430:intron 45.0%
! TCGTAGTGTTGGGGTATGTT+TGG - chr3_2:76805820-76805839 Msa0426430:intron 45.0%
! AGTGTTGGGGTATGTTTGGA+TGG - chr3_2:76805824-76805843 Msa0426430:intron 45.0%
TTGGGGTATGTTTGGATGGA+TGG - chr3_2:76805828-76805847 Msa0426430:intron 45.0%
!!! GTTTGGATGGATGGTTTTGG+AGG - chr3_2:76805837-76805856 Msa0426430:intron 45.0%
!!! TTGGATGGATGGTTTTGGAG+GGG - chr3_2:76805839-76805858 Msa0426430:intron 45.0%
! GGATTTGTTTGCGAGTTTGG+AGG - chr3_2:76806029-76806048 Msa0426430:CDS 45.0%
TTTGTTTGCGAGTTTGGAGG+GGG - chr3_2:76806032-76806051 Msa0426430:CDS 45.0%
GGAAAAAAGGAAGGAGCAAG+TGG - chr3_2:76806073-76806092 Msa0426430:CDS 45.0%
ACAAAATCCTCCTCAGTTGG+GGG - chr3_2:76806152-76806171 Msa0426430:intron 45.0%
!! GTATTGGAAGAGGGTTTTGG+GGG - chr3_2:76806187-76806206 Msa0426430:intron 45.0%
!!! TATTGGAAGAGGGTTTTGGG+GGG - chr3_2:76806188-76806207 Msa0426430:intron 45.0%
CTTTGTATGGGAGTTTGGAG+GGG + chr3_2:76806392-76806411 None:intergenic 45.0%
GCTTTGTATGGGAGTTTGGA+GGG + chr3_2:76806393-76806412 None:intergenic 45.0%
! GAAGGCTTTGTATGGGAGTT+TGG + chr3_2:76806397-76806416 None:intergenic 45.0%
GGGGTTGAGAGAATACAGAT+TGG - chr3_2:76806450-76806469 Msa0426430:intron 45.0%
AATGGCAATACCACAGACGA+AGG + chr3_2:76806832-76806851 None:intergenic 45.0%
! CCCTGAAATGCAGAAGTACA+AGG - chr3_2:76807155-76807174 Msa0426430:CDS 45.0%
TCCTTGAGTGAGGGTAGTAA+GGG + chr3_2:76807262-76807281 None:intergenic 45.0%
TTCCTTGAGTGAGGGTAGTA+AGG + chr3_2:76807263-76807282 None:intergenic 45.0%
AAAAGAGCAAAGCCAGCATC+TGG + chr3_2:76807427-76807446 None:intergenic 45.0%
! GTCCTGAAACTTCTTTTGCC+AGG - chr3_2:76807543-76807562 Msa0426430:intron 45.0%
ACCCTGGCAAAAGAAGTTTC+AGG + chr3_2:76807548-76807567 None:intergenic 45.0%
ACGTCCAGGAGATTAAGATC+AGG - chr3_2:76807695-76807714 Msa0426430:intron 45.0%
! ACGCGGTTTATAGTTGGTCT+TGG - chr3_2:76807769-76807788 Msa0426430:intron 45.0%
CAGTACGGTTTCGAAATGTC+AGG + chr3_2:76808271-76808290 None:intergenic 45.0%
GACATTTCGAAACCGTACTG+TGG - chr3_2:76808271-76808290 Msa0426430:intron 45.0%
GTCAGAATCAGCTTTGCAGT+AGG + chr3_2:76808411-76808430 None:intergenic 45.0%
AACACATGGGGGTTTATTGG+TGG - chr3_2:76808644-76808663 Msa0426430:intron 45.0%
CGGAAAAAAGAGCCAAGAGT+TGG + chr3_2:76808843-76808862 None:intergenic 45.0%
AGTTGCTGTGACAGTTCTTC+AGG - chr3_2:76809109-76809128 Msa0426430:intron 45.0%
GAGAGCGGTAATATCTTCCA+AGG + chr3_2:76809197-76809216 None:intergenic 45.0%
TTCACATGGCGTACATGACA+AGG + chr3_2:76809430-76809449 None:intergenic 45.0%
!!! ATTTTTTTAAAATATCAAAT+AGG - chr3_2:76805954-76805973 Msa0426430:CDS 5.0%
GTCAGTCCTAGACCTTGTTG+CGG - chr3_2:76804972-76804991 Msa0426430:three_prime_UTR 50.0%
GTGGTAAGTATGGGCCTCTT+TGG + chr3_2:76805578-76805597 None:intergenic 50.0%
CAACTCCCAAACGTACCCTT+AGG - chr3_2:76806008-76806027 Msa0426430:CDS 50.0%
AGGGGCTTGGGAAAAAAGGA+AGG - chr3_2:76806064-76806083 Msa0426430:CDS 50.0%
CAGATGACATTGAGAGGGGA+AGG - chr3_2:76806102-76806121 Msa0426430:CDS 50.0%
TCATTGAGTTCCCCCAACTG+AGG + chr3_2:76806165-76806184 None:intergenic 50.0%
!!! AAGAGGGTTTTGGGGGGTTT+TGG - chr3_2:76806194-76806213 Msa0426430:intron 50.0%
! GGCTTTGTATGGGAGTTTGG+AGG + chr3_2:76806394-76806413 None:intergenic 50.0%
AGACAGGGCACAACATGTGA+GGG + chr3_2:76806762-76806781 None:intergenic 50.0%
ACATGTTGTGCCCTGTCTGA+TGG - chr3_2:76806764-76806783 Msa0426430:intron 50.0%
! CCACAGACGAAGGACCTTTT+GGG + chr3_2:76806822-76806841 None:intergenic 50.0%
! ACCACAGACGAAGGACCTTT+TGG + chr3_2:76806823-76806842 None:intergenic 50.0%
! GTTTTCGCTCTCGCACAATC+TGG - chr3_2:76806901-76806920 Msa0426430:CDS 50.0%
GCCGAGGTAGAACTAGTAAC+TGG - chr3_2:76806941-76806960 Msa0426430:intron 50.0%
TGAGTGAGGGTAGTAAGGGA+AGG + chr3_2:76807258-76807277 None:intergenic 50.0%
TCCCTTACTACCCTCACTCA+AGG - chr3_2:76807258-76807277 Msa0426430:CDS 50.0%
!! TCTGAGTCTCTAAAGTGGCC+AGG - chr3_2:76807451-76807470 Msa0426430:CDS 50.0%
AGTTCCACACAGCCACAGTA+CGG + chr3_2:76808286-76808305 None:intergenic 50.0%
!! CTTTTGAGGACCACCTCTTG+TGG - chr3_2:76808327-76808346 Msa0426430:intron 50.0%
CAGCAACTGCACTTGTCCAT+TGG + chr3_2:76809097-76809116 None:intergenic 50.0%
TGCTGTGACAGTTCTTCAGG+CGG - chr3_2:76809112-76809131 Msa0426430:intron 50.0%
! GGCAACTGTGCTCCTCATTT+TGG + chr3_2:76809170-76809189 None:intergenic 50.0%
!! TCGCGTCGACTCTGACTCTT+CGG + chr3_2:76804998-76805017 None:intergenic 55.0%
AGAGTCGACGCGAAGAAGAC+CGG - chr3_2:76805005-76805024 Msa0426430:three_prime_UTR 55.0%
GCGGAATCGTTCTTGCGCAT+CGG + chr3_2:76805126-76805145 None:intergenic 55.0%
!!! GATGGATGGTTTTGGAGGGG+AGG - chr3_2:76805842-76805861 Msa0426430:intron 55.0%
!!! TGGTTTTGGAGGGGAGGAGA+AGG - chr3_2:76805848-76805867 Msa0426430:intron 55.0%
TTTGCGAGTTTGGAGGGGGA+GGG - chr3_2:76806036-76806055 Msa0426430:CDS 55.0%
! ACATTGAGAGGGGAAGGCGT+TGG - chr3_2:76806108-76806127 Msa0426430:CDS 55.0%
!! CATTGAGAGGGGAAGGCGTT+GGG - chr3_2:76806109-76806128 Msa0426430:CDS 55.0%
!! ATTGAGAGGGGAAGGCGTTG+GGG - chr3_2:76806110-76806129 Msa0426430:CDS 55.0%
TTGAGTTCCCCCAACTGAGG+AGG + chr3_2:76806162-76806181 None:intergenic 55.0%
!!! AGGGTTTTGGGGGGTTTTGG+AGG - chr3_2:76806197-76806216 Msa0426430:intron 55.0%
!!! GGGTTTTGGGGGGTTTTGGA+GGG - chr3_2:76806198-76806217 Msa0426430:intron 55.0%
TATGGGAGTTTGGAGGGGAG+GGG + chr3_2:76806387-76806406 None:intergenic 55.0%
GTATGGGAGTTTGGAGGGGA+GGG + chr3_2:76806388-76806407 None:intergenic 55.0%
TGTATGGGAGTTTGGAGGGG+AGG + chr3_2:76806389-76806408 None:intergenic 55.0%
CAGACAGGGCACAACATGTG+AGG + chr3_2:76806763-76806782 None:intergenic 55.0%
CCCAAAAGGTCCTTCGTCTG+TGG - chr3_2:76806819-76806838 Msa0426430:CDS 55.0%
GTTTGTGCAGCATTCAGCCG+AGG - chr3_2:76806925-76806944 Msa0426430:intron 55.0%
TCCTTGAGTGAGGGGAGTGA+GGG + chr3_2:76807220-76807239 None:intergenic 55.0%
ATCCTTGAGTGAGGGGAGTG+AGG + chr3_2:76807221-76807240 None:intergenic 55.0%
AGACGGGGTAAACCAGATGC+TGG - chr3_2:76807412-76807431 Msa0426430:CDS 55.0%
GAAACCGTACTGTGGCTGTG+TGG - chr3_2:76808279-76808298 Msa0426430:intron 55.0%
AGTCAGGATGCCACAAGAGG+TGG + chr3_2:76808340-76808359 None:intergenic 55.0%
TGCAGTCAGGATGCCACAAG+AGG + chr3_2:76808343-76808362 None:intergenic 55.0%
! GGCACGGTCTAGTTCATGTC+TGG - chr3_2:76809257-76809276 Msa0426430:CDS 55.0%
CTTCGGCCGCAACAAGGTCT+AGG + chr3_2:76804981-76805000 None:intergenic 60.0%
CTGACTCTTCGGCCGCAACA+AGG + chr3_2:76804987-76805006 None:intergenic 60.0%
GTTTGCGAGTTTGGAGGGGG+AGG - chr3_2:76806035-76806054 Msa0426430:CDS 60.0%
GGGGAGGGGCTTGGGAAAAA+AGG - chr3_2:76806060-76806079 Msa0426430:CDS 60.0%
!! TTGAGAGGGGAAGGCGTTGG+GGG - chr3_2:76806111-76806130 Msa0426430:CDS 60.0%
!! AGGGGAAGGCTTTGGAGGGT+TGG + chr3_2:76806369-76806388 None:intergenic 60.0%
TGAGTGAGGGGAGTGAGGGT+AGG + chr3_2:76807216-76807235 None:intergenic 60.0%
ACCCTCACTCCCCTCACTCA+AGG - chr3_2:76807216-76807235 Msa0426430:CDS 60.0%
GTGGCTGTGTGGAACTTCCG+TGG - chr3_2:76808290-76808309 Msa0426430:intron 60.0%
GAGCACAGTTGCCGAAGCCT+TGG - chr3_2:76809177-76809196 Msa0426430:CDS 60.0%
GACGCGAAGAAGACCGGTCG+CGG - chr3_2:76805011-76805030 Msa0426430:three_prime_UTR 65.0%
CGAGTTTGGAGGGGGAGGGA+GGG - chr3_2:76806040-76806059 Msa0426430:CDS 65.0%
GAGTTTGGAGGGGGAGGGAG+GGG - chr3_2:76806041-76806060 Msa0426430:CDS 65.0%
!! GGGGAGGGGAAGGCTTTGGA+GGG + chr3_2:76806373-76806392 None:intergenic 65.0%
! AGGGGAGGGGAAGGCTTTGG+AGG + chr3_2:76806374-76806393 None:intergenic 65.0%
TGGAGGGGAGGGGAAGGCTT+TGG + chr3_2:76806377-76806396 None:intergenic 65.0%
GGAGTTTGGAGGGGAGGGGA+AGG + chr3_2:76806383-76806402 None:intergenic 65.0%
GCGAAGAAGACCGGTCGCGG+TGG - chr3_2:76805014-76805033 Msa0426430:three_prime_UTR 70.0%
GACCGGTCGCGGTGGTCGAA+CGG - chr3_2:76805022-76805041 Msa0426430:three_prime_UTR 70.0%
CACCGTTCGACCACCGCGAC+CGG + chr3_2:76805027-76805046 None:intergenic 70.0%
CGCGGTGGTCGAACGGTGGA+TGG - chr3_2:76805029-76805048 Msa0426430:exon 70.0%
GCGAGTTTGGAGGGGGAGGG+AGG - chr3_2:76806039-76806058 Msa0426430:CDS 70.0%
TTTGGAGGGGGAGGGAGGGG+AGG - chr3_2:76806044-76806063 Msa0426430:CDS 70.0%
TTGGAGGGGGAGGGAGGGGA+GGG - chr3_2:76806045-76806064 Msa0426430:CDS 70.0%
CGGTCGCGGTGGTCGAACGG+TGG - chr3_2:76805025-76805044 Msa0426430:three_prime_UTR 75.0%
TGGAGGGGGAGGGAGGGGAG+GGG - chr3_2:76806046-76806065 Msa0426430:CDS 75.0%
GGGAGGGAGGGGAGGGGCTT+GGG - chr3_2:76806052-76806071 Msa0426430:CDS 75.0%
! GGGGAGGGAGGGGAGGGGCT+TGG - chr3_2:76806051-76806070 Msa0426430:CDS 80.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 76804716 76809619 76804716 ID=Msa0426430;Name=Msa0426430
chr3_2 mRNA 76804716 76809619 76804716 ID=Msa0426430-mRNA-1;Parent=Msa0426430;Name=Msa0426430-mRNA-1;_AED=0.28;_eAED=0.28;_QI=229|1|1|1|1|1|8|331|483
chr3_2 exon 76804716 76805312 76804716 ID=Msa0426430-mRNA-1:exon:19976;Parent=Msa0426430-mRNA-1
chr3_2 exon 76805883 76806153 76805883 ID=Msa0426430-mRNA-1:exon:19975;Parent=Msa0426430-mRNA-1
chr3_2 exon 76806231 76806423 76806231 ID=Msa0426430-mRNA-1:exon:19974;Parent=Msa0426430-mRNA-1
chr3_2 exon 76806619 76806699 76806619 ID=Msa0426430-mRNA-1:exon:19973;Parent=Msa0426430-mRNA-1
chr3_2 exon 76806805 76806930 76806805 ID=Msa0426430-mRNA-1:exon:19972;Parent=Msa0426430-mRNA-1
chr3_2 exon 76807153 76807303 76807153 ID=Msa0426430-mRNA-1:exon:19971;Parent=Msa0426430-mRNA-1
chr3_2 exon 76807389 76807536 76807389 ID=Msa0426430-mRNA-1:exon:19970;Parent=Msa0426430-mRNA-1
chr3_2 exon 76809175 76809619 76809175 ID=Msa0426430-mRNA-1:exon:19969;Parent=Msa0426430-mRNA-1
chr3_2 five_prime_UTR 76809391 76809619 76809391 ID=Msa0426430-mRNA-1:five_prime_utr;Parent=Msa0426430-mRNA-1
chr3_2 CDS 76809175 76809390 76809175 ID=Msa0426430-mRNA-1:cds;Parent=Msa0426430-mRNA-1
chr3_2 CDS 76807389 76807536 76807389 ID=Msa0426430-mRNA-1:cds;Parent=Msa0426430-mRNA-1
chr3_2 CDS 76807153 76807303 76807153 ID=Msa0426430-mRNA-1:cds;Parent=Msa0426430-mRNA-1
chr3_2 CDS 76806805 76806930 76806805 ID=Msa0426430-mRNA-1:cds;Parent=Msa0426430-mRNA-1
chr3_2 CDS 76806619 76806699 76806619 ID=Msa0426430-mRNA-1:cds;Parent=Msa0426430-mRNA-1
chr3_2 CDS 76806231 76806423 76806231 ID=Msa0426430-mRNA-1:cds;Parent=Msa0426430-mRNA-1
chr3_2 CDS 76805883 76806153 76805883 ID=Msa0426430-mRNA-1:cds;Parent=Msa0426430-mRNA-1
chr3_2 CDS 76805047 76805312 76805047 ID=Msa0426430-mRNA-1:cds;Parent=Msa0426430-mRNA-1
chr3_2 three_prime_UTR 76804716 76805046 76804716 ID=Msa0426430-mRNA-1:three_prime_utr;Parent=Msa0426430-mRNA-1
Gene Sequence

>Msa0426430

ATGGAAGGTACCGGAAGAAGAATCACGGTCAGTCCTAGACCTTGTTGCGGCCGAAGAGTCAGAGTCGACGCGAAGAAGACCGGTCGCGGTGGTCGAACGGTGGATGGATTTGTTAACAGCGTTAAGAAGCTTCAGAGACGCGAAATTAGCTCCAAGCGTGATCGTGCTTTTAGTATGACCGATGCGCAAGAACGATTCCGCAATATTCGTTTGCAGGAGGAATATGATACGCATGACCCAAAAGGTCCTTCGTCTGTGGTATTGCCATTTCTGAGAAAAAGATCAAAGATTATTGAGATTGTGGCAGCACAAGACATTGTTTTCGCTCTCGCACAATCTGGTGTTTGTGCAGCATTCAGCCGAGAAAGCAATCAAAGAATATGCTTTTTGAATGTCAGTCCCGATGAAGTTATAAGGAGTCTATTTTATAACAAAAATAATGACTCGCTTATCACAGTTTCTGTCTATGCATCAGACAGTTACAGTTCCCTGAAATGCAGAAGTACAAGGATTGAATACATCAGACGGGGTAAACCAGATGCTGGCTTTGCTCTTTTTGAATCTGAGTCTCTAAAGTGGCCAGGTTTCGTAGAGTTTGATGATGTAAATGGGAAGGTACTCACATACTCTGCTCAAGATAGCATATACAAGGTATTTGACCTGAAAAACTATACCATGTTGTACTCCATTTCTGATAAAAACGTCCAGGAGATTAAGATCAGTCCTGGGATCATGTTGTTGATTTTTGCTAAAGCAAGTAGCCATGTCCCACTTAAAATCCTTTCAATAGAAGACGGTACTGTTTTGAAATCGTTCAACCATCTTCTTTATCGGAATAAGAAGGTGGATTTTATCGAACAGTTCAACGAAAAGCTCCTTGTCAAGCAAGAAAATGAAAACCTTCAAATTCTTGATGTGCGTACTTTTGAGCTGACAGAAGTTAGCAGAAGTGAATTTATGACACCTTCTGCATTTATCTTTCTTTATGAGAACCAATTATTCCTGACATTTCGAAACCGTACTGTGGCTGTGTGGAACTTCCGTGGAGAGCTTGTAACTTCTTTTGAGGACCACCTCTTGTGGCATCCTGACTGCAATACAAACAACATATATATAACCAGTGACCAGGATCTTATCATATCCTACTGCAAAGCTGATTCTGACGATTCGTTAACTGAAGGAAATGCGGGTTCCATCAATGTCAGCAACATTTTATCTGGCAAGTGTCTTGCCAAAATAAGAGCAAGCAATAGTTCTCCAATGGACAAGTGCAGTTGCTGTGACAGTTCTTCAGGCGGAAGTTGTAATTCAAGAAAGCGAAAGCATGTCTCCAAAATGAGGAGCACAGTTGCCGAAGCCTTGGAAGATATTACCGCTCTCTTCTATGACGAAGATCGCAATGAAATCTATACGGGAAATAGGCACGGTCTAGTTCATGTCTGGTCTAACTGA

Protein sequence

>Msa0426430

MEGTGRRITVSPRPCCGRRVRVDAKKTGRGGRTVDGFVNSVKKLQRREISSKRDRAFSMTDAQERFRNIRLQEEYDTHDPKGPSSVVLPFLRKRSKIIEIVAAQDIVFALAQSGVCAAFSRESNQRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDSYSSLKCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDKNVQEIKISPGIMLLIFAKASSHVPLKILSIEDGTVLKSFNHLLYRNKKVDFIEQFNEKLLVKQENENLQILDVRTFELTEVSRSEFMTPSAFIFLYENQLFLTFRNRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDSLTEGNAGSINVSNILSGKCLAKIRASNSSPMDKCSCCDSSSGGSCNSRKRKHVSKMRSTVAEALEDITALFYDEDRNEIYTGNRHGLVHVWSN*