Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0186410 | XP_013462262.1 | 94.578 | 498 | 11 | 1 | 1 | 482 | 1 | 498 | 0.0 | 980 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0186410 | sp|Q949U4|OFT16_ARATH | 69.478 | 498 | 130 | 3 | 1 | 482 | 1 | 492 | 0.0 | 733 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0186410 | A0A072V388 | 94.578 | 498 | 11 | 1 | 1 | 482 | 1 | 498 | 0.0 | 980 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0076170 | Msa0186410 | 0.803047 | 4.199384e-49 | -8.615850e-47 |
Msa0104140 | Msa0186410 | 0.819732 | 9.953159e-53 | -8.615850e-47 |
Msa0140880 | Msa0186410 | 0.822697 | 2.061626e-53 | -8.615850e-47 |
Msa0186410 | Msa0268110 | 0.822566 | 2.211447e-53 | -8.615850e-47 |
Msa0186410 | Msa0309720 | 0.803206 | 3.893653e-49 | -8.615850e-47 |
Msa0186410 | Msa0369420 | 0.803948 | 2.732117e-49 | -8.615850e-47 |
Msa0186410 | Msa0385830 | 0.899655 | 1.597836e-77 | -8.615850e-47 |
Msa0186410 | Msa0523290 | 0.866592 | 2.547408e-65 | -8.615850e-47 |
Msa0186410 | Msa0586450 | 0.818850 | 1.580719e-52 | -8.615850e-47 |
Msa0186410 | Msa0626270 | 0.805541 | 1.270045e-49 | -8.615850e-47 |
Msa0186410 | Msa0626460 | 0.827160 | 1.824091e-54 | -8.615850e-47 |
Msa0186410 | Msa0664540 | 0.801068 | 1.072152e-48 | -8.615850e-47 |
Msa0186410 | Msa0784220 | 0.813957 | 1.967673e-51 | -8.615850e-47 |
Msa0186410 | Msa1031390 | 0.801662 | 8.100571e-49 | -8.615850e-47 |
Msa0186410 | Msa1165090 | 0.817380 | 3.398254e-52 | -8.615850e-47 |
Msa0186410 | Msa1219830 | 0.823442 | 1.382291e-53 | -8.615850e-47 |
Msa0186410 | Msa1267040 | 0.820784 | 5.711135e-53 | -8.615850e-47 |
Msa0186410 | Msa1267170 | 0.817116 | 3.897202e-52 | -8.615850e-47 |
Msa0186410 | Msa1393820 | 0.800399 | 1.467987e-48 | -8.615850e-47 |
Msa0186410 | Msa1440900 | 0.810696 | 1.013770e-50 | -8.615850e-47 |
Msa0186410 | Msa1460880 | 0.822514 | 2.274958e-53 | -8.615850e-47 |
Msa0186410 | Msa1464370 | 0.829121 | 6.146389e-55 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0186410 | MtrunA17_Chr3g0143821 | 94.578 | 498 | 11 | 1 | 1 | 482 | 1 | 498 | 0.0 | 980 |
Msa0186410 | MtrunA17_Chr5g0448581 | 63.410 | 481 | 148 | 4 | 22 | 485 | 39 | 508 | 0.0 | 638 |
Msa0186410 | MtrunA17_Chr4g0056061 | 61.017 | 413 | 143 | 3 | 82 | 477 | 79 | 490 | 0.0 | 525 |
Msa0186410 | MtrunA17_Chr5g0399311 | 55.485 | 474 | 180 | 6 | 22 | 477 | 46 | 506 | 0.0 | 521 |
Msa0186410 | MtrunA17_Chr3g0129981 | 38.008 | 492 | 236 | 15 | 26 | 476 | 48 | 511 | 5.82e-94 | 294 |
Msa0186410 | MtrunA17_Chr4g0042711 | 42.607 | 399 | 194 | 10 | 112 | 479 | 98 | 492 | 4.70e-91 | 286 |
Msa0186410 | MtrunA17_Chr3g0077321 | 38.657 | 432 | 228 | 10 | 84 | 482 | 123 | 550 | 4.16e-90 | 286 |
Msa0186410 | MtrunA17_Chr1g0160781 | 36.526 | 449 | 244 | 10 | 26 | 439 | 66 | 508 | 4.40e-90 | 285 |
Msa0186410 | MtrunA17_Chr5g0426591 | 40.135 | 446 | 231 | 10 | 16 | 431 | 11 | 450 | 7.30e-90 | 284 |
Msa0186410 | MtrunA17_Chr4g0008451 | 38.967 | 426 | 226 | 10 | 82 | 479 | 205 | 624 | 2.41e-89 | 286 |
Msa0186410 | MtrunA17_Chr6g0455571 | 42.677 | 396 | 195 | 10 | 110 | 475 | 114 | 507 | 2.92e-89 | 282 |
Msa0186410 | MtrunA17_Chr5g0417871 | 41.162 | 396 | 202 | 8 | 112 | 478 | 86 | 479 | 6.19e-89 | 280 |
Msa0186410 | MtrunA17_Chr4g0043911 | 41.053 | 380 | 186 | 8 | 95 | 442 | 139 | 512 | 1.20e-88 | 282 |
Msa0186410 | MtrunA17_Chr3g0132371 | 40.858 | 443 | 209 | 12 | 83 | 484 | 116 | 546 | 4.48e-88 | 280 |
Msa0186410 | MtrunA17_Chr4g0061781 | 41.772 | 395 | 200 | 8 | 110 | 475 | 115 | 508 | 1.11e-86 | 275 |
Msa0186410 | MtrunA17_Chr2g0307971 | 37.978 | 445 | 234 | 11 | 82 | 485 | 76 | 519 | 2.38e-85 | 272 |
Msa0186410 | MtrunA17_Chr4g0070551 | 38.443 | 424 | 227 | 11 | 82 | 477 | 201 | 618 | 4.31e-84 | 271 |
Msa0186410 | MtrunA17_Chr5g0436321 | 38.235 | 408 | 220 | 9 | 112 | 491 | 162 | 565 | 9.04e-84 | 269 |
Msa0186410 | MtrunA17_Chr3g0123521 | 39.348 | 399 | 206 | 10 | 112 | 476 | 151 | 547 | 1.85e-83 | 268 |
Msa0186410 | MtrunA17_Chr5g0424241 | 40.000 | 375 | 193 | 6 | 95 | 437 | 141 | 515 | 2.93e-80 | 261 |
Msa0186410 | MtrunA17_Chr2g0284071 | 36.139 | 404 | 198 | 8 | 104 | 447 | 208 | 611 | 1.54e-78 | 258 |
Msa0186410 | MtrunA17_Chr1g0204121 | 37.972 | 424 | 232 | 11 | 82 | 480 | 61 | 478 | 1.30e-77 | 251 |
Msa0186410 | MtrunA17_Chr5g0412251 | 34.152 | 448 | 238 | 11 | 82 | 477 | 60 | 502 | 1.33e-74 | 243 |
Msa0186410 | MtrunA17_Chr1g0204141 | 37.063 | 429 | 232 | 14 | 82 | 480 | 61 | 481 | 2.92e-73 | 240 |
Msa0186410 | MtrunA17_Chr3g0087291 | 36.818 | 440 | 232 | 15 | 77 | 483 | 137 | 563 | 4.72e-72 | 238 |
Msa0186410 | MtrunA17_Chr4g0075311 | 34.803 | 431 | 213 | 9 | 81 | 447 | 136 | 562 | 9.82e-70 | 233 |
Msa0186410 | MtrunA17_Chr3g0132951 | 34.375 | 416 | 217 | 10 | 114 | 476 | 103 | 515 | 5.81e-69 | 229 |
Msa0186410 | MtrunA17_Chr4g0010511 | 34.025 | 482 | 252 | 12 | 29 | 479 | 173 | 619 | 6.33e-67 | 226 |
Msa0186410 | MtrunA17_Chr4g0003561 | 29.189 | 370 | 208 | 9 | 82 | 420 | 47 | 393 | 6.53e-43 | 157 |
Msa0186410 | MtrunA17_Chr7g0220381 | 32.174 | 345 | 188 | 11 | 64 | 371 | 55 | 390 | 8.36e-41 | 155 |
Msa0186410 | MtrunA17_Chr1g0146501 | 30.606 | 330 | 190 | 11 | 77 | 371 | 57 | 382 | 8.50e-29 | 120 |
Msa0186410 | MtrunA17_Chr3g0127811 | 31.164 | 292 | 160 | 9 | 110 | 371 | 62 | 342 | 1.85e-26 | 112 |
Msa0186410 | MtrunA17_Chr4g0002361 | 27.089 | 347 | 191 | 12 | 103 | 422 | 78 | 389 | 1.65e-22 | 99.8 |
Msa0186410 | MtrunA17_Chr2g0298881 | 27.410 | 332 | 187 | 11 | 114 | 423 | 38 | 337 | 7.46e-22 | 97.1 |
Msa0186410 | MtrunA17_Chr7g0240241 | 39.394 | 132 | 56 | 4 | 269 | 377 | 1 | 131 | 2.09e-15 | 72.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0186410 | AT1G76270.1 | 69.478 | 498 | 130 | 3 | 1 | 482 | 1 | 492 | 0.0 | 733 |
Msa0186410 | AT1G20550.1 | 69.721 | 502 | 127 | 5 | 1 | 483 | 1 | 496 | 0.0 | 726 |
Msa0186410 | AT4G38390.1 | 62.656 | 482 | 153 | 4 | 19 | 483 | 41 | 512 | 0.0 | 633 |
Msa0186410 | AT4G16650.2 | 59.338 | 423 | 152 | 4 | 82 | 485 | 93 | 514 | 7.65e-170 | 490 |
Msa0186410 | AT4G16650.1 | 59.338 | 423 | 152 | 4 | 82 | 485 | 93 | 514 | 7.65e-170 | 490 |
Msa0186410 | AT5G15740.1 | 40.138 | 436 | 218 | 11 | 82 | 475 | 64 | 498 | 1.71e-91 | 288 |
Msa0186410 | AT5G64600.1 | 35.306 | 507 | 269 | 13 | 23 | 482 | 26 | 520 | 4.98e-91 | 287 |
Msa0186410 | AT2G01480.1 | 37.307 | 453 | 241 | 11 | 26 | 442 | 71 | 516 | 1.88e-87 | 279 |
Msa0186410 | AT2G01480.2 | 37.387 | 444 | 236 | 10 | 26 | 433 | 71 | 508 | 2.35e-87 | 278 |
Msa0186410 | AT3G02250.1 | 39.344 | 427 | 222 | 11 | 84 | 475 | 74 | 498 | 9.16e-87 | 276 |
Msa0186410 | AT2G03280.1 | 39.394 | 429 | 217 | 11 | 88 | 475 | 54 | 480 | 1.90e-86 | 274 |
Msa0186410 | AT1G22460.1 | 40.183 | 438 | 215 | 14 | 83 | 482 | 135 | 563 | 2.61e-86 | 276 |
Msa0186410 | AT1G14020.1 | 37.868 | 441 | 228 | 10 | 82 | 481 | 53 | 488 | 7.05e-86 | 273 |
Msa0186410 | AT1G35510.1 | 38.164 | 414 | 222 | 8 | 105 | 485 | 153 | 565 | 7.48e-86 | 275 |
Msa0186410 | AT2G37980.1 | 37.200 | 500 | 250 | 17 | 27 | 479 | 136 | 618 | 1.23e-84 | 274 |
Msa0186410 | AT5G35570.1 | 39.294 | 425 | 224 | 11 | 83 | 479 | 225 | 643 | 4.45e-84 | 273 |
Msa0186410 | AT3G26370.1 | 39.250 | 400 | 207 | 10 | 112 | 477 | 159 | 556 | 2.13e-83 | 268 |
Msa0186410 | AT1G14970.3 | 40.678 | 354 | 178 | 7 | 112 | 433 | 10 | 363 | 5.75e-83 | 263 |
Msa0186410 | AT3G54100.1 | 37.939 | 427 | 229 | 11 | 82 | 479 | 195 | 614 | 5.98e-83 | 269 |
Msa0186410 | AT1G38065.1 | 39.947 | 378 | 194 | 7 | 102 | 447 | 27 | 403 | 6.00e-83 | 265 |
Msa0186410 | AT1G14970.2 | 40.678 | 354 | 178 | 7 | 112 | 433 | 36 | 389 | 1.18e-82 | 263 |
Msa0186410 | AT1G38065.2 | 39.793 | 387 | 197 | 8 | 96 | 447 | 8 | 393 | 2.38e-82 | 263 |
Msa0186410 | AT1G14970.1 | 40.678 | 354 | 178 | 7 | 112 | 433 | 156 | 509 | 3.33e-81 | 263 |
Msa0186410 | AT1G38131.1 | 39.303 | 402 | 204 | 9 | 78 | 447 | 129 | 522 | 6.79e-81 | 263 |
Msa0186410 | AT2G03280.2 | 38.717 | 421 | 199 | 11 | 112 | 475 | 89 | 507 | 2.59e-80 | 259 |
Msa0186410 | AT1G04910.1 | 36.916 | 428 | 239 | 11 | 82 | 484 | 61 | 482 | 1.72e-78 | 254 |
Msa0186410 | AT1G62330.1 | 37.343 | 399 | 187 | 7 | 112 | 447 | 222 | 620 | 1.09e-77 | 256 |
Msa0186410 | AT5G01100.1 | 32.427 | 515 | 285 | 14 | 15 | 484 | 120 | 616 | 4.53e-77 | 254 |
Msa0186410 | AT2G44500.1 | 37.352 | 423 | 234 | 10 | 82 | 478 | 146 | 563 | 5.61e-76 | 249 |
Msa0186410 | AT1G11990.1 | 36.725 | 403 | 216 | 9 | 80 | 447 | 161 | 559 | 2.27e-75 | 248 |
Msa0186410 | AT1G29200.4 | 36.854 | 426 | 207 | 10 | 112 | 477 | 71 | 494 | 3.27e-73 | 240 |
Msa0186410 | AT1G29200.1 | 36.854 | 426 | 207 | 10 | 112 | 477 | 71 | 494 | 3.27e-73 | 240 |
Msa0186410 | AT4G24530.1 | 33.408 | 449 | 240 | 12 | 82 | 477 | 75 | 517 | 1.19e-72 | 239 |
Msa0186410 | AT1G29200.3 | 36.730 | 422 | 205 | 10 | 116 | 477 | 1 | 420 | 4.61e-72 | 235 |
Msa0186410 | AT1G29200.2 | 36.854 | 426 | 207 | 10 | 112 | 477 | 187 | 610 | 5.25e-72 | 240 |
Msa0186410 | AT5G65470.1 | 34.146 | 451 | 234 | 12 | 82 | 476 | 59 | 502 | 1.07e-71 | 236 |
Msa0186410 | AT1G11990.2 | 30.799 | 513 | 259 | 12 | 27 | 447 | 73 | 581 | 8.19e-69 | 231 |
Msa0186410 | AT3G07900.1 | 36.620 | 426 | 239 | 12 | 82 | 481 | 157 | 577 | 1.05e-68 | 230 |
Msa0186410 | AT5G63390.1 | 36.150 | 426 | 234 | 11 | 70 | 464 | 115 | 533 | 5.65e-68 | 228 |
Msa0186410 | AT3G26370.2 | 42.584 | 209 | 111 | 3 | 112 | 311 | 159 | 367 | 4.81e-47 | 168 |
Msa0186410 | AT1G52630.1 | 29.296 | 355 | 229 | 6 | 73 | 413 | 37 | 383 | 6.22e-43 | 158 |
Msa0186410 | AT2G44500.2 | 37.548 | 261 | 155 | 5 | 82 | 336 | 146 | 404 | 8.65e-42 | 154 |
Msa0186410 | AT1G52630.2 | 29.568 | 301 | 191 | 5 | 127 | 413 | 2 | 295 | 1.71e-37 | 141 |
Msa0186410 | AT3G30300.2 | 29.573 | 328 | 192 | 9 | 79 | 371 | 69 | 392 | 1.11e-33 | 135 |
Msa0186410 | AT3G30300.1 | 29.573 | 328 | 192 | 9 | 79 | 371 | 69 | 392 | 1.11e-33 | 135 |
Msa0186410 | AT3G03810.2 | 32.095 | 296 | 169 | 8 | 108 | 371 | 86 | 381 | 1.69e-33 | 134 |
Msa0186410 | AT3G03810.1 | 32.095 | 296 | 169 | 8 | 108 | 371 | 86 | 381 | 1.69e-33 | 134 |
Find 132 sgRNAs with CRISPR-Local
Find 542 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGCTTTCGGTTCATCGAAAT+TGG | 0.159092 | 2_1:-1107227 | None:intergenic |
AGCATTAGACCGACTTCTTC+TGG | 0.168955 | 2_1:-1113809 | None:intergenic |
TACTTTGGTTGTTCCAAAAT+TGG | 0.175411 | 2_1:+1109079 | Msa0186410:CDS |
AGCCATGTTACCATTGTTAT+TGG | 0.202946 | 2_1:-1114050 | None:intergenic |
TAAGACCGCTGATCCAATTT+TGG | 0.252503 | 2_1:-1109092 | None:intergenic |
CCCTGCCTCCTGGCCCTATC+AGG | 0.263185 | 2_1:-1113770 | None:intergenic |
AATTGGATCAGCGGTCTTAC+TGG | 0.268822 | 2_1:+1109096 | Msa0186410:CDS |
CCAGAAAATGCAAGCATATC+AGG | 0.295328 | 2_1:-1113315 | None:intergenic |
CAGAGATCTTTGATGTTGAT+TGG | 0.310241 | 2_1:+1109253 | Msa0186410:CDS |
TGATGAACGTTGCTGGGTTC+TGG | 0.337065 | 2_1:-1107397 | None:intergenic |
CGAGAAGAAAATGAAGAAAA+TGG | 0.344650 | 2_1:-1113977 | None:intergenic |
AACAAACGGGAGTACGCTTT+CGG | 0.354919 | 2_1:-1107241 | None:intergenic |
GGTCTTACTGGAAAGATTCT+AGG | 0.369144 | 2_1:+1109108 | Msa0186410:CDS |
TTGAAATCTGTAATCTCCTT+CGG | 0.379385 | 2_1:-1107503 | None:intergenic |
TCCTGATAGGGCCAGGAGGC+AGG | 0.383084 | 2_1:+1113769 | Msa0186410:CDS |
GCATTAGACCGACTTCTTCT+GGG | 0.384373 | 2_1:-1113808 | None:intergenic |
GGCTTGAATCAACAAAGAAC+TGG | 0.385240 | 2_1:+1108362 | Msa0186410:CDS |
TACTTTCCAGAAAGGCTTCA+TGG | 0.385961 | 2_1:+1114301 | Msa0186410:CDS |
CATCTTTCACTGCATTTCCT+TGG | 0.387886 | 2_1:-1109369 | None:intergenic |
CCGACTTCTTCTGGGGTTAA+CGG | 0.388428 | 2_1:-1113800 | None:intergenic |
AAAACCTGAGTTCCGTGTTC+CGG | 0.389149 | 2_1:+1108008 | Msa0186410:CDS |
CTACCAGGTCTAACCTCCTT+TGG | 0.391129 | 2_1:-1114329 | None:intergenic |
CTTTCCGACCCTTACTGCTT+GGG | 0.395995 | 2_1:-1109320 | None:intergenic |
TCTTCACATATGCAGGTAGA+TGG | 0.402793 | 2_1:-1114371 | None:intergenic |
GACATCATTTGACAAATATG+AGG | 0.410175 | 2_1:-1109280 | None:intergenic |
AGAGAAGGAACATAAGGAAC+TGG | 0.410517 | 2_1:+1113356 | Msa0186410:CDS |
TGAAATCTGTAATCTCCTTC+GGG | 0.412473 | 2_1:-1107502 | None:intergenic |
TGAGAATGGGAGAGAGGTGG+AGG | 0.414329 | 2_1:-1107657 | None:intergenic |
TTTCTCTCCCTTGTGAGAAT+GGG | 0.417335 | 2_1:-1107670 | None:intergenic |
TGGAGGAGGAGACACCAATT+TGG | 0.420371 | 2_1:-1107640 | None:intergenic |
CTTTCTTATAGGAGATACTT+TGG | 0.423658 | 2_1:+1114182 | Msa0186410:intron |
ATTACATTGCACTGCATTTG+AGG | 0.426954 | 2_1:+1110456 | Msa0186410:CDS |
TTGACTACAGGCTTGCAAAC+AGG | 0.433422 | 2_1:+1110315 | Msa0186410:CDS |
GAATGGGAGAGAGGTGGAGG+AGG | 0.433593 | 2_1:-1107654 | None:intergenic |
ATAAGGAACTGGGCGCAATA+AGG | 0.438812 | 2_1:+1113367 | Msa0186410:CDS |
GGTCTAATGCTAAGAGCGTT+GGG | 0.438817 | 2_1:+1113821 | Msa0186410:CDS |
CGGTCTAATGCTAAGAGCGT+TGG | 0.446845 | 2_1:+1113820 | Msa0186410:CDS |
GCTTTCCGACCCTTACTGCT+TGG | 0.447208 | 2_1:-1109321 | None:intergenic |
TTAGCATTTGGACGAATAGT+TGG | 0.451966 | 2_1:-1114212 | None:intergenic |
CCGTGATGTGTTGGCGTCTC+CGG | 0.452493 | 2_1:-1107850 | None:intergenic |
TAGTTCCTCCTTGGTAGCAA+TGG | 0.453907 | 2_1:-1113951 | None:intergenic |
TGCAGAAAAGCAATCCTGAT+AGG | 0.456425 | 2_1:+1113756 | Msa0186410:intron |
TCTTTCTCATCCTCATCCGT+TGG | 0.459648 | 2_1:-1110430 | None:intergenic |
CATCACAAACAATAAAATCA+AGG | 0.465180 | 2_1:-1114009 | None:intergenic |
GCAATCAACAAATACCGATT+CGG | 0.465428 | 2_1:-1108329 | None:intergenic |
GTGTGAATGATGAACGTTGC+TGG | 0.469018 | 2_1:-1107404 | None:intergenic |
CAAGCAACTCCCAAGCAGTA+AGG | 0.472904 | 2_1:+1109311 | Msa0186410:CDS |
TTCCAAACAACAAAACTGTA+TGG | 0.478601 | 2_1:+1107341 | Msa0186410:five_prime_UTR |
CACAGAATCTTCACATATGC+AGG | 0.485794 | 2_1:-1114378 | None:intergenic |
TGTGTGGAGTTCGAGAAATT+CGG | 0.487684 | 2_1:+1108154 | Msa0186410:CDS |
CGGACATCTTCCCTGCCTCC+TGG | 0.490472 | 2_1:-1113780 | None:intergenic |
AACTCAACAAGTTTGACTAC+AGG | 0.491216 | 2_1:+1110303 | Msa0186410:CDS |
AGTGTTCGTACTTTCCAGAA+AGG | 0.497793 | 2_1:+1114293 | Msa0186410:CDS |
AAATGGTTCTAGTTCCTCCT+TGG | 0.505721 | 2_1:-1113960 | None:intergenic |
ACTTTCCAGAAAGGCTTCAT+GGG | 0.506686 | 2_1:+1114302 | Msa0186410:CDS |
TGAACAGAAGTAACTCGACT+TGG | 0.511215 | 2_1:+1114255 | Msa0186410:CDS |
AGTTCACGTGGGCACGTGCA+AGG | 0.516189 | 2_1:+1107295 | Msa0186410:five_prime_UTR |
GCGGCGACGGCGGAAATCAT+CGG | 0.525722 | 2_1:-1107758 | None:intergenic |
TGGAGGAGAGAAGGAACATA+AGG | 0.528093 | 2_1:+1113350 | Msa0186410:CDS |
AAAGCAATCCTGATAGGGCC+AGG | 0.532881 | 2_1:+1113762 | Msa0186410:CDS |
AGAAATTCGGAACACTTCTA+CGG | 0.534845 | 2_1:+1108167 | Msa0186410:CDS |
TTTCGGTTCATCGAAATTGG+AGG | 0.536443 | 2_1:-1107224 | None:intergenic |
TCATGAAACCCTCCTCTACC+AGG | 0.538317 | 2_1:-1114344 | None:intergenic |
TGGGCGCAATAAGGAGGAGA+TGG | 0.539483 | 2_1:+1113376 | Msa0186410:CDS |
ACCTCTCTCCCATTCTCACA+AGG | 0.540082 | 2_1:+1107662 | Msa0186410:five_prime_UTR |
CCTGATAGGGCCAGGAGGCA+GGG | 0.542578 | 2_1:+1113770 | Msa0186410:CDS |
CATACAGCCTGCGTGTTCCA+AGG | 0.544507 | 2_1:+1109352 | Msa0186410:CDS |
GAGGTTAGACCTGGTAGAGG+AGG | 0.544967 | 2_1:+1114335 | Msa0186410:CDS |
GCAGAAAAGCAATCCTGATA+GGG | 0.548539 | 2_1:+1113757 | Msa0186410:intron |
AAAAGAAACCATTGCTACCA+AGG | 0.549342 | 2_1:+1113943 | Msa0186410:CDS |
AAGTAGAGCGGCGGCGACGG+CGG | 0.550184 | 2_1:-1107768 | None:intergenic |
AAGTTGAGCATACCTTCGTC+CGG | 0.553115 | 2_1:-1114083 | None:intergenic |
CACCAATAACAATGGTAACA+TGG | 0.554000 | 2_1:+1114048 | Msa0186410:CDS |
TGACTATGGTGGAGGAGAGA+AGG | 0.557134 | 2_1:+1113341 | Msa0186410:CDS |
AAGCAACTCCCAAGCAGTAA+GGG | 0.557785 | 2_1:+1109312 | Msa0186410:CDS |
GAAAGCTGAGCCGCGATGTG+TGG | 0.564328 | 2_1:+1108138 | Msa0186410:CDS |
AACATGGCTAAAATATTAGC+CGG | 0.565993 | 2_1:+1114064 | Msa0186410:CDS |
CTACAGGCTTGCAAACAGGT+TGG | 0.566092 | 2_1:+1110319 | Msa0186410:CDS |
AGAGATTTACCGTGATGTGT+TGG | 0.566372 | 2_1:-1107859 | None:intergenic |
CGTACTTGGAAACTTGCTGC+TGG | 0.566592 | 2_1:-1108201 | None:intergenic |
GACGGAAGCGTTGATAAAAG+TGG | 0.567941 | 2_1:-1107727 | None:intergenic |
TTGTTGATTGCAACTAGTGG+AGG | 0.569731 | 2_1:+1108341 | Msa0186410:CDS |
GCGTCTCCGGTGTATATGAT+CGG | 0.570166 | 2_1:-1107837 | None:intergenic |
AAGCAGCTACAAAACCGAAT+CGG | 0.572163 | 2_1:+1108315 | Msa0186410:CDS |
TTATTGATGTGATGTGTGAG+TGG | 0.574377 | 2_1:-1107473 | None:intergenic |
TATTTGTTGATTGCAACTAG+TGG | 0.574632 | 2_1:+1108338 | Msa0186410:CDS |
AGGTTAGACCTGGTAGAGGA+GGG | 0.579430 | 2_1:+1114336 | Msa0186410:CDS |
GCTTGAATCAACAAAGAACT+GGG | 0.581267 | 2_1:+1108363 | Msa0186410:CDS |
ATCACAAACAATAAAATCAA+GGG | 0.582973 | 2_1:-1114008 | None:intergenic |
AAGGAGGTTAGACCTGGTAG+AGG | 0.583281 | 2_1:+1114332 | Msa0186410:CDS |
TGATCGGAATCGATAGGAGA+AGG | 0.584171 | 2_1:-1107821 | None:intergenic |
CCCTTGTGAGAATGGGAGAG+AGG | 0.584821 | 2_1:-1107663 | None:intergenic |
GTTCACGTGGGCACGTGCAA+GGG | 0.595002 | 2_1:+1107296 | Msa0186410:five_prime_UTR |
CTAACCGGAACACGGAACTC+AGG | 0.596840 | 2_1:-1108012 | None:intergenic |
GAGCCAAAGGAGGTTAGACC+TGG | 0.602043 | 2_1:+1114326 | Msa0186410:CDS |
CATTAGACCGACTTCTTCTG+GGG | 0.602188 | 2_1:-1113807 | None:intergenic |
AACTCCCAAGCAGTAAGGGT+CGG | 0.602499 | 2_1:+1109316 | Msa0186410:CDS |
AGGAACTGGGCGCAATAAGG+AGG | 0.607123 | 2_1:+1113370 | Msa0186410:CDS |
TTGTTCCAAAATTGGATCAG+CGG | 0.607564 | 2_1:+1109087 | Msa0186410:CDS |
TTAGGGAATAATGCTTTGAG+AGG | 0.608619 | 2_1:-1113911 | None:intergenic |
TATTGATGTGATGTGTGAGT+GGG | 0.608819 | 2_1:-1107472 | None:intergenic |
GAACAGAAGTAACTCGACTT+GGG | 0.609695 | 2_1:+1114256 | Msa0186410:CDS |
TGCATTTCCTTGGAACACGC+AGG | 0.613917 | 2_1:-1109359 | None:intergenic |
CTTTCCAGAAAGGCTTCATG+GGG | 0.618495 | 2_1:+1114303 | Msa0186410:CDS |
TTTCTGGAAAGTACGAACAC+TGG | 0.620341 | 2_1:-1114291 | None:intergenic |
TTCTCGAACTCCACACATCG+CGG | 0.620615 | 2_1:-1108148 | None:intergenic |
CCGTTAACCCCAGAAGAAGT+CGG | 0.623838 | 2_1:+1113800 | Msa0186410:CDS |
TCTGGATGTGACTATGGTGG+AGG | 0.624683 | 2_1:+1113333 | Msa0186410:CDS |
TGTATATGATCGGAATCGAT+AGG | 0.624984 | 2_1:-1107827 | None:intergenic |
TGTGAATGATGAACGTTGCT+GGG | 0.625104 | 2_1:-1107403 | None:intergenic |
GAGAAGGAACATAAGGAACT+GGG | 0.625349 | 2_1:+1113357 | Msa0186410:CDS |
TTGTGAGAATGGGAGAGAGG+TGG | 0.625529 | 2_1:-1107660 | None:intergenic |
GATCGGTAAATCTTAGAGCA+TGG | 0.625626 | 2_1:-1110379 | None:intergenic |
CCGGAGACGCCAACACATCA+CGG | 0.626575 | 2_1:+1107850 | Msa0186410:CDS |
CTAAAATATTAGCCGGACGA+AGG | 0.633857 | 2_1:+1114071 | Msa0186410:CDS |
ACAAAACTGTATGGCAACGA+AGG | 0.638593 | 2_1:+1107350 | Msa0186410:five_prime_UTR |
AAACTGTATGGCAACGAAGG+CGG | 0.648166 | 2_1:+1107353 | Msa0186410:five_prime_UTR |
AGATATCACGATAGTTCACG+TGG | 0.648879 | 2_1:+1107283 | Msa0186410:five_prime_UTR |
ATATAGAGGAGATGAAACAT+TGG | 0.650301 | 2_1:+1113886 | Msa0186410:intron |
GTGTTTGTCACCAATAACAA+TGG | 0.650929 | 2_1:+1114040 | Msa0186410:CDS |
GGAAGCGTTGATAAAAGTGG+TGG | 0.655269 | 2_1:-1107724 | None:intergenic |
AAATCATCGGAATCATAAGA+CGG | 0.658940 | 2_1:-1107745 | None:intergenic |
CCTCTCTCCCATTCTCACAA+GGG | 0.668006 | 2_1:+1107663 | Msa0186410:five_prime_UTR |
AACAGCTACAACTGAAGACG+AGG | 0.674966 | 2_1:+1115318 | Msa0186410:CDS |
CATCAATAATCACTTCCCGA+AGG | 0.675416 | 2_1:+1107487 | Msa0186410:five_prime_UTR |
GTCTAATGCTAAGAGCGTTG+GGG | 0.684569 | 2_1:+1113822 | Msa0186410:CDS |
GCAATCCTGATAGGGCCAGG+AGG | 0.699932 | 2_1:+1113765 | Msa0186410:CDS |
TCGATTCCGATCATATACAC+CGG | 0.716936 | 2_1:+1107831 | Msa0186410:CDS |
AGAAACCATTGCTACCAAGG+AGG | 0.733733 | 2_1:+1113946 | Msa0186410:CDS |
CTTGAATCAACAAAGAACTG+GGG | 0.754417 | 2_1:+1108364 | Msa0186410:CDS |
TTTCCAGAAAGGCTTCATGG+GGG | 0.754484 | 2_1:+1114304 | Msa0186410:CDS |
GATATCACGATAGTTCACGT+GGG | 0.767951 | 2_1:+1107284 | Msa0186410:five_prime_UTR |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATGATTATTTAATTACTATA+CGG | - | chr2_1:1108619-1108638 | None:intergenic | 10.0% |
!! | AAGATATATATAATACTATT+AGG | + | chr2_1:1109553-1109572 | Msa0186410:intron | 10.0% |
!! | AAACAATTTAAAAACATAAA+AGG | - | chr2_1:1112676-1112695 | None:intergenic | 10.0% |
!!! | TATTGTTTTTCTTTAACAAA+CGG | - | chr2_1:1107258-1107277 | None:intergenic | 15.0% |
!! | GTATAGTAATTAAATAATCA+TGG | + | chr2_1:1108618-1108637 | Msa0186410:intron | 15.0% |
!! | ATTAAACATAAAAGATTTAC+TGG | - | chr2_1:1108894-1108913 | None:intergenic | 15.0% |
!!! | TATAGTAAATGTATTTTAGA+TGG | + | chr2_1:1109633-1109652 | Msa0186410:intron | 15.0% |
!!! | ATTTTTATTATGCAAATCAT+GGG | - | chr2_1:1109928-1109947 | None:intergenic | 15.0% |
!!! | AATTTTTATTATGCAAATCA+TGG | - | chr2_1:1109929-1109948 | None:intergenic | 15.0% |
!! | TTGAAAATTTAATGATCATA+GGG | - | chr2_1:1109993-1110012 | None:intergenic | 15.0% |
!! | TTTGAAAATTTAATGATCAT+AGG | - | chr2_1:1109994-1110013 | None:intergenic | 15.0% |
!! | TGTTTATTAAAAGCAAAAAA+AGG | - | chr2_1:1110167-1110186 | None:intergenic | 15.0% |
!! | AAATAAAATGAATATCTTAG+TGG | - | chr2_1:1110726-1110745 | None:intergenic | 15.0% |
!! | AAAAATAAAAATCAGCATAA+TGG | - | chr2_1:1110866-1110885 | None:intergenic | 15.0% |
!!! | TATGCTGATTTTTATTTTTT+TGG | + | chr2_1:1110867-1110886 | Msa0186410:intron | 15.0% |
!!! | TTTATTTTTTTGGTTTAGAT+AGG | + | chr2_1:1110877-1110896 | Msa0186410:intron | 15.0% |
!!! | TTATTTTTTTGGTTTAGATA+GGG | + | chr2_1:1110878-1110897 | Msa0186410:intron | 15.0% |
!! | AAGAACAAATTTATAGTATT+TGG | - | chr2_1:1111056-1111075 | None:intergenic | 15.0% |
!! | TTATAAATATAGCATACATT+TGG | - | chr2_1:1111548-1111567 | None:intergenic | 15.0% |
!!! | AGATTTTTTAGAAATTTACA+AGG | - | chr2_1:1112184-1112203 | None:intergenic | 15.0% |
!!! | TGTAAATTTCTAAAAAATCT+CGG | + | chr2_1:1112184-1112203 | Msa0186410:intron | 15.0% |
!!! | TAATTTGAAACAAAGAAAAA+TGG | + | chr2_1:1113058-1113077 | Msa0186410:intron | 15.0% |
!! | ATCTCTTAATAAATTATTGT+TGG | - | chr2_1:1113441-1113460 | None:intergenic | 15.0% |
!! | ATTTAATGAAAAATGTAGTT+AGG | - | chr2_1:1113572-1113591 | None:intergenic | 15.0% |
!!! | ATTGTTTTTCTTTAACAAAC+GGG | - | chr2_1:1107257-1107276 | None:intergenic | 20.0% |
!! | ATAGAACAGAAAAAGAAAAT+AGG | - | chr2_1:1107434-1107453 | None:intergenic | 20.0% |
!!! | AACATACATTTTTACCAAAT+TGG | + | chr2_1:1107626-1107645 | Msa0186410:five_prime_UTR | 20.0% |
!!! | AGATTTCATGATTTTGTTAT+TGG | + | chr2_1:1108067-1108086 | Msa0186410:intron | 20.0% |
!! | AATTTGACAACCTTAATATA+AGG | - | chr2_1:1108504-1108523 | None:intergenic | 20.0% |
!! | TTATTGTTTCCAAACTATAT+GGG | + | chr2_1:1108967-1108986 | Msa0186410:intron | 20.0% |
!!! | GATCATTTTGTTTTTACAAA+TGG | + | chr2_1:1109015-1109034 | Msa0186410:intron | 20.0% |
!!! | TTATGTTTTCCTTTTTAAGT+AGG | + | chr2_1:1109489-1109508 | Msa0186410:intron | 20.0% |
!!! | TTTTAACTGCTTTTCATTTA+AGG | + | chr2_1:1109579-1109598 | Msa0186410:intron | 20.0% |
!!! | ATCCTATGGTTTTAAATTTT+TGG | - | chr2_1:1109800-1109819 | None:intergenic | 20.0% |
!!! | CAGAAATGGTTTTAAATTTT+TGG | - | chr2_1:1109838-1109857 | None:intergenic | 20.0% |
!!! | TTTTTATTATGCAAATCATG+GGG | - | chr2_1:1109927-1109946 | None:intergenic | 20.0% |
!! | GTCATATTTAATGATCAAAA+CGG | - | chr2_1:1109956-1109975 | None:intergenic | 20.0% |
!!! | ACAGTTTTTTAGGAAATTTT+TGG | + | chr2_1:1110110-1110129 | Msa0186410:intron | 20.0% |
!!! | ATATTGTTGCTTCATTTATA+TGG | + | chr2_1:1110270-1110289 | Msa0186410:intron | 20.0% |
!!! | ATACTACATTATAGTTTTAG+TGG | - | chr2_1:1110579-1110598 | None:intergenic | 20.0% |
!!! | TCATTTTATTTGCACAAATA+TGG | + | chr2_1:1110735-1110754 | Msa0186410:intron | 20.0% |
!! | ACAAGTAATATAACTCAAAT+TGG | + | chr2_1:1110811-1110830 | Msa0186410:intron | 20.0% |
!! | AAGAACAAGTTTACAATATA+TGG | + | chr2_1:1111164-1111183 | Msa0186410:intron | 20.0% |
!! | ATGTATGCTATATTTATAAC+TGG | + | chr2_1:1111549-1111568 | Msa0186410:intron | 20.0% |
!! | TTTGTTCTAGCATATAAAAT+AGG | + | chr2_1:1111834-1111853 | Msa0186410:intron | 20.0% |
!! | CACTTTCAATTCATTTAATA+GGG | + | chr2_1:1111915-1111934 | Msa0186410:intron | 20.0% |
!! | CAAAAGTTGTATAATTGAAA+AGG | - | chr2_1:1112369-1112388 | None:intergenic | 20.0% |
!! | TTAAAAACATAAAAGGTGAT+GGG | - | chr2_1:1112669-1112688 | None:intergenic | 20.0% |
!! | TTTAAAAACATAAAAGGTGA+TGG | - | chr2_1:1112670-1112689 | None:intergenic | 20.0% |
!! | TAAAACACCCTTATTAATTA+TGG | + | chr2_1:1112808-1112827 | Msa0186410:intron | 20.0% |
!! | CTACTAACCATAATTAATAA+GGG | - | chr2_1:1112818-1112837 | None:intergenic | 20.0% |
!! | TCTACTAACCATAATTAATA+AGG | - | chr2_1:1112819-1112838 | None:intergenic | 20.0% |
!! | AAGACTAAAACCTTAAAATT+AGG | - | chr2_1:1113095-1113114 | None:intergenic | 20.0% |
!!! | TAATTTTAAGGTTTTAGTCT+TGG | + | chr2_1:1113094-1113113 | Msa0186410:intron | 20.0% |
!!! | AATGGCTTTTAACATTTTAA+TGG | + | chr2_1:1113602-1113621 | Msa0186410:intron | 20.0% |
!!! | TTTCTTTTGAATGGAAATTA+GGG | - | chr2_1:1113931-1113950 | None:intergenic | 20.0% |
!! | ATCACAAACAATAAAATCAA+GGG | - | chr2_1:1114011-1114030 | None:intergenic | 20.0% |
!! | TTGTAATTAAATCTGGAAAA+AGG | + | chr2_1:1114893-1114912 | Msa0186410:intron | 20.0% |
! | GAGAGAAAACAAAACAAAAA+TGG | + | chr2_1:1107685-1107704 | Msa0186410:exon | 25.0% |
! | AGAAAACAAAACAAAAATGG+CGG | + | chr2_1:1107688-1107707 | Msa0186410:exon | 25.0% |
!!! | TTTTGTTTTGATCAGAAAGA+TGG | + | chr2_1:1108113-1108132 | Msa0186410:intron | 25.0% |
! | CTATTTCATTAATCAAAGCA+TGG | + | chr2_1:1108400-1108419 | Msa0186410:intron | 25.0% |
! | ATCAGATTTGCCTTATATTA+AGG | + | chr2_1:1108491-1108510 | Msa0186410:intron | 25.0% |
!!! | AATAGTTTTGCATCAAAATC+TGG | + | chr2_1:1108858-1108877 | Msa0186410:intron | 25.0% |
! | CTTATTGTTTCCAAACTATA+TGG | + | chr2_1:1108966-1108985 | Msa0186410:intron | 25.0% |
!! | ATTTGCATAATGAGTTTTTC+AGG | + | chr2_1:1109668-1109687 | Msa0186410:intron | 25.0% |
!! | TGCCAAAAATTTAAAACCAT+AGG | + | chr2_1:1109795-1109814 | Msa0186410:intron | 25.0% |
! | AAATAGAAAAGGTTCAGAAA+TGG | - | chr2_1:1109852-1109871 | None:intergenic | 25.0% |
!! | TTTTATTATGCAAATCATGG+GGG | - | chr2_1:1109926-1109945 | None:intergenic | 25.0% |
!!! | ACTTAAAGTGGGTTAAATTT+CGG | - | chr2_1:1110024-1110043 | None:intergenic | 25.0% |
! | AAGTCCTAGTTTCTATAAAA+TGG | + | chr2_1:1110040-1110059 | Msa0186410:intron | 25.0% |
! | CTGATTTCAGTTATCAAAAT+AGG | + | chr2_1:1110063-1110082 | Msa0186410:intron | 25.0% |
!!! | TTTTGACCCATTTTTAGTAT+TGG | - | chr2_1:1110404-1110423 | None:intergenic | 25.0% |
! | ACTAAAAATGGGTCAAAAAT+TGG | + | chr2_1:1110406-1110425 | Msa0186410:CDS | 25.0% |
! | ATCAATCAGATTCATCAATT+TGG | + | chr2_1:1110550-1110569 | Msa0186410:intron | 25.0% |
!! | ACATGAGCAAATTTTTAACA+AGG | - | chr2_1:1110628-1110647 | None:intergenic | 25.0% |
! | TACAAATACTTGTCAAAACT+GGG | + | chr2_1:1110647-1110666 | Msa0186410:intron | 25.0% |
! | TATAACTCAAATTGGATAAG+TGG | + | chr2_1:1110819-1110838 | Msa0186410:intron | 25.0% |
! | TTCACTTAATATGATCATTC+TGG | - | chr2_1:1111114-1111133 | None:intergenic | 25.0% |
! | GTGAAACAGAATTGTAATAA+AGG | + | chr2_1:1111129-1111148 | Msa0186410:intron | 25.0% |
! | AACAGAATTGTAATAAAGGT+TGG | + | chr2_1:1111133-1111152 | Msa0186410:intron | 25.0% |
! | TGAAGTTTCAATAACTCAAT+TGG | + | chr2_1:1111202-1111221 | Msa0186410:intron | 25.0% |
! | TCTCTAACATAGATCTTATA+CGG | + | chr2_1:1111388-1111407 | Msa0186410:intron | 25.0% |
! | TAAATATAGCATACATTTGG+AGG | - | chr2_1:1111545-1111564 | None:intergenic | 25.0% |
! | GCACTTTCAATTCATTTAAT+AGG | + | chr2_1:1111914-1111933 | Msa0186410:intron | 25.0% |
!!! | TAATTTTTGCTTTGAACAGA+AGG | + | chr2_1:1112130-1112149 | Msa0186410:intron | 25.0% |
!!! | AATGTAAATTGGGTTTTAGA+TGG | + | chr2_1:1112409-1112428 | Msa0186410:intron | 25.0% |
! | TATCAATGGAAATTTGATCA+AGG | + | chr2_1:1112476-1112495 | Msa0186410:intron | 25.0% |
! | TCCTTTAGATATATCTTGAT+TGG | + | chr2_1:1112630-1112649 | Msa0186410:intron | 25.0% |
! | TCCAATCAAGATATATCTAA+AGG | - | chr2_1:1112634-1112653 | None:intergenic | 25.0% |
!!! | TTAGTTTTACACGAGAATTA+AGG | + | chr2_1:1112740-1112759 | Msa0186410:intron | 25.0% |
!!! | ATTAGTAGTGTTGATTTTCA+TGG | + | chr2_1:1112768-1112787 | Msa0186410:intron | 25.0% |
! | TGATTGAAATGCATGAAATA+AGG | + | chr2_1:1112847-1112866 | Msa0186410:intron | 25.0% |
! | GATTGAAATGCATGAAATAA+GGG | + | chr2_1:1112848-1112867 | Msa0186410:intron | 25.0% |
!! | AATAAATAAGGGTATGATAG+TGG | + | chr2_1:1112994-1113013 | Msa0186410:intron | 25.0% |
! | AACAAAGAAAAATGGTAAAG+AGG | + | chr2_1:1113066-1113085 | Msa0186410:intron | 25.0% |
!!! | TTGGTACTGTTGATTTTTTT+CGG | + | chr2_1:1113184-1113203 | Msa0186410:intron | 25.0% |
! | ATTACTTATGCAAAACCATA+TGG | + | chr2_1:1113513-1113532 | Msa0186410:intron | 25.0% |
! | TAACATAAATTGATGCCATA+TGG | - | chr2_1:1113531-1113550 | None:intergenic | 25.0% |
! | CATTAAATGAATATCAGCAA+TGG | + | chr2_1:1113584-1113603 | Msa0186410:intron | 25.0% |
! | TCAAATAATGCCTATTTACT+TGG | - | chr2_1:1113654-1113673 | None:intergenic | 25.0% |
! | TTCATATTTATGTTGCATCT+GGG | + | chr2_1:1113858-1113877 | Msa0186410:intron | 25.0% |
!! | GTTTCTTTTGAATGGAAATT+AGG | - | chr2_1:1113932-1113951 | None:intergenic | 25.0% |
! | CATCACAAACAATAAAATCA+AGG | - | chr2_1:1114012-1114031 | None:intergenic | 25.0% |
!!! | TGTTTATTTTCACTTTCTGT+TGG | + | chr2_1:1114114-1114133 | Msa0186410:intron | 25.0% |
!! | TGGATCTAGAAAATTTTCAA+GGG | + | chr2_1:1114421-1114440 | Msa0186410:intron | 25.0% |
!!! | ATCATTTGCTACAACTTTTT+TGG | - | chr2_1:1114456-1114475 | None:intergenic | 25.0% |
!!! | ATATATGTGCTTTTTCTGTT+CGG | - | chr2_1:1114735-1114754 | None:intergenic | 25.0% |
! | TTTGGACTTGTAATTAAATC+TGG | + | chr2_1:1114886-1114905 | Msa0186410:intron | 25.0% |
!! | AAATCTGTATATTTTCGTTG+AGG | + | chr2_1:1115002-1115021 | Msa0186410:intron | 25.0% |
! | TTCTATAAAGCTGATCAAAA+TGG | + | chr2_1:1115198-1115217 | Msa0186410:intron | 25.0% |
!!! | ACAGTTTTGTTGTTTGGAAA+TGG | - | chr2_1:1107340-1107359 | None:intergenic | 30.0% |
TTCCAAACAACAAAACTGTA+TGG | + | chr2_1:1107341-1107360 | Msa0186410:five_prime_UTR | 30.0% | |
TTGAAATCTGTAATCTCCTT+CGG | - | chr2_1:1107506-1107525 | None:intergenic | 30.0% | |
AAATCATCGGAATCATAAGA+CGG | - | chr2_1:1107748-1107767 | None:intergenic | 30.0% | |
!! | AGGTTTTTCAATCACTTCAT+TGG | - | chr2_1:1107995-1108014 | None:intergenic | 30.0% |
CTATTTGTGGATTCTGTTAT+TGG | + | chr2_1:1108228-1108247 | Msa0186410:intron | 30.0% | |
! | TATTTGTTGATTGCAACTAG+TGG | + | chr2_1:1108338-1108357 | Msa0186410:CDS | 30.0% |
ATATAAGGCAAATCTGATTG+AGG | - | chr2_1:1108489-1108508 | None:intergenic | 30.0% | |
AGAAAAGGGACTAAATTTGT+TGG | + | chr2_1:1108573-1108592 | Msa0186410:intron | 30.0% | |
! | AATAATCATGGAGCATTAGT+TGG | + | chr2_1:1108630-1108649 | Msa0186410:intron | 30.0% |
TACTTTGGTTGTTCCAAAAT+TGG | + | chr2_1:1109079-1109098 | Msa0186410:CDS | 30.0% | |
! | ATTCTAGGTAATTTGCAGAA+AGG | + | chr2_1:1109123-1109142 | Msa0186410:intron | 30.0% |
TTACTGCAAAAGGTAAAGTA+TGG | - | chr2_1:1109228-1109247 | None:intergenic | 30.0% | |
GACATCATTTGACAAATATG+AGG | - | chr2_1:1109283-1109302 | None:intergenic | 30.0% | |
!!! | TGTTTTCCTTTTTAAGTAGG+AGG | + | chr2_1:1109492-1109511 | Msa0186410:intron | 30.0% |
!!! | GTTCGATTTTTTTTATCGCT+CGG | + | chr2_1:1109530-1109549 | Msa0186410:intron | 30.0% |
!!! | GTTTTTCAGGTTTCTTCATT+AGG | + | chr2_1:1109681-1109700 | Msa0186410:intron | 30.0% |
AAAAGATGAGAGATATCCTA+TGG | - | chr2_1:1109776-1109795 | None:intergenic | 30.0% | |
TTGCCAAGTGATCTTATAAT+TGG | + | chr2_1:1109870-1109889 | Msa0186410:intron | 30.0% | |
AGTCCAATTATAAGATCACT+TGG | - | chr2_1:1109876-1109895 | None:intergenic | 30.0% | |
!! | CTTAAAGTGGGTTAAATTTC+GGG | - | chr2_1:1110023-1110042 | None:intergenic | 30.0% |
TAGAAACTAGGACTTAAAGT+GGG | - | chr2_1:1110035-1110054 | None:intergenic | 30.0% | |
ATAGAAACTAGGACTTAAAG+TGG | - | chr2_1:1110036-1110055 | None:intergenic | 30.0% | |
!! | TCAGCCATTTTATAGAAACT+AGG | - | chr2_1:1110047-1110066 | None:intergenic | 30.0% |
!!! | TGATACTGCAACAGTTTTTT+AGG | + | chr2_1:1110100-1110119 | Msa0186410:intron | 30.0% |
TACCGATCCAATACTAAAAA+TGG | + | chr2_1:1110394-1110413 | Msa0186410:CDS | 30.0% | |
ACCGATCCAATACTAAAAAT+GGG | + | chr2_1:1110395-1110414 | Msa0186410:CDS | 30.0% | |
!!! | ACCCATTTTTAGTATTGGAT+CGG | - | chr2_1:1110399-1110418 | None:intergenic | 30.0% |
TCTGATTGATAAGATTACCT+GGG | - | chr2_1:1110540-1110559 | None:intergenic | 30.0% | |
ATCTGATTGATAAGATTACC+TGG | - | chr2_1:1110541-1110560 | None:intergenic | 30.0% | |
GTACAAATACTTGTCAAAAC+TGG | + | chr2_1:1110646-1110665 | Msa0186410:intron | 30.0% | |
CTTAACAAGCAAATGTAATG+AGG | - | chr2_1:1110699-1110718 | None:intergenic | 30.0% | |
! | ACATGGATGTTCATTTTCTT+GGG | + | chr2_1:1110761-1110780 | Msa0186410:intron | 30.0% |
AAAAATCAGCATAATGGCAT+TGG | - | chr2_1:1110860-1110879 | None:intergenic | 30.0% | |
! | TCTCCTCCTTTTATCTAAAT+GGG | - | chr2_1:1110947-1110966 | None:intergenic | 30.0% |
!! | TCAATAACTCAATTGGTTTG+AGG | + | chr2_1:1111209-1111228 | Msa0186410:intron | 30.0% |
AAAAGATAGAGAAAAACTGC+AGG | - | chr2_1:1111416-1111435 | None:intergenic | 30.0% | |
TTAGCGTGTTAAGATTAGAA+AGG | - | chr2_1:1111440-1111459 | None:intergenic | 30.0% | |
TTCTAATCTTAACACGCTAA+TGG | + | chr2_1:1111440-1111459 | Msa0186410:intron | 30.0% | |
AAACTAGTAATGCGCAATAA+AGG | + | chr2_1:1111599-1111618 | Msa0186410:intron | 30.0% | |
TTCTTAACAAGAATCTTGAG+GGG | - | chr2_1:1111777-1111796 | None:intergenic | 30.0% | |
GTTCTTAACAAGAATCTTGA+GGG | - | chr2_1:1111778-1111797 | None:intergenic | 30.0% | |
AGTTCTTAACAAGAATCTTG+AGG | - | chr2_1:1111779-1111798 | None:intergenic | 30.0% | |
ATATGCTAGAACAAAACATG+TGG | - | chr2_1:1111829-1111848 | None:intergenic | 30.0% | |
AAGCTAACCAAGATGATATA+AGG | - | chr2_1:1112079-1112098 | None:intergenic | 30.0% | |
CAGATATATTCAAGAGTTGT+TGG | - | chr2_1:1112317-1112336 | None:intergenic | 30.0% | |
CAACAACTCTTGAATATATC+TGG | + | chr2_1:1112315-1112334 | Msa0186410:intron | 30.0% | |
AATGGAAATTTGATCAAGGT+TGG | + | chr2_1:1112480-1112499 | Msa0186410:intron | 30.0% | |
AGTAACCGTTCAATTAAGAT+CGG | - | chr2_1:1112577-1112596 | None:intergenic | 30.0% | |
! | AAAGAGGACACCTAATTTTA+AGG | + | chr2_1:1113082-1113101 | Msa0186410:intron | 30.0% |
GTTCATATTTATGTTGCATC+TGG | + | chr2_1:1113857-1113876 | Msa0186410:intron | 30.0% | |
TCATATTTATGTTGCATCTG+GGG | + | chr2_1:1113859-1113878 | Msa0186410:intron | 30.0% | |
ATATAGAGGAGATGAAACAT+TGG | + | chr2_1:1113886-1113905 | Msa0186410:intron | 30.0% | |
! | TAGCAATGGTTTCTTTTGAA+TGG | - | chr2_1:1113940-1113959 | None:intergenic | 30.0% |
CGAGAAGAAAATGAAGAAAA+TGG | - | chr2_1:1113980-1113999 | None:intergenic | 30.0% | |
AACATGGCTAAAATATTAGC+CGG | + | chr2_1:1114064-1114083 | Msa0186410:CDS | 30.0% | |
CTTTCTGTACACTTTCTTAT+AGG | + | chr2_1:1114171-1114190 | Msa0186410:intron | 30.0% | |
CTTTCTTATAGGAGATACTT+TGG | + | chr2_1:1114182-1114201 | Msa0186410:intron | 30.0% | |
!!! | CTGTAGAGTTTTTTAGCATT+TGG | - | chr2_1:1114227-1114246 | None:intergenic | 30.0% |
! | TCCAGAATTTTTGTCCAATT+TGG | - | chr2_1:1114405-1114424 | None:intergenic | 30.0% |
! | CTGGATCTAGAAAATTTTCA+AGG | + | chr2_1:1114420-1114439 | Msa0186410:intron | 30.0% |
AAAAGTTGTAGCAAATGATG+AGG | + | chr2_1:1114457-1114476 | Msa0186410:intron | 30.0% | |
ATCAGAATGATCTTACAGAT+AGG | + | chr2_1:1114528-1114547 | Msa0186410:intron | 30.0% | |
TCAGAATGATCTTACAGATA+GGG | + | chr2_1:1114529-1114548 | Msa0186410:intron | 30.0% | |
!!! | TATATGTGCTTTTTCTGTTC+GGG | - | chr2_1:1114734-1114753 | None:intergenic | 30.0% |
!! | GTGCATTTTTAAGAGCATAA+TGG | + | chr2_1:1114834-1114853 | Msa0186410:intron | 30.0% |
CAAAATTTAGCAACAAACCA+AGG | - | chr2_1:1114860-1114879 | None:intergenic | 30.0% | |
!!! | TGGTTTGTTGCTAAATTTTG+TGG | + | chr2_1:1114860-1114879 | Msa0186410:intron | 30.0% |
!!! | GGTTTGTTGCTAAATTTTGT+GGG | + | chr2_1:1114861-1114880 | Msa0186410:intron | 30.0% |
!!! | TGCCATACAGTTTTGTTGTT+TGG | - | chr2_1:1107346-1107365 | None:intergenic | 35.0% |
TATTGATGTGATGTGTGAGT+GGG | - | chr2_1:1107475-1107494 | None:intergenic | 35.0% | |
TTATTGATGTGATGTGTGAG+TGG | - | chr2_1:1107476-1107495 | None:intergenic | 35.0% | |
TGAAATCTGTAATCTCCTTC+GGG | - | chr2_1:1107505-1107524 | None:intergenic | 35.0% | |
AACGAAGAGAAAAAGTAGAG+CGG | - | chr2_1:1107783-1107802 | None:intergenic | 35.0% | |
TGTATATGATCGGAATCGAT+AGG | - | chr2_1:1107830-1107849 | None:intergenic | 35.0% | |
!! | AATCCAGAAAAAGCACTAAC+CGG | - | chr2_1:1108030-1108049 | None:intergenic | 35.0% |
!!! | TGTTTTGATCAGAAAGATGG+AGG | + | chr2_1:1108116-1108135 | Msa0186410:intron | 35.0% |
AGAAATTCGGAACACTTCTA+CGG | + | chr2_1:1108167-1108186 | Msa0186410:CDS | 35.0% | |
CCACAAATAGATTACGTACT+TGG | - | chr2_1:1108218-1108237 | None:intergenic | 35.0% | |
CCAAGTACGTAATCTATTTG+TGG | + | chr2_1:1108215-1108234 | Msa0186410:intron | 35.0% | |
TGGATTCTGTTATTGGATCT+TGG | + | chr2_1:1108235-1108254 | Msa0186410:intron | 35.0% | |
! | GCAATCAACAAATACCGATT+CGG | - | chr2_1:1108332-1108351 | None:intergenic | 35.0% |
GCTTGAATCAACAAAGAACT+GGG | + | chr2_1:1108363-1108382 | Msa0186410:CDS | 35.0% | |
CTTGAATCAACAAAGAACTG+GGG | + | chr2_1:1108364-1108383 | Msa0186410:CDS | 35.0% | |
CAAAGCATGGATTTCATATC+TGG | + | chr2_1:1108413-1108432 | Msa0186410:intron | 35.0% | |
ATGTGACATTCGATGAGAAA+AGG | + | chr2_1:1108558-1108577 | Msa0186410:intron | 35.0% | |
TGTGACATTCGATGAGAAAA+GGG | + | chr2_1:1108559-1108578 | Msa0186410:intron | 35.0% | |
GGTAGGATCTGAAAACATAA+GGG | - | chr2_1:1108801-1108820 | None:intergenic | 35.0% | |
AATTAACAGAAAAGCCAAGC+GGG | - | chr2_1:1108822-1108841 | None:intergenic | 35.0% | |
CAATTAACAGAAAAGCCAAG+CGG | - | chr2_1:1108823-1108842 | None:intergenic | 35.0% | |
!! | GCGAATTTTGAATGCTACTT+TGG | + | chr2_1:1109064-1109083 | Msa0186410:CDS | 35.0% |
TTGTTCCAAAATTGGATCAG+CGG | + | chr2_1:1109087-1109106 | Msa0186410:CDS | 35.0% | |
! | CTCTGAAAAGTTACTGCAAA+AGG | - | chr2_1:1109238-1109257 | None:intergenic | 35.0% |
CAGAGATCTTTGATGTTGAT+TGG | + | chr2_1:1109253-1109272 | Msa0186410:CDS | 35.0% | |
AAAATCGAACTGAGAAACGA+AGG | - | chr2_1:1109520-1109539 | None:intergenic | 35.0% | |
TTGTCCAAATCTCTATGTGA+TGG | + | chr2_1:1109606-1109625 | Msa0186410:intron | 35.0% | |
TCATTAGGCTACTGATCTAT+TGG | + | chr2_1:1109696-1109715 | Msa0186410:intron | 35.0% | |
GATCACTTGGCAAATAGAAA+AGG | - | chr2_1:1109863-1109882 | None:intergenic | 35.0% | |
CAAATCATGGGGGAAAAATA+TGG | - | chr2_1:1109916-1109935 | None:intergenic | 35.0% | |
AAAAGCAAAAAAAGGCCAGT+TGG | - | chr2_1:1110159-1110178 | None:intergenic | 35.0% | |
! | TGTTGCTTCATTTATATGGC+AGG | + | chr2_1:1110274-1110293 | Msa0186410:intron | 35.0% |
AACTCAACAAGTTTGACTAC+AGG | + | chr2_1:1110303-1110322 | Msa0186410:CDS | 35.0% | |
ATTACATTGCACTGCATTTG+AGG | + | chr2_1:1110456-1110475 | Msa0186410:CDS | 35.0% | |
ACAGACAAGCGTATAAAAGA+GGG | - | chr2_1:1110500-1110519 | None:intergenic | 35.0% | |
AGGACATTGATCGACATATA+TGG | - | chr2_1:1110608-1110627 | None:intergenic | 35.0% | |
TTCAGTTCTTACTTTCATGC+TGG | + | chr2_1:1110670-1110689 | Msa0186410:intron | 35.0% | |
TTGCACAAATATGGAACACA+TGG | + | chr2_1:1110744-1110763 | Msa0186410:intron | 35.0% | |
! | CACATGGATGTTCATTTTCT+TGG | + | chr2_1:1110760-1110779 | Msa0186410:intron | 35.0% |
! | CATGGATGTTCATTTTCTTG+GGG | + | chr2_1:1110762-1110781 | Msa0186410:intron | 35.0% |
! | ATGGATGTTCATTTTCTTGG+GGG | + | chr2_1:1110763-1110782 | Msa0186410:intron | 35.0% |
GGTTTAGATAGGGAACTATA+AGG | + | chr2_1:1110888-1110907 | Msa0186410:intron | 35.0% | |
GTTGTGCCCATTTAGATAAA+AGG | + | chr2_1:1110938-1110957 | Msa0186410:intron | 35.0% | |
! | CTCTCCTCCTTTTATCTAAA+TGG | - | chr2_1:1110948-1110967 | None:intergenic | 35.0% |
! | ATTTTCAGCCTTTACTACAG+TGG | + | chr2_1:1111080-1111099 | Msa0186410:intron | 35.0% |
TTACATTGCCACTGTAGTAA+AGG | - | chr2_1:1111091-1111110 | None:intergenic | 35.0% | |
!! | AACTCAATTGGTTTGAGGTA+AGG | + | chr2_1:1111214-1111233 | Msa0186410:intron | 35.0% |
!! | ACTCAATTGGTTTGAGGTAA+GGG | + | chr2_1:1111215-1111234 | Msa0186410:intron | 35.0% |
GGAGGAATAAGAAAGGAAAT+TGG | - | chr2_1:1111519-1111538 | None:intergenic | 35.0% | |
ATAGCATACATTTGGAGGAA+TGG | - | chr2_1:1111540-1111559 | None:intergenic | 35.0% | |
TCACCTACTATCACATTTGA+GGG | - | chr2_1:1111651-1111670 | None:intergenic | 35.0% | |
ACTCGATTTATACTACTCCT+TGG | - | chr2_1:1111675-1111694 | None:intergenic | 35.0% | |
ATATCTTATGTGACAGTCTC+GGG | - | chr2_1:1111879-1111898 | None:intergenic | 35.0% | |
CATATCTTATGTGACAGTCT+CGG | - | chr2_1:1111880-1111899 | None:intergenic | 35.0% | |
AGACTGTCACATAAGATATG+AGG | + | chr2_1:1111880-1111899 | Msa0186410:intron | 35.0% | |
GACTGTCACATAAGATATGA+GGG | + | chr2_1:1111881-1111900 | Msa0186410:intron | 35.0% | |
AAGATATGAGGGATGTCAAA+AGG | + | chr2_1:1111892-1111911 | Msa0186410:intron | 35.0% | |
ATGATATAAGGTCCACTTCA+GGG | - | chr2_1:1112067-1112086 | None:intergenic | 35.0% | |
AAGTGGACCTTATATCATCT+TGG | + | chr2_1:1112069-1112088 | Msa0186410:intron | 35.0% | |
GTTTCATCTACAATGATCAG+TGG | - | chr2_1:1112261-1112280 | None:intergenic | 35.0% | |
!!! | TCTGGCTTTTTTGTCTGATT+TGG | + | chr2_1:1112333-1112352 | Msa0186410:intron | 35.0% |
!! | CTTTTGTTGTCAAATCCCAA+CGG | + | chr2_1:1112383-1112402 | Msa0186410:intron | 35.0% |
!! | TTTTGTTGTCAAATCCCAAC+GGG | + | chr2_1:1112384-1112403 | Msa0186410:intron | 35.0% |
!!! | ATTGGGTTTTAGATGGATTG+AGG | + | chr2_1:1112416-1112435 | Msa0186410:intron | 35.0% |
!! | AGATGGATTGAGGATGAATT+TGG | + | chr2_1:1112426-1112445 | Msa0186410:intron | 35.0% |
ACTGTCCGATCTTAATTGAA+CGG | + | chr2_1:1112569-1112588 | Msa0186410:intron | 35.0% | |
CTCTTACTCTGTCTCAAATT+AGG | + | chr2_1:1112712-1112731 | Msa0186410:intron | 35.0% | |
ATTCTCTCTGTTGCCAATTT+CGG | + | chr2_1:1112943-1112962 | Msa0186410:intron | 35.0% | |
!!! | TTTTTTCGGACAGCAAACAA+TGG | + | chr2_1:1113198-1113217 | Msa0186410:intron | 35.0% |
ACACTTGTATAGATCCTATC+AGG | + | chr2_1:1113226-1113245 | Msa0186410:intron | 35.0% | |
CACTTGTATAGATCCTATCA+GGG | + | chr2_1:1113227-1113246 | Msa0186410:intron | 35.0% | |
TATCTATTACTCTCCCTGAT+AGG | - | chr2_1:1113243-1113262 | None:intergenic | 35.0% | |
! | ACAGTTTTCTCATGCAAACA+TGG | - | chr2_1:1113696-1113715 | None:intergenic | 35.0% |
! | TTAGGGAATAATGCTTTGAG+AGG | - | chr2_1:1113914-1113933 | None:intergenic | 35.0% |
AAAAGAAACCATTGCTACCA+AGG | + | chr2_1:1113943-1113962 | Msa0186410:CDS | 35.0% | |
! | TTCTTCATTTTCTTCTCGCA+TGG | + | chr2_1:1113982-1114001 | Msa0186410:CDS | 35.0% |
GTGTTTGTCACCAATAACAA+TGG | + | chr2_1:1114040-1114059 | Msa0186410:CDS | 35.0% | |
CACCAATAACAATGGTAACA+TGG | + | chr2_1:1114048-1114067 | Msa0186410:CDS | 35.0% | |
AGCCATGTTACCATTGTTAT+TGG | - | chr2_1:1114053-1114072 | None:intergenic | 35.0% | |
TAAGTGTAGATATCAGTGAC+GGG | - | chr2_1:1114143-1114162 | None:intergenic | 35.0% | |
GTAAGTGTAGATATCAGTGA+CGG | - | chr2_1:1114144-1114163 | None:intergenic | 35.0% | |
TTAGCATTTGGACGAATAGT+TGG | - | chr2_1:1114215-1114234 | None:intergenic | 35.0% | |
GCCAAATTGGACAAAAATTC+TGG | + | chr2_1:1114401-1114420 | Msa0186410:intron | 35.0% | |
CTATGAATCTCTGAACTTTG+AGG | + | chr2_1:1114577-1114596 | Msa0186410:intron | 35.0% | |
GATATAATTTCCTCCAACTC+TGG | - | chr2_1:1114605-1114624 | None:intergenic | 35.0% | |
GCACATATATTTCTCAACAC+TGG | + | chr2_1:1114745-1114764 | Msa0186410:intron | 35.0% | |
!! | TTTTAAGAGCATAATGGCCT+TGG | + | chr2_1:1114840-1114859 | Msa0186410:intron | 35.0% |
! | TGCTAAATTTTGTGGGTGTT+TGG | + | chr2_1:1114868-1114887 | Msa0186410:intron | 35.0% |
AAGTTAGCAATGAGTGGAAT+GGG | + | chr2_1:1114923-1114942 | Msa0186410:intron | 35.0% | |
ACATCTAGCTGCATACAAAA+TGG | + | chr2_1:1114960-1114979 | Msa0186410:intron | 35.0% | |
! | CATACAAAATGGAGTTTGCT+AGG | + | chr2_1:1114971-1114990 | Msa0186410:intron | 35.0% |
ACTACTGCTACATTAACTTC+GGG | - | chr2_1:1115127-1115146 | None:intergenic | 35.0% | |
CACTACTGCTACATTAACTT+CGG | - | chr2_1:1115128-1115147 | None:intergenic | 35.0% | |
AAAAGACTAACTACACCTAC+CGG | - | chr2_1:1115161-1115180 | None:intergenic | 35.0% | |
TCACAAATTGAATCAGTGAC+TGG | + | chr2_1:1115239-1115258 | Msa0186410:intron | 35.0% | |
TTTCGGTTCATCGAAATTGG+AGG | - | chr2_1:1107227-1107246 | None:intergenic | 40.0% | |
AGATATCACGATAGTTCACG+TGG | + | chr2_1:1107283-1107302 | Msa0186410:five_prime_UTR | 40.0% | |
GATATCACGATAGTTCACGT+GGG | + | chr2_1:1107284-1107303 | Msa0186410:five_prime_UTR | 40.0% | |
ACAAAACTGTATGGCAACGA+AGG | + | chr2_1:1107350-1107369 | Msa0186410:five_prime_UTR | 40.0% | |
TGTGAATGATGAACGTTGCT+GGG | - | chr2_1:1107406-1107425 | None:intergenic | 40.0% | |
CATCAATAATCACTTCCCGA+AGG | + | chr2_1:1107487-1107506 | Msa0186410:five_prime_UTR | 40.0% | |
TTTCTCTCCCTTGTGAGAAT+GGG | - | chr2_1:1107673-1107692 | None:intergenic | 40.0% | |
! | TTTTCTCTCCCTTGTGAGAA+TGG | - | chr2_1:1107674-1107693 | None:intergenic | 40.0% |
AAACAAAAATGGCGGTTCAG+CGG | + | chr2_1:1107696-1107715 | Msa0186410:exon | 40.0% | |
TCGATTCCGATCATATACAC+CGG | + | chr2_1:1107831-1107850 | Msa0186410:CDS | 40.0% | |
AGAGATTTACCGTGATGTGT+TGG | - | chr2_1:1107862-1107881 | None:intergenic | 40.0% | |
!! | AAAAAGCACTAACCGGAACA+CGG | - | chr2_1:1108023-1108042 | None:intergenic | 40.0% |
TGTGTGGAGTTCGAGAAATT+CGG | + | chr2_1:1108154-1108173 | Msa0186410:CDS | 40.0% | |
AAGCAGCTACAAAACCGAAT+CGG | + | chr2_1:1108315-1108334 | Msa0186410:CDS | 40.0% | |
! | TTGTTGATTGCAACTAGTGG+AGG | + | chr2_1:1108341-1108360 | Msa0186410:CDS | 40.0% |
GGCTTGAATCAACAAAGAAC+TGG | + | chr2_1:1108362-1108381 | Msa0186410:CDS | 40.0% | |
GGGTAGGATCTGAAAACATA+AGG | - | chr2_1:1108802-1108821 | None:intergenic | 40.0% | |
AGCTGAGTACCCATATAGTT+TGG | - | chr2_1:1108979-1108998 | None:intergenic | 40.0% | |
! | TAAGACCGCTGATCCAATTT+TGG | - | chr2_1:1109095-1109114 | None:intergenic | 40.0% |
GGTCTTACTGGAAAGATTCT+AGG | + | chr2_1:1109108-1109127 | Msa0186410:CDS | 40.0% | |
CATCTTTCACTGCATTTCCT+TGG | - | chr2_1:1109372-1109391 | None:intergenic | 40.0% | |
! | AAGGCACCTCCTACTTAAAA+AGG | - | chr2_1:1109501-1109520 | None:intergenic | 40.0% |
GCATCCATCACATAGAGATT+TGG | - | chr2_1:1109613-1109632 | None:intergenic | 40.0% | |
!! | TGAATTTTAACCCCGATGTG+TGG | + | chr2_1:1109727-1109746 | Msa0186410:intron | 40.0% |
CTTGACTGAGAAGTTACTTC+AGG | - | chr2_1:1109755-1109774 | None:intergenic | 40.0% | |
AGTAACTTCTCAGTCAAGCT+AGG | + | chr2_1:1109757-1109776 | Msa0186410:intron | 40.0% | |
GATCGGTAAATCTTAGAGCA+TGG | - | chr2_1:1110382-1110401 | None:intergenic | 40.0% | |
TGGGTCAAAAATTGGTCCAA+CGG | + | chr2_1:1110414-1110433 | Msa0186410:CDS | 40.0% | |
AAAAATTGGTCCAACGGATG+AGG | + | chr2_1:1110420-1110439 | Msa0186410:CDS | 40.0% | |
GACAGACAAGCGTATAAAAG+AGG | - | chr2_1:1110501-1110520 | None:intergenic | 40.0% | |
CCTGGGAAAGTGAATTAAAC+AGG | - | chr2_1:1110523-1110542 | None:intergenic | 40.0% | |
CCTGTTTAATTCACTTTCCC+AGG | + | chr2_1:1110520-1110539 | Msa0186410:intron | 40.0% | |
TAAATGGGCACAACTTCAAC+AGG | - | chr2_1:1110932-1110951 | None:intergenic | 40.0% | |
GTGCCCATTTAGATAAAAGG+AGG | + | chr2_1:1110941-1110960 | Msa0186410:intron | 40.0% | |
! | GGTTTGAGGTAAGGGATTAA+AGG | + | chr2_1:1111223-1111242 | Msa0186410:intron | 40.0% |
AGGTAAGGGATTAAAGGAGT+TGG | + | chr2_1:1111229-1111248 | Msa0186410:intron | 40.0% | |
GGTAAGGGATTAAAGGAGTT+GGG | + | chr2_1:1111230-1111249 | Msa0186410:intron | 40.0% | |
GTAAGGGATTAAAGGAGTTG+GGG | + | chr2_1:1111231-1111250 | Msa0186410:intron | 40.0% | |
GGGGAGTTAAAAAAAGTCCA+AGG | + | chr2_1:1111250-1111269 | Msa0186410:intron | 40.0% | |
!! | AAAGTCCAAGGTTTTAGCCT+TGG | + | chr2_1:1111262-1111281 | Msa0186410:intron | 40.0% |
! | TGATACTTTTCTCCTTGCCA+AGG | - | chr2_1:1111282-1111301 | None:intergenic | 40.0% |
CCAGGGACTCTAATTTAACT+TGG | - | chr2_1:1111363-1111382 | None:intergenic | 40.0% | |
CCAAGTTAAATTAGAGTCCC+TGG | + | chr2_1:1111360-1111379 | Msa0186410:intron | 40.0% | |
CTATGTTAGAGAAGATGCCA+GGG | - | chr2_1:1111380-1111399 | None:intergenic | 40.0% | |
TCTATGTTAGAGAAGATGCC+AGG | - | chr2_1:1111381-1111400 | None:intergenic | 40.0% | |
GAGGAATGGAGGAATAAGAA+AGG | - | chr2_1:1111526-1111545 | None:intergenic | 40.0% | |
GCCTGCTATCAAATTACACA+CGG | + | chr2_1:1111571-1111590 | Msa0186410:intron | 40.0% | |
! | TCCGTGTGTAATTTGATAGC+AGG | - | chr2_1:1111575-1111594 | None:intergenic | 40.0% |
ACCTACTATCACATTTGAGG+GGG | - | chr2_1:1111649-1111668 | None:intergenic | 40.0% | |
CACCTACTATCACATTTGAG+GGG | - | chr2_1:1111650-1111669 | None:intergenic | 40.0% | |
CTCACCTACTATCACATTTG+AGG | - | chr2_1:1111652-1111671 | None:intergenic | 40.0% | |
GTATAAATCGAGTGTCTCTG+AGG | + | chr2_1:1111682-1111701 | Msa0186410:intron | 40.0% | |
! | TCTTTGAGTAGAGAGAGCAT+TGG | + | chr2_1:1111713-1111732 | Msa0186410:intron | 40.0% |
TGGTTAAAATATCAGCCAGC+TGG | + | chr2_1:1111733-1111752 | Msa0186410:intron | 40.0% | |
!!! | CGTATTTTAAGGCCATGAGT+TGG | - | chr2_1:1112043-1112062 | None:intergenic | 40.0% |
! | CACTTCAGGGTCGTATTTTA+AGG | - | chr2_1:1112054-1112073 | None:intergenic | 40.0% |
CTTAAAATACGACCCTGAAG+TGG | + | chr2_1:1112052-1112071 | Msa0186410:intron | 40.0% | |
GATGATATAAGGTCCACTTC+AGG | - | chr2_1:1112068-1112087 | None:intergenic | 40.0% | |
!! | TTACAAGGCACTGATAGTCA+TGG | - | chr2_1:1112169-1112188 | None:intergenic | 40.0% |
! | TTTGTTGTCAAATCCCAACG+GGG | + | chr2_1:1112385-1112404 | Msa0186410:intron | 40.0% |
GGATTGAGGATGAATTTGGA+TGG | + | chr2_1:1112430-1112449 | Msa0186410:intron | 40.0% | |
ATGAAATAAGGGAACCCACT+TGG | + | chr2_1:1112859-1112878 | Msa0186410:intron | 40.0% | |
TGAAATAAGGGAACCCACTT+GGG | + | chr2_1:1112860-1112879 | Msa0186410:intron | 40.0% | |
ATTGAACCTAAGACCTTGAG+AGG | - | chr2_1:1112925-1112944 | None:intergenic | 40.0% | |
TTCTCTCTGTTGCCAATTTC+GGG | + | chr2_1:1112944-1112963 | Msa0186410:intron | 40.0% | |
GAGACCTTCGTATTTAGACT+AGG | + | chr2_1:1113135-1113154 | Msa0186410:intron | 40.0% | |
TGGACCTAGTCTAAATACGA+AGG | - | chr2_1:1113142-1113161 | None:intergenic | 40.0% | |
TCCATATTACAGACTGCACT+TGG | + | chr2_1:1113158-1113177 | Msa0186410:intron | 40.0% | |
ACCAAGTGCAGTCTGTAATA+TGG | - | chr2_1:1113162-1113181 | None:intergenic | 40.0% | |
AAGTTCGATCCACTTCTTTC+TGG | + | chr2_1:1113280-1113299 | Msa0186410:intron | 40.0% | |
AAATCTGCACCAGAAAGAAG+TGG | - | chr2_1:1113292-1113311 | None:intergenic | 40.0% | |
CCAGAAAATGCAAGCATATC+AGG | - | chr2_1:1113318-1113337 | None:intergenic | 40.0% | |
! | CCTGATATGCTTGCATTTTC+TGG | + | chr2_1:1113315-1113334 | Msa0186410:CDS | 40.0% |
! | GCATTTTCTGGATGTGACTA+TGG | + | chr2_1:1113327-1113346 | Msa0186410:CDS | 40.0% |
! | TTTTCTGGATGTGACTATGG+TGG | + | chr2_1:1113330-1113349 | Msa0186410:CDS | 40.0% |
AGAGAAGGAACATAAGGAAC+TGG | + | chr2_1:1113356-1113375 | Msa0186410:CDS | 40.0% | |
GAGAAGGAACATAAGGAACT+GGG | + | chr2_1:1113357-1113376 | Msa0186410:CDS | 40.0% | |
GATGGAAGACACTACATGTA+AGG | + | chr2_1:1113394-1113413 | Msa0186410:intron | 40.0% | |
TGGCTAGATGCCAAGTAAAT+AGG | + | chr2_1:1113641-1113660 | Msa0186410:intron | 40.0% | |
TTTCTCATGCAAACATGGTC+AGG | - | chr2_1:1113691-1113710 | None:intergenic | 40.0% | |
TGCAGAAAAGCAATCCTGAT+AGG | + | chr2_1:1113756-1113775 | Msa0186410:intron | 40.0% | |
GCAGAAAAGCAATCCTGATA+GGG | + | chr2_1:1113757-1113776 | Msa0186410:intron | 40.0% | |
!! | AAATGGTTCTAGTTCCTCCT+TGG | - | chr2_1:1113963-1113982 | None:intergenic | 40.0% |
CTAAAATATTAGCCGGACGA+AGG | + | chr2_1:1114071-1114090 | Msa0186410:CDS | 40.0% | |
TGAACAGAAGTAACTCGACT+TGG | + | chr2_1:1114255-1114274 | Msa0186410:CDS | 40.0% | |
GAACAGAAGTAACTCGACTT+GGG | + | chr2_1:1114256-1114275 | Msa0186410:CDS | 40.0% | |
! | TTTCTGGAAAGTACGAACAC+TGG | - | chr2_1:1114294-1114313 | None:intergenic | 40.0% |
AGTGTTCGTACTTTCCAGAA+AGG | + | chr2_1:1114293-1114312 | Msa0186410:CDS | 40.0% | |
TACTTTCCAGAAAGGCTTCA+TGG | + | chr2_1:1114301-1114320 | Msa0186410:CDS | 40.0% | |
ACTTTCCAGAAAGGCTTCAT+GGG | + | chr2_1:1114302-1114321 | Msa0186410:CDS | 40.0% | |
TCTTCACATATGCAGGTAGA+TGG | - | chr2_1:1114374-1114393 | None:intergenic | 40.0% | |
CACAGAATCTTCACATATGC+AGG | - | chr2_1:1114381-1114400 | None:intergenic | 40.0% | |
CTGCATATGTGAAGATTCTG+TGG | + | chr2_1:1114379-1114398 | Msa0186410:intron | 40.0% | |
TGAAGATTCTGTGGCCAAAT+TGG | + | chr2_1:1114388-1114407 | Msa0186410:intron | 40.0% | |
AGTTGTAGCAAATGATGAGG+TGG | + | chr2_1:1114460-1114479 | Msa0186410:intron | 40.0% | |
!! | GGATGTTGATGATAATGACG+AGG | + | chr2_1:1114481-1114500 | Msa0186410:intron | 40.0% |
GTTATGTCGAATGAGTCAAC+AGG | - | chr2_1:1114662-1114681 | None:intergenic | 40.0% | |
GATCAGAAGTTAGCAATGAG+TGG | + | chr2_1:1114917-1114936 | Msa0186410:intron | 40.0% | |
GAAGTTAGCAATGAGTGGAA+TGG | + | chr2_1:1114922-1114941 | Msa0186410:intron | 40.0% | |
GTATGCAGCTAGATGTCAAA+TGG | - | chr2_1:1114956-1114975 | None:intergenic | 40.0% | |
!! | AATGGAGTTTGCTAGGATGT+AGG | + | chr2_1:1114978-1114997 | Msa0186410:intron | 40.0% |
TCGGGCACAAAAACTTAACT+AGG | - | chr2_1:1115109-1115128 | None:intergenic | 40.0% | |
CGAAGTTAATGTAGCAGTAG+TGG | + | chr2_1:1115126-1115145 | Msa0186410:intron | 40.0% | |
AAAGACTAACTACACCTACC+GGG | - | chr2_1:1115160-1115179 | None:intergenic | 40.0% | |
! | GCTCTTTTGTATAGAGCAGT+CGG | + | chr2_1:1115291-1115310 | Msa0186410:intron | 40.0% |
CGCTTTCGGTTCATCGAAAT+TGG | - | chr2_1:1107230-1107249 | None:intergenic | 45.0% | |
! | AACAAACGGGAGTACGCTTT+CGG | - | chr2_1:1107244-1107263 | None:intergenic | 45.0% |
AAACTGTATGGCAACGAAGG+CGG | + | chr2_1:1107353-1107372 | Msa0186410:five_prime_UTR | 45.0% | |
GTGTGAATGATGAACGTTGC+TGG | - | chr2_1:1107407-1107426 | None:intergenic | 45.0% | |
!! | GGAAGCGTTGATAAAAGTGG+TGG | - | chr2_1:1107727-1107746 | None:intergenic | 45.0% |
!! | GACGGAAGCGTTGATAAAAG+TGG | - | chr2_1:1107730-1107749 | None:intergenic | 45.0% |
GAAGAGAAAAAGTAGAGCGG+CGG | - | chr2_1:1107780-1107799 | None:intergenic | 45.0% | |
TGATCGGAATCGATAGGAGA+AGG | - | chr2_1:1107824-1107843 | None:intergenic | 45.0% | |
AAAACCTGAGTTCCGTGTTC+CGG | + | chr2_1:1108008-1108027 | Msa0186410:CDS | 45.0% | |
!!! | GTTCCGGTTAGTGCTTTTTC+TGG | + | chr2_1:1108024-1108043 | Msa0186410:intron | 45.0% |
! | AAGAACTGGGGTACTTTCTC+TGG | + | chr2_1:1108376-1108395 | Msa0186410:intron | 45.0% |
!! | GGGACTAAATTTGTTGGAGC+TGG | + | chr2_1:1108579-1108598 | Msa0186410:intron | 45.0% |
TTTCTCGAGTCTAGTGCTCA+TGG | + | chr2_1:1108659-1108678 | Msa0186410:intron | 45.0% | |
! | AAGTCTTGTCCCACTAAGTG+GGG | - | chr2_1:1108747-1108766 | None:intergenic | 45.0% |
! | CAAGTCTTGTCCCACTAAGT+GGG | - | chr2_1:1108748-1108767 | None:intergenic | 45.0% |
AATTGGATCAGCGGTCTTAC+TGG | + | chr2_1:1109096-1109115 | Msa0186410:CDS | 45.0% | |
AAGCAACTCCCAAGCAGTAA+GGG | + | chr2_1:1109312-1109331 | Msa0186410:CDS | 45.0% | |
!!! | ACACGCTTTTTCACGAGTAC+AGG | - | chr2_1:1109414-1109433 | None:intergenic | 45.0% |
TTACTTCAGGCACCACACAT+CGG | - | chr2_1:1109742-1109761 | None:intergenic | 45.0% | |
AAGCTGTAGTCTGTACCAAC+TGG | + | chr2_1:1110141-1110160 | Msa0186410:intron | 45.0% | |
TTGACTACAGGCTTGCAAAC+AGG | + | chr2_1:1110315-1110334 | Msa0186410:CDS | 45.0% | |
TCTTTCTCATCCTCATCCGT+TGG | - | chr2_1:1110433-1110452 | None:intergenic | 45.0% | |
GCATACATTTGGAGGAATGG+AGG | - | chr2_1:1111537-1111556 | None:intergenic | 45.0% | |
CCTACTATCACATTTGAGGG+GGG | - | chr2_1:1111648-1111667 | None:intergenic | 45.0% | |
ATGTGATAGTAGGTGAGCCA+AGG | + | chr2_1:1111655-1111674 | Msa0186410:intron | 45.0% | |
GTCTAAGAAACAACCTCTGG+TGG | - | chr2_1:1112010-1112029 | None:intergenic | 45.0% | |
GTGGTCTAAGAAACAACCTC+TGG | - | chr2_1:1112013-1112032 | None:intergenic | 45.0% | |
ACCACCAAGAAACCAACTCA+TGG | + | chr2_1:1112028-1112047 | Msa0186410:intron | 45.0% | |
!! | AAGGCCATGAGTTGGTTTCT+TGG | - | chr2_1:1112035-1112054 | None:intergenic | 45.0% |
TTGTTGTCAAATCCCAACGG+GGG | + | chr2_1:1112386-1112405 | Msa0186410:intron | 45.0% | |
CCAATTTACATTCCCCCGTT+GGG | - | chr2_1:1112401-1112420 | None:intergenic | 45.0% | |
CCAACGGGGGAATGTAAATT+GGG | + | chr2_1:1112399-1112418 | Msa0186410:intron | 45.0% | |
ATATTCCGACCGTGTGAACA+CGG | - | chr2_1:1112459-1112478 | None:intergenic | 45.0% | |
TCACACGGTCGGAATATCAA+TGG | + | chr2_1:1112462-1112481 | Msa0186410:intron | 45.0% | |
! | TACAGACTGCACTTGGTAGT+TGG | + | chr2_1:1113165-1113184 | Msa0186410:intron | 45.0% |
TGGAGGAGAGAAGGAACATA+AGG | + | chr2_1:1113350-1113369 | Msa0186410:CDS | 45.0% | |
ATAAGGAACTGGGCGCAATA+AGG | + | chr2_1:1113367-1113386 | Msa0186410:CDS | 45.0% | |
ATGGTCTTTAACCCTGCTTG+TGG | + | chr2_1:1113621-1113640 | Msa0186410:intron | 45.0% | |
! | CATTAGACCGACTTCTTCTG+GGG | - | chr2_1:1113810-1113829 | None:intergenic | 45.0% |
! | GCATTAGACCGACTTCTTCT+GGG | - | chr2_1:1113811-1113830 | None:intergenic | 45.0% |
! | AGCATTAGACCGACTTCTTC+TGG | - | chr2_1:1113812-1113831 | None:intergenic | 45.0% |
!! | GGTCTAATGCTAAGAGCGTT+GGG | + | chr2_1:1113821-1113840 | Msa0186410:CDS | 45.0% |
!! | GTCTAATGCTAAGAGCGTTG+GGG | + | chr2_1:1113822-1113841 | Msa0186410:CDS | 45.0% |
! | GCATCTGGGGAAGTATATAG+AGG | + | chr2_1:1113872-1113891 | Msa0186410:intron | 45.0% |
AGAAACCATTGCTACCAAGG+AGG | + | chr2_1:1113946-1113965 | Msa0186410:CDS | 45.0% | |
! | TAGTTCCTCCTTGGTAGCAA+TGG | - | chr2_1:1113954-1113973 | None:intergenic | 45.0% |
AAGTTGAGCATACCTTCGTC+CGG | - | chr2_1:1114086-1114105 | None:intergenic | 45.0% | |
CTTTCCAGAAAGGCTTCATG+GGG | + | chr2_1:1114303-1114322 | Msa0186410:CDS | 45.0% | |
TTTCCAGAAAGGCTTCATGG+GGG | + | chr2_1:1114304-1114323 | Msa0186410:CDS | 45.0% | |
! | GAACTTTGAGGATCCAGAGT+TGG | + | chr2_1:1114589-1114608 | Msa0186410:intron | 45.0% |
ATCGAGCACTAGCTGCTTAA+GGG | - | chr2_1:1114685-1114704 | None:intergenic | 45.0% | |
AATCGAGCACTAGCTGCTTA+AGG | - | chr2_1:1114686-1114705 | None:intergenic | 45.0% | |
TTAGCAATGAGTGGAATGGG+AGG | + | chr2_1:1114926-1114945 | Msa0186410:intron | 45.0% | |
AACAGCTACAACTGAAGACG+AGG | + | chr2_1:1115318-1115337 | Msa0186410:CDS | 45.0% | |
!! | TTAATATAAAATACTAAATT+TGG | + | chr2_1:1112540-1112559 | Msa0186410:intron | 5.0% |
!! | TTAAAAAAATGAAATAAATA+AGG | + | chr2_1:1112982-1113001 | Msa0186410:intron | 5.0% |
!! | TAAAAAAATGAAATAAATAA+GGG | + | chr2_1:1112983-1113002 | Msa0186410:intron | 5.0% |
TGATGAACGTTGCTGGGTTC+TGG | - | chr2_1:1107400-1107419 | None:intergenic | 50.0% | |
TGGAGGAGGAGACACCAATT+TGG | - | chr2_1:1107643-1107662 | None:intergenic | 50.0% | |
TTGTGAGAATGGGAGAGAGG+TGG | - | chr2_1:1107663-1107682 | None:intergenic | 50.0% | |
ACCTCTCTCCCATTCTCACA+AGG | + | chr2_1:1107662-1107681 | Msa0186410:five_prime_UTR | 50.0% | |
CCTCTCTCCCATTCTCACAA+GGG | + | chr2_1:1107663-1107682 | Msa0186410:five_prime_UTR | 50.0% | |
GCGTCTCCGGTGTATATGAT+CGG | - | chr2_1:1107840-1107859 | None:intergenic | 50.0% | |
TTCTCGAACTCCACACATCG+CGG | - | chr2_1:1108151-1108170 | None:intergenic | 50.0% | |
!! | CGTACTTGGAAACTTGCTGC+TGG | - | chr2_1:1108204-1108223 | None:intergenic | 50.0% |
TTCAGCGTCTGCGATTGGAA+AGG | - | chr2_1:1108297-1108316 | None:intergenic | 50.0% | |
! | CCAAGTCTTGTCCCACTAAG+TGG | - | chr2_1:1108749-1108768 | None:intergenic | 50.0% |
CCACTTAGTGGGACAAGACT+TGG | + | chr2_1:1108746-1108765 | Msa0186410:intron | 50.0% | |
! | GTTTTCAGATCCTACCCGCT+TGG | + | chr2_1:1108805-1108824 | Msa0186410:intron | 50.0% |
AACAGAAAAGCCAAGCGGGT+AGG | - | chr2_1:1108818-1108837 | None:intergenic | 50.0% | |
CAAGCAACTCCCAAGCAGTA+AGG | + | chr2_1:1109311-1109330 | Msa0186410:CDS | 50.0% | |
AACTCCCAAGCAGTAAGGGT+CGG | + | chr2_1:1109316-1109335 | Msa0186410:CDS | 50.0% | |
CTTTCCGACCCTTACTGCTT+GGG | - | chr2_1:1109323-1109342 | None:intergenic | 50.0% | |
TGCATTTCCTTGGAACACGC+AGG | - | chr2_1:1109362-1109381 | None:intergenic | 50.0% | |
TACTTCAGGCACCACACATC+GGG | - | chr2_1:1109741-1109760 | None:intergenic | 50.0% | |
CTACAGGCTTGCAAACAGGT+TGG | + | chr2_1:1110319-1110338 | Msa0186410:CDS | 50.0% | |
CCTTGCCAAGGCTAAAACCT+TGG | - | chr2_1:1111270-1111289 | None:intergenic | 50.0% | |
!!! | CCAAGGTTTTAGCCTTGGCA+AGG | + | chr2_1:1111267-1111286 | Msa0186410:intron | 50.0% |
ACTATCACATTTGAGGGGGG+AGG | - | chr2_1:1111645-1111664 | None:intergenic | 50.0% | |
CCCCCCTCAAATGTGATAGT+AGG | + | chr2_1:1111645-1111664 | Msa0186410:intron | 50.0% | |
AGAGGCTAAATCGAGTAGCC+AGG | - | chr2_1:1111974-1111993 | None:intergenic | 50.0% | |
GGTGGCTATATCTAGTGCAG+AGG | - | chr2_1:1111992-1112011 | None:intergenic | 50.0% | |
GCACTAGATATAGCCACCAG+AGG | + | chr2_1:1111994-1112013 | Msa0186410:intron | 50.0% | |
!! | GCCATGAGTTGGTTTCTTGG+TGG | - | chr2_1:1112032-1112051 | None:intergenic | 50.0% |
TTCCCAATCTGCATCACAGC+AGG | + | chr2_1:1112097-1112116 | Msa0186410:intron | 50.0% | |
AGCCTGCTGTGATGCAGATT+GGG | - | chr2_1:1112102-1112121 | None:intergenic | 50.0% | |
TGCATCACAGCAGGCTGTTA+TGG | + | chr2_1:1112106-1112125 | Msa0186410:intron | 50.0% | |
CCCAACGGGGGAATGTAAAT+TGG | + | chr2_1:1112398-1112417 | Msa0186410:intron | 50.0% | |
CCCAATTTACATTCCCCCGT+TGG | - | chr2_1:1112402-1112421 | None:intergenic | 50.0% | |
TATTCCGACCGTGTGAACAC+GGG | - | chr2_1:1112458-1112477 | None:intergenic | 50.0% | |
ATCACCAGGCTAACCCAAGT+GGG | - | chr2_1:1112876-1112895 | None:intergenic | 50.0% | |
!! | TTGGGTTAGCCTGGTGATGT+TGG | + | chr2_1:1112878-1112897 | Msa0186410:intron | 50.0% |
! | TTAGCCTGGTGATGTTGGCT+TGG | + | chr2_1:1112883-1112902 | Msa0186410:intron | 50.0% |
!! | TAGCCTGGTGATGTTGGCTT+GGG | + | chr2_1:1112884-1112903 | Msa0186410:intron | 50.0% |
TGTGCTCCTCTCAAGGTCTT+AGG | + | chr2_1:1112916-1112935 | Msa0186410:intron | 50.0% | |
CTGTTGCCAATTTCGGGAGT+TGG | + | chr2_1:1112950-1112969 | Msa0186410:intron | 50.0% | |
! | GCCAATTTCGGGAGTTGGTT+TGG | + | chr2_1:1112955-1112974 | Msa0186410:intron | 50.0% |
GCCAAACCAACTCCCGAAAT+TGG | - | chr2_1:1112959-1112978 | None:intergenic | 50.0% | |
TCTGGATGTGACTATGGTGG+AGG | + | chr2_1:1113333-1113352 | Msa0186410:CDS | 50.0% | |
! | TGACTATGGTGGAGGAGAGA+AGG | + | chr2_1:1113341-1113360 | Msa0186410:CDS | 50.0% |
TTGGCATCTAGCCACAAGCA+GGG | - | chr2_1:1113635-1113654 | None:intergenic | 50.0% | |
AAAGCAATCCTGATAGGGCC+AGG | + | chr2_1:1113762-1113781 | Msa0186410:CDS | 50.0% | |
!! | CCGACTTCTTCTGGGGTTAA+CGG | - | chr2_1:1113803-1113822 | None:intergenic | 50.0% |
CCGTTAACCCCAGAAGAAGT+CGG | + | chr2_1:1113800-1113819 | Msa0186410:CDS | 50.0% | |
! | CGGTCTAATGCTAAGAGCGT+TGG | + | chr2_1:1113820-1113839 | Msa0186410:CDS | 50.0% |
!! | ATGCTAAGAGCGTTGGGGTA+TGG | + | chr2_1:1113827-1113846 | Msa0186410:intron | 50.0% |
CTACCAGGTCTAACCTCCTT+TGG | - | chr2_1:1114332-1114351 | None:intergenic | 50.0% | |
AAGGAGGTTAGACCTGGTAG+AGG | + | chr2_1:1114332-1114351 | Msa0186410:CDS | 50.0% | |
AGGTTAGACCTGGTAGAGGA+GGG | + | chr2_1:1114336-1114355 | Msa0186410:CDS | 50.0% | |
TCATGAAACCCTCCTCTACC+AGG | - | chr2_1:1114347-1114366 | None:intergenic | 50.0% | |
! | CTTTGAGGATCCAGAGTTGG+AGG | + | chr2_1:1114592-1114611 | Msa0186410:intron | 50.0% |
TCGAGCACTAGCTGCTTAAG+GGG | - | chr2_1:1114684-1114703 | None:intergenic | 50.0% | |
TGGCTGAGCTGAACTTGAAG+TGG | + | chr2_1:1114765-1114784 | Msa0186410:intron | 50.0% | |
TGAGAATGGGAGAGAGGTGG+AGG | - | chr2_1:1107660-1107679 | None:intergenic | 55.0% | |
CCCTTGTGAGAATGGGAGAG+AGG | - | chr2_1:1107666-1107685 | None:intergenic | 55.0% | |
CAAAAATGGCGGTTCAGCGG+CGG | + | chr2_1:1107699-1107718 | Msa0186410:exon | 55.0% | |
AAAAAGTAGAGCGGCGGCGA+CGG | - | chr2_1:1107774-1107793 | None:intergenic | 55.0% | |
CTAACCGGAACACGGAACTC+AGG | - | chr2_1:1108015-1108034 | None:intergenic | 55.0% | |
ATCCTGCTGACCCCACTTAG+TGG | + | chr2_1:1108734-1108753 | Msa0186410:intron | 55.0% | |
TCCTGCTGACCCCACTTAGT+GGG | + | chr2_1:1108735-1108754 | Msa0186410:intron | 55.0% | |
GCTTTCCGACCCTTACTGCT+TGG | - | chr2_1:1109324-1109343 | None:intergenic | 55.0% | |
CATACAGCCTGCGTGTTCCA+AGG | + | chr2_1:1109352-1109371 | Msa0186410:CDS | 55.0% | |
ACTTCAGGCACCACACATCG+GGG | - | chr2_1:1109740-1109759 | None:intergenic | 55.0% | |
CAGCCTGCTGTGATGCAGAT+TGG | - | chr2_1:1112103-1112122 | None:intergenic | 55.0% | |
GGATGGATCCCGTGTTCACA+CGG | + | chr2_1:1112447-1112466 | Msa0186410:intron | 55.0% | |
CATCACCAGGCTAACCCAAG+TGG | - | chr2_1:1112877-1112896 | None:intergenic | 55.0% | |
!! | GTGATGTTGGCTTGGGACCT+TGG | + | chr2_1:1112891-1112910 | Msa0186410:intron | 55.0% |
! | CTTGAGAGGAGCACACTCCA+AGG | - | chr2_1:1112911-1112930 | None:intergenic | 55.0% |
CTTGGAGTGTGCTCCTCTCA+AGG | + | chr2_1:1112909-1112928 | Msa0186410:intron | 55.0% | |
AGGAACTGGGCGCAATAAGG+AGG | + | chr2_1:1113370-1113389 | Msa0186410:CDS | 55.0% | |
TGGGCGCAATAAGGAGGAGA+TGG | + | chr2_1:1113376-1113395 | Msa0186410:CDS | 55.0% | |
CTTGGCATCTAGCCACAAGC+AGG | - | chr2_1:1113636-1113655 | None:intergenic | 55.0% | |
GAGCCAAAGGAGGTTAGACC+TGG | + | chr2_1:1114326-1114345 | Msa0186410:CDS | 55.0% | |
GAGGTTAGACCTGGTAGAGG+AGG | + | chr2_1:1114335-1114354 | Msa0186410:CDS | 55.0% | |
GCAGTAGTGGTCTGATGACC+CGG | + | chr2_1:1115139-1115158 | Msa0186410:intron | 55.0% | |
TAGTGGTCTGATGACCCGGT+AGG | + | chr2_1:1115143-1115162 | Msa0186410:intron | 55.0% | |
AGTTCACGTGGGCACGTGCA+AGG | + | chr2_1:1107295-1107314 | Msa0186410:five_prime_UTR | 60.0% | |
GTTCACGTGGGCACGTGCAA+GGG | + | chr2_1:1107296-1107315 | Msa0186410:five_prime_UTR | 60.0% | |
GAATGGGAGAGAGGTGGAGG+AGG | - | chr2_1:1107657-1107676 | None:intergenic | 60.0% | |
! | CCGTGATGTGTTGGCGTCTC+CGG | - | chr2_1:1107853-1107872 | None:intergenic | 60.0% |
CCGGAGACGCCAACACATCA+CGG | + | chr2_1:1107850-1107869 | Msa0186410:CDS | 60.0% | |
GAAAGCTGAGCCGCGATGTG+TGG | + | chr2_1:1108138-1108157 | Msa0186410:CDS | 60.0% | |
GCTGCTTCAGCGTCTGCGAT+TGG | - | chr2_1:1108302-1108321 | None:intergenic | 60.0% | |
TCCCACTAAGTGGGGTCAGC+AGG | - | chr2_1:1108739-1108758 | None:intergenic | 60.0% | |
!! | TCAGCCAGCTGGTCTTCTGC+AGG | + | chr2_1:1111744-1111763 | Msa0186410:intron | 60.0% |
!! | CAGCCAGCTGGTCTTCTGCA+GGG | + | chr2_1:1111745-1111764 | Msa0186410:intron | 60.0% |
CATCCCTGCAGAAGACCAGC+TGG | - | chr2_1:1111751-1111770 | None:intergenic | 60.0% | |
TTTCTGCCGCTGTTGCTGCC+TGG | + | chr2_1:1111953-1111972 | Msa0186410:intron | 60.0% | |
GAGTAGCCAGGCAGCAACAG+CGG | - | chr2_1:1111962-1111981 | None:intergenic | 60.0% | |
GGATCCCGTGTTCACACGGT+CGG | + | chr2_1:1112451-1112470 | Msa0186410:intron | 60.0% | |
!! | GGAACCCACTTGGGTTAGCC+TGG | + | chr2_1:1112869-1112888 | Msa0186410:intron | 60.0% |
GGTCCCAAGCCAACATCACC+AGG | - | chr2_1:1112890-1112909 | None:intergenic | 60.0% | |
GCAATCCTGATAGGGCCAGG+AGG | + | chr2_1:1113765-1113784 | Msa0186410:CDS | 60.0% | |
GCTCCCCCATGAAGCCTTTC+TGG | - | chr2_1:1114310-1114329 | None:intergenic | 60.0% | |
AGGCTTCATGGGGGAGCCAA+AGG | + | chr2_1:1114313-1114332 | Msa0186410:CDS | 60.0% | |
CTTCATGGGGGAGCCAAAGG+AGG | + | chr2_1:1114316-1114335 | Msa0186410:CDS | 60.0% | |
GCGGCGACGGCGGAAATCAT+CGG | - | chr2_1:1107761-1107780 | None:intergenic | 65.0% | |
TCCTGATAGGGCCAGGAGGC+AGG | + | chr2_1:1113769-1113788 | Msa0186410:CDS | 65.0% | |
CCTGATAGGGCCAGGAGGCA+GGG | + | chr2_1:1113770-1113789 | Msa0186410:CDS | 65.0% | |
CGGACATCTTCCCTGCCTCC+TGG | - | chr2_1:1113783-1113802 | None:intergenic | 65.0% | |
AAGTAGAGCGGCGGCGACGG+CGG | - | chr2_1:1107771-1107790 | None:intergenic | 70.0% | |
CCCTGCCTCCTGGCCCTATC+AGG | - | chr2_1:1113773-1113792 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_1 | gene | 1107219 | 1115351 | 1107219 | ID=Msa0186410;Name=Msa0186410 |
chr2_1 | mRNA | 1107219 | 1115351 | 1107219 | ID=Msa0186410-mRNA-1;Parent=Msa0186410;Name=Msa0186410-mRNA-1;_AED=0.21;_eAED=0.21;_QI=485|0.81|0.66|0.91|0.90|0.91|12|0|492 |
chr2_1 | exon | 1107219 | 1107871 | 1107219 | ID=Msa0186410-mRNA-1:exon:465;Parent=Msa0186410-mRNA-1 |
chr2_1 | exon | 1107979 | 1108029 | 1107979 | ID=Msa0186410-mRNA-1:exon:466;Parent=Msa0186410-mRNA-1 |
chr2_1 | exon | 1108128 | 1108218 | 1108128 | ID=Msa0186410-mRNA-1:exon:467;Parent=Msa0186410-mRNA-1 |
chr2_1 | exon | 1108309 | 1108385 | 1108309 | ID=Msa0186410-mRNA-1:exon:468;Parent=Msa0186410-mRNA-1 |
chr2_1 | exon | 1109041 | 1109129 | 1109041 | ID=Msa0186410-mRNA-1:exon:469;Parent=Msa0186410-mRNA-1 |
chr2_1 | exon | 1109245 | 1109431 | 1109245 | ID=Msa0186410-mRNA-1:exon:470;Parent=Msa0186410-mRNA-1 |
chr2_1 | exon | 1110296 | 1110477 | 1110296 | ID=Msa0186410-mRNA-1:exon:471;Parent=Msa0186410-mRNA-1 |
chr2_1 | exon | 1113308 | 1113410 | 1113308 | ID=Msa0186410-mRNA-1:exon:472;Parent=Msa0186410-mRNA-1 |
chr2_1 | exon | 1113761 | 1113843 | 1113761 | ID=Msa0186410-mRNA-1:exon:473;Parent=Msa0186410-mRNA-1 |
chr2_1 | exon | 1113892 | 1114092 | 1113892 | ID=Msa0186410-mRNA-1:exon:474;Parent=Msa0186410-mRNA-1 |
chr2_1 | exon | 1114193 | 1114397 | 1114193 | ID=Msa0186410-mRNA-1:exon:475;Parent=Msa0186410-mRNA-1 |
chr2_1 | exon | 1115310 | 1115351 | 1115310 | ID=Msa0186410-mRNA-1:exon:476;Parent=Msa0186410-mRNA-1 |
chr2_1 | five_prime_UTR | 1107219 | 1107703 | 1107219 | ID=Msa0186410-mRNA-1:five_prime_utr;Parent=Msa0186410-mRNA-1 |
chr2_1 | CDS | 1107704 | 1107871 | 1107704 | ID=Msa0186410-mRNA-1:cds;Parent=Msa0186410-mRNA-1 |
chr2_1 | CDS | 1107979 | 1108029 | 1107979 | ID=Msa0186410-mRNA-1:cds;Parent=Msa0186410-mRNA-1 |
chr2_1 | CDS | 1108128 | 1108218 | 1108128 | ID=Msa0186410-mRNA-1:cds;Parent=Msa0186410-mRNA-1 |
chr2_1 | CDS | 1108309 | 1108385 | 1108309 | ID=Msa0186410-mRNA-1:cds;Parent=Msa0186410-mRNA-1 |
chr2_1 | CDS | 1109041 | 1109129 | 1109041 | ID=Msa0186410-mRNA-1:cds;Parent=Msa0186410-mRNA-1 |
chr2_1 | CDS | 1109245 | 1109431 | 1109245 | ID=Msa0186410-mRNA-1:cds;Parent=Msa0186410-mRNA-1 |
chr2_1 | CDS | 1110296 | 1110477 | 1110296 | ID=Msa0186410-mRNA-1:cds;Parent=Msa0186410-mRNA-1 |
chr2_1 | CDS | 1113308 | 1113410 | 1113308 | ID=Msa0186410-mRNA-1:cds;Parent=Msa0186410-mRNA-1 |
chr2_1 | CDS | 1113761 | 1113843 | 1113761 | ID=Msa0186410-mRNA-1:cds;Parent=Msa0186410-mRNA-1 |
chr2_1 | CDS | 1113892 | 1114092 | 1113892 | ID=Msa0186410-mRNA-1:cds;Parent=Msa0186410-mRNA-1 |
chr2_1 | CDS | 1114193 | 1114397 | 1114193 | ID=Msa0186410-mRNA-1:cds;Parent=Msa0186410-mRNA-1 |
chr2_1 | CDS | 1115310 | 1115351 | 1115310 | ID=Msa0186410-mRNA-1:cds;Parent=Msa0186410-mRNA-1 |
Gene Sequence |
Protein sequence |