Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0186410 | XP_013462262.1 | 94.578 | 498 | 11 | 1 | 1 | 482 | 1 | 498 | 0.0 | 980 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0186410 | sp|Q949U4|OFT16_ARATH | 69.478 | 498 | 130 | 3 | 1 | 482 | 1 | 492 | 0.0 | 733 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0186410 | A0A072V388 | 94.578 | 498 | 11 | 1 | 1 | 482 | 1 | 498 | 0.0 | 980 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0076170 | Msa0186410 | 0.803047 | 4.199384e-49 | -8.615850e-47 |
| Msa0104140 | Msa0186410 | 0.819732 | 9.953159e-53 | -8.615850e-47 |
| Msa0140880 | Msa0186410 | 0.822697 | 2.061626e-53 | -8.615850e-47 |
| Msa0186410 | Msa0268110 | 0.822566 | 2.211447e-53 | -8.615850e-47 |
| Msa0186410 | Msa0309720 | 0.803206 | 3.893653e-49 | -8.615850e-47 |
| Msa0186410 | Msa0369420 | 0.803948 | 2.732117e-49 | -8.615850e-47 |
| Msa0186410 | Msa0385830 | 0.899655 | 1.597836e-77 | -8.615850e-47 |
| Msa0186410 | Msa0523290 | 0.866592 | 2.547408e-65 | -8.615850e-47 |
| Msa0186410 | Msa0586450 | 0.818850 | 1.580719e-52 | -8.615850e-47 |
| Msa0186410 | Msa0626270 | 0.805541 | 1.270045e-49 | -8.615850e-47 |
| Msa0186410 | Msa0626460 | 0.827160 | 1.824091e-54 | -8.615850e-47 |
| Msa0186410 | Msa0664540 | 0.801068 | 1.072152e-48 | -8.615850e-47 |
| Msa0186410 | Msa0784220 | 0.813957 | 1.967673e-51 | -8.615850e-47 |
| Msa0186410 | Msa1031390 | 0.801662 | 8.100571e-49 | -8.615850e-47 |
| Msa0186410 | Msa1165090 | 0.817380 | 3.398254e-52 | -8.615850e-47 |
| Msa0186410 | Msa1219830 | 0.823442 | 1.382291e-53 | -8.615850e-47 |
| Msa0186410 | Msa1267040 | 0.820784 | 5.711135e-53 | -8.615850e-47 |
| Msa0186410 | Msa1267170 | 0.817116 | 3.897202e-52 | -8.615850e-47 |
| Msa0186410 | Msa1393820 | 0.800399 | 1.467987e-48 | -8.615850e-47 |
| Msa0186410 | Msa1440900 | 0.810696 | 1.013770e-50 | -8.615850e-47 |
| Msa0186410 | Msa1460880 | 0.822514 | 2.274958e-53 | -8.615850e-47 |
| Msa0186410 | Msa1464370 | 0.829121 | 6.146389e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0186410 | MtrunA17_Chr3g0143821 | 94.578 | 498 | 11 | 1 | 1 | 482 | 1 | 498 | 0.0 | 980 |
| Msa0186410 | MtrunA17_Chr5g0448581 | 63.410 | 481 | 148 | 4 | 22 | 485 | 39 | 508 | 0.0 | 638 |
| Msa0186410 | MtrunA17_Chr4g0056061 | 61.017 | 413 | 143 | 3 | 82 | 477 | 79 | 490 | 0.0 | 525 |
| Msa0186410 | MtrunA17_Chr5g0399311 | 55.485 | 474 | 180 | 6 | 22 | 477 | 46 | 506 | 0.0 | 521 |
| Msa0186410 | MtrunA17_Chr3g0129981 | 38.008 | 492 | 236 | 15 | 26 | 476 | 48 | 511 | 5.82e-94 | 294 |
| Msa0186410 | MtrunA17_Chr4g0042711 | 42.607 | 399 | 194 | 10 | 112 | 479 | 98 | 492 | 4.70e-91 | 286 |
| Msa0186410 | MtrunA17_Chr3g0077321 | 38.657 | 432 | 228 | 10 | 84 | 482 | 123 | 550 | 4.16e-90 | 286 |
| Msa0186410 | MtrunA17_Chr1g0160781 | 36.526 | 449 | 244 | 10 | 26 | 439 | 66 | 508 | 4.40e-90 | 285 |
| Msa0186410 | MtrunA17_Chr5g0426591 | 40.135 | 446 | 231 | 10 | 16 | 431 | 11 | 450 | 7.30e-90 | 284 |
| Msa0186410 | MtrunA17_Chr4g0008451 | 38.967 | 426 | 226 | 10 | 82 | 479 | 205 | 624 | 2.41e-89 | 286 |
| Msa0186410 | MtrunA17_Chr6g0455571 | 42.677 | 396 | 195 | 10 | 110 | 475 | 114 | 507 | 2.92e-89 | 282 |
| Msa0186410 | MtrunA17_Chr5g0417871 | 41.162 | 396 | 202 | 8 | 112 | 478 | 86 | 479 | 6.19e-89 | 280 |
| Msa0186410 | MtrunA17_Chr4g0043911 | 41.053 | 380 | 186 | 8 | 95 | 442 | 139 | 512 | 1.20e-88 | 282 |
| Msa0186410 | MtrunA17_Chr3g0132371 | 40.858 | 443 | 209 | 12 | 83 | 484 | 116 | 546 | 4.48e-88 | 280 |
| Msa0186410 | MtrunA17_Chr4g0061781 | 41.772 | 395 | 200 | 8 | 110 | 475 | 115 | 508 | 1.11e-86 | 275 |
| Msa0186410 | MtrunA17_Chr2g0307971 | 37.978 | 445 | 234 | 11 | 82 | 485 | 76 | 519 | 2.38e-85 | 272 |
| Msa0186410 | MtrunA17_Chr4g0070551 | 38.443 | 424 | 227 | 11 | 82 | 477 | 201 | 618 | 4.31e-84 | 271 |
| Msa0186410 | MtrunA17_Chr5g0436321 | 38.235 | 408 | 220 | 9 | 112 | 491 | 162 | 565 | 9.04e-84 | 269 |
| Msa0186410 | MtrunA17_Chr3g0123521 | 39.348 | 399 | 206 | 10 | 112 | 476 | 151 | 547 | 1.85e-83 | 268 |
| Msa0186410 | MtrunA17_Chr5g0424241 | 40.000 | 375 | 193 | 6 | 95 | 437 | 141 | 515 | 2.93e-80 | 261 |
| Msa0186410 | MtrunA17_Chr2g0284071 | 36.139 | 404 | 198 | 8 | 104 | 447 | 208 | 611 | 1.54e-78 | 258 |
| Msa0186410 | MtrunA17_Chr1g0204121 | 37.972 | 424 | 232 | 11 | 82 | 480 | 61 | 478 | 1.30e-77 | 251 |
| Msa0186410 | MtrunA17_Chr5g0412251 | 34.152 | 448 | 238 | 11 | 82 | 477 | 60 | 502 | 1.33e-74 | 243 |
| Msa0186410 | MtrunA17_Chr1g0204141 | 37.063 | 429 | 232 | 14 | 82 | 480 | 61 | 481 | 2.92e-73 | 240 |
| Msa0186410 | MtrunA17_Chr3g0087291 | 36.818 | 440 | 232 | 15 | 77 | 483 | 137 | 563 | 4.72e-72 | 238 |
| Msa0186410 | MtrunA17_Chr4g0075311 | 34.803 | 431 | 213 | 9 | 81 | 447 | 136 | 562 | 9.82e-70 | 233 |
| Msa0186410 | MtrunA17_Chr3g0132951 | 34.375 | 416 | 217 | 10 | 114 | 476 | 103 | 515 | 5.81e-69 | 229 |
| Msa0186410 | MtrunA17_Chr4g0010511 | 34.025 | 482 | 252 | 12 | 29 | 479 | 173 | 619 | 6.33e-67 | 226 |
| Msa0186410 | MtrunA17_Chr4g0003561 | 29.189 | 370 | 208 | 9 | 82 | 420 | 47 | 393 | 6.53e-43 | 157 |
| Msa0186410 | MtrunA17_Chr7g0220381 | 32.174 | 345 | 188 | 11 | 64 | 371 | 55 | 390 | 8.36e-41 | 155 |
| Msa0186410 | MtrunA17_Chr1g0146501 | 30.606 | 330 | 190 | 11 | 77 | 371 | 57 | 382 | 8.50e-29 | 120 |
| Msa0186410 | MtrunA17_Chr3g0127811 | 31.164 | 292 | 160 | 9 | 110 | 371 | 62 | 342 | 1.85e-26 | 112 |
| Msa0186410 | MtrunA17_Chr4g0002361 | 27.089 | 347 | 191 | 12 | 103 | 422 | 78 | 389 | 1.65e-22 | 99.8 |
| Msa0186410 | MtrunA17_Chr2g0298881 | 27.410 | 332 | 187 | 11 | 114 | 423 | 38 | 337 | 7.46e-22 | 97.1 |
| Msa0186410 | MtrunA17_Chr7g0240241 | 39.394 | 132 | 56 | 4 | 269 | 377 | 1 | 131 | 2.09e-15 | 72.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0186410 | AT1G76270.1 | 69.478 | 498 | 130 | 3 | 1 | 482 | 1 | 492 | 0.0 | 733 |
| Msa0186410 | AT1G20550.1 | 69.721 | 502 | 127 | 5 | 1 | 483 | 1 | 496 | 0.0 | 726 |
| Msa0186410 | AT4G38390.1 | 62.656 | 482 | 153 | 4 | 19 | 483 | 41 | 512 | 0.0 | 633 |
| Msa0186410 | AT4G16650.2 | 59.338 | 423 | 152 | 4 | 82 | 485 | 93 | 514 | 7.65e-170 | 490 |
| Msa0186410 | AT4G16650.1 | 59.338 | 423 | 152 | 4 | 82 | 485 | 93 | 514 | 7.65e-170 | 490 |
| Msa0186410 | AT5G15740.1 | 40.138 | 436 | 218 | 11 | 82 | 475 | 64 | 498 | 1.71e-91 | 288 |
| Msa0186410 | AT5G64600.1 | 35.306 | 507 | 269 | 13 | 23 | 482 | 26 | 520 | 4.98e-91 | 287 |
| Msa0186410 | AT2G01480.1 | 37.307 | 453 | 241 | 11 | 26 | 442 | 71 | 516 | 1.88e-87 | 279 |
| Msa0186410 | AT2G01480.2 | 37.387 | 444 | 236 | 10 | 26 | 433 | 71 | 508 | 2.35e-87 | 278 |
| Msa0186410 | AT3G02250.1 | 39.344 | 427 | 222 | 11 | 84 | 475 | 74 | 498 | 9.16e-87 | 276 |
| Msa0186410 | AT2G03280.1 | 39.394 | 429 | 217 | 11 | 88 | 475 | 54 | 480 | 1.90e-86 | 274 |
| Msa0186410 | AT1G22460.1 | 40.183 | 438 | 215 | 14 | 83 | 482 | 135 | 563 | 2.61e-86 | 276 |
| Msa0186410 | AT1G14020.1 | 37.868 | 441 | 228 | 10 | 82 | 481 | 53 | 488 | 7.05e-86 | 273 |
| Msa0186410 | AT1G35510.1 | 38.164 | 414 | 222 | 8 | 105 | 485 | 153 | 565 | 7.48e-86 | 275 |
| Msa0186410 | AT2G37980.1 | 37.200 | 500 | 250 | 17 | 27 | 479 | 136 | 618 | 1.23e-84 | 274 |
| Msa0186410 | AT5G35570.1 | 39.294 | 425 | 224 | 11 | 83 | 479 | 225 | 643 | 4.45e-84 | 273 |
| Msa0186410 | AT3G26370.1 | 39.250 | 400 | 207 | 10 | 112 | 477 | 159 | 556 | 2.13e-83 | 268 |
| Msa0186410 | AT1G14970.3 | 40.678 | 354 | 178 | 7 | 112 | 433 | 10 | 363 | 5.75e-83 | 263 |
| Msa0186410 | AT3G54100.1 | 37.939 | 427 | 229 | 11 | 82 | 479 | 195 | 614 | 5.98e-83 | 269 |
| Msa0186410 | AT1G38065.1 | 39.947 | 378 | 194 | 7 | 102 | 447 | 27 | 403 | 6.00e-83 | 265 |
| Msa0186410 | AT1G14970.2 | 40.678 | 354 | 178 | 7 | 112 | 433 | 36 | 389 | 1.18e-82 | 263 |
| Msa0186410 | AT1G38065.2 | 39.793 | 387 | 197 | 8 | 96 | 447 | 8 | 393 | 2.38e-82 | 263 |
| Msa0186410 | AT1G14970.1 | 40.678 | 354 | 178 | 7 | 112 | 433 | 156 | 509 | 3.33e-81 | 263 |
| Msa0186410 | AT1G38131.1 | 39.303 | 402 | 204 | 9 | 78 | 447 | 129 | 522 | 6.79e-81 | 263 |
| Msa0186410 | AT2G03280.2 | 38.717 | 421 | 199 | 11 | 112 | 475 | 89 | 507 | 2.59e-80 | 259 |
| Msa0186410 | AT1G04910.1 | 36.916 | 428 | 239 | 11 | 82 | 484 | 61 | 482 | 1.72e-78 | 254 |
| Msa0186410 | AT1G62330.1 | 37.343 | 399 | 187 | 7 | 112 | 447 | 222 | 620 | 1.09e-77 | 256 |
| Msa0186410 | AT5G01100.1 | 32.427 | 515 | 285 | 14 | 15 | 484 | 120 | 616 | 4.53e-77 | 254 |
| Msa0186410 | AT2G44500.1 | 37.352 | 423 | 234 | 10 | 82 | 478 | 146 | 563 | 5.61e-76 | 249 |
| Msa0186410 | AT1G11990.1 | 36.725 | 403 | 216 | 9 | 80 | 447 | 161 | 559 | 2.27e-75 | 248 |
| Msa0186410 | AT1G29200.4 | 36.854 | 426 | 207 | 10 | 112 | 477 | 71 | 494 | 3.27e-73 | 240 |
| Msa0186410 | AT1G29200.1 | 36.854 | 426 | 207 | 10 | 112 | 477 | 71 | 494 | 3.27e-73 | 240 |
| Msa0186410 | AT4G24530.1 | 33.408 | 449 | 240 | 12 | 82 | 477 | 75 | 517 | 1.19e-72 | 239 |
| Msa0186410 | AT1G29200.3 | 36.730 | 422 | 205 | 10 | 116 | 477 | 1 | 420 | 4.61e-72 | 235 |
| Msa0186410 | AT1G29200.2 | 36.854 | 426 | 207 | 10 | 112 | 477 | 187 | 610 | 5.25e-72 | 240 |
| Msa0186410 | AT5G65470.1 | 34.146 | 451 | 234 | 12 | 82 | 476 | 59 | 502 | 1.07e-71 | 236 |
| Msa0186410 | AT1G11990.2 | 30.799 | 513 | 259 | 12 | 27 | 447 | 73 | 581 | 8.19e-69 | 231 |
| Msa0186410 | AT3G07900.1 | 36.620 | 426 | 239 | 12 | 82 | 481 | 157 | 577 | 1.05e-68 | 230 |
| Msa0186410 | AT5G63390.1 | 36.150 | 426 | 234 | 11 | 70 | 464 | 115 | 533 | 5.65e-68 | 228 |
| Msa0186410 | AT3G26370.2 | 42.584 | 209 | 111 | 3 | 112 | 311 | 159 | 367 | 4.81e-47 | 168 |
| Msa0186410 | AT1G52630.1 | 29.296 | 355 | 229 | 6 | 73 | 413 | 37 | 383 | 6.22e-43 | 158 |
| Msa0186410 | AT2G44500.2 | 37.548 | 261 | 155 | 5 | 82 | 336 | 146 | 404 | 8.65e-42 | 154 |
| Msa0186410 | AT1G52630.2 | 29.568 | 301 | 191 | 5 | 127 | 413 | 2 | 295 | 1.71e-37 | 141 |
| Msa0186410 | AT3G30300.2 | 29.573 | 328 | 192 | 9 | 79 | 371 | 69 | 392 | 1.11e-33 | 135 |
| Msa0186410 | AT3G30300.1 | 29.573 | 328 | 192 | 9 | 79 | 371 | 69 | 392 | 1.11e-33 | 135 |
| Msa0186410 | AT3G03810.2 | 32.095 | 296 | 169 | 8 | 108 | 371 | 86 | 381 | 1.69e-33 | 134 |
| Msa0186410 | AT3G03810.1 | 32.095 | 296 | 169 | 8 | 108 | 371 | 86 | 381 | 1.69e-33 | 134 |
Find 132 sgRNAs with CRISPR-Local
Find 542 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCTTTCGGTTCATCGAAAT+TGG | 0.159092 | 2_1:-1107227 | None:intergenic |
| AGCATTAGACCGACTTCTTC+TGG | 0.168955 | 2_1:-1113809 | None:intergenic |
| TACTTTGGTTGTTCCAAAAT+TGG | 0.175411 | 2_1:+1109079 | Msa0186410:CDS |
| AGCCATGTTACCATTGTTAT+TGG | 0.202946 | 2_1:-1114050 | None:intergenic |
| TAAGACCGCTGATCCAATTT+TGG | 0.252503 | 2_1:-1109092 | None:intergenic |
| CCCTGCCTCCTGGCCCTATC+AGG | 0.263185 | 2_1:-1113770 | None:intergenic |
| AATTGGATCAGCGGTCTTAC+TGG | 0.268822 | 2_1:+1109096 | Msa0186410:CDS |
| CCAGAAAATGCAAGCATATC+AGG | 0.295328 | 2_1:-1113315 | None:intergenic |
| CAGAGATCTTTGATGTTGAT+TGG | 0.310241 | 2_1:+1109253 | Msa0186410:CDS |
| TGATGAACGTTGCTGGGTTC+TGG | 0.337065 | 2_1:-1107397 | None:intergenic |
| CGAGAAGAAAATGAAGAAAA+TGG | 0.344650 | 2_1:-1113977 | None:intergenic |
| AACAAACGGGAGTACGCTTT+CGG | 0.354919 | 2_1:-1107241 | None:intergenic |
| GGTCTTACTGGAAAGATTCT+AGG | 0.369144 | 2_1:+1109108 | Msa0186410:CDS |
| TTGAAATCTGTAATCTCCTT+CGG | 0.379385 | 2_1:-1107503 | None:intergenic |
| TCCTGATAGGGCCAGGAGGC+AGG | 0.383084 | 2_1:+1113769 | Msa0186410:CDS |
| GCATTAGACCGACTTCTTCT+GGG | 0.384373 | 2_1:-1113808 | None:intergenic |
| GGCTTGAATCAACAAAGAAC+TGG | 0.385240 | 2_1:+1108362 | Msa0186410:CDS |
| TACTTTCCAGAAAGGCTTCA+TGG | 0.385961 | 2_1:+1114301 | Msa0186410:CDS |
| CATCTTTCACTGCATTTCCT+TGG | 0.387886 | 2_1:-1109369 | None:intergenic |
| CCGACTTCTTCTGGGGTTAA+CGG | 0.388428 | 2_1:-1113800 | None:intergenic |
| AAAACCTGAGTTCCGTGTTC+CGG | 0.389149 | 2_1:+1108008 | Msa0186410:CDS |
| CTACCAGGTCTAACCTCCTT+TGG | 0.391129 | 2_1:-1114329 | None:intergenic |
| CTTTCCGACCCTTACTGCTT+GGG | 0.395995 | 2_1:-1109320 | None:intergenic |
| TCTTCACATATGCAGGTAGA+TGG | 0.402793 | 2_1:-1114371 | None:intergenic |
| GACATCATTTGACAAATATG+AGG | 0.410175 | 2_1:-1109280 | None:intergenic |
| AGAGAAGGAACATAAGGAAC+TGG | 0.410517 | 2_1:+1113356 | Msa0186410:CDS |
| TGAAATCTGTAATCTCCTTC+GGG | 0.412473 | 2_1:-1107502 | None:intergenic |
| TGAGAATGGGAGAGAGGTGG+AGG | 0.414329 | 2_1:-1107657 | None:intergenic |
| TTTCTCTCCCTTGTGAGAAT+GGG | 0.417335 | 2_1:-1107670 | None:intergenic |
| TGGAGGAGGAGACACCAATT+TGG | 0.420371 | 2_1:-1107640 | None:intergenic |
| CTTTCTTATAGGAGATACTT+TGG | 0.423658 | 2_1:+1114182 | Msa0186410:intron |
| ATTACATTGCACTGCATTTG+AGG | 0.426954 | 2_1:+1110456 | Msa0186410:CDS |
| TTGACTACAGGCTTGCAAAC+AGG | 0.433422 | 2_1:+1110315 | Msa0186410:CDS |
| GAATGGGAGAGAGGTGGAGG+AGG | 0.433593 | 2_1:-1107654 | None:intergenic |
| ATAAGGAACTGGGCGCAATA+AGG | 0.438812 | 2_1:+1113367 | Msa0186410:CDS |
| GGTCTAATGCTAAGAGCGTT+GGG | 0.438817 | 2_1:+1113821 | Msa0186410:CDS |
| CGGTCTAATGCTAAGAGCGT+TGG | 0.446845 | 2_1:+1113820 | Msa0186410:CDS |
| GCTTTCCGACCCTTACTGCT+TGG | 0.447208 | 2_1:-1109321 | None:intergenic |
| TTAGCATTTGGACGAATAGT+TGG | 0.451966 | 2_1:-1114212 | None:intergenic |
| CCGTGATGTGTTGGCGTCTC+CGG | 0.452493 | 2_1:-1107850 | None:intergenic |
| TAGTTCCTCCTTGGTAGCAA+TGG | 0.453907 | 2_1:-1113951 | None:intergenic |
| TGCAGAAAAGCAATCCTGAT+AGG | 0.456425 | 2_1:+1113756 | Msa0186410:intron |
| TCTTTCTCATCCTCATCCGT+TGG | 0.459648 | 2_1:-1110430 | None:intergenic |
| CATCACAAACAATAAAATCA+AGG | 0.465180 | 2_1:-1114009 | None:intergenic |
| GCAATCAACAAATACCGATT+CGG | 0.465428 | 2_1:-1108329 | None:intergenic |
| GTGTGAATGATGAACGTTGC+TGG | 0.469018 | 2_1:-1107404 | None:intergenic |
| CAAGCAACTCCCAAGCAGTA+AGG | 0.472904 | 2_1:+1109311 | Msa0186410:CDS |
| TTCCAAACAACAAAACTGTA+TGG | 0.478601 | 2_1:+1107341 | Msa0186410:five_prime_UTR |
| CACAGAATCTTCACATATGC+AGG | 0.485794 | 2_1:-1114378 | None:intergenic |
| TGTGTGGAGTTCGAGAAATT+CGG | 0.487684 | 2_1:+1108154 | Msa0186410:CDS |
| CGGACATCTTCCCTGCCTCC+TGG | 0.490472 | 2_1:-1113780 | None:intergenic |
| AACTCAACAAGTTTGACTAC+AGG | 0.491216 | 2_1:+1110303 | Msa0186410:CDS |
| AGTGTTCGTACTTTCCAGAA+AGG | 0.497793 | 2_1:+1114293 | Msa0186410:CDS |
| AAATGGTTCTAGTTCCTCCT+TGG | 0.505721 | 2_1:-1113960 | None:intergenic |
| ACTTTCCAGAAAGGCTTCAT+GGG | 0.506686 | 2_1:+1114302 | Msa0186410:CDS |
| TGAACAGAAGTAACTCGACT+TGG | 0.511215 | 2_1:+1114255 | Msa0186410:CDS |
| AGTTCACGTGGGCACGTGCA+AGG | 0.516189 | 2_1:+1107295 | Msa0186410:five_prime_UTR |
| GCGGCGACGGCGGAAATCAT+CGG | 0.525722 | 2_1:-1107758 | None:intergenic |
| TGGAGGAGAGAAGGAACATA+AGG | 0.528093 | 2_1:+1113350 | Msa0186410:CDS |
| AAAGCAATCCTGATAGGGCC+AGG | 0.532881 | 2_1:+1113762 | Msa0186410:CDS |
| AGAAATTCGGAACACTTCTA+CGG | 0.534845 | 2_1:+1108167 | Msa0186410:CDS |
| TTTCGGTTCATCGAAATTGG+AGG | 0.536443 | 2_1:-1107224 | None:intergenic |
| TCATGAAACCCTCCTCTACC+AGG | 0.538317 | 2_1:-1114344 | None:intergenic |
| TGGGCGCAATAAGGAGGAGA+TGG | 0.539483 | 2_1:+1113376 | Msa0186410:CDS |
| ACCTCTCTCCCATTCTCACA+AGG | 0.540082 | 2_1:+1107662 | Msa0186410:five_prime_UTR |
| CCTGATAGGGCCAGGAGGCA+GGG | 0.542578 | 2_1:+1113770 | Msa0186410:CDS |
| CATACAGCCTGCGTGTTCCA+AGG | 0.544507 | 2_1:+1109352 | Msa0186410:CDS |
| GAGGTTAGACCTGGTAGAGG+AGG | 0.544967 | 2_1:+1114335 | Msa0186410:CDS |
| GCAGAAAAGCAATCCTGATA+GGG | 0.548539 | 2_1:+1113757 | Msa0186410:intron |
| AAAAGAAACCATTGCTACCA+AGG | 0.549342 | 2_1:+1113943 | Msa0186410:CDS |
| AAGTAGAGCGGCGGCGACGG+CGG | 0.550184 | 2_1:-1107768 | None:intergenic |
| AAGTTGAGCATACCTTCGTC+CGG | 0.553115 | 2_1:-1114083 | None:intergenic |
| CACCAATAACAATGGTAACA+TGG | 0.554000 | 2_1:+1114048 | Msa0186410:CDS |
| TGACTATGGTGGAGGAGAGA+AGG | 0.557134 | 2_1:+1113341 | Msa0186410:CDS |
| AAGCAACTCCCAAGCAGTAA+GGG | 0.557785 | 2_1:+1109312 | Msa0186410:CDS |
| GAAAGCTGAGCCGCGATGTG+TGG | 0.564328 | 2_1:+1108138 | Msa0186410:CDS |
| AACATGGCTAAAATATTAGC+CGG | 0.565993 | 2_1:+1114064 | Msa0186410:CDS |
| CTACAGGCTTGCAAACAGGT+TGG | 0.566092 | 2_1:+1110319 | Msa0186410:CDS |
| AGAGATTTACCGTGATGTGT+TGG | 0.566372 | 2_1:-1107859 | None:intergenic |
| CGTACTTGGAAACTTGCTGC+TGG | 0.566592 | 2_1:-1108201 | None:intergenic |
| GACGGAAGCGTTGATAAAAG+TGG | 0.567941 | 2_1:-1107727 | None:intergenic |
| TTGTTGATTGCAACTAGTGG+AGG | 0.569731 | 2_1:+1108341 | Msa0186410:CDS |
| GCGTCTCCGGTGTATATGAT+CGG | 0.570166 | 2_1:-1107837 | None:intergenic |
| AAGCAGCTACAAAACCGAAT+CGG | 0.572163 | 2_1:+1108315 | Msa0186410:CDS |
| TTATTGATGTGATGTGTGAG+TGG | 0.574377 | 2_1:-1107473 | None:intergenic |
| TATTTGTTGATTGCAACTAG+TGG | 0.574632 | 2_1:+1108338 | Msa0186410:CDS |
| AGGTTAGACCTGGTAGAGGA+GGG | 0.579430 | 2_1:+1114336 | Msa0186410:CDS |
| GCTTGAATCAACAAAGAACT+GGG | 0.581267 | 2_1:+1108363 | Msa0186410:CDS |
| ATCACAAACAATAAAATCAA+GGG | 0.582973 | 2_1:-1114008 | None:intergenic |
| AAGGAGGTTAGACCTGGTAG+AGG | 0.583281 | 2_1:+1114332 | Msa0186410:CDS |
| TGATCGGAATCGATAGGAGA+AGG | 0.584171 | 2_1:-1107821 | None:intergenic |
| CCCTTGTGAGAATGGGAGAG+AGG | 0.584821 | 2_1:-1107663 | None:intergenic |
| GTTCACGTGGGCACGTGCAA+GGG | 0.595002 | 2_1:+1107296 | Msa0186410:five_prime_UTR |
| CTAACCGGAACACGGAACTC+AGG | 0.596840 | 2_1:-1108012 | None:intergenic |
| GAGCCAAAGGAGGTTAGACC+TGG | 0.602043 | 2_1:+1114326 | Msa0186410:CDS |
| CATTAGACCGACTTCTTCTG+GGG | 0.602188 | 2_1:-1113807 | None:intergenic |
| AACTCCCAAGCAGTAAGGGT+CGG | 0.602499 | 2_1:+1109316 | Msa0186410:CDS |
| AGGAACTGGGCGCAATAAGG+AGG | 0.607123 | 2_1:+1113370 | Msa0186410:CDS |
| TTGTTCCAAAATTGGATCAG+CGG | 0.607564 | 2_1:+1109087 | Msa0186410:CDS |
| TTAGGGAATAATGCTTTGAG+AGG | 0.608619 | 2_1:-1113911 | None:intergenic |
| TATTGATGTGATGTGTGAGT+GGG | 0.608819 | 2_1:-1107472 | None:intergenic |
| GAACAGAAGTAACTCGACTT+GGG | 0.609695 | 2_1:+1114256 | Msa0186410:CDS |
| TGCATTTCCTTGGAACACGC+AGG | 0.613917 | 2_1:-1109359 | None:intergenic |
| CTTTCCAGAAAGGCTTCATG+GGG | 0.618495 | 2_1:+1114303 | Msa0186410:CDS |
| TTTCTGGAAAGTACGAACAC+TGG | 0.620341 | 2_1:-1114291 | None:intergenic |
| TTCTCGAACTCCACACATCG+CGG | 0.620615 | 2_1:-1108148 | None:intergenic |
| CCGTTAACCCCAGAAGAAGT+CGG | 0.623838 | 2_1:+1113800 | Msa0186410:CDS |
| TCTGGATGTGACTATGGTGG+AGG | 0.624683 | 2_1:+1113333 | Msa0186410:CDS |
| TGTATATGATCGGAATCGAT+AGG | 0.624984 | 2_1:-1107827 | None:intergenic |
| TGTGAATGATGAACGTTGCT+GGG | 0.625104 | 2_1:-1107403 | None:intergenic |
| GAGAAGGAACATAAGGAACT+GGG | 0.625349 | 2_1:+1113357 | Msa0186410:CDS |
| TTGTGAGAATGGGAGAGAGG+TGG | 0.625529 | 2_1:-1107660 | None:intergenic |
| GATCGGTAAATCTTAGAGCA+TGG | 0.625626 | 2_1:-1110379 | None:intergenic |
| CCGGAGACGCCAACACATCA+CGG | 0.626575 | 2_1:+1107850 | Msa0186410:CDS |
| CTAAAATATTAGCCGGACGA+AGG | 0.633857 | 2_1:+1114071 | Msa0186410:CDS |
| ACAAAACTGTATGGCAACGA+AGG | 0.638593 | 2_1:+1107350 | Msa0186410:five_prime_UTR |
| AAACTGTATGGCAACGAAGG+CGG | 0.648166 | 2_1:+1107353 | Msa0186410:five_prime_UTR |
| AGATATCACGATAGTTCACG+TGG | 0.648879 | 2_1:+1107283 | Msa0186410:five_prime_UTR |
| ATATAGAGGAGATGAAACAT+TGG | 0.650301 | 2_1:+1113886 | Msa0186410:intron |
| GTGTTTGTCACCAATAACAA+TGG | 0.650929 | 2_1:+1114040 | Msa0186410:CDS |
| GGAAGCGTTGATAAAAGTGG+TGG | 0.655269 | 2_1:-1107724 | None:intergenic |
| AAATCATCGGAATCATAAGA+CGG | 0.658940 | 2_1:-1107745 | None:intergenic |
| CCTCTCTCCCATTCTCACAA+GGG | 0.668006 | 2_1:+1107663 | Msa0186410:five_prime_UTR |
| AACAGCTACAACTGAAGACG+AGG | 0.674966 | 2_1:+1115318 | Msa0186410:CDS |
| CATCAATAATCACTTCCCGA+AGG | 0.675416 | 2_1:+1107487 | Msa0186410:five_prime_UTR |
| GTCTAATGCTAAGAGCGTTG+GGG | 0.684569 | 2_1:+1113822 | Msa0186410:CDS |
| GCAATCCTGATAGGGCCAGG+AGG | 0.699932 | 2_1:+1113765 | Msa0186410:CDS |
| TCGATTCCGATCATATACAC+CGG | 0.716936 | 2_1:+1107831 | Msa0186410:CDS |
| AGAAACCATTGCTACCAAGG+AGG | 0.733733 | 2_1:+1113946 | Msa0186410:CDS |
| CTTGAATCAACAAAGAACTG+GGG | 0.754417 | 2_1:+1108364 | Msa0186410:CDS |
| TTTCCAGAAAGGCTTCATGG+GGG | 0.754484 | 2_1:+1114304 | Msa0186410:CDS |
| GATATCACGATAGTTCACGT+GGG | 0.767951 | 2_1:+1107284 | Msa0186410:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGATTATTTAATTACTATA+CGG | - | chr2_1:1108619-1108638 | None:intergenic | 10.0% |
| !! | AAGATATATATAATACTATT+AGG | + | chr2_1:1109553-1109572 | Msa0186410:intron | 10.0% |
| !! | AAACAATTTAAAAACATAAA+AGG | - | chr2_1:1112676-1112695 | None:intergenic | 10.0% |
| !!! | TATTGTTTTTCTTTAACAAA+CGG | - | chr2_1:1107258-1107277 | None:intergenic | 15.0% |
| !! | GTATAGTAATTAAATAATCA+TGG | + | chr2_1:1108618-1108637 | Msa0186410:intron | 15.0% |
| !! | ATTAAACATAAAAGATTTAC+TGG | - | chr2_1:1108894-1108913 | None:intergenic | 15.0% |
| !!! | TATAGTAAATGTATTTTAGA+TGG | + | chr2_1:1109633-1109652 | Msa0186410:intron | 15.0% |
| !!! | ATTTTTATTATGCAAATCAT+GGG | - | chr2_1:1109928-1109947 | None:intergenic | 15.0% |
| !!! | AATTTTTATTATGCAAATCA+TGG | - | chr2_1:1109929-1109948 | None:intergenic | 15.0% |
| !! | TTGAAAATTTAATGATCATA+GGG | - | chr2_1:1109993-1110012 | None:intergenic | 15.0% |
| !! | TTTGAAAATTTAATGATCAT+AGG | - | chr2_1:1109994-1110013 | None:intergenic | 15.0% |
| !! | TGTTTATTAAAAGCAAAAAA+AGG | - | chr2_1:1110167-1110186 | None:intergenic | 15.0% |
| !! | AAATAAAATGAATATCTTAG+TGG | - | chr2_1:1110726-1110745 | None:intergenic | 15.0% |
| !! | AAAAATAAAAATCAGCATAA+TGG | - | chr2_1:1110866-1110885 | None:intergenic | 15.0% |
| !!! | TATGCTGATTTTTATTTTTT+TGG | + | chr2_1:1110867-1110886 | Msa0186410:intron | 15.0% |
| !!! | TTTATTTTTTTGGTTTAGAT+AGG | + | chr2_1:1110877-1110896 | Msa0186410:intron | 15.0% |
| !!! | TTATTTTTTTGGTTTAGATA+GGG | + | chr2_1:1110878-1110897 | Msa0186410:intron | 15.0% |
| !! | AAGAACAAATTTATAGTATT+TGG | - | chr2_1:1111056-1111075 | None:intergenic | 15.0% |
| !! | TTATAAATATAGCATACATT+TGG | - | chr2_1:1111548-1111567 | None:intergenic | 15.0% |
| !!! | AGATTTTTTAGAAATTTACA+AGG | - | chr2_1:1112184-1112203 | None:intergenic | 15.0% |
| !!! | TGTAAATTTCTAAAAAATCT+CGG | + | chr2_1:1112184-1112203 | Msa0186410:intron | 15.0% |
| !!! | TAATTTGAAACAAAGAAAAA+TGG | + | chr2_1:1113058-1113077 | Msa0186410:intron | 15.0% |
| !! | ATCTCTTAATAAATTATTGT+TGG | - | chr2_1:1113441-1113460 | None:intergenic | 15.0% |
| !! | ATTTAATGAAAAATGTAGTT+AGG | - | chr2_1:1113572-1113591 | None:intergenic | 15.0% |
| !!! | ATTGTTTTTCTTTAACAAAC+GGG | - | chr2_1:1107257-1107276 | None:intergenic | 20.0% |
| !! | ATAGAACAGAAAAAGAAAAT+AGG | - | chr2_1:1107434-1107453 | None:intergenic | 20.0% |
| !!! | AACATACATTTTTACCAAAT+TGG | + | chr2_1:1107626-1107645 | Msa0186410:five_prime_UTR | 20.0% |
| !!! | AGATTTCATGATTTTGTTAT+TGG | + | chr2_1:1108067-1108086 | Msa0186410:intron | 20.0% |
| !! | AATTTGACAACCTTAATATA+AGG | - | chr2_1:1108504-1108523 | None:intergenic | 20.0% |
| !! | TTATTGTTTCCAAACTATAT+GGG | + | chr2_1:1108967-1108986 | Msa0186410:intron | 20.0% |
| !!! | GATCATTTTGTTTTTACAAA+TGG | + | chr2_1:1109015-1109034 | Msa0186410:intron | 20.0% |
| !!! | TTATGTTTTCCTTTTTAAGT+AGG | + | chr2_1:1109489-1109508 | Msa0186410:intron | 20.0% |
| !!! | TTTTAACTGCTTTTCATTTA+AGG | + | chr2_1:1109579-1109598 | Msa0186410:intron | 20.0% |
| !!! | ATCCTATGGTTTTAAATTTT+TGG | - | chr2_1:1109800-1109819 | None:intergenic | 20.0% |
| !!! | CAGAAATGGTTTTAAATTTT+TGG | - | chr2_1:1109838-1109857 | None:intergenic | 20.0% |
| !!! | TTTTTATTATGCAAATCATG+GGG | - | chr2_1:1109927-1109946 | None:intergenic | 20.0% |
| !! | GTCATATTTAATGATCAAAA+CGG | - | chr2_1:1109956-1109975 | None:intergenic | 20.0% |
| !!! | ACAGTTTTTTAGGAAATTTT+TGG | + | chr2_1:1110110-1110129 | Msa0186410:intron | 20.0% |
| !!! | ATATTGTTGCTTCATTTATA+TGG | + | chr2_1:1110270-1110289 | Msa0186410:intron | 20.0% |
| !!! | ATACTACATTATAGTTTTAG+TGG | - | chr2_1:1110579-1110598 | None:intergenic | 20.0% |
| !!! | TCATTTTATTTGCACAAATA+TGG | + | chr2_1:1110735-1110754 | Msa0186410:intron | 20.0% |
| !! | ACAAGTAATATAACTCAAAT+TGG | + | chr2_1:1110811-1110830 | Msa0186410:intron | 20.0% |
| !! | AAGAACAAGTTTACAATATA+TGG | + | chr2_1:1111164-1111183 | Msa0186410:intron | 20.0% |
| !! | ATGTATGCTATATTTATAAC+TGG | + | chr2_1:1111549-1111568 | Msa0186410:intron | 20.0% |
| !! | TTTGTTCTAGCATATAAAAT+AGG | + | chr2_1:1111834-1111853 | Msa0186410:intron | 20.0% |
| !! | CACTTTCAATTCATTTAATA+GGG | + | chr2_1:1111915-1111934 | Msa0186410:intron | 20.0% |
| !! | CAAAAGTTGTATAATTGAAA+AGG | - | chr2_1:1112369-1112388 | None:intergenic | 20.0% |
| !! | TTAAAAACATAAAAGGTGAT+GGG | - | chr2_1:1112669-1112688 | None:intergenic | 20.0% |
| !! | TTTAAAAACATAAAAGGTGA+TGG | - | chr2_1:1112670-1112689 | None:intergenic | 20.0% |
| !! | TAAAACACCCTTATTAATTA+TGG | + | chr2_1:1112808-1112827 | Msa0186410:intron | 20.0% |
| !! | CTACTAACCATAATTAATAA+GGG | - | chr2_1:1112818-1112837 | None:intergenic | 20.0% |
| !! | TCTACTAACCATAATTAATA+AGG | - | chr2_1:1112819-1112838 | None:intergenic | 20.0% |
| !! | AAGACTAAAACCTTAAAATT+AGG | - | chr2_1:1113095-1113114 | None:intergenic | 20.0% |
| !!! | TAATTTTAAGGTTTTAGTCT+TGG | + | chr2_1:1113094-1113113 | Msa0186410:intron | 20.0% |
| !!! | AATGGCTTTTAACATTTTAA+TGG | + | chr2_1:1113602-1113621 | Msa0186410:intron | 20.0% |
| !!! | TTTCTTTTGAATGGAAATTA+GGG | - | chr2_1:1113931-1113950 | None:intergenic | 20.0% |
| !! | ATCACAAACAATAAAATCAA+GGG | - | chr2_1:1114011-1114030 | None:intergenic | 20.0% |
| !! | TTGTAATTAAATCTGGAAAA+AGG | + | chr2_1:1114893-1114912 | Msa0186410:intron | 20.0% |
| ! | GAGAGAAAACAAAACAAAAA+TGG | + | chr2_1:1107685-1107704 | Msa0186410:exon | 25.0% |
| ! | AGAAAACAAAACAAAAATGG+CGG | + | chr2_1:1107688-1107707 | Msa0186410:exon | 25.0% |
| !!! | TTTTGTTTTGATCAGAAAGA+TGG | + | chr2_1:1108113-1108132 | Msa0186410:intron | 25.0% |
| ! | CTATTTCATTAATCAAAGCA+TGG | + | chr2_1:1108400-1108419 | Msa0186410:intron | 25.0% |
| ! | ATCAGATTTGCCTTATATTA+AGG | + | chr2_1:1108491-1108510 | Msa0186410:intron | 25.0% |
| !!! | AATAGTTTTGCATCAAAATC+TGG | + | chr2_1:1108858-1108877 | Msa0186410:intron | 25.0% |
| ! | CTTATTGTTTCCAAACTATA+TGG | + | chr2_1:1108966-1108985 | Msa0186410:intron | 25.0% |
| !! | ATTTGCATAATGAGTTTTTC+AGG | + | chr2_1:1109668-1109687 | Msa0186410:intron | 25.0% |
| !! | TGCCAAAAATTTAAAACCAT+AGG | + | chr2_1:1109795-1109814 | Msa0186410:intron | 25.0% |
| ! | AAATAGAAAAGGTTCAGAAA+TGG | - | chr2_1:1109852-1109871 | None:intergenic | 25.0% |
| !! | TTTTATTATGCAAATCATGG+GGG | - | chr2_1:1109926-1109945 | None:intergenic | 25.0% |
| !!! | ACTTAAAGTGGGTTAAATTT+CGG | - | chr2_1:1110024-1110043 | None:intergenic | 25.0% |
| ! | AAGTCCTAGTTTCTATAAAA+TGG | + | chr2_1:1110040-1110059 | Msa0186410:intron | 25.0% |
| ! | CTGATTTCAGTTATCAAAAT+AGG | + | chr2_1:1110063-1110082 | Msa0186410:intron | 25.0% |
| !!! | TTTTGACCCATTTTTAGTAT+TGG | - | chr2_1:1110404-1110423 | None:intergenic | 25.0% |
| ! | ACTAAAAATGGGTCAAAAAT+TGG | + | chr2_1:1110406-1110425 | Msa0186410:CDS | 25.0% |
| ! | ATCAATCAGATTCATCAATT+TGG | + | chr2_1:1110550-1110569 | Msa0186410:intron | 25.0% |
| !! | ACATGAGCAAATTTTTAACA+AGG | - | chr2_1:1110628-1110647 | None:intergenic | 25.0% |
| ! | TACAAATACTTGTCAAAACT+GGG | + | chr2_1:1110647-1110666 | Msa0186410:intron | 25.0% |
| ! | TATAACTCAAATTGGATAAG+TGG | + | chr2_1:1110819-1110838 | Msa0186410:intron | 25.0% |
| ! | TTCACTTAATATGATCATTC+TGG | - | chr2_1:1111114-1111133 | None:intergenic | 25.0% |
| ! | GTGAAACAGAATTGTAATAA+AGG | + | chr2_1:1111129-1111148 | Msa0186410:intron | 25.0% |
| ! | AACAGAATTGTAATAAAGGT+TGG | + | chr2_1:1111133-1111152 | Msa0186410:intron | 25.0% |
| ! | TGAAGTTTCAATAACTCAAT+TGG | + | chr2_1:1111202-1111221 | Msa0186410:intron | 25.0% |
| ! | TCTCTAACATAGATCTTATA+CGG | + | chr2_1:1111388-1111407 | Msa0186410:intron | 25.0% |
| ! | TAAATATAGCATACATTTGG+AGG | - | chr2_1:1111545-1111564 | None:intergenic | 25.0% |
| ! | GCACTTTCAATTCATTTAAT+AGG | + | chr2_1:1111914-1111933 | Msa0186410:intron | 25.0% |
| !!! | TAATTTTTGCTTTGAACAGA+AGG | + | chr2_1:1112130-1112149 | Msa0186410:intron | 25.0% |
| !!! | AATGTAAATTGGGTTTTAGA+TGG | + | chr2_1:1112409-1112428 | Msa0186410:intron | 25.0% |
| ! | TATCAATGGAAATTTGATCA+AGG | + | chr2_1:1112476-1112495 | Msa0186410:intron | 25.0% |
| ! | TCCTTTAGATATATCTTGAT+TGG | + | chr2_1:1112630-1112649 | Msa0186410:intron | 25.0% |
| ! | TCCAATCAAGATATATCTAA+AGG | - | chr2_1:1112634-1112653 | None:intergenic | 25.0% |
| !!! | TTAGTTTTACACGAGAATTA+AGG | + | chr2_1:1112740-1112759 | Msa0186410:intron | 25.0% |
| !!! | ATTAGTAGTGTTGATTTTCA+TGG | + | chr2_1:1112768-1112787 | Msa0186410:intron | 25.0% |
| ! | TGATTGAAATGCATGAAATA+AGG | + | chr2_1:1112847-1112866 | Msa0186410:intron | 25.0% |
| ! | GATTGAAATGCATGAAATAA+GGG | + | chr2_1:1112848-1112867 | Msa0186410:intron | 25.0% |
| !! | AATAAATAAGGGTATGATAG+TGG | + | chr2_1:1112994-1113013 | Msa0186410:intron | 25.0% |
| ! | AACAAAGAAAAATGGTAAAG+AGG | + | chr2_1:1113066-1113085 | Msa0186410:intron | 25.0% |
| !!! | TTGGTACTGTTGATTTTTTT+CGG | + | chr2_1:1113184-1113203 | Msa0186410:intron | 25.0% |
| ! | ATTACTTATGCAAAACCATA+TGG | + | chr2_1:1113513-1113532 | Msa0186410:intron | 25.0% |
| ! | TAACATAAATTGATGCCATA+TGG | - | chr2_1:1113531-1113550 | None:intergenic | 25.0% |
| ! | CATTAAATGAATATCAGCAA+TGG | + | chr2_1:1113584-1113603 | Msa0186410:intron | 25.0% |
| ! | TCAAATAATGCCTATTTACT+TGG | - | chr2_1:1113654-1113673 | None:intergenic | 25.0% |
| ! | TTCATATTTATGTTGCATCT+GGG | + | chr2_1:1113858-1113877 | Msa0186410:intron | 25.0% |
| !! | GTTTCTTTTGAATGGAAATT+AGG | - | chr2_1:1113932-1113951 | None:intergenic | 25.0% |
| ! | CATCACAAACAATAAAATCA+AGG | - | chr2_1:1114012-1114031 | None:intergenic | 25.0% |
| !!! | TGTTTATTTTCACTTTCTGT+TGG | + | chr2_1:1114114-1114133 | Msa0186410:intron | 25.0% |
| !! | TGGATCTAGAAAATTTTCAA+GGG | + | chr2_1:1114421-1114440 | Msa0186410:intron | 25.0% |
| !!! | ATCATTTGCTACAACTTTTT+TGG | - | chr2_1:1114456-1114475 | None:intergenic | 25.0% |
| !!! | ATATATGTGCTTTTTCTGTT+CGG | - | chr2_1:1114735-1114754 | None:intergenic | 25.0% |
| ! | TTTGGACTTGTAATTAAATC+TGG | + | chr2_1:1114886-1114905 | Msa0186410:intron | 25.0% |
| !! | AAATCTGTATATTTTCGTTG+AGG | + | chr2_1:1115002-1115021 | Msa0186410:intron | 25.0% |
| ! | TTCTATAAAGCTGATCAAAA+TGG | + | chr2_1:1115198-1115217 | Msa0186410:intron | 25.0% |
| !!! | ACAGTTTTGTTGTTTGGAAA+TGG | - | chr2_1:1107340-1107359 | None:intergenic | 30.0% |
| TTCCAAACAACAAAACTGTA+TGG | + | chr2_1:1107341-1107360 | Msa0186410:five_prime_UTR | 30.0% | |
| TTGAAATCTGTAATCTCCTT+CGG | - | chr2_1:1107506-1107525 | None:intergenic | 30.0% | |
| AAATCATCGGAATCATAAGA+CGG | - | chr2_1:1107748-1107767 | None:intergenic | 30.0% | |
| !! | AGGTTTTTCAATCACTTCAT+TGG | - | chr2_1:1107995-1108014 | None:intergenic | 30.0% |
| CTATTTGTGGATTCTGTTAT+TGG | + | chr2_1:1108228-1108247 | Msa0186410:intron | 30.0% | |
| ! | TATTTGTTGATTGCAACTAG+TGG | + | chr2_1:1108338-1108357 | Msa0186410:CDS | 30.0% |
| ATATAAGGCAAATCTGATTG+AGG | - | chr2_1:1108489-1108508 | None:intergenic | 30.0% | |
| AGAAAAGGGACTAAATTTGT+TGG | + | chr2_1:1108573-1108592 | Msa0186410:intron | 30.0% | |
| ! | AATAATCATGGAGCATTAGT+TGG | + | chr2_1:1108630-1108649 | Msa0186410:intron | 30.0% |
| TACTTTGGTTGTTCCAAAAT+TGG | + | chr2_1:1109079-1109098 | Msa0186410:CDS | 30.0% | |
| ! | ATTCTAGGTAATTTGCAGAA+AGG | + | chr2_1:1109123-1109142 | Msa0186410:intron | 30.0% |
| TTACTGCAAAAGGTAAAGTA+TGG | - | chr2_1:1109228-1109247 | None:intergenic | 30.0% | |
| GACATCATTTGACAAATATG+AGG | - | chr2_1:1109283-1109302 | None:intergenic | 30.0% | |
| !!! | TGTTTTCCTTTTTAAGTAGG+AGG | + | chr2_1:1109492-1109511 | Msa0186410:intron | 30.0% |
| !!! | GTTCGATTTTTTTTATCGCT+CGG | + | chr2_1:1109530-1109549 | Msa0186410:intron | 30.0% |
| !!! | GTTTTTCAGGTTTCTTCATT+AGG | + | chr2_1:1109681-1109700 | Msa0186410:intron | 30.0% |
| AAAAGATGAGAGATATCCTA+TGG | - | chr2_1:1109776-1109795 | None:intergenic | 30.0% | |
| TTGCCAAGTGATCTTATAAT+TGG | + | chr2_1:1109870-1109889 | Msa0186410:intron | 30.0% | |
| AGTCCAATTATAAGATCACT+TGG | - | chr2_1:1109876-1109895 | None:intergenic | 30.0% | |
| !! | CTTAAAGTGGGTTAAATTTC+GGG | - | chr2_1:1110023-1110042 | None:intergenic | 30.0% |
| TAGAAACTAGGACTTAAAGT+GGG | - | chr2_1:1110035-1110054 | None:intergenic | 30.0% | |
| ATAGAAACTAGGACTTAAAG+TGG | - | chr2_1:1110036-1110055 | None:intergenic | 30.0% | |
| !! | TCAGCCATTTTATAGAAACT+AGG | - | chr2_1:1110047-1110066 | None:intergenic | 30.0% |
| !!! | TGATACTGCAACAGTTTTTT+AGG | + | chr2_1:1110100-1110119 | Msa0186410:intron | 30.0% |
| TACCGATCCAATACTAAAAA+TGG | + | chr2_1:1110394-1110413 | Msa0186410:CDS | 30.0% | |
| ACCGATCCAATACTAAAAAT+GGG | + | chr2_1:1110395-1110414 | Msa0186410:CDS | 30.0% | |
| !!! | ACCCATTTTTAGTATTGGAT+CGG | - | chr2_1:1110399-1110418 | None:intergenic | 30.0% |
| TCTGATTGATAAGATTACCT+GGG | - | chr2_1:1110540-1110559 | None:intergenic | 30.0% | |
| ATCTGATTGATAAGATTACC+TGG | - | chr2_1:1110541-1110560 | None:intergenic | 30.0% | |
| GTACAAATACTTGTCAAAAC+TGG | + | chr2_1:1110646-1110665 | Msa0186410:intron | 30.0% | |
| CTTAACAAGCAAATGTAATG+AGG | - | chr2_1:1110699-1110718 | None:intergenic | 30.0% | |
| ! | ACATGGATGTTCATTTTCTT+GGG | + | chr2_1:1110761-1110780 | Msa0186410:intron | 30.0% |
| AAAAATCAGCATAATGGCAT+TGG | - | chr2_1:1110860-1110879 | None:intergenic | 30.0% | |
| ! | TCTCCTCCTTTTATCTAAAT+GGG | - | chr2_1:1110947-1110966 | None:intergenic | 30.0% |
| !! | TCAATAACTCAATTGGTTTG+AGG | + | chr2_1:1111209-1111228 | Msa0186410:intron | 30.0% |
| AAAAGATAGAGAAAAACTGC+AGG | - | chr2_1:1111416-1111435 | None:intergenic | 30.0% | |
| TTAGCGTGTTAAGATTAGAA+AGG | - | chr2_1:1111440-1111459 | None:intergenic | 30.0% | |
| TTCTAATCTTAACACGCTAA+TGG | + | chr2_1:1111440-1111459 | Msa0186410:intron | 30.0% | |
| AAACTAGTAATGCGCAATAA+AGG | + | chr2_1:1111599-1111618 | Msa0186410:intron | 30.0% | |
| TTCTTAACAAGAATCTTGAG+GGG | - | chr2_1:1111777-1111796 | None:intergenic | 30.0% | |
| GTTCTTAACAAGAATCTTGA+GGG | - | chr2_1:1111778-1111797 | None:intergenic | 30.0% | |
| AGTTCTTAACAAGAATCTTG+AGG | - | chr2_1:1111779-1111798 | None:intergenic | 30.0% | |
| ATATGCTAGAACAAAACATG+TGG | - | chr2_1:1111829-1111848 | None:intergenic | 30.0% | |
| AAGCTAACCAAGATGATATA+AGG | - | chr2_1:1112079-1112098 | None:intergenic | 30.0% | |
| CAGATATATTCAAGAGTTGT+TGG | - | chr2_1:1112317-1112336 | None:intergenic | 30.0% | |
| CAACAACTCTTGAATATATC+TGG | + | chr2_1:1112315-1112334 | Msa0186410:intron | 30.0% | |
| AATGGAAATTTGATCAAGGT+TGG | + | chr2_1:1112480-1112499 | Msa0186410:intron | 30.0% | |
| AGTAACCGTTCAATTAAGAT+CGG | - | chr2_1:1112577-1112596 | None:intergenic | 30.0% | |
| ! | AAAGAGGACACCTAATTTTA+AGG | + | chr2_1:1113082-1113101 | Msa0186410:intron | 30.0% |
| GTTCATATTTATGTTGCATC+TGG | + | chr2_1:1113857-1113876 | Msa0186410:intron | 30.0% | |
| TCATATTTATGTTGCATCTG+GGG | + | chr2_1:1113859-1113878 | Msa0186410:intron | 30.0% | |
| ATATAGAGGAGATGAAACAT+TGG | + | chr2_1:1113886-1113905 | Msa0186410:intron | 30.0% | |
| ! | TAGCAATGGTTTCTTTTGAA+TGG | - | chr2_1:1113940-1113959 | None:intergenic | 30.0% |
| CGAGAAGAAAATGAAGAAAA+TGG | - | chr2_1:1113980-1113999 | None:intergenic | 30.0% | |
| AACATGGCTAAAATATTAGC+CGG | + | chr2_1:1114064-1114083 | Msa0186410:CDS | 30.0% | |
| CTTTCTGTACACTTTCTTAT+AGG | + | chr2_1:1114171-1114190 | Msa0186410:intron | 30.0% | |
| CTTTCTTATAGGAGATACTT+TGG | + | chr2_1:1114182-1114201 | Msa0186410:intron | 30.0% | |
| !!! | CTGTAGAGTTTTTTAGCATT+TGG | - | chr2_1:1114227-1114246 | None:intergenic | 30.0% |
| ! | TCCAGAATTTTTGTCCAATT+TGG | - | chr2_1:1114405-1114424 | None:intergenic | 30.0% |
| ! | CTGGATCTAGAAAATTTTCA+AGG | + | chr2_1:1114420-1114439 | Msa0186410:intron | 30.0% |
| AAAAGTTGTAGCAAATGATG+AGG | + | chr2_1:1114457-1114476 | Msa0186410:intron | 30.0% | |
| ATCAGAATGATCTTACAGAT+AGG | + | chr2_1:1114528-1114547 | Msa0186410:intron | 30.0% | |
| TCAGAATGATCTTACAGATA+GGG | + | chr2_1:1114529-1114548 | Msa0186410:intron | 30.0% | |
| !!! | TATATGTGCTTTTTCTGTTC+GGG | - | chr2_1:1114734-1114753 | None:intergenic | 30.0% |
| !! | GTGCATTTTTAAGAGCATAA+TGG | + | chr2_1:1114834-1114853 | Msa0186410:intron | 30.0% |
| CAAAATTTAGCAACAAACCA+AGG | - | chr2_1:1114860-1114879 | None:intergenic | 30.0% | |
| !!! | TGGTTTGTTGCTAAATTTTG+TGG | + | chr2_1:1114860-1114879 | Msa0186410:intron | 30.0% |
| !!! | GGTTTGTTGCTAAATTTTGT+GGG | + | chr2_1:1114861-1114880 | Msa0186410:intron | 30.0% |
| !!! | TGCCATACAGTTTTGTTGTT+TGG | - | chr2_1:1107346-1107365 | None:intergenic | 35.0% |
| TATTGATGTGATGTGTGAGT+GGG | - | chr2_1:1107475-1107494 | None:intergenic | 35.0% | |
| TTATTGATGTGATGTGTGAG+TGG | - | chr2_1:1107476-1107495 | None:intergenic | 35.0% | |
| TGAAATCTGTAATCTCCTTC+GGG | - | chr2_1:1107505-1107524 | None:intergenic | 35.0% | |
| AACGAAGAGAAAAAGTAGAG+CGG | - | chr2_1:1107783-1107802 | None:intergenic | 35.0% | |
| TGTATATGATCGGAATCGAT+AGG | - | chr2_1:1107830-1107849 | None:intergenic | 35.0% | |
| !! | AATCCAGAAAAAGCACTAAC+CGG | - | chr2_1:1108030-1108049 | None:intergenic | 35.0% |
| !!! | TGTTTTGATCAGAAAGATGG+AGG | + | chr2_1:1108116-1108135 | Msa0186410:intron | 35.0% |
| AGAAATTCGGAACACTTCTA+CGG | + | chr2_1:1108167-1108186 | Msa0186410:CDS | 35.0% | |
| CCACAAATAGATTACGTACT+TGG | - | chr2_1:1108218-1108237 | None:intergenic | 35.0% | |
| CCAAGTACGTAATCTATTTG+TGG | + | chr2_1:1108215-1108234 | Msa0186410:intron | 35.0% | |
| TGGATTCTGTTATTGGATCT+TGG | + | chr2_1:1108235-1108254 | Msa0186410:intron | 35.0% | |
| ! | GCAATCAACAAATACCGATT+CGG | - | chr2_1:1108332-1108351 | None:intergenic | 35.0% |
| GCTTGAATCAACAAAGAACT+GGG | + | chr2_1:1108363-1108382 | Msa0186410:CDS | 35.0% | |
| CTTGAATCAACAAAGAACTG+GGG | + | chr2_1:1108364-1108383 | Msa0186410:CDS | 35.0% | |
| CAAAGCATGGATTTCATATC+TGG | + | chr2_1:1108413-1108432 | Msa0186410:intron | 35.0% | |
| ATGTGACATTCGATGAGAAA+AGG | + | chr2_1:1108558-1108577 | Msa0186410:intron | 35.0% | |
| TGTGACATTCGATGAGAAAA+GGG | + | chr2_1:1108559-1108578 | Msa0186410:intron | 35.0% | |
| GGTAGGATCTGAAAACATAA+GGG | - | chr2_1:1108801-1108820 | None:intergenic | 35.0% | |
| AATTAACAGAAAAGCCAAGC+GGG | - | chr2_1:1108822-1108841 | None:intergenic | 35.0% | |
| CAATTAACAGAAAAGCCAAG+CGG | - | chr2_1:1108823-1108842 | None:intergenic | 35.0% | |
| !! | GCGAATTTTGAATGCTACTT+TGG | + | chr2_1:1109064-1109083 | Msa0186410:CDS | 35.0% |
| TTGTTCCAAAATTGGATCAG+CGG | + | chr2_1:1109087-1109106 | Msa0186410:CDS | 35.0% | |
| ! | CTCTGAAAAGTTACTGCAAA+AGG | - | chr2_1:1109238-1109257 | None:intergenic | 35.0% |
| CAGAGATCTTTGATGTTGAT+TGG | + | chr2_1:1109253-1109272 | Msa0186410:CDS | 35.0% | |
| AAAATCGAACTGAGAAACGA+AGG | - | chr2_1:1109520-1109539 | None:intergenic | 35.0% | |
| TTGTCCAAATCTCTATGTGA+TGG | + | chr2_1:1109606-1109625 | Msa0186410:intron | 35.0% | |
| TCATTAGGCTACTGATCTAT+TGG | + | chr2_1:1109696-1109715 | Msa0186410:intron | 35.0% | |
| GATCACTTGGCAAATAGAAA+AGG | - | chr2_1:1109863-1109882 | None:intergenic | 35.0% | |
| CAAATCATGGGGGAAAAATA+TGG | - | chr2_1:1109916-1109935 | None:intergenic | 35.0% | |
| AAAAGCAAAAAAAGGCCAGT+TGG | - | chr2_1:1110159-1110178 | None:intergenic | 35.0% | |
| ! | TGTTGCTTCATTTATATGGC+AGG | + | chr2_1:1110274-1110293 | Msa0186410:intron | 35.0% |
| AACTCAACAAGTTTGACTAC+AGG | + | chr2_1:1110303-1110322 | Msa0186410:CDS | 35.0% | |
| ATTACATTGCACTGCATTTG+AGG | + | chr2_1:1110456-1110475 | Msa0186410:CDS | 35.0% | |
| ACAGACAAGCGTATAAAAGA+GGG | - | chr2_1:1110500-1110519 | None:intergenic | 35.0% | |
| AGGACATTGATCGACATATA+TGG | - | chr2_1:1110608-1110627 | None:intergenic | 35.0% | |
| TTCAGTTCTTACTTTCATGC+TGG | + | chr2_1:1110670-1110689 | Msa0186410:intron | 35.0% | |
| TTGCACAAATATGGAACACA+TGG | + | chr2_1:1110744-1110763 | Msa0186410:intron | 35.0% | |
| ! | CACATGGATGTTCATTTTCT+TGG | + | chr2_1:1110760-1110779 | Msa0186410:intron | 35.0% |
| ! | CATGGATGTTCATTTTCTTG+GGG | + | chr2_1:1110762-1110781 | Msa0186410:intron | 35.0% |
| ! | ATGGATGTTCATTTTCTTGG+GGG | + | chr2_1:1110763-1110782 | Msa0186410:intron | 35.0% |
| GGTTTAGATAGGGAACTATA+AGG | + | chr2_1:1110888-1110907 | Msa0186410:intron | 35.0% | |
| GTTGTGCCCATTTAGATAAA+AGG | + | chr2_1:1110938-1110957 | Msa0186410:intron | 35.0% | |
| ! | CTCTCCTCCTTTTATCTAAA+TGG | - | chr2_1:1110948-1110967 | None:intergenic | 35.0% |
| ! | ATTTTCAGCCTTTACTACAG+TGG | + | chr2_1:1111080-1111099 | Msa0186410:intron | 35.0% |
| TTACATTGCCACTGTAGTAA+AGG | - | chr2_1:1111091-1111110 | None:intergenic | 35.0% | |
| !! | AACTCAATTGGTTTGAGGTA+AGG | + | chr2_1:1111214-1111233 | Msa0186410:intron | 35.0% |
| !! | ACTCAATTGGTTTGAGGTAA+GGG | + | chr2_1:1111215-1111234 | Msa0186410:intron | 35.0% |
| GGAGGAATAAGAAAGGAAAT+TGG | - | chr2_1:1111519-1111538 | None:intergenic | 35.0% | |
| ATAGCATACATTTGGAGGAA+TGG | - | chr2_1:1111540-1111559 | None:intergenic | 35.0% | |
| TCACCTACTATCACATTTGA+GGG | - | chr2_1:1111651-1111670 | None:intergenic | 35.0% | |
| ACTCGATTTATACTACTCCT+TGG | - | chr2_1:1111675-1111694 | None:intergenic | 35.0% | |
| ATATCTTATGTGACAGTCTC+GGG | - | chr2_1:1111879-1111898 | None:intergenic | 35.0% | |
| CATATCTTATGTGACAGTCT+CGG | - | chr2_1:1111880-1111899 | None:intergenic | 35.0% | |
| AGACTGTCACATAAGATATG+AGG | + | chr2_1:1111880-1111899 | Msa0186410:intron | 35.0% | |
| GACTGTCACATAAGATATGA+GGG | + | chr2_1:1111881-1111900 | Msa0186410:intron | 35.0% | |
| AAGATATGAGGGATGTCAAA+AGG | + | chr2_1:1111892-1111911 | Msa0186410:intron | 35.0% | |
| ATGATATAAGGTCCACTTCA+GGG | - | chr2_1:1112067-1112086 | None:intergenic | 35.0% | |
| AAGTGGACCTTATATCATCT+TGG | + | chr2_1:1112069-1112088 | Msa0186410:intron | 35.0% | |
| GTTTCATCTACAATGATCAG+TGG | - | chr2_1:1112261-1112280 | None:intergenic | 35.0% | |
| !!! | TCTGGCTTTTTTGTCTGATT+TGG | + | chr2_1:1112333-1112352 | Msa0186410:intron | 35.0% |
| !! | CTTTTGTTGTCAAATCCCAA+CGG | + | chr2_1:1112383-1112402 | Msa0186410:intron | 35.0% |
| !! | TTTTGTTGTCAAATCCCAAC+GGG | + | chr2_1:1112384-1112403 | Msa0186410:intron | 35.0% |
| !!! | ATTGGGTTTTAGATGGATTG+AGG | + | chr2_1:1112416-1112435 | Msa0186410:intron | 35.0% |
| !! | AGATGGATTGAGGATGAATT+TGG | + | chr2_1:1112426-1112445 | Msa0186410:intron | 35.0% |
| ACTGTCCGATCTTAATTGAA+CGG | + | chr2_1:1112569-1112588 | Msa0186410:intron | 35.0% | |
| CTCTTACTCTGTCTCAAATT+AGG | + | chr2_1:1112712-1112731 | Msa0186410:intron | 35.0% | |
| ATTCTCTCTGTTGCCAATTT+CGG | + | chr2_1:1112943-1112962 | Msa0186410:intron | 35.0% | |
| !!! | TTTTTTCGGACAGCAAACAA+TGG | + | chr2_1:1113198-1113217 | Msa0186410:intron | 35.0% |
| ACACTTGTATAGATCCTATC+AGG | + | chr2_1:1113226-1113245 | Msa0186410:intron | 35.0% | |
| CACTTGTATAGATCCTATCA+GGG | + | chr2_1:1113227-1113246 | Msa0186410:intron | 35.0% | |
| TATCTATTACTCTCCCTGAT+AGG | - | chr2_1:1113243-1113262 | None:intergenic | 35.0% | |
| ! | ACAGTTTTCTCATGCAAACA+TGG | - | chr2_1:1113696-1113715 | None:intergenic | 35.0% |
| ! | TTAGGGAATAATGCTTTGAG+AGG | - | chr2_1:1113914-1113933 | None:intergenic | 35.0% |
| AAAAGAAACCATTGCTACCA+AGG | + | chr2_1:1113943-1113962 | Msa0186410:CDS | 35.0% | |
| ! | TTCTTCATTTTCTTCTCGCA+TGG | + | chr2_1:1113982-1114001 | Msa0186410:CDS | 35.0% |
| GTGTTTGTCACCAATAACAA+TGG | + | chr2_1:1114040-1114059 | Msa0186410:CDS | 35.0% | |
| CACCAATAACAATGGTAACA+TGG | + | chr2_1:1114048-1114067 | Msa0186410:CDS | 35.0% | |
| AGCCATGTTACCATTGTTAT+TGG | - | chr2_1:1114053-1114072 | None:intergenic | 35.0% | |
| TAAGTGTAGATATCAGTGAC+GGG | - | chr2_1:1114143-1114162 | None:intergenic | 35.0% | |
| GTAAGTGTAGATATCAGTGA+CGG | - | chr2_1:1114144-1114163 | None:intergenic | 35.0% | |
| TTAGCATTTGGACGAATAGT+TGG | - | chr2_1:1114215-1114234 | None:intergenic | 35.0% | |
| GCCAAATTGGACAAAAATTC+TGG | + | chr2_1:1114401-1114420 | Msa0186410:intron | 35.0% | |
| CTATGAATCTCTGAACTTTG+AGG | + | chr2_1:1114577-1114596 | Msa0186410:intron | 35.0% | |
| GATATAATTTCCTCCAACTC+TGG | - | chr2_1:1114605-1114624 | None:intergenic | 35.0% | |
| GCACATATATTTCTCAACAC+TGG | + | chr2_1:1114745-1114764 | Msa0186410:intron | 35.0% | |
| !! | TTTTAAGAGCATAATGGCCT+TGG | + | chr2_1:1114840-1114859 | Msa0186410:intron | 35.0% |
| ! | TGCTAAATTTTGTGGGTGTT+TGG | + | chr2_1:1114868-1114887 | Msa0186410:intron | 35.0% |
| AAGTTAGCAATGAGTGGAAT+GGG | + | chr2_1:1114923-1114942 | Msa0186410:intron | 35.0% | |
| ACATCTAGCTGCATACAAAA+TGG | + | chr2_1:1114960-1114979 | Msa0186410:intron | 35.0% | |
| ! | CATACAAAATGGAGTTTGCT+AGG | + | chr2_1:1114971-1114990 | Msa0186410:intron | 35.0% |
| ACTACTGCTACATTAACTTC+GGG | - | chr2_1:1115127-1115146 | None:intergenic | 35.0% | |
| CACTACTGCTACATTAACTT+CGG | - | chr2_1:1115128-1115147 | None:intergenic | 35.0% | |
| AAAAGACTAACTACACCTAC+CGG | - | chr2_1:1115161-1115180 | None:intergenic | 35.0% | |
| TCACAAATTGAATCAGTGAC+TGG | + | chr2_1:1115239-1115258 | Msa0186410:intron | 35.0% | |
| TTTCGGTTCATCGAAATTGG+AGG | - | chr2_1:1107227-1107246 | None:intergenic | 40.0% | |
| AGATATCACGATAGTTCACG+TGG | + | chr2_1:1107283-1107302 | Msa0186410:five_prime_UTR | 40.0% | |
| GATATCACGATAGTTCACGT+GGG | + | chr2_1:1107284-1107303 | Msa0186410:five_prime_UTR | 40.0% | |
| ACAAAACTGTATGGCAACGA+AGG | + | chr2_1:1107350-1107369 | Msa0186410:five_prime_UTR | 40.0% | |
| TGTGAATGATGAACGTTGCT+GGG | - | chr2_1:1107406-1107425 | None:intergenic | 40.0% | |
| CATCAATAATCACTTCCCGA+AGG | + | chr2_1:1107487-1107506 | Msa0186410:five_prime_UTR | 40.0% | |
| TTTCTCTCCCTTGTGAGAAT+GGG | - | chr2_1:1107673-1107692 | None:intergenic | 40.0% | |
| ! | TTTTCTCTCCCTTGTGAGAA+TGG | - | chr2_1:1107674-1107693 | None:intergenic | 40.0% |
| AAACAAAAATGGCGGTTCAG+CGG | + | chr2_1:1107696-1107715 | Msa0186410:exon | 40.0% | |
| TCGATTCCGATCATATACAC+CGG | + | chr2_1:1107831-1107850 | Msa0186410:CDS | 40.0% | |
| AGAGATTTACCGTGATGTGT+TGG | - | chr2_1:1107862-1107881 | None:intergenic | 40.0% | |
| !! | AAAAAGCACTAACCGGAACA+CGG | - | chr2_1:1108023-1108042 | None:intergenic | 40.0% |
| TGTGTGGAGTTCGAGAAATT+CGG | + | chr2_1:1108154-1108173 | Msa0186410:CDS | 40.0% | |
| AAGCAGCTACAAAACCGAAT+CGG | + | chr2_1:1108315-1108334 | Msa0186410:CDS | 40.0% | |
| ! | TTGTTGATTGCAACTAGTGG+AGG | + | chr2_1:1108341-1108360 | Msa0186410:CDS | 40.0% |
| GGCTTGAATCAACAAAGAAC+TGG | + | chr2_1:1108362-1108381 | Msa0186410:CDS | 40.0% | |
| GGGTAGGATCTGAAAACATA+AGG | - | chr2_1:1108802-1108821 | None:intergenic | 40.0% | |
| AGCTGAGTACCCATATAGTT+TGG | - | chr2_1:1108979-1108998 | None:intergenic | 40.0% | |
| ! | TAAGACCGCTGATCCAATTT+TGG | - | chr2_1:1109095-1109114 | None:intergenic | 40.0% |
| GGTCTTACTGGAAAGATTCT+AGG | + | chr2_1:1109108-1109127 | Msa0186410:CDS | 40.0% | |
| CATCTTTCACTGCATTTCCT+TGG | - | chr2_1:1109372-1109391 | None:intergenic | 40.0% | |
| ! | AAGGCACCTCCTACTTAAAA+AGG | - | chr2_1:1109501-1109520 | None:intergenic | 40.0% |
| GCATCCATCACATAGAGATT+TGG | - | chr2_1:1109613-1109632 | None:intergenic | 40.0% | |
| !! | TGAATTTTAACCCCGATGTG+TGG | + | chr2_1:1109727-1109746 | Msa0186410:intron | 40.0% |
| CTTGACTGAGAAGTTACTTC+AGG | - | chr2_1:1109755-1109774 | None:intergenic | 40.0% | |
| AGTAACTTCTCAGTCAAGCT+AGG | + | chr2_1:1109757-1109776 | Msa0186410:intron | 40.0% | |
| GATCGGTAAATCTTAGAGCA+TGG | - | chr2_1:1110382-1110401 | None:intergenic | 40.0% | |
| TGGGTCAAAAATTGGTCCAA+CGG | + | chr2_1:1110414-1110433 | Msa0186410:CDS | 40.0% | |
| AAAAATTGGTCCAACGGATG+AGG | + | chr2_1:1110420-1110439 | Msa0186410:CDS | 40.0% | |
| GACAGACAAGCGTATAAAAG+AGG | - | chr2_1:1110501-1110520 | None:intergenic | 40.0% | |
| CCTGGGAAAGTGAATTAAAC+AGG | - | chr2_1:1110523-1110542 | None:intergenic | 40.0% | |
| CCTGTTTAATTCACTTTCCC+AGG | + | chr2_1:1110520-1110539 | Msa0186410:intron | 40.0% | |
| TAAATGGGCACAACTTCAAC+AGG | - | chr2_1:1110932-1110951 | None:intergenic | 40.0% | |
| GTGCCCATTTAGATAAAAGG+AGG | + | chr2_1:1110941-1110960 | Msa0186410:intron | 40.0% | |
| ! | GGTTTGAGGTAAGGGATTAA+AGG | + | chr2_1:1111223-1111242 | Msa0186410:intron | 40.0% |
| AGGTAAGGGATTAAAGGAGT+TGG | + | chr2_1:1111229-1111248 | Msa0186410:intron | 40.0% | |
| GGTAAGGGATTAAAGGAGTT+GGG | + | chr2_1:1111230-1111249 | Msa0186410:intron | 40.0% | |
| GTAAGGGATTAAAGGAGTTG+GGG | + | chr2_1:1111231-1111250 | Msa0186410:intron | 40.0% | |
| GGGGAGTTAAAAAAAGTCCA+AGG | + | chr2_1:1111250-1111269 | Msa0186410:intron | 40.0% | |
| !! | AAAGTCCAAGGTTTTAGCCT+TGG | + | chr2_1:1111262-1111281 | Msa0186410:intron | 40.0% |
| ! | TGATACTTTTCTCCTTGCCA+AGG | - | chr2_1:1111282-1111301 | None:intergenic | 40.0% |
| CCAGGGACTCTAATTTAACT+TGG | - | chr2_1:1111363-1111382 | None:intergenic | 40.0% | |
| CCAAGTTAAATTAGAGTCCC+TGG | + | chr2_1:1111360-1111379 | Msa0186410:intron | 40.0% | |
| CTATGTTAGAGAAGATGCCA+GGG | - | chr2_1:1111380-1111399 | None:intergenic | 40.0% | |
| TCTATGTTAGAGAAGATGCC+AGG | - | chr2_1:1111381-1111400 | None:intergenic | 40.0% | |
| GAGGAATGGAGGAATAAGAA+AGG | - | chr2_1:1111526-1111545 | None:intergenic | 40.0% | |
| GCCTGCTATCAAATTACACA+CGG | + | chr2_1:1111571-1111590 | Msa0186410:intron | 40.0% | |
| ! | TCCGTGTGTAATTTGATAGC+AGG | - | chr2_1:1111575-1111594 | None:intergenic | 40.0% |
| ACCTACTATCACATTTGAGG+GGG | - | chr2_1:1111649-1111668 | None:intergenic | 40.0% | |
| CACCTACTATCACATTTGAG+GGG | - | chr2_1:1111650-1111669 | None:intergenic | 40.0% | |
| CTCACCTACTATCACATTTG+AGG | - | chr2_1:1111652-1111671 | None:intergenic | 40.0% | |
| GTATAAATCGAGTGTCTCTG+AGG | + | chr2_1:1111682-1111701 | Msa0186410:intron | 40.0% | |
| ! | TCTTTGAGTAGAGAGAGCAT+TGG | + | chr2_1:1111713-1111732 | Msa0186410:intron | 40.0% |
| TGGTTAAAATATCAGCCAGC+TGG | + | chr2_1:1111733-1111752 | Msa0186410:intron | 40.0% | |
| !!! | CGTATTTTAAGGCCATGAGT+TGG | - | chr2_1:1112043-1112062 | None:intergenic | 40.0% |
| ! | CACTTCAGGGTCGTATTTTA+AGG | - | chr2_1:1112054-1112073 | None:intergenic | 40.0% |
| CTTAAAATACGACCCTGAAG+TGG | + | chr2_1:1112052-1112071 | Msa0186410:intron | 40.0% | |
| GATGATATAAGGTCCACTTC+AGG | - | chr2_1:1112068-1112087 | None:intergenic | 40.0% | |
| !! | TTACAAGGCACTGATAGTCA+TGG | - | chr2_1:1112169-1112188 | None:intergenic | 40.0% |
| ! | TTTGTTGTCAAATCCCAACG+GGG | + | chr2_1:1112385-1112404 | Msa0186410:intron | 40.0% |
| GGATTGAGGATGAATTTGGA+TGG | + | chr2_1:1112430-1112449 | Msa0186410:intron | 40.0% | |
| ATGAAATAAGGGAACCCACT+TGG | + | chr2_1:1112859-1112878 | Msa0186410:intron | 40.0% | |
| TGAAATAAGGGAACCCACTT+GGG | + | chr2_1:1112860-1112879 | Msa0186410:intron | 40.0% | |
| ATTGAACCTAAGACCTTGAG+AGG | - | chr2_1:1112925-1112944 | None:intergenic | 40.0% | |
| TTCTCTCTGTTGCCAATTTC+GGG | + | chr2_1:1112944-1112963 | Msa0186410:intron | 40.0% | |
| GAGACCTTCGTATTTAGACT+AGG | + | chr2_1:1113135-1113154 | Msa0186410:intron | 40.0% | |
| TGGACCTAGTCTAAATACGA+AGG | - | chr2_1:1113142-1113161 | None:intergenic | 40.0% | |
| TCCATATTACAGACTGCACT+TGG | + | chr2_1:1113158-1113177 | Msa0186410:intron | 40.0% | |
| ACCAAGTGCAGTCTGTAATA+TGG | - | chr2_1:1113162-1113181 | None:intergenic | 40.0% | |
| AAGTTCGATCCACTTCTTTC+TGG | + | chr2_1:1113280-1113299 | Msa0186410:intron | 40.0% | |
| AAATCTGCACCAGAAAGAAG+TGG | - | chr2_1:1113292-1113311 | None:intergenic | 40.0% | |
| CCAGAAAATGCAAGCATATC+AGG | - | chr2_1:1113318-1113337 | None:intergenic | 40.0% | |
| ! | CCTGATATGCTTGCATTTTC+TGG | + | chr2_1:1113315-1113334 | Msa0186410:CDS | 40.0% |
| ! | GCATTTTCTGGATGTGACTA+TGG | + | chr2_1:1113327-1113346 | Msa0186410:CDS | 40.0% |
| ! | TTTTCTGGATGTGACTATGG+TGG | + | chr2_1:1113330-1113349 | Msa0186410:CDS | 40.0% |
| AGAGAAGGAACATAAGGAAC+TGG | + | chr2_1:1113356-1113375 | Msa0186410:CDS | 40.0% | |
| GAGAAGGAACATAAGGAACT+GGG | + | chr2_1:1113357-1113376 | Msa0186410:CDS | 40.0% | |
| GATGGAAGACACTACATGTA+AGG | + | chr2_1:1113394-1113413 | Msa0186410:intron | 40.0% | |
| TGGCTAGATGCCAAGTAAAT+AGG | + | chr2_1:1113641-1113660 | Msa0186410:intron | 40.0% | |
| TTTCTCATGCAAACATGGTC+AGG | - | chr2_1:1113691-1113710 | None:intergenic | 40.0% | |
| TGCAGAAAAGCAATCCTGAT+AGG | + | chr2_1:1113756-1113775 | Msa0186410:intron | 40.0% | |
| GCAGAAAAGCAATCCTGATA+GGG | + | chr2_1:1113757-1113776 | Msa0186410:intron | 40.0% | |
| !! | AAATGGTTCTAGTTCCTCCT+TGG | - | chr2_1:1113963-1113982 | None:intergenic | 40.0% |
| CTAAAATATTAGCCGGACGA+AGG | + | chr2_1:1114071-1114090 | Msa0186410:CDS | 40.0% | |
| TGAACAGAAGTAACTCGACT+TGG | + | chr2_1:1114255-1114274 | Msa0186410:CDS | 40.0% | |
| GAACAGAAGTAACTCGACTT+GGG | + | chr2_1:1114256-1114275 | Msa0186410:CDS | 40.0% | |
| ! | TTTCTGGAAAGTACGAACAC+TGG | - | chr2_1:1114294-1114313 | None:intergenic | 40.0% |
| AGTGTTCGTACTTTCCAGAA+AGG | + | chr2_1:1114293-1114312 | Msa0186410:CDS | 40.0% | |
| TACTTTCCAGAAAGGCTTCA+TGG | + | chr2_1:1114301-1114320 | Msa0186410:CDS | 40.0% | |
| ACTTTCCAGAAAGGCTTCAT+GGG | + | chr2_1:1114302-1114321 | Msa0186410:CDS | 40.0% | |
| TCTTCACATATGCAGGTAGA+TGG | - | chr2_1:1114374-1114393 | None:intergenic | 40.0% | |
| CACAGAATCTTCACATATGC+AGG | - | chr2_1:1114381-1114400 | None:intergenic | 40.0% | |
| CTGCATATGTGAAGATTCTG+TGG | + | chr2_1:1114379-1114398 | Msa0186410:intron | 40.0% | |
| TGAAGATTCTGTGGCCAAAT+TGG | + | chr2_1:1114388-1114407 | Msa0186410:intron | 40.0% | |
| AGTTGTAGCAAATGATGAGG+TGG | + | chr2_1:1114460-1114479 | Msa0186410:intron | 40.0% | |
| !! | GGATGTTGATGATAATGACG+AGG | + | chr2_1:1114481-1114500 | Msa0186410:intron | 40.0% |
| GTTATGTCGAATGAGTCAAC+AGG | - | chr2_1:1114662-1114681 | None:intergenic | 40.0% | |
| GATCAGAAGTTAGCAATGAG+TGG | + | chr2_1:1114917-1114936 | Msa0186410:intron | 40.0% | |
| GAAGTTAGCAATGAGTGGAA+TGG | + | chr2_1:1114922-1114941 | Msa0186410:intron | 40.0% | |
| GTATGCAGCTAGATGTCAAA+TGG | - | chr2_1:1114956-1114975 | None:intergenic | 40.0% | |
| !! | AATGGAGTTTGCTAGGATGT+AGG | + | chr2_1:1114978-1114997 | Msa0186410:intron | 40.0% |
| TCGGGCACAAAAACTTAACT+AGG | - | chr2_1:1115109-1115128 | None:intergenic | 40.0% | |
| CGAAGTTAATGTAGCAGTAG+TGG | + | chr2_1:1115126-1115145 | Msa0186410:intron | 40.0% | |
| AAAGACTAACTACACCTACC+GGG | - | chr2_1:1115160-1115179 | None:intergenic | 40.0% | |
| ! | GCTCTTTTGTATAGAGCAGT+CGG | + | chr2_1:1115291-1115310 | Msa0186410:intron | 40.0% |
| CGCTTTCGGTTCATCGAAAT+TGG | - | chr2_1:1107230-1107249 | None:intergenic | 45.0% | |
| ! | AACAAACGGGAGTACGCTTT+CGG | - | chr2_1:1107244-1107263 | None:intergenic | 45.0% |
| AAACTGTATGGCAACGAAGG+CGG | + | chr2_1:1107353-1107372 | Msa0186410:five_prime_UTR | 45.0% | |
| GTGTGAATGATGAACGTTGC+TGG | - | chr2_1:1107407-1107426 | None:intergenic | 45.0% | |
| !! | GGAAGCGTTGATAAAAGTGG+TGG | - | chr2_1:1107727-1107746 | None:intergenic | 45.0% |
| !! | GACGGAAGCGTTGATAAAAG+TGG | - | chr2_1:1107730-1107749 | None:intergenic | 45.0% |
| GAAGAGAAAAAGTAGAGCGG+CGG | - | chr2_1:1107780-1107799 | None:intergenic | 45.0% | |
| TGATCGGAATCGATAGGAGA+AGG | - | chr2_1:1107824-1107843 | None:intergenic | 45.0% | |
| AAAACCTGAGTTCCGTGTTC+CGG | + | chr2_1:1108008-1108027 | Msa0186410:CDS | 45.0% | |
| !!! | GTTCCGGTTAGTGCTTTTTC+TGG | + | chr2_1:1108024-1108043 | Msa0186410:intron | 45.0% |
| ! | AAGAACTGGGGTACTTTCTC+TGG | + | chr2_1:1108376-1108395 | Msa0186410:intron | 45.0% |
| !! | GGGACTAAATTTGTTGGAGC+TGG | + | chr2_1:1108579-1108598 | Msa0186410:intron | 45.0% |
| TTTCTCGAGTCTAGTGCTCA+TGG | + | chr2_1:1108659-1108678 | Msa0186410:intron | 45.0% | |
| ! | AAGTCTTGTCCCACTAAGTG+GGG | - | chr2_1:1108747-1108766 | None:intergenic | 45.0% |
| ! | CAAGTCTTGTCCCACTAAGT+GGG | - | chr2_1:1108748-1108767 | None:intergenic | 45.0% |
| AATTGGATCAGCGGTCTTAC+TGG | + | chr2_1:1109096-1109115 | Msa0186410:CDS | 45.0% | |
| AAGCAACTCCCAAGCAGTAA+GGG | + | chr2_1:1109312-1109331 | Msa0186410:CDS | 45.0% | |
| !!! | ACACGCTTTTTCACGAGTAC+AGG | - | chr2_1:1109414-1109433 | None:intergenic | 45.0% |
| TTACTTCAGGCACCACACAT+CGG | - | chr2_1:1109742-1109761 | None:intergenic | 45.0% | |
| AAGCTGTAGTCTGTACCAAC+TGG | + | chr2_1:1110141-1110160 | Msa0186410:intron | 45.0% | |
| TTGACTACAGGCTTGCAAAC+AGG | + | chr2_1:1110315-1110334 | Msa0186410:CDS | 45.0% | |
| TCTTTCTCATCCTCATCCGT+TGG | - | chr2_1:1110433-1110452 | None:intergenic | 45.0% | |
| GCATACATTTGGAGGAATGG+AGG | - | chr2_1:1111537-1111556 | None:intergenic | 45.0% | |
| CCTACTATCACATTTGAGGG+GGG | - | chr2_1:1111648-1111667 | None:intergenic | 45.0% | |
| ATGTGATAGTAGGTGAGCCA+AGG | + | chr2_1:1111655-1111674 | Msa0186410:intron | 45.0% | |
| GTCTAAGAAACAACCTCTGG+TGG | - | chr2_1:1112010-1112029 | None:intergenic | 45.0% | |
| GTGGTCTAAGAAACAACCTC+TGG | - | chr2_1:1112013-1112032 | None:intergenic | 45.0% | |
| ACCACCAAGAAACCAACTCA+TGG | + | chr2_1:1112028-1112047 | Msa0186410:intron | 45.0% | |
| !! | AAGGCCATGAGTTGGTTTCT+TGG | - | chr2_1:1112035-1112054 | None:intergenic | 45.0% |
| TTGTTGTCAAATCCCAACGG+GGG | + | chr2_1:1112386-1112405 | Msa0186410:intron | 45.0% | |
| CCAATTTACATTCCCCCGTT+GGG | - | chr2_1:1112401-1112420 | None:intergenic | 45.0% | |
| CCAACGGGGGAATGTAAATT+GGG | + | chr2_1:1112399-1112418 | Msa0186410:intron | 45.0% | |
| ATATTCCGACCGTGTGAACA+CGG | - | chr2_1:1112459-1112478 | None:intergenic | 45.0% | |
| TCACACGGTCGGAATATCAA+TGG | + | chr2_1:1112462-1112481 | Msa0186410:intron | 45.0% | |
| ! | TACAGACTGCACTTGGTAGT+TGG | + | chr2_1:1113165-1113184 | Msa0186410:intron | 45.0% |
| TGGAGGAGAGAAGGAACATA+AGG | + | chr2_1:1113350-1113369 | Msa0186410:CDS | 45.0% | |
| ATAAGGAACTGGGCGCAATA+AGG | + | chr2_1:1113367-1113386 | Msa0186410:CDS | 45.0% | |
| ATGGTCTTTAACCCTGCTTG+TGG | + | chr2_1:1113621-1113640 | Msa0186410:intron | 45.0% | |
| ! | CATTAGACCGACTTCTTCTG+GGG | - | chr2_1:1113810-1113829 | None:intergenic | 45.0% |
| ! | GCATTAGACCGACTTCTTCT+GGG | - | chr2_1:1113811-1113830 | None:intergenic | 45.0% |
| ! | AGCATTAGACCGACTTCTTC+TGG | - | chr2_1:1113812-1113831 | None:intergenic | 45.0% |
| !! | GGTCTAATGCTAAGAGCGTT+GGG | + | chr2_1:1113821-1113840 | Msa0186410:CDS | 45.0% |
| !! | GTCTAATGCTAAGAGCGTTG+GGG | + | chr2_1:1113822-1113841 | Msa0186410:CDS | 45.0% |
| ! | GCATCTGGGGAAGTATATAG+AGG | + | chr2_1:1113872-1113891 | Msa0186410:intron | 45.0% |
| AGAAACCATTGCTACCAAGG+AGG | + | chr2_1:1113946-1113965 | Msa0186410:CDS | 45.0% | |
| ! | TAGTTCCTCCTTGGTAGCAA+TGG | - | chr2_1:1113954-1113973 | None:intergenic | 45.0% |
| AAGTTGAGCATACCTTCGTC+CGG | - | chr2_1:1114086-1114105 | None:intergenic | 45.0% | |
| CTTTCCAGAAAGGCTTCATG+GGG | + | chr2_1:1114303-1114322 | Msa0186410:CDS | 45.0% | |
| TTTCCAGAAAGGCTTCATGG+GGG | + | chr2_1:1114304-1114323 | Msa0186410:CDS | 45.0% | |
| ! | GAACTTTGAGGATCCAGAGT+TGG | + | chr2_1:1114589-1114608 | Msa0186410:intron | 45.0% |
| ATCGAGCACTAGCTGCTTAA+GGG | - | chr2_1:1114685-1114704 | None:intergenic | 45.0% | |
| AATCGAGCACTAGCTGCTTA+AGG | - | chr2_1:1114686-1114705 | None:intergenic | 45.0% | |
| TTAGCAATGAGTGGAATGGG+AGG | + | chr2_1:1114926-1114945 | Msa0186410:intron | 45.0% | |
| AACAGCTACAACTGAAGACG+AGG | + | chr2_1:1115318-1115337 | Msa0186410:CDS | 45.0% | |
| !! | TTAATATAAAATACTAAATT+TGG | + | chr2_1:1112540-1112559 | Msa0186410:intron | 5.0% |
| !! | TTAAAAAAATGAAATAAATA+AGG | + | chr2_1:1112982-1113001 | Msa0186410:intron | 5.0% |
| !! | TAAAAAAATGAAATAAATAA+GGG | + | chr2_1:1112983-1113002 | Msa0186410:intron | 5.0% |
| TGATGAACGTTGCTGGGTTC+TGG | - | chr2_1:1107400-1107419 | None:intergenic | 50.0% | |
| TGGAGGAGGAGACACCAATT+TGG | - | chr2_1:1107643-1107662 | None:intergenic | 50.0% | |
| TTGTGAGAATGGGAGAGAGG+TGG | - | chr2_1:1107663-1107682 | None:intergenic | 50.0% | |
| ACCTCTCTCCCATTCTCACA+AGG | + | chr2_1:1107662-1107681 | Msa0186410:five_prime_UTR | 50.0% | |
| CCTCTCTCCCATTCTCACAA+GGG | + | chr2_1:1107663-1107682 | Msa0186410:five_prime_UTR | 50.0% | |
| GCGTCTCCGGTGTATATGAT+CGG | - | chr2_1:1107840-1107859 | None:intergenic | 50.0% | |
| TTCTCGAACTCCACACATCG+CGG | - | chr2_1:1108151-1108170 | None:intergenic | 50.0% | |
| !! | CGTACTTGGAAACTTGCTGC+TGG | - | chr2_1:1108204-1108223 | None:intergenic | 50.0% |
| TTCAGCGTCTGCGATTGGAA+AGG | - | chr2_1:1108297-1108316 | None:intergenic | 50.0% | |
| ! | CCAAGTCTTGTCCCACTAAG+TGG | - | chr2_1:1108749-1108768 | None:intergenic | 50.0% |
| CCACTTAGTGGGACAAGACT+TGG | + | chr2_1:1108746-1108765 | Msa0186410:intron | 50.0% | |
| ! | GTTTTCAGATCCTACCCGCT+TGG | + | chr2_1:1108805-1108824 | Msa0186410:intron | 50.0% |
| AACAGAAAAGCCAAGCGGGT+AGG | - | chr2_1:1108818-1108837 | None:intergenic | 50.0% | |
| CAAGCAACTCCCAAGCAGTA+AGG | + | chr2_1:1109311-1109330 | Msa0186410:CDS | 50.0% | |
| AACTCCCAAGCAGTAAGGGT+CGG | + | chr2_1:1109316-1109335 | Msa0186410:CDS | 50.0% | |
| CTTTCCGACCCTTACTGCTT+GGG | - | chr2_1:1109323-1109342 | None:intergenic | 50.0% | |
| TGCATTTCCTTGGAACACGC+AGG | - | chr2_1:1109362-1109381 | None:intergenic | 50.0% | |
| TACTTCAGGCACCACACATC+GGG | - | chr2_1:1109741-1109760 | None:intergenic | 50.0% | |
| CTACAGGCTTGCAAACAGGT+TGG | + | chr2_1:1110319-1110338 | Msa0186410:CDS | 50.0% | |
| CCTTGCCAAGGCTAAAACCT+TGG | - | chr2_1:1111270-1111289 | None:intergenic | 50.0% | |
| !!! | CCAAGGTTTTAGCCTTGGCA+AGG | + | chr2_1:1111267-1111286 | Msa0186410:intron | 50.0% |
| ACTATCACATTTGAGGGGGG+AGG | - | chr2_1:1111645-1111664 | None:intergenic | 50.0% | |
| CCCCCCTCAAATGTGATAGT+AGG | + | chr2_1:1111645-1111664 | Msa0186410:intron | 50.0% | |
| AGAGGCTAAATCGAGTAGCC+AGG | - | chr2_1:1111974-1111993 | None:intergenic | 50.0% | |
| GGTGGCTATATCTAGTGCAG+AGG | - | chr2_1:1111992-1112011 | None:intergenic | 50.0% | |
| GCACTAGATATAGCCACCAG+AGG | + | chr2_1:1111994-1112013 | Msa0186410:intron | 50.0% | |
| !! | GCCATGAGTTGGTTTCTTGG+TGG | - | chr2_1:1112032-1112051 | None:intergenic | 50.0% |
| TTCCCAATCTGCATCACAGC+AGG | + | chr2_1:1112097-1112116 | Msa0186410:intron | 50.0% | |
| AGCCTGCTGTGATGCAGATT+GGG | - | chr2_1:1112102-1112121 | None:intergenic | 50.0% | |
| TGCATCACAGCAGGCTGTTA+TGG | + | chr2_1:1112106-1112125 | Msa0186410:intron | 50.0% | |
| CCCAACGGGGGAATGTAAAT+TGG | + | chr2_1:1112398-1112417 | Msa0186410:intron | 50.0% | |
| CCCAATTTACATTCCCCCGT+TGG | - | chr2_1:1112402-1112421 | None:intergenic | 50.0% | |
| TATTCCGACCGTGTGAACAC+GGG | - | chr2_1:1112458-1112477 | None:intergenic | 50.0% | |
| ATCACCAGGCTAACCCAAGT+GGG | - | chr2_1:1112876-1112895 | None:intergenic | 50.0% | |
| !! | TTGGGTTAGCCTGGTGATGT+TGG | + | chr2_1:1112878-1112897 | Msa0186410:intron | 50.0% |
| ! | TTAGCCTGGTGATGTTGGCT+TGG | + | chr2_1:1112883-1112902 | Msa0186410:intron | 50.0% |
| !! | TAGCCTGGTGATGTTGGCTT+GGG | + | chr2_1:1112884-1112903 | Msa0186410:intron | 50.0% |
| TGTGCTCCTCTCAAGGTCTT+AGG | + | chr2_1:1112916-1112935 | Msa0186410:intron | 50.0% | |
| CTGTTGCCAATTTCGGGAGT+TGG | + | chr2_1:1112950-1112969 | Msa0186410:intron | 50.0% | |
| ! | GCCAATTTCGGGAGTTGGTT+TGG | + | chr2_1:1112955-1112974 | Msa0186410:intron | 50.0% |
| GCCAAACCAACTCCCGAAAT+TGG | - | chr2_1:1112959-1112978 | None:intergenic | 50.0% | |
| TCTGGATGTGACTATGGTGG+AGG | + | chr2_1:1113333-1113352 | Msa0186410:CDS | 50.0% | |
| ! | TGACTATGGTGGAGGAGAGA+AGG | + | chr2_1:1113341-1113360 | Msa0186410:CDS | 50.0% |
| TTGGCATCTAGCCACAAGCA+GGG | - | chr2_1:1113635-1113654 | None:intergenic | 50.0% | |
| AAAGCAATCCTGATAGGGCC+AGG | + | chr2_1:1113762-1113781 | Msa0186410:CDS | 50.0% | |
| !! | CCGACTTCTTCTGGGGTTAA+CGG | - | chr2_1:1113803-1113822 | None:intergenic | 50.0% |
| CCGTTAACCCCAGAAGAAGT+CGG | + | chr2_1:1113800-1113819 | Msa0186410:CDS | 50.0% | |
| ! | CGGTCTAATGCTAAGAGCGT+TGG | + | chr2_1:1113820-1113839 | Msa0186410:CDS | 50.0% |
| !! | ATGCTAAGAGCGTTGGGGTA+TGG | + | chr2_1:1113827-1113846 | Msa0186410:intron | 50.0% |
| CTACCAGGTCTAACCTCCTT+TGG | - | chr2_1:1114332-1114351 | None:intergenic | 50.0% | |
| AAGGAGGTTAGACCTGGTAG+AGG | + | chr2_1:1114332-1114351 | Msa0186410:CDS | 50.0% | |
| AGGTTAGACCTGGTAGAGGA+GGG | + | chr2_1:1114336-1114355 | Msa0186410:CDS | 50.0% | |
| TCATGAAACCCTCCTCTACC+AGG | - | chr2_1:1114347-1114366 | None:intergenic | 50.0% | |
| ! | CTTTGAGGATCCAGAGTTGG+AGG | + | chr2_1:1114592-1114611 | Msa0186410:intron | 50.0% |
| TCGAGCACTAGCTGCTTAAG+GGG | - | chr2_1:1114684-1114703 | None:intergenic | 50.0% | |
| TGGCTGAGCTGAACTTGAAG+TGG | + | chr2_1:1114765-1114784 | Msa0186410:intron | 50.0% | |
| TGAGAATGGGAGAGAGGTGG+AGG | - | chr2_1:1107660-1107679 | None:intergenic | 55.0% | |
| CCCTTGTGAGAATGGGAGAG+AGG | - | chr2_1:1107666-1107685 | None:intergenic | 55.0% | |
| CAAAAATGGCGGTTCAGCGG+CGG | + | chr2_1:1107699-1107718 | Msa0186410:exon | 55.0% | |
| AAAAAGTAGAGCGGCGGCGA+CGG | - | chr2_1:1107774-1107793 | None:intergenic | 55.0% | |
| CTAACCGGAACACGGAACTC+AGG | - | chr2_1:1108015-1108034 | None:intergenic | 55.0% | |
| ATCCTGCTGACCCCACTTAG+TGG | + | chr2_1:1108734-1108753 | Msa0186410:intron | 55.0% | |
| TCCTGCTGACCCCACTTAGT+GGG | + | chr2_1:1108735-1108754 | Msa0186410:intron | 55.0% | |
| GCTTTCCGACCCTTACTGCT+TGG | - | chr2_1:1109324-1109343 | None:intergenic | 55.0% | |
| CATACAGCCTGCGTGTTCCA+AGG | + | chr2_1:1109352-1109371 | Msa0186410:CDS | 55.0% | |
| ACTTCAGGCACCACACATCG+GGG | - | chr2_1:1109740-1109759 | None:intergenic | 55.0% | |
| CAGCCTGCTGTGATGCAGAT+TGG | - | chr2_1:1112103-1112122 | None:intergenic | 55.0% | |
| GGATGGATCCCGTGTTCACA+CGG | + | chr2_1:1112447-1112466 | Msa0186410:intron | 55.0% | |
| CATCACCAGGCTAACCCAAG+TGG | - | chr2_1:1112877-1112896 | None:intergenic | 55.0% | |
| !! | GTGATGTTGGCTTGGGACCT+TGG | + | chr2_1:1112891-1112910 | Msa0186410:intron | 55.0% |
| ! | CTTGAGAGGAGCACACTCCA+AGG | - | chr2_1:1112911-1112930 | None:intergenic | 55.0% |
| CTTGGAGTGTGCTCCTCTCA+AGG | + | chr2_1:1112909-1112928 | Msa0186410:intron | 55.0% | |
| AGGAACTGGGCGCAATAAGG+AGG | + | chr2_1:1113370-1113389 | Msa0186410:CDS | 55.0% | |
| TGGGCGCAATAAGGAGGAGA+TGG | + | chr2_1:1113376-1113395 | Msa0186410:CDS | 55.0% | |
| CTTGGCATCTAGCCACAAGC+AGG | - | chr2_1:1113636-1113655 | None:intergenic | 55.0% | |
| GAGCCAAAGGAGGTTAGACC+TGG | + | chr2_1:1114326-1114345 | Msa0186410:CDS | 55.0% | |
| GAGGTTAGACCTGGTAGAGG+AGG | + | chr2_1:1114335-1114354 | Msa0186410:CDS | 55.0% | |
| GCAGTAGTGGTCTGATGACC+CGG | + | chr2_1:1115139-1115158 | Msa0186410:intron | 55.0% | |
| TAGTGGTCTGATGACCCGGT+AGG | + | chr2_1:1115143-1115162 | Msa0186410:intron | 55.0% | |
| AGTTCACGTGGGCACGTGCA+AGG | + | chr2_1:1107295-1107314 | Msa0186410:five_prime_UTR | 60.0% | |
| GTTCACGTGGGCACGTGCAA+GGG | + | chr2_1:1107296-1107315 | Msa0186410:five_prime_UTR | 60.0% | |
| GAATGGGAGAGAGGTGGAGG+AGG | - | chr2_1:1107657-1107676 | None:intergenic | 60.0% | |
| ! | CCGTGATGTGTTGGCGTCTC+CGG | - | chr2_1:1107853-1107872 | None:intergenic | 60.0% |
| CCGGAGACGCCAACACATCA+CGG | + | chr2_1:1107850-1107869 | Msa0186410:CDS | 60.0% | |
| GAAAGCTGAGCCGCGATGTG+TGG | + | chr2_1:1108138-1108157 | Msa0186410:CDS | 60.0% | |
| GCTGCTTCAGCGTCTGCGAT+TGG | - | chr2_1:1108302-1108321 | None:intergenic | 60.0% | |
| TCCCACTAAGTGGGGTCAGC+AGG | - | chr2_1:1108739-1108758 | None:intergenic | 60.0% | |
| !! | TCAGCCAGCTGGTCTTCTGC+AGG | + | chr2_1:1111744-1111763 | Msa0186410:intron | 60.0% |
| !! | CAGCCAGCTGGTCTTCTGCA+GGG | + | chr2_1:1111745-1111764 | Msa0186410:intron | 60.0% |
| CATCCCTGCAGAAGACCAGC+TGG | - | chr2_1:1111751-1111770 | None:intergenic | 60.0% | |
| TTTCTGCCGCTGTTGCTGCC+TGG | + | chr2_1:1111953-1111972 | Msa0186410:intron | 60.0% | |
| GAGTAGCCAGGCAGCAACAG+CGG | - | chr2_1:1111962-1111981 | None:intergenic | 60.0% | |
| GGATCCCGTGTTCACACGGT+CGG | + | chr2_1:1112451-1112470 | Msa0186410:intron | 60.0% | |
| !! | GGAACCCACTTGGGTTAGCC+TGG | + | chr2_1:1112869-1112888 | Msa0186410:intron | 60.0% |
| GGTCCCAAGCCAACATCACC+AGG | - | chr2_1:1112890-1112909 | None:intergenic | 60.0% | |
| GCAATCCTGATAGGGCCAGG+AGG | + | chr2_1:1113765-1113784 | Msa0186410:CDS | 60.0% | |
| GCTCCCCCATGAAGCCTTTC+TGG | - | chr2_1:1114310-1114329 | None:intergenic | 60.0% | |
| AGGCTTCATGGGGGAGCCAA+AGG | + | chr2_1:1114313-1114332 | Msa0186410:CDS | 60.0% | |
| CTTCATGGGGGAGCCAAAGG+AGG | + | chr2_1:1114316-1114335 | Msa0186410:CDS | 60.0% | |
| GCGGCGACGGCGGAAATCAT+CGG | - | chr2_1:1107761-1107780 | None:intergenic | 65.0% | |
| TCCTGATAGGGCCAGGAGGC+AGG | + | chr2_1:1113769-1113788 | Msa0186410:CDS | 65.0% | |
| CCTGATAGGGCCAGGAGGCA+GGG | + | chr2_1:1113770-1113789 | Msa0186410:CDS | 65.0% | |
| CGGACATCTTCCCTGCCTCC+TGG | - | chr2_1:1113783-1113802 | None:intergenic | 65.0% | |
| AAGTAGAGCGGCGGCGACGG+CGG | - | chr2_1:1107771-1107790 | None:intergenic | 70.0% | |
| CCCTGCCTCCTGGCCCTATC+AGG | - | chr2_1:1113773-1113792 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 1107219 | 1115351 | 1107219 | ID=Msa0186410;Name=Msa0186410 |
| chr2_1 | mRNA | 1107219 | 1115351 | 1107219 | ID=Msa0186410-mRNA-1;Parent=Msa0186410;Name=Msa0186410-mRNA-1;_AED=0.21;_eAED=0.21;_QI=485|0.81|0.66|0.91|0.90|0.91|12|0|492 |
| chr2_1 | exon | 1107219 | 1107871 | 1107219 | ID=Msa0186410-mRNA-1:exon:465;Parent=Msa0186410-mRNA-1 |
| chr2_1 | exon | 1107979 | 1108029 | 1107979 | ID=Msa0186410-mRNA-1:exon:466;Parent=Msa0186410-mRNA-1 |
| chr2_1 | exon | 1108128 | 1108218 | 1108128 | ID=Msa0186410-mRNA-1:exon:467;Parent=Msa0186410-mRNA-1 |
| chr2_1 | exon | 1108309 | 1108385 | 1108309 | ID=Msa0186410-mRNA-1:exon:468;Parent=Msa0186410-mRNA-1 |
| chr2_1 | exon | 1109041 | 1109129 | 1109041 | ID=Msa0186410-mRNA-1:exon:469;Parent=Msa0186410-mRNA-1 |
| chr2_1 | exon | 1109245 | 1109431 | 1109245 | ID=Msa0186410-mRNA-1:exon:470;Parent=Msa0186410-mRNA-1 |
| chr2_1 | exon | 1110296 | 1110477 | 1110296 | ID=Msa0186410-mRNA-1:exon:471;Parent=Msa0186410-mRNA-1 |
| chr2_1 | exon | 1113308 | 1113410 | 1113308 | ID=Msa0186410-mRNA-1:exon:472;Parent=Msa0186410-mRNA-1 |
| chr2_1 | exon | 1113761 | 1113843 | 1113761 | ID=Msa0186410-mRNA-1:exon:473;Parent=Msa0186410-mRNA-1 |
| chr2_1 | exon | 1113892 | 1114092 | 1113892 | ID=Msa0186410-mRNA-1:exon:474;Parent=Msa0186410-mRNA-1 |
| chr2_1 | exon | 1114193 | 1114397 | 1114193 | ID=Msa0186410-mRNA-1:exon:475;Parent=Msa0186410-mRNA-1 |
| chr2_1 | exon | 1115310 | 1115351 | 1115310 | ID=Msa0186410-mRNA-1:exon:476;Parent=Msa0186410-mRNA-1 |
| chr2_1 | five_prime_UTR | 1107219 | 1107703 | 1107219 | ID=Msa0186410-mRNA-1:five_prime_utr;Parent=Msa0186410-mRNA-1 |
| chr2_1 | CDS | 1107704 | 1107871 | 1107704 | ID=Msa0186410-mRNA-1:cds;Parent=Msa0186410-mRNA-1 |
| chr2_1 | CDS | 1107979 | 1108029 | 1107979 | ID=Msa0186410-mRNA-1:cds;Parent=Msa0186410-mRNA-1 |
| chr2_1 | CDS | 1108128 | 1108218 | 1108128 | ID=Msa0186410-mRNA-1:cds;Parent=Msa0186410-mRNA-1 |
| chr2_1 | CDS | 1108309 | 1108385 | 1108309 | ID=Msa0186410-mRNA-1:cds;Parent=Msa0186410-mRNA-1 |
| chr2_1 | CDS | 1109041 | 1109129 | 1109041 | ID=Msa0186410-mRNA-1:cds;Parent=Msa0186410-mRNA-1 |
| chr2_1 | CDS | 1109245 | 1109431 | 1109245 | ID=Msa0186410-mRNA-1:cds;Parent=Msa0186410-mRNA-1 |
| chr2_1 | CDS | 1110296 | 1110477 | 1110296 | ID=Msa0186410-mRNA-1:cds;Parent=Msa0186410-mRNA-1 |
| chr2_1 | CDS | 1113308 | 1113410 | 1113308 | ID=Msa0186410-mRNA-1:cds;Parent=Msa0186410-mRNA-1 |
| chr2_1 | CDS | 1113761 | 1113843 | 1113761 | ID=Msa0186410-mRNA-1:cds;Parent=Msa0186410-mRNA-1 |
| chr2_1 | CDS | 1113892 | 1114092 | 1113892 | ID=Msa0186410-mRNA-1:cds;Parent=Msa0186410-mRNA-1 |
| chr2_1 | CDS | 1114193 | 1114397 | 1114193 | ID=Msa0186410-mRNA-1:cds;Parent=Msa0186410-mRNA-1 |
| chr2_1 | CDS | 1115310 | 1115351 | 1115310 | ID=Msa0186410-mRNA-1:cds;Parent=Msa0186410-mRNA-1 |
| Gene Sequence |
| Protein sequence |