AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0192110

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0192110 MtrunA17_Chr2g0282091 96.169 496 18 1 1 496 1 495 0.0 986
Msa0192110 MtrunA17_Chr8g0359961 49.567 462 231 2 19 479 23 483 1.61e-161 467
Msa0192110 MtrunA17_Chr8g0368151 31.788 453 305 3 30 479 24 475 2.53e-81 261
Msa0192110 MtrunA17_Chr4g0021331 31.933 476 311 8 19 486 17 487 2.66e-70 232
Msa0192110 MtrunA17_Chr2g0303221 32.412 398 265 4 19 414 21 416 1.70e-65 219
Msa0192110 MtrunA17_Chr1g0194521 30.464 453 303 7 27 477 88 530 2.86e-65 220
Msa0192110 MtrunA17_Chr2g0324251 30.512 449 300 4 4 444 7 451 4.23e-65 218
Msa0192110 MtrunA17_Chr1g0185601 30.716 433 290 5 63 490 71 498 1.91e-62 212
Msa0192110 MtrunA17_Chr3g0132571 28.454 485 338 4 7 488 20 498 1.16e-61 209
Msa0192110 MtrunA17_Chr1g0155351 31.081 296 202 2 49 343 74 368 8.89e-46 164
Msa0192110 MtrunA17_Chr7g0256181 27.679 448 290 10 44 478 171 597 6.14e-41 155
Msa0192110 MtrunA17_Chr1g0171501 26.339 448 296 9 44 478 154 580 2.36e-38 147
Msa0192110 MtrunA17_Chr8g0335951 28.311 219 156 1 226 444 190 407 2.52e-25 108
Msa0192110 MtrunA17_Chr8g0335951 29.358 218 127 3 27 217 70 287 2.01e-19 90.9
Msa0192110 MtrunA17_Chr2g0328121 21.689 438 329 6 44 473 58 489 1.20e-23 103
Msa0192110 MtrunA17_Chr8g0349421 26.289 194 142 1 251 444 3 195 4.28e-18 84.0
Msa0192110 MtrunA17_Chr8g0349431 36.667 120 75 1 38 156 2 121 9.38e-17 76.6
Msa0192110 MtrunA17_Chr8g0391651 23.739 337 234 8 142 466 289 614 4.65e-14 75.1
Msa0192110 MtrunA17_Chr8g0375231 22.192 365 258 9 136 488 225 575 1.61e-13 73.2
Msa0192110 MtrunA17_Chr1g0210801 21.656 314 207 4 68 379 214 490 8.47e-13 70.5
Msa0192110 MtrunA17_Chr1g0168811 27.240 279 184 6 126 395 248 516 1.03e-11 67.4
Msa0192110 MtrunA17_Chr1g0196741 22.105 380 273 10 94 461 277 645 1.41e-11 67.0
Msa0192110 MtrunA17_Chr7g0241871 22.148 298 215 5 116 403 183 473 2.54e-11 66.2
Msa0192110 MtrunA17_Chr4g0019851 22.305 269 197 4 132 397 200 459 3.11e-11 65.5
Msa0192110 MtrunA17_Chr1g0170071 21.562 320 247 3 79 396 356 673 3.17e-11 66.2
Msa0192110 MtrunA17_Chr5g0446031 20.048 414 310 9 71 474 422 824 3.39e-11 65.9
Msa0192110 MtrunA17_Chr2g0331911 22.792 351 237 12 142 475 172 505 3.68e-11 65.5
Msa0192110 MtrunA17_Chr5g0434021 21.005 438 277 13 73 494 305 689 3.91e-11 65.9
Msa0192110 MtrunA17_Chr8g0377751 22.764 246 183 4 67 310 773 1013 7.22e-11 65.1
Msa0192110 MtrunA17_Chr1g0162281 23.251 443 284 13 40 441 281 708 7.77e-11 64.7
Msa0192110 MtrunA17_Chr5g0419551 25.110 227 166 3 117 340 409 634 9.05e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0192110 AT4G21705.1 54.397 489 219 3 5 491 3 489 0.0 549
Msa0192110 AT1G60770.1 30.335 478 329 3 15 489 9 485 2.17e-79 256
Msa0192110 AT2G20710.1 34.568 405 261 3 39 442 48 449 1.08e-78 254
Msa0192110 AT4G01990.1 31.368 475 321 4 6 478 16 487 9.75e-74 242
Msa0192110 AT1G02150.1 30.736 462 299 4 30 476 68 523 2.87e-70 233
Msa0192110 AT4G02820.1 32.071 449 297 5 44 490 76 518 8.06e-68 227
Msa0192110 AT1G02370.1 30.398 477 328 4 6 479 48 523 1.48e-67 226
Msa0192110 AT2G20710.2 33.053 357 235 3 87 442 1 354 6.74e-62 207
Msa0192110 AT5G27460.1 30.000 440 302 3 44 478 53 491 5.60e-59 202
Msa0192110 AT1G28020.1 32.416 327 219 2 40 364 47 373 6.06e-53 186
Msa0192110 AT5G09450.1 29.904 311 216 2 27 335 53 363 5.41e-42 155
Msa0192110 AT1G15480.1 26.695 472 308 13 22 478 120 568 8.05e-41 155
Msa0192110 AT1G80270.1 25.482 467 323 9 20 478 121 570 2.11e-40 154
Msa0192110 AT1G80270.3 25.482 467 323 9 20 478 121 570 2.11e-40 154
Msa0192110 AT1G80270.2 25.482 467 323 9 20 478 121 570 2.11e-40 154
Msa0192110 AT1G80270.5 25.482 467 323 9 20 478 121 570 2.11e-40 154
Msa0192110 AT1G80270.4 25.482 467 323 9 20 478 121 570 2.11e-40 154
Msa0192110 AT3G15590.1 24.664 446 307 8 44 478 156 583 1.08e-34 137
Msa0192110 AT3G15590.2 24.664 446 307 8 44 478 156 583 1.08e-34 137
Msa0192110 AT1G28000.1 28.571 266 186 4 32 293 36 301 6.66e-30 121
Msa0192110 AT3G11380.1 30.696 316 181 7 64 374 78 360 6.60e-26 111
Msa0192110 AT3G11380.1 28.750 160 112 2 42 199 359 518 5.77e-14 74.7
Msa0192110 AT1G07590.1 22.654 437 328 5 43 473 79 511 2.67e-23 103
Msa0192110 AT1G43010.1 30.544 239 146 5 19 250 26 251 2.21e-22 97.1
Msa0192110 AT1G74850.1 21.849 476 344 14 33 496 84 543 9.67e-18 87.0
Msa0192110 AT1G05670.1 23.000 400 283 8 92 486 256 635 4.49e-17 84.7
Msa0192110 AT1G05670.2 23.000 400 283 8 92 486 256 635 4.49e-17 84.7
Msa0192110 AT1G05670.3 23.000 400 283 8 92 486 256 635 4.49e-17 84.7
Msa0192110 AT1G12775.1 25.240 313 208 8 90 396 201 493 1.76e-14 76.6
Msa0192110 AT3G23020.1 21.655 411 296 11 61 461 263 657 6.42e-14 75.1
Msa0192110 AT1G62910.1 22.129 357 252 10 132 476 225 567 3.76e-13 72.4
Msa0192110 AT1G19290.2 25.714 280 166 7 126 367 257 532 4.30e-13 72.4
Msa0192110 AT1G19290.1 25.714 280 166 7 126 367 257 532 4.30e-13 72.4
Msa0192110 AT1G09820.1 22.400 375 272 7 124 488 217 582 5.69e-13 71.6
Msa0192110 AT1G03560.1 22.812 377 265 10 128 488 143 509 1.45e-12 70.5
Msa0192110 AT2G31400.2 24.855 173 129 1 123 295 402 573 2.32e-12 70.1
Msa0192110 AT2G31400.1 24.855 173 129 1 123 295 402 573 2.43e-12 70.1
Msa0192110 AT1G63130.1 21.806 454 289 14 73 476 128 565 3.21e-12 69.3
Msa0192110 AT1G63130.2 21.806 454 289 14 73 476 128 565 3.21e-12 69.3
Msa0192110 AT1G79490.1 22.222 297 213 5 48 336 162 448 7.05e-12 68.6
Msa0192110 AT1G62930.1 22.409 357 251 10 132 476 222 564 1.03e-11 67.8
Msa0192110 AT1G62720.1 22.182 275 198 4 93 365 113 373 1.27e-11 67.0
Msa0192110 AT5G25630.3 21.083 351 257 7 135 474 69 410 2.13e-11 66.6
Msa0192110 AT5G25630.1 21.083 351 257 7 135 474 120 461 2.81e-11 66.2
Msa0192110 AT3G11350.1 26.797 153 92 3 75 223 54 190 3.51e-11 65.1
Msa0192110 AT5G42310.1 20.904 354 268 6 116 464 323 669 4.08e-11 65.9

Find 158 sgRNAs with CRISPR-Local

Find 190 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTGGTAACTGTTATGATTT+TGG 0.117352 2_1:+7822818 Msa0192110:CDS
GCACAAATCATCACTATTAT+TGG 0.198034 2_1:-7823739 None:intergenic
AGGATTACATGAACTATTAT+TGG 0.200056 2_1:-7823973 None:intergenic
GATACATGTGTCTATTCTTT+TGG 0.208098 2_1:-7823150 None:intergenic
TCTATCCCATTTGAAGAAAA+TGG 0.233772 2_1:+7822262 Msa0192110:CDS
ATGGTCCAGCAATTAAATTT+AGG 0.236635 2_1:-7823838 None:intergenic
TTTCCATATCCCATAGTCTT+AGG 0.254489 2_1:-7822685 None:intergenic
ATCCTTCAAGCTATTAAAAT+AGG 0.262548 2_1:-7822168 None:intergenic
TCTGTTTCACATTATATTCT+TGG 0.269510 2_1:+7823314 Msa0192110:three_prime_UTR
ACTCGGTTTCTTGGTCTTGC+TGG 0.271768 2_1:-7821659 None:intergenic
GCAGATCGATACTTGCTTAA+AGG 0.275587 2_1:+7822962 Msa0192110:CDS
GATCTTGTTGGAAGGGTTCA+TGG 0.277912 2_1:+7822128 Msa0192110:CDS
AGAATGAGGTCCTAAGACTA+TGG 0.279924 2_1:+7822675 Msa0192110:CDS
TGGTCCAGCAATTAAATTTA+GGG 0.286036 2_1:-7823837 None:intergenic
GAAGATAACATTGACGAAAC+TGG 0.297734 2_1:+7823238 Msa0192110:CDS
GCTCGATGATTGGGTCTATA+AGG 0.303740 2_1:+7821735 Msa0192110:CDS
AAGCATGGCTTCTGCTTTCT+CGG 0.320374 2_1:-7822885 None:intergenic
TCGAAGAAGCTTCCAATTCA+TGG 0.322077 2_1:-7821590 None:intergenic
CTGTTTCACATTATATTCTT+GGG 0.334098 2_1:+7823315 Msa0192110:three_prime_UTR
AAGCCATGCTTCAAGATATA+TGG 0.335530 2_1:+7822897 Msa0192110:CDS
GTTTCCCTAAATTTAATTGC+TGG 0.340210 2_1:+7823833 Msa0192110:three_prime_UTR
AGTTGAACACGCGGTGCATT+TGG 0.351285 2_1:+7822106 Msa0192110:CDS
GGAAAATTAAAGCGACAAAA+AGG 0.353211 2_1:+7823555 Msa0192110:three_prime_UTR
TGCTCCTCAGCTCGATGATT+GGG 0.355825 2_1:+7821726 Msa0192110:CDS
AAGCTTCCAATTCATGGTTA+TGG 0.356147 2_1:-7821584 None:intergenic
CTTGCAAGAGGTGCATAAAC+AGG 0.358900 2_1:+7822714 Msa0192110:CDS
AGAATCTGTATAGGTTCTTA+TGG 0.359558 2_1:+7822425 Msa0192110:CDS
TTATATTCTTGGGTGGCTTC+CGG 0.363037 2_1:+7823325 Msa0192110:three_prime_UTR
TATAACCGTGTTAGAATCTC+TGG 0.364280 2_1:+7822742 Msa0192110:CDS
GGAGTAGAGACTCGGTTTCT+TGG 0.373699 2_1:-7821668 None:intergenic
AAATGCACCGCGTGTTCAAC+TGG 0.375339 2_1:-7822104 None:intergenic
TTGCTCCTCAGCTCGATGAT+TGG 0.376946 2_1:+7821725 Msa0192110:CDS
TTTATCTTTCTACTCTGTTT+CGG 0.380071 2_1:-7821542 None:intergenic
AAACAGTGCTTGACATTAAT+CGG 0.388805 2_1:-7823789 None:intergenic
CACAAATCATCACTATTATT+GGG 0.392023 2_1:-7823738 None:intergenic
GTTGTTTCTGCTTCCAATGT+TGG 0.394799 2_1:-7821623 None:intergenic
ATGTGTCTGTACACGAATAT+AGG 0.395027 2_1:+7822329 Msa0192110:CDS
TTGAAGAAAATGGAGGAGTT+GGG 0.395461 2_1:+7822272 Msa0192110:CDS
GGTCCTAAGACTATGGGATA+TGG 0.397543 2_1:+7822682 Msa0192110:CDS
ATTTCCGAGTGGACTGATTA+CGG 0.404162 2_1:-7821689 None:intergenic
CTAGAAATCACCCTGTGGTT+TGG 0.404597 2_1:-7823055 None:intergenic
GCTGCTGATTCGTCGGCAAT+TGG 0.411261 2_1:+7823664 Msa0192110:three_prime_UTR
TTTAGCTACAGAATCTGTAT+AGG 0.413382 2_1:+7822416 Msa0192110:CDS
TGTTGAAGATGCAGAAGCTT+TGG 0.416545 2_1:+7823108 Msa0192110:CDS
TAAAGAAGTGGATGGGGTCT+TGG 0.417418 2_1:+7823204 Msa0192110:CDS
TACCCAACGACTACCACATT+TGG 0.419941 2_1:-7822845 None:intergenic
GGACAGCATGAGAAAGTTCC+TGG 0.420846 2_1:+7822350 Msa0192110:CDS
TATGGCTACTGTAGCTAGCT+AGG 0.421635 2_1:-7821566 None:intergenic
AGCATGGCTTCTGCTTTCTC+GGG 0.424331 2_1:-7822884 None:intergenic
TGCACTATAGAACTTGGGTT+TGG 0.424360 2_1:-7823457 None:intergenic
GTTTAGATTTGAATAAGTTA+TGG 0.426744 2_1:+7823808 Msa0192110:three_prime_UTR
CAGTAGCCATAACCATGAAT+TGG 0.430086 2_1:+7821578 Msa0192110:exon
TGGTTGATAAAAGAGTTCTT+AGG 0.432090 2_1:-7823437 None:intergenic
ATCTCTCTTTACGCCCGTCT+TGG 0.443918 2_1:+7822647 Msa0192110:CDS
AACTGCCGTCTGTTTGTATC+CGG 0.448674 2_1:+7823015 Msa0192110:CDS
GGTGAGATGGAGAAAGCATT+GGG 0.450506 2_1:+7822983 Msa0192110:CDS
CTCGATGATTGGGTCTATAA+GGG 0.451427 2_1:+7821736 Msa0192110:CDS
TGATTTCTAGTATATATAGT+TGG 0.456686 2_1:+7823068 Msa0192110:CDS
TAGATTCACACAAGCTCTCC+AGG 0.458468 2_1:+7821816 Msa0192110:CDS
ACAAGGAGAGGGGTAGAGAG+AGG 0.459010 2_1:+7823604 Msa0192110:three_prime_UTR
TCTAGTATATATAGTTGGAT+TGG 0.460561 2_1:+7823073 Msa0192110:CDS
GCCAATTTCTATATAAAAGC+AGG 0.461708 2_1:+7822542 Msa0192110:CDS
TTTGAAGAAAATGGAGGAGT+TGG 0.464572 2_1:+7822271 Msa0192110:CDS
CGAAGCATTGCAACCAACAT+TGG 0.468246 2_1:+7821610 Msa0192110:CDS
CTCAAGGAATGGGAATTCTC+TGG 0.469520 2_1:+7822800 Msa0192110:CDS
CCCGTACATAAGCCTTGAGC+AGG 0.472012 2_1:-7823177 None:intergenic
GATGGTTGCACTATAGAACT+TGG 0.477059 2_1:-7823463 None:intergenic
TAACGATTCTCAGAAAGAAA+TGG 0.478474 2_1:-7821516 None:intergenic
TGCAGCAAGCCCTACAAACC+TGG 0.480088 2_1:+7823534 Msa0192110:three_prime_UTR
TGCATTTGGATCTTGTTGGA+AGG 0.480470 2_1:+7822120 Msa0192110:CDS
AAATTTAATTGCTGGACCAT+TGG 0.481467 2_1:+7823841 Msa0192110:three_prime_UTR
AAAGAGTTCTTAGGTGAGTA+AGG 0.481749 2_1:-7823428 None:intergenic
CTGACAAAATACTCAAGGAA+TGG 0.484280 2_1:+7822789 Msa0192110:CDS
GCGGTGCATTTGGATCTTGT+TGG 0.484855 2_1:+7822116 Msa0192110:CDS
CCCTGCTCAAGGCTTATGTA+CGG 0.485056 2_1:+7823176 Msa0192110:CDS
TGACAAAATACTCAAGGAAT+GGG 0.487616 2_1:+7822790 Msa0192110:CDS
TGAAGAAAATGGAGGAGTTG+GGG 0.495883 2_1:+7822273 Msa0192110:CDS
TGCAAGACTCATTCATGTCT+CGG 0.497078 2_1:+7823350 Msa0192110:three_prime_UTR
CAAGGAGAGGGGTAGAGAGA+GGG 0.497265 2_1:+7823605 Msa0192110:three_prime_UTR
TTCCAAATGTGGTAGTCGTT+GGG 0.500034 2_1:+7822843 Msa0192110:CDS
GCTTCAAGATATATGGAAGA+AGG 0.502780 2_1:+7822904 Msa0192110:CDS
GAGGAAATGTGAGAAGAGGC+TGG 0.505534 2_1:+7822592 Msa0192110:CDS
ATGGCTACTGTAGCTAGCTA+GGG 0.509986 2_1:-7821565 None:intergenic
AACCACACATTGTGATGGAC+TGG 0.512443 2_1:+7822501 Msa0192110:CDS
GCATTTGGATCTTGTTGGAA+GGG 0.514588 2_1:+7822121 Msa0192110:CDS
AGTACACGGATACAAACTCT+TGG 0.516752 2_1:+7822930 Msa0192110:CDS
GGGAGCTGGTAGAGCCGTAC+AGG 0.517075 2_1:-7823718 None:intergenic
GTTCCAAATGTGGTAGTCGT+TGG 0.520404 2_1:+7822842 Msa0192110:CDS
AGGTGAGATGGAGAAAGCAT+TGG 0.529189 2_1:+7822982 Msa0192110:CDS
CTTCCATATATCTTGAAGCA+TGG 0.529618 2_1:-7822900 None:intergenic
TGCAGAGAAGAATTAGACAT+TGG 0.532017 2_1:+7823759 Msa0192110:three_prime_UTR
CGGGCTGATAAAGAAGTGGA+TGG 0.536370 2_1:+7823196 Msa0192110:CDS
GGGCGTAAAGAGAGATAAGA+TGG 0.537631 2_1:-7822640 None:intergenic
TGGTGTGTTTAATGAGATGA+AGG 0.540567 2_1:+7822370 Msa0192110:CDS
TTTCACATTATATTCTTGGG+TGG 0.541233 2_1:+7823318 Msa0192110:three_prime_UTR
CTTCAAGATATATGGAAGAA+GGG 0.541835 2_1:+7822905 Msa0192110:CDS
AGAAATTGTCAACATGAAGA+AGG 0.546543 2_1:+7823270 Msa0192110:CDS
CCTGCTCAAGGCTTATGTAC+GGG 0.548458 2_1:+7823177 Msa0192110:CDS
ATTCTGTAGCTAAAGTTGTC+CGG 0.554644 2_1:-7822407 None:intergenic
TCATCACTATTATTGGGAGC+TGG 0.562053 2_1:-7823732 None:intergenic
ATACTTGCTTAAAGGTGAGA+TGG 0.562401 2_1:+7822970 Msa0192110:CDS
GAACACAATATTGAAAGCGA+TGG 0.566866 2_1:+7822472 Msa0192110:CDS
AAGGAGAGGGGTAGAGAGAG+GGG 0.568054 2_1:+7823606 Msa0192110:three_prime_UTR
TTCGTCGGCAATTGGCATCA+CGG 0.568709 2_1:+7823672 Msa0192110:three_prime_UTR
ATGTGCAGCTGCTGATTCGT+CGG 0.568871 2_1:+7823657 Msa0192110:three_prime_UTR
GGGCTGATAAAGAAGTGGAT+GGG 0.569189 2_1:+7823197 Msa0192110:CDS
ATGGTTGCACTATAGAACTT+GGG 0.569584 2_1:-7823462 None:intergenic
CAATGTTATCTTCTTTCATG+CGG 0.570453 2_1:-7823228 None:intergenic
AGAATCTCTGGTAAAGCTTG+AGG 0.572752 2_1:+7822754 Msa0192110:CDS
TAAAGTTGTCCGGCAAAACA+TGG 0.573693 2_1:-7822397 None:intergenic
GAATGAGGTCCTAAGACTAT+GGG 0.573978 2_1:+7822676 Msa0192110:CDS
AGGCAAACATTTGCTACCAA+TGG 0.575620 2_1:-7823857 None:intergenic
ATCAAACATGAAACAAGGAG+AGG 0.576590 2_1:+7823592 Msa0192110:three_prime_UTR
TCAAACATGAAACAAGGAGA+GGG 0.576671 2_1:+7823593 Msa0192110:three_prime_UTR
AAGAGGCTGGATGACAGAGA+TGG 0.581982 2_1:+7822605 Msa0192110:CDS
GCTGGATGACAGAGATGGAG+AGG 0.585720 2_1:+7822610 Msa0192110:CDS
CATGTATCATTCCCTGCTCA+AGG 0.589258 2_1:+7823165 Msa0192110:CDS
ATTGTCAACATGAAGAAGGA+AGG 0.589842 2_1:+7823274 Msa0192110:CDS
GGTGTGAGGTCAGACATTGA+TGG 0.590788 2_1:+7822446 Msa0192110:CDS
GGCTGATAAAGAAGTGGATG+GGG 0.590962 2_1:+7823198 Msa0192110:CDS
AAGGGCAACAAGGTCAGTGT+TGG 0.593481 2_1:+7821754 Msa0192110:CDS
CATCACGGTCTCAACTCTCA+AGG 0.594521 2_1:+7823687 Msa0192110:three_prime_UTR
TTCATCTCATTAAACACACC+AGG 0.595754 2_1:-7822368 None:intergenic
CTGATTACGGAGTAGAGACT+CGG 0.598422 2_1:-7821676 None:intergenic
GAGTCAACCACACATTGTGA+TGG 0.604951 2_1:+7822496 Msa0192110:CDS
CTCTGAGGAAATGTGAGAAG+AGG 0.609275 2_1:+7822588 Msa0192110:CDS
ACAGTGAGGAGACGGAAGGA+TGG 0.614782 2_1:-7823481 None:intergenic
TGAAGCTGACAAAATACTCA+AGG 0.617626 2_1:+7822784 Msa0192110:CDS
TCTGAGTGGATGAATAAGAA+TGG 0.619392 2_1:+7822065 Msa0192110:CDS
GCAGCTGCACATTGCTACTG+TGG 0.619475 2_1:-7823646 None:intergenic
TACTCCGTAATCAGTCCACT+CGG 0.620238 2_1:+7821685 Msa0192110:CDS
TTGCAAGAGGTGCATAAACA+GGG 0.626280 2_1:+7822715 Msa0192110:CDS
TCAAGGCTATAGCACCTGTA+CGG 0.629965 2_1:+7823704 Msa0192110:three_prime_UTR
TGTACGGGCTGATAAAGAAG+TGG 0.630662 2_1:+7823192 Msa0192110:CDS
TTCCAGTCCATCACAATGTG+TGG 0.631539 2_1:-7822503 None:intergenic
GTATAGGTTCTTATGGTGTG+AGG 0.642898 2_1:+7822432 Msa0192110:CDS
CTGGAACACATATTCTGTCG+TGG 0.646593 2_1:+7822520 Msa0192110:CDS
GAGCTGAGGAGCAACGCTAG+TGG 0.650788 2_1:-7821716 None:intergenic
CTGGATGACAGAGATGGAGA+GGG 0.651199 2_1:+7822611 Msa0192110:CDS
ATGGAAGAAGGGAAAGTACA+CGG 0.654095 2_1:+7822916 Msa0192110:CDS
ATCCCATTTGAAGAAAATGG+AGG 0.656869 2_1:+7822265 Msa0192110:CDS
AAGATGCAGAAGCTTTGGTG+AGG 0.660017 2_1:+7823113 Msa0192110:CDS
TTTCACAGTGAGGAGACGGA+AGG 0.660114 2_1:-7823485 None:intergenic
AAAAGCAGGACTTTCAAGTG+AGG 0.660426 2_1:+7822556 Msa0192110:CDS
CTTTACCAGAGATTCTAACA+CGG 0.660626 2_1:-7822747 None:intergenic
CCGTACATAAGCCTTGAGCA+GGG 0.673451 2_1:-7823176 None:intergenic
GTGAGGCAATTGATGCTCTG+AGG 0.674408 2_1:+7822573 Msa0192110:CDS
CATGAATGAGTCTTGCACAC+CGG 0.675885 2_1:-7823344 None:intergenic
AAAACGGAAGCCAAACCACA+GGG 0.677375 2_1:+7823045 Msa0192110:CDS
CTAGTGGTTTGATTTCCGAG+TGG 0.678702 2_1:-7821700 None:intergenic
TTGGGTCTATAAGGGCAACA+AGG 0.679577 2_1:+7821744 Msa0192110:CDS
TAGACCCAATCATCGAGCTG+AGG 0.680558 2_1:-7821730 None:intergenic
CAAACATGAAACAAGGAGAG+GGG 0.682711 2_1:+7823594 Msa0192110:three_prime_UTR
TTAGTATCAAACATGAAACA+AGG 0.683597 2_1:+7823587 Msa0192110:three_prime_UTR
GTGAGATGGAGAAAGCATTG+GGG 0.709613 2_1:+7822984 Msa0192110:CDS
GAAAGAAATGAGAAGACACA+CGG 0.720582 2_1:+7822194 Msa0192110:CDS
AATGGGTGCAGGTATCTGAG+TGG 0.734932 2_1:+7822051 Msa0192110:intron
ATATACTAGAAATCACCCTG+TGG 0.767120 2_1:-7823060 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAACTTTATTGCTTAATAA+TGG + chr2_1:7822033-7822052 Msa0192110:intron 15.0%
!! TAACTTTATTGCTTAATAAT+GGG + chr2_1:7822034-7822053 Msa0192110:intron 15.0%
!!! ACACTTATTTTAATCTGATT+TGG + chr2_1:7822000-7822019 Msa0192110:intron 20.0%
!!! TGATTTCTAGTATATATAGT+TGG + chr2_1:7823068-7823087 Msa0192110:CDS 20.0%
!!! ATGAAAAAGTCATTAATTTG+AGG - chr2_1:7823394-7823413 None:intergenic 20.0%
!!! TCAAATTAATGACTTTTTCA+TGG + chr2_1:7823393-7823412 Msa0192110:three_prime_UTR 20.0%
!! GTTTAGATTTGAATAAGTTA+TGG + chr2_1:7823808-7823827 Msa0192110:three_prime_UTR 20.0%
! TTTATCTTTCTACTCTGTTT+CGG - chr2_1:7821545-7821564 None:intergenic 25.0%
! AATAAGAGAAATTGAAAACC+TGG - chr2_1:7821837-7821856 None:intergenic 25.0%
!!! AACCTATTTTAATAGCTTGA+AGG + chr2_1:7822166-7822185 Msa0192110:CDS 25.0%
! ATCCTTCAAGCTATTAAAAT+AGG - chr2_1:7822171-7822190 None:intergenic 25.0%
!!! TCCTGCTTTTATATAGAAAT+TGG - chr2_1:7822546-7822565 None:intergenic 25.0%
! TGTATCCGGAAAATAAAAAA+CGG + chr2_1:7823029-7823048 Msa0192110:CDS 25.0%
! TCTAGTATATATAGTTGGAT+TGG + chr2_1:7823073-7823092 Msa0192110:CDS 25.0%
! TCTGTTTCACATTATATTCT+TGG + chr2_1:7823314-7823333 Msa0192110:three_prime_UTR 25.0%
! CTGTTTCACATTATATTCTT+GGG + chr2_1:7823315-7823334 Msa0192110:three_prime_UTR 25.0%
!! ATAAATGTATTTTCACAGTG+AGG - chr2_1:7823498-7823517 None:intergenic 25.0%
!!! TTTAATTTTCCAGGTTTGTA+GGG - chr2_1:7823546-7823565 None:intergenic 25.0%
! TTAGTATCAAACATGAAACA+AGG + chr2_1:7823587-7823606 Msa0192110:three_prime_UTR 25.0%
! CACAAATCATCACTATTATT+GGG - chr2_1:7823741-7823760 None:intergenic 25.0%
TAACGATTCTCAGAAAGAAA+TGG - chr2_1:7821519-7821538 None:intergenic 30.0%
TCTATCCCATTTGAAGAAAA+TGG + chr2_1:7822262-7822281 Msa0192110:CDS 30.0%
TTTAGCTACAGAATCTGTAT+AGG + chr2_1:7822416-7822435 Msa0192110:CDS 30.0%
AGAATCTGTATAGGTTCTTA+TGG + chr2_1:7822425-7822444 Msa0192110:CDS 30.0%
GCCAATTTCTATATAAAAGC+AGG + chr2_1:7822542-7822561 Msa0192110:CDS 30.0%
TGACAAAATACTCAAGGAAT+GGG + chr2_1:7822790-7822809 Msa0192110:CDS 30.0%
! TCTGGTAACTGTTATGATTT+TGG + chr2_1:7822818-7822837 Msa0192110:CDS 30.0%
CTTCAAGATATATGGAAGAA+GGG + chr2_1:7822905-7822924 Msa0192110:CDS 30.0%
! GATACATGTGTCTATTCTTT+TGG - chr2_1:7823153-7823172 None:intergenic 30.0%
CAATGTTATCTTCTTTCATG+CGG - chr2_1:7823231-7823250 None:intergenic 30.0%
AGAAATTGTCAACATGAAGA+AGG + chr2_1:7823270-7823289 Msa0192110:CDS 30.0%
TTTCACATTATATTCTTGGG+TGG + chr2_1:7823318-7823337 Msa0192110:three_prime_UTR 30.0%
!! TGGTTGATAAAAGAGTTCTT+AGG - chr2_1:7823440-7823459 None:intergenic 30.0%
!! CTTTAATTTTCCAGGTTTGT+AGG - chr2_1:7823547-7823566 None:intergenic 30.0%
!!! TTTTGTCGCTTTAATTTTCC+AGG - chr2_1:7823555-7823574 None:intergenic 30.0%
GGAAAATTAAAGCGACAAAA+AGG + chr2_1:7823555-7823574 Msa0192110:three_prime_UTR 30.0%
GCACAAATCATCACTATTAT+TGG - chr2_1:7823742-7823761 None:intergenic 30.0%
AAACAGTGCTTGACATTAAT+CGG - chr2_1:7823792-7823811 None:intergenic 30.0%
GTTTCCCTAAATTTAATTGC+TGG + chr2_1:7823833-7823852 Msa0192110:three_prime_UTR 30.0%
TGGTCCAGCAATTAAATTTA+GGG - chr2_1:7823840-7823859 None:intergenic 30.0%
ATGGTCCAGCAATTAAATTT+AGG - chr2_1:7823841-7823860 None:intergenic 30.0%
AAATTTAATTGCTGGACCAT+TGG + chr2_1:7823841-7823860 Msa0192110:three_prime_UTR 30.0%
! GAACAAGAGTTTTTATTGTG+AGG - chr2_1:7823880-7823899 None:intergenic 30.0%
!!! TGAACGAGACTTTTAAGATT+TGG - chr2_1:7823924-7823943 None:intergenic 30.0%
! GGATACTTTTACTGAATGTT+TGG - chr2_1:7823955-7823974 None:intergenic 30.0%
AAGCTTCCAATTCATGGTTA+TGG - chr2_1:7821587-7821606 None:intergenic 35.0%
!! AAAGCGCTGATGTTATAAGT+TGG + chr2_1:7821941-7821960 Msa0192110:intron 35.0%
!! AAGCGCTGATGTTATAAGTT+GGG + chr2_1:7821942-7821961 Msa0192110:intron 35.0%
!! TATTGCTTAATAATGGGTGC+AGG + chr2_1:7822040-7822059 Msa0192110:intron 35.0%
TCTGAGTGGATGAATAAGAA+TGG + chr2_1:7822065-7822084 Msa0192110:CDS 35.0%
GAAAGAAATGAGAAGACACA+CGG + chr2_1:7822194-7822213 Msa0192110:CDS 35.0%
ATCCCATTTGAAGAAAATGG+AGG + chr2_1:7822265-7822284 Msa0192110:CDS 35.0%
! CTCCTCCATTTTCTTCAAAT+GGG - chr2_1:7822270-7822289 None:intergenic 35.0%
! ACTCCTCCATTTTCTTCAAA+TGG - chr2_1:7822271-7822290 None:intergenic 35.0%
TTTGAAGAAAATGGAGGAGT+TGG + chr2_1:7822271-7822290 Msa0192110:CDS 35.0%
TTGAAGAAAATGGAGGAGTT+GGG + chr2_1:7822272-7822291 Msa0192110:CDS 35.0%
ATGTGTCTGTACACGAATAT+AGG + chr2_1:7822329-7822348 Msa0192110:CDS 35.0%
TTCATCTCATTAAACACACC+AGG - chr2_1:7822371-7822390 None:intergenic 35.0%
TGGTGTGTTTAATGAGATGA+AGG + chr2_1:7822370-7822389 Msa0192110:CDS 35.0%
ATTCTGTAGCTAAAGTTGTC+CGG - chr2_1:7822410-7822429 None:intergenic 35.0%
GAACACAATATTGAAAGCGA+TGG + chr2_1:7822472-7822491 Msa0192110:CDS 35.0%
!!! CTCATTCTTTTTTCCAAGAC+GGG - chr2_1:7822663-7822682 None:intergenic 35.0%
!!! CCTCATTCTTTTTTCCAAGA+CGG - chr2_1:7822664-7822683 None:intergenic 35.0%
TTTCCATATCCCATAGTCTT+AGG - chr2_1:7822688-7822707 None:intergenic 35.0%
TATAACCGTGTTAGAATCTC+TGG + chr2_1:7822742-7822761 Msa0192110:CDS 35.0%
CTTTACCAGAGATTCTAACA+CGG - chr2_1:7822750-7822769 None:intergenic 35.0%
TGAAGCTGACAAAATACTCA+AGG + chr2_1:7822784-7822803 Msa0192110:CDS 35.0%
CTGACAAAATACTCAAGGAA+TGG + chr2_1:7822789-7822808 Msa0192110:CDS 35.0%
!!! TGATTTTGGAGTTCCAAATG+TGG + chr2_1:7822832-7822851 Msa0192110:CDS 35.0%
AAGCCATGCTTCAAGATATA+TGG + chr2_1:7822897-7822916 Msa0192110:CDS 35.0%
CTTCCATATATCTTGAAGCA+TGG - chr2_1:7822903-7822922 None:intergenic 35.0%
GCTTCAAGATATATGGAAGA+AGG + chr2_1:7822904-7822923 Msa0192110:CDS 35.0%
ATACTTGCTTAAAGGTGAGA+TGG + chr2_1:7822970-7822989 Msa0192110:CDS 35.0%
! ATTTTCCGGATACAAACAGA+CGG - chr2_1:7823023-7823042 None:intergenic 35.0%
!!! GGCTTCCGTTTTTTATTTTC+CGG - chr2_1:7823037-7823056 None:intergenic 35.0%
ATATACTAGAAATCACCCTG+TGG - chr2_1:7823063-7823082 None:intergenic 35.0%
GAAGATAACATTGACGAAAC+TGG + chr2_1:7823238-7823257 Msa0192110:CDS 35.0%
ATTGTCAACATGAAGAAGGA+AGG + chr2_1:7823274-7823293 Msa0192110:CDS 35.0%
AAAGAGTTCTTAGGTGAGTA+AGG - chr2_1:7823431-7823450 None:intergenic 35.0%
ATGGTTGCACTATAGAACTT+GGG - chr2_1:7823465-7823484 None:intergenic 35.0%
ATCAAACATGAAACAAGGAG+AGG + chr2_1:7823592-7823611 Msa0192110:three_prime_UTR 35.0%
TCAAACATGAAACAAGGAGA+GGG + chr2_1:7823593-7823612 Msa0192110:three_prime_UTR 35.0%
TGCAGAGAAGAATTAGACAT+TGG + chr2_1:7823759-7823778 Msa0192110:three_prime_UTR 35.0%
CAGTAGCCATAACCATGAAT+TGG + chr2_1:7821578-7821597 Msa0192110:exon 40.0%
TCGAAGAAGCTTCCAATTCA+TGG - chr2_1:7821593-7821612 None:intergenic 40.0%
!! GTTGTTTCTGCTTCCAATGT+TGG - chr2_1:7821626-7821645 None:intergenic 40.0%
!! ATTTCCGAGTGGACTGATTA+CGG - chr2_1:7821692-7821711 None:intergenic 40.0%
CTCGATGATTGGGTCTATAA+GGG + chr2_1:7821736-7821755 Msa0192110:CDS 40.0%
! ATTTTCTCCAGTTGAACACG+CGG + chr2_1:7822097-7822116 Msa0192110:CDS 40.0%
TGCATTTGGATCTTGTTGGA+AGG + chr2_1:7822120-7822139 Msa0192110:CDS 40.0%
GCATTTGGATCTTGTTGGAA+GGG + chr2_1:7822121-7822140 Msa0192110:CDS 40.0%
TGAAGAAAATGGAGGAGTTG+GGG + chr2_1:7822273-7822292 Msa0192110:CDS 40.0%
! GAAGGAAAACCATGTTTTGC+CGG + chr2_1:7822388-7822407 Msa0192110:CDS 40.0%
TAAAGTTGTCCGGCAAAACA+TGG - chr2_1:7822400-7822419 None:intergenic 40.0%
GTATAGGTTCTTATGGTGTG+AGG + chr2_1:7822432-7822451 Msa0192110:CDS 40.0%
! AAAAGCAGGACTTTCAAGTG+AGG + chr2_1:7822556-7822575 Msa0192110:CDS 40.0%
CCGTCTTGGAAAAAAGAATG+AGG + chr2_1:7822661-7822680 Msa0192110:CDS 40.0%
AGAATGAGGTCCTAAGACTA+TGG + chr2_1:7822675-7822694 Msa0192110:CDS 40.0%
GAATGAGGTCCTAAGACTAT+GGG + chr2_1:7822676-7822695 Msa0192110:CDS 40.0%
!! TGGAAAAAAGTGCTTGCAAG+AGG + chr2_1:7822702-7822721 Msa0192110:CDS 40.0%
! TTGCAAGAGGTGCATAAACA+GGG + chr2_1:7822715-7822734 Msa0192110:CDS 40.0%
AGAATCTCTGGTAAAGCTTG+AGG + chr2_1:7822754-7822773 Msa0192110:CDS 40.0%
TTCCAAATGTGGTAGTCGTT+GGG + chr2_1:7822843-7822862 Msa0192110:CDS 40.0%
! ATGGAAGAAGGGAAAGTACA+CGG + chr2_1:7822916-7822935 Msa0192110:CDS 40.0%
AGTACACGGATACAAACTCT+TGG + chr2_1:7822930-7822949 Msa0192110:CDS 40.0%
GCAGATCGATACTTGCTTAA+AGG + chr2_1:7822962-7822981 Msa0192110:CDS 40.0%
TGTTGAAGATGCAGAAGCTT+TGG + chr2_1:7823108-7823127 Msa0192110:CDS 40.0%
TTATATTCTTGGGTGGCTTC+CGG + chr2_1:7823325-7823344 Msa0192110:three_prime_UTR 40.0%
TGCAAGACTCATTCATGTCT+CGG + chr2_1:7823350-7823369 Msa0192110:three_prime_UTR 40.0%
TGCACTATAGAACTTGGGTT+TGG - chr2_1:7823460-7823479 None:intergenic 40.0%
GATGGTTGCACTATAGAACT+TGG - chr2_1:7823466-7823485 None:intergenic 40.0%
! GTATTTTCACAGTGAGGAGA+CGG - chr2_1:7823492-7823511 None:intergenic 40.0%
TTAAAGCGACAAAAAGGCAG+AGG + chr2_1:7823561-7823580 Msa0192110:three_prime_UTR 40.0%
CAAACATGAAACAAGGAGAG+GGG + chr2_1:7823594-7823613 Msa0192110:three_prime_UTR 40.0%
TCATCACTATTATTGGGAGC+TGG - chr2_1:7823735-7823754 None:intergenic 40.0%
! AGGCAAACATTTGCTACCAA+TGG - chr2_1:7823860-7823879 None:intergenic 40.0%
ATGGCTACTGTAGCTAGCTA+GGG - chr2_1:7821568-7821587 None:intergenic 45.0%
TATGGCTACTGTAGCTAGCT+AGG - chr2_1:7821569-7821588 None:intergenic 45.0%
!! CGAAGCATTGCAACCAACAT+TGG + chr2_1:7821610-7821629 Msa0192110:CDS 45.0%
CTGATTACGGAGTAGAGACT+CGG - chr2_1:7821679-7821698 None:intergenic 45.0%
TACTCCGTAATCAGTCCACT+CGG + chr2_1:7821685-7821704 Msa0192110:CDS 45.0%
! CTAGTGGTTTGATTTCCGAG+TGG - chr2_1:7821703-7821722 None:intergenic 45.0%
GCTCGATGATTGGGTCTATA+AGG + chr2_1:7821735-7821754 Msa0192110:CDS 45.0%
TTGGGTCTATAAGGGCAACA+AGG + chr2_1:7821744-7821763 Msa0192110:CDS 45.0%
TAGATTCACACAAGCTCTCC+AGG + chr2_1:7821816-7821835 Msa0192110:CDS 45.0%
GATCTTGTTGGAAGGGTTCA+TGG + chr2_1:7822128-7822147 Msa0192110:CDS 45.0%
GAGTCAACCACACATTGTGA+TGG + chr2_1:7822496-7822515 Msa0192110:CDS 45.0%
!! AACCACACATTGTGATGGAC+TGG + chr2_1:7822501-7822520 Msa0192110:CDS 45.0%
TTCCAGTCCATCACAATGTG+TGG - chr2_1:7822506-7822525 None:intergenic 45.0%
CTGGAACACATATTCTGTCG+TGG + chr2_1:7822520-7822539 Msa0192110:CDS 45.0%
! CTCTGAGGAAATGTGAGAAG+AGG + chr2_1:7822588-7822607 Msa0192110:CDS 45.0%
GGGCGTAAAGAGAGATAAGA+TGG - chr2_1:7822643-7822662 None:intergenic 45.0%
GGTCCTAAGACTATGGGATA+TGG + chr2_1:7822682-7822701 Msa0192110:CDS 45.0%
! CTTGCAAGAGGTGCATAAAC+AGG + chr2_1:7822714-7822733 Msa0192110:CDS 45.0%
CTCAAGGAATGGGAATTCTC+TGG + chr2_1:7822800-7822819 Msa0192110:CDS 45.0%
GTTCCAAATGTGGTAGTCGT+TGG + chr2_1:7822842-7822861 Msa0192110:CDS 45.0%
TACCCAACGACTACCACATT+TGG - chr2_1:7822848-7822867 None:intergenic 45.0%
AAGCATGGCTTCTGCTTTCT+CGG - chr2_1:7822888-7822907 None:intergenic 45.0%
! AGGTGAGATGGAGAAAGCAT+TGG + chr2_1:7822982-7823001 Msa0192110:CDS 45.0%
!! GGTGAGATGGAGAAAGCATT+GGG + chr2_1:7822983-7823002 Msa0192110:CDS 45.0%
!! GTGAGATGGAGAAAGCATTG+GGG + chr2_1:7822984-7823003 Msa0192110:CDS 45.0%
AACTGCCGTCTGTTTGTATC+CGG + chr2_1:7823015-7823034 Msa0192110:CDS 45.0%
AAAAACGGAAGCCAAACCAC+AGG + chr2_1:7823044-7823063 Msa0192110:CDS 45.0%
AAAACGGAAGCCAAACCACA+GGG + chr2_1:7823045-7823064 Msa0192110:CDS 45.0%
CTAGAAATCACCCTGTGGTT+TGG - chr2_1:7823058-7823077 None:intergenic 45.0%
! AAGATGCAGAAGCTTTGGTG+AGG + chr2_1:7823113-7823132 Msa0192110:CDS 45.0%
CATGTATCATTCCCTGCTCA+AGG + chr2_1:7823165-7823184 Msa0192110:CDS 45.0%
! TGTACGGGCTGATAAAGAAG+TGG + chr2_1:7823192-7823211 Msa0192110:CDS 45.0%
GGGCTGATAAAGAAGTGGAT+GGG + chr2_1:7823197-7823216 Msa0192110:CDS 45.0%
GGCTGATAAAGAAGTGGATG+GGG + chr2_1:7823198-7823217 Msa0192110:CDS 45.0%
TAAAGAAGTGGATGGGGTCT+TGG + chr2_1:7823204-7823223 Msa0192110:CDS 45.0%
CATGAATGAGTCTTGCACAC+CGG - chr2_1:7823347-7823366 None:intergenic 45.0%
TCAAGGCTATAGCACCTGTA+CGG + chr2_1:7823704-7823723 Msa0192110:three_prime_UTR 45.0%
!! ACTCGGTTTCTTGGTCTTGC+TGG - chr2_1:7821662-7821681 None:intergenic 50.0%
! GGAGTAGAGACTCGGTTTCT+TGG - chr2_1:7821671-7821690 None:intergenic 50.0%
TTGCTCCTCAGCTCGATGAT+TGG + chr2_1:7821725-7821744 Msa0192110:CDS 50.0%
TGCTCCTCAGCTCGATGATT+GGG + chr2_1:7821726-7821745 Msa0192110:CDS 50.0%
TAGACCCAATCATCGAGCTG+AGG - chr2_1:7821733-7821752 None:intergenic 50.0%
AAGGGCAACAAGGTCAGTGT+TGG + chr2_1:7821754-7821773 Msa0192110:CDS 50.0%
AATGGGTGCAGGTATCTGAG+TGG + chr2_1:7822051-7822070 Msa0192110:intron 50.0%
AAATGCACCGCGTGTTCAAC+TGG - chr2_1:7822107-7822126 None:intergenic 50.0%
AGTTGAACACGCGGTGCATT+TGG + chr2_1:7822106-7822125 Msa0192110:CDS 50.0%
GCGGTGCATTTGGATCTTGT+TGG + chr2_1:7822116-7822135 Msa0192110:CDS 50.0%
GGACAGCATGAGAAAGTTCC+TGG + chr2_1:7822350-7822369 Msa0192110:CDS 50.0%
GGTGTGAGGTCAGACATTGA+TGG + chr2_1:7822446-7822465 Msa0192110:CDS 50.0%
GTGAGGCAATTGATGCTCTG+AGG + chr2_1:7822573-7822592 Msa0192110:CDS 50.0%
GAGGAAATGTGAGAAGAGGC+TGG + chr2_1:7822592-7822611 Msa0192110:CDS 50.0%
AAGAGGCTGGATGACAGAGA+TGG + chr2_1:7822605-7822624 Msa0192110:CDS 50.0%
CTGGATGACAGAGATGGAGA+GGG + chr2_1:7822611-7822630 Msa0192110:CDS 50.0%
ATCTCTCTTTACGCCCGTCT+TGG + chr2_1:7822647-7822666 Msa0192110:CDS 50.0%
AGCATGGCTTCTGCTTTCTC+GGG - chr2_1:7822887-7822906 None:intergenic 50.0%
CCGTACATAAGCCTTGAGCA+GGG - chr2_1:7823179-7823198 None:intergenic 50.0%
CCCTGCTCAAGGCTTATGTA+CGG + chr2_1:7823176-7823195 Msa0192110:CDS 50.0%
CCTGCTCAAGGCTTATGTAC+GGG + chr2_1:7823177-7823196 Msa0192110:CDS 50.0%
CGGGCTGATAAAGAAGTGGA+TGG + chr2_1:7823196-7823215 Msa0192110:CDS 50.0%
TTTCACAGTGAGGAGACGGA+AGG - chr2_1:7823488-7823507 None:intergenic 50.0%
!! ATGTGCAGCTGCTGATTCGT+CGG + chr2_1:7823657-7823676 Msa0192110:three_prime_UTR 50.0%
TTCGTCGGCAATTGGCATCA+CGG + chr2_1:7823672-7823691 Msa0192110:three_prime_UTR 50.0%
CATCACGGTCTCAACTCTCA+AGG + chr2_1:7823687-7823706 Msa0192110:three_prime_UTR 50.0%
GCTGGATGACAGAGATGGAG+AGG + chr2_1:7822610-7822629 Msa0192110:CDS 55.0%
CCCGTACATAAGCCTTGAGC+AGG - chr2_1:7823180-7823199 None:intergenic 55.0%
ACAGTGAGGAGACGGAAGGA+TGG - chr2_1:7823484-7823503 None:intergenic 55.0%
TGCAGCAAGCCCTACAAACC+TGG + chr2_1:7823534-7823553 Msa0192110:three_prime_UTR 55.0%
ACAAGGAGAGGGGTAGAGAG+AGG + chr2_1:7823604-7823623 Msa0192110:three_prime_UTR 55.0%
CAAGGAGAGGGGTAGAGAGA+GGG + chr2_1:7823605-7823624 Msa0192110:three_prime_UTR 55.0%
AAGGAGAGGGGTAGAGAGAG+GGG + chr2_1:7823606-7823625 Msa0192110:three_prime_UTR 55.0%
GCAGCTGCACATTGCTACTG+TGG - chr2_1:7823649-7823668 None:intergenic 55.0%
!! GCTGCTGATTCGTCGGCAAT+TGG + chr2_1:7823664-7823683 Msa0192110:three_prime_UTR 55.0%
GAGCTGAGGAGCAACGCTAG+TGG - chr2_1:7821719-7821738 None:intergenic 60.0%
GGGAGCTGGTAGAGCCGTAC+AGG - chr2_1:7823721-7823740 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 7821508 7823984 7821508 ID=Msa0192110;Name=Msa0192110
chr2_1 mRNA 7821508 7823984 7821508 ID=Msa0192110-mRNA-1;Parent=Msa0192110;Name=Msa0192110-mRNA-1;_AED=0.00;_eAED=0.00;_QI=84|1|1|1|1|1|2|678|496
chr2_1 exon 7821508 7821837 7821508 ID=Msa0192110-mRNA-1:exon:3593;Parent=Msa0192110-mRNA-1
chr2_1 exon 7822062 7823984 7822062 ID=Msa0192110-mRNA-1:exon:3594;Parent=Msa0192110-mRNA-1
chr2_1 five_prime_UTR 7821508 7821591 7821508 ID=Msa0192110-mRNA-1:five_prime_utr;Parent=Msa0192110-mRNA-1
chr2_1 CDS 7821592 7821837 7821592 ID=Msa0192110-mRNA-1:cds;Parent=Msa0192110-mRNA-1
chr2_1 CDS 7822062 7823306 7822062 ID=Msa0192110-mRNA-1:cds;Parent=Msa0192110-mRNA-1
chr2_1 three_prime_UTR 7823307 7823984 7823307 ID=Msa0192110-mRNA-1:three_prime_utr;Parent=Msa0192110-mRNA-1
Gene Sequence

>Msa0192110

ATGAATTGGAAGCTTCTTCGAAGCATTGCAACCAACATTGGAAGCAGAAACAACAGATCATACTACACCAGCAAGACCAAGAAACCGAGTCTCTACTCCGTAATCAGTCCACTCGGAAATCAAACCACTAGCGTTGCTCCTCAGCTCGATGATTGGGTCTATAAGGGCAACAAGGTCAGTGTTGGTGAGCTTCAGCGCATTGTTCGTGATCTTCGCAAGCGTAGTAGATTCACACAAGCTCTCCAGGTATCTGAGTGGATGAATAAGAATGGTGTGTGCATATTTTCTCCAGTTGAACACGCGGTGCATTTGGATCTTGTTGGAAGGGTTCATGGTTTTCATGCTGCAGAAACCTATTTTAATAGCTTGAAGGATATAGAAAGAAATGAGAAGACACACGGTGCTCTTTTGAATTGCTATGTACGTCAGCGTCAAGTCGATAAGTCTCTATCCCATTTGAAGAAAATGGAGGAGTTGGGGTTTGCTTTGTCGTCTCTAACTTATAACAACATTATGTGTCTGTACACGAATATAGGACAGCATGAGAAAGTTCCTGGTGTGTTTAATGAGATGAAGGAAAACCATGTTTTGCCGGACAACTTTAGCTACAGAATCTGTATAGGTTCTTATGGTGTGAGGTCAGACATTGATGGAATGAACACAATATTGAAAGCGATGGAGAGTCAACCACACATTGTGATGGACTGGAACACATATTCTGTCGTGGCCAATTTCTATATAAAAGCAGGACTTTCAAGTGAGGCAATTGATGCTCTGAGGAAATGTGAGAAGAGGCTGGATGACAGAGATGGAGAGGGTTACAACCATCTTATCTCTCTTTACGCCCGTCTTGGAAAAAAGAATGAGGTCCTAAGACTATGGGATATGGAAAAAAGTGCTTGCAAGAGGTGCATAAACAGGGATTTTATAACCGTGTTAGAATCTCTGGTAAAGCTTGAGGAGTTTGATGAAGCTGACAAAATACTCAAGGAATGGGAATTCTCTGGTAACTGTTATGATTTTGGAGTTCCAAATGTGGTAGTCGTTGGGTACTCTGAAAAAGATTTTCCCGAGAAAGCAGAAGCCATGCTTCAAGATATATGGAAGAAGGGAAAGTACACGGATACAAACTCTTGGATTCTAGTCGCAGATCGATACTTGCTTAAAGGTGAGATGGAGAAAGCATTGGGGTGCTTGAAAACTGCCGTCTGTTTGTATCCGGAAAATAAAAAACGGAAGCCAAACCACAGGGTGATTTCTAGTATATATAGTTGGATTGGTGATAATGCTTCTGTTGAAGATGCAGAAGCTTTGGTGAGGTTATTGAAAAAATTCCAAAAGAATAGACACATGTATCATTCCCTGCTCAAGGCTTATGTACGGGCTGATAAAGAAGTGGATGGGGTCTTGGACCGCATGAAAGAAGATAACATTGACGAAACTGGAAAAACTGCAGAAATTGTCAACATGAAGAAGGAAGGAAATTTGTAA
Protein sequence

>Msa0192110

MNWKLLRSIATNIGSRNNRSYYTSKTKKPSLYSVISPLGNQTTSVAPQLDDWVYKGNKVSVGELQRIVRDLRKRSRFTQALQVSEWMNKNGVCIFSPVEHAVHLDLVGRVHGFHAAETYFNSLKDIERNEKTHGALLNCYVRQRQVDKSLSHLKKMEELGFALSSLTYNNIMCLYTNIGQHEKVPGVFNEMKENHVLPDNFSYRICIGSYGVRSDIDGMNTILKAMESQPHIVMDWNTYSVVANFYIKAGLSSEAIDALRKCEKRLDDRDGEGYNHLISLYARLGKKNEVLRLWDMEKSACKRCINRDFITVLESLVKLEEFDEADKILKEWEFSGNCYDFGVPNVVVVGYSEKDFPEKAEAMLQDIWKKGKYTDTNSWILVADRYLLKGEMEKALGCLKTAVCLYPENKKRKPNHRVISSIYSWIGDNASVEDAEALVRLLKKFQKNRHMYHSLLKAYVRADKEVDGVLDRMKEDNIDETGKTAEIVNMKKEGNL*