Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0261550 | XP_013465029.1 | 97.701 | 87 | 2 | 0 | 1 | 87 | 1 | 87 | 5.78e-57 | 180 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0261550 | A0A072VAJ9 | 97.701 | 87 | 2 | 0 | 1 | 87 | 1 | 87 | 2.76e-57 | 180 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001450 | Msa0261550 | 0.826678 | 2.378243e-54 | -8.615850e-47 |
| Msa0015390 | Msa0261550 | 0.809063 | 2.277425e-50 | -8.615850e-47 |
| Msa0018070 | Msa0261550 | 0.810431 | 1.156441e-50 | -8.615850e-47 |
| Msa0020390 | Msa0261550 | 0.829026 | 6.481056e-55 | -8.615850e-47 |
| Msa0020410 | Msa0261550 | 0.807042 | 6.132387e-50 | -8.615850e-47 |
| Msa0023000 | Msa0261550 | 0.827193 | 1.790616e-54 | -8.615850e-47 |
| Msa0027260 | Msa0261550 | 0.813500 | 2.480019e-51 | -8.615850e-47 |
| Msa0033110 | Msa0261550 | 0.818392 | 2.007395e-52 | -8.615850e-47 |
| Msa0033260 | Msa0261550 | 0.814805 | 1.277795e-51 | -8.615850e-47 |
| Msa0035150 | Msa0261550 | 0.808645 | 2.798019e-50 | -8.615850e-47 |
| Msa0037880 | Msa0261550 | 0.810555 | 1.087555e-50 | -8.615850e-47 |
| Msa0044000 | Msa0261550 | 0.857239 | 1.868725e-62 | -8.615850e-47 |
| Msa0065950 | Msa0261550 | 0.814967 | 1.176424e-51 | -8.615850e-47 |
| Msa0086420 | Msa0261550 | 0.801812 | 7.547743e-49 | -8.615850e-47 |
| Msa0090570 | Msa0261550 | 0.837994 | 3.741532e-57 | -8.615850e-47 |
| Msa0091410 | Msa0261550 | 0.813883 | 2.042403e-51 | -8.615850e-47 |
| Msa0096980 | Msa0261550 | 0.810359 | 1.198599e-50 | -8.615850e-47 |
| Msa0115270 | Msa0261550 | 0.813008 | 3.180944e-51 | -8.615850e-47 |
| Msa0118540 | Msa0261550 | 0.815519 | 8.870351e-52 | -8.615850e-47 |
| Msa0118780 | Msa0261550 | 0.803975 | 2.696318e-49 | -8.615850e-47 |
| Msa0121870 | Msa0261550 | 0.836273 | 1.030540e-56 | -8.615850e-47 |
| Msa0127800 | Msa0261550 | 0.845820 | 3.199306e-59 | -8.615850e-47 |
| Msa0139670 | Msa0261550 | 0.804623 | 1.976630e-49 | -8.615850e-47 |
| Msa0140110 | Msa0261550 | 0.815837 | 7.534657e-52 | -8.615850e-47 |
| Msa0145010 | Msa0261550 | 0.807523 | 4.847887e-50 | -8.615850e-47 |
| Msa0162130 | Msa0261550 | 0.801705 | 7.936601e-49 | -8.615850e-47 |
| Msa0167980 | Msa0261550 | 0.801167 | 1.023010e-48 | -8.615850e-47 |
| Msa0171540 | Msa0261550 | 0.806218 | 9.150485e-50 | -8.615850e-47 |
| Msa0183850 | Msa0261550 | 0.825508 | 4.512125e-54 | -8.615850e-47 |
| Msa0189520 | Msa0261550 | 0.837882 | 3.998930e-57 | -8.615850e-47 |
| Msa0190120 | Msa0261550 | 0.820429 | 6.892193e-53 | -8.615850e-47 |
| Msa0190250 | Msa0261550 | 0.805366 | 1.381945e-49 | -8.615850e-47 |
| Msa0192110 | Msa0261550 | 0.815597 | 8.520106e-52 | -8.615850e-47 |
| Msa0204960 | Msa0261550 | 0.835468 | 1.648732e-56 | -8.615850e-47 |
| Msa0206690 | Msa0261550 | 0.824644 | 7.216938e-54 | -8.615850e-47 |
| Msa0207670 | Msa0261550 | 0.828915 | 6.895438e-55 | -8.615850e-47 |
| Msa0209350 | Msa0261550 | 0.819219 | 1.302951e-52 | -8.615850e-47 |
| Msa0214550 | Msa0261550 | 0.813907 | 2.018123e-51 | -8.615850e-47 |
| Msa0220240 | Msa0261550 | 0.825701 | 4.060839e-54 | -8.615850e-47 |
| Msa0220250 | Msa0261550 | 0.883157 | 5.690193e-71 | -8.615850e-47 |
| Msa0228070 | Msa0261550 | 0.801653 | 8.133462e-49 | -8.615850e-47 |
| Msa0229380 | Msa0261550 | 0.802116 | 6.536542e-49 | -8.615850e-47 |
| Msa0231790 | Msa0261550 | 0.820548 | 6.471428e-53 | -8.615850e-47 |
| Msa0231980 | Msa0261550 | 0.802068 | 6.685584e-49 | -8.615850e-47 |
| Msa0232050 | Msa0261550 | 0.810768 | 9.779272e-51 | -8.615850e-47 |
| Msa0236510 | Msa0261550 | -0.800477 | 1.415237e-48 | -8.615850e-47 |
| Msa0249580 | Msa0261550 | 0.802029 | 6.809544e-49 | -8.615850e-47 |
| Msa0256330 | Msa0261550 | 0.813905 | 2.019761e-51 | -8.615850e-47 |
| Msa0257490 | Msa0261550 | 0.830387 | 3.022843e-55 | -8.615850e-47 |
| Msa0259210 | Msa0261550 | 0.825530 | 4.457868e-54 | -8.615850e-47 |
| Msa0261550 | Msa0271360 | 0.805445 | 1.330694e-49 | -8.615850e-47 |
| Msa0261550 | Msa0271770 | 0.810690 | 1.016748e-50 | -8.615850e-47 |
| Msa0261550 | Msa0271890 | 0.844685 | 6.488564e-59 | -8.615850e-47 |
| Msa0261550 | Msa0281530 | 0.852249 | 5.226336e-61 | -8.615850e-47 |
| Msa0261550 | Msa0292030 | 0.802504 | 5.435879e-49 | -8.615850e-47 |
| Msa0261550 | Msa0295330 | 0.819681 | 1.022427e-52 | -8.615850e-47 |
| Msa0261550 | Msa0296790 | 0.821646 | 3.614889e-53 | -8.615850e-47 |
| Msa0261550 | Msa0298700 | 0.808910 | 2.455825e-50 | -8.615850e-47 |
| Msa0261550 | Msa0304510 | 0.844125 | 9.174601e-59 | -8.615850e-47 |
| Msa0261550 | Msa0305030 | 0.835531 | 1.589694e-56 | -8.615850e-47 |
| Msa0261550 | Msa0306210 | -0.811612 | 6.415580e-51 | -8.615850e-47 |
| Msa0261550 | Msa0310860 | 0.846033 | 2.800686e-59 | -8.615850e-47 |
| Msa0261550 | Msa0319170 | 0.800590 | 1.341851e-48 | -8.615850e-47 |
| Msa0261550 | Msa0320590 | 0.819552 | 1.093890e-52 | -8.615850e-47 |
| Msa0261550 | Msa0326480 | 0.811606 | 6.435843e-51 | -8.615850e-47 |
| Msa0261550 | Msa0335060 | 0.827628 | 1.408839e-54 | -8.615850e-47 |
| Msa0261550 | Msa0336320 | 0.817115 | 3.897949e-52 | -8.615850e-47 |
| Msa0261550 | Msa0343850 | 0.881982 | 1.525402e-70 | -8.615850e-47 |
| Msa0261550 | Msa0358860 | 0.828256 | 9.948449e-55 | -8.615850e-47 |
| Msa0261550 | Msa0376910 | 0.820705 | 5.956901e-53 | -8.615850e-47 |
| Msa0261550 | Msa0381610 | -0.809510 | 1.825599e-50 | -8.615850e-47 |
| Msa0261550 | Msa0382370 | 0.800734 | 1.254365e-48 | -8.615850e-47 |
| Msa0261550 | Msa0385500 | 0.816467 | 5.448870e-52 | -8.615850e-47 |
| Msa0261550 | Msa0394340 | 0.801400 | 9.165822e-49 | -8.615850e-47 |
| Msa0261550 | Msa0401560 | 0.809756 | 1.617017e-50 | -8.615850e-47 |
| Msa0261550 | Msa0402790 | 0.816651 | 4.954069e-52 | -8.615850e-47 |
| Msa0261550 | Msa0412840 | 0.820525 | 6.552164e-53 | -8.615850e-47 |
| Msa0261550 | Msa0413410 | 0.806474 | 8.083122e-50 | -8.615850e-47 |
| Msa0261550 | Msa0415430 | 0.811343 | 7.341845e-51 | -8.615850e-47 |
| Msa0261550 | Msa0423760 | 0.804933 | 1.702547e-49 | -8.615850e-47 |
| Msa0261550 | Msa0434180 | 0.804364 | 2.238647e-49 | -8.615850e-47 |
| Msa0261550 | Msa0442200 | 0.806244 | 9.036496e-50 | -8.615850e-47 |
| Msa0261550 | Msa0453350 | 0.849529 | 3.050714e-60 | -8.615850e-47 |
| Msa0261550 | Msa0457510 | 0.812791 | 3.548861e-51 | -8.615850e-47 |
| Msa0261550 | Msa0467380 | 0.807822 | 4.189712e-50 | -8.615850e-47 |
| Msa0261550 | Msa0469620 | -0.811975 | 5.348902e-51 | -8.615850e-47 |
| Msa0261550 | Msa0471900 | 0.808996 | 2.353220e-50 | -8.615850e-47 |
| Msa0261550 | Msa0482940 | 0.811684 | 6.188990e-51 | -8.615850e-47 |
| Msa0261550 | Msa0485850 | 0.801632 | 8.215948e-49 | -8.615850e-47 |
| Msa0261550 | Msa0496450 | 0.849825 | 2.521163e-60 | -8.615850e-47 |
| Msa0261550 | Msa0497210 | 0.809020 | 2.325509e-50 | -8.615850e-47 |
| Msa0261550 | Msa0510840 | 0.829714 | 4.410758e-55 | -8.615850e-47 |
| Msa0261550 | Msa0524500 | 0.811102 | 8.282030e-51 | -8.615850e-47 |
| Msa0261550 | Msa0529040 | 0.833212 | 6.072412e-56 | -8.615850e-47 |
| Msa0261550 | Msa0531530 | 0.811791 | 5.865703e-51 | -8.615850e-47 |
| Msa0261550 | Msa0542290 | 0.827380 | 1.615285e-54 | -8.615850e-47 |
| Msa0261550 | Msa0542560 | 0.802551 | 5.316917e-49 | -8.615850e-47 |
| Msa0261550 | Msa0545700 | 0.808089 | 3.675923e-50 | -8.615850e-47 |
| Msa0261550 | Msa0547160 | 0.831963 | 1.238760e-55 | -8.615850e-47 |
| Msa0261550 | Msa0556060 | 0.820610 | 6.262013e-53 | -8.615850e-47 |
| Msa0261550 | Msa0557480 | 0.833978 | 3.907744e-56 | -8.615850e-47 |
| Msa0261550 | Msa0566020 | 0.806388 | 8.429106e-50 | -8.615850e-47 |
| Msa0261550 | Msa0581110 | 0.804728 | 1.879179e-49 | -8.615850e-47 |
| Msa0261550 | Msa0587910 | 0.801457 | 8.922837e-49 | -8.615850e-47 |
| Msa0261550 | Msa0588260 | 0.845621 | 3.622226e-59 | -8.615850e-47 |
| Msa0261550 | Msa0592440 | 0.809390 | 1.937949e-50 | -8.615850e-47 |
| Msa0261550 | Msa0600080 | 0.828748 | 7.567003e-55 | -8.615850e-47 |
| Msa0261550 | Msa0601530 | 0.802349 | 5.852353e-49 | -8.615850e-47 |
| Msa0261550 | Msa0604290 | 0.819716 | 1.003657e-52 | -8.615850e-47 |
| Msa0261550 | Msa0610430 | 0.808067 | 3.716283e-50 | -8.615850e-47 |
| Msa0261550 | Msa0610840 | -0.857230 | 1.880311e-62 | -8.615850e-47 |
| Msa0261550 | Msa0623860 | 0.802366 | 5.805191e-49 | -8.615850e-47 |
| Msa0261550 | Msa0635380 | 0.818531 | 1.867346e-52 | -8.615850e-47 |
| Msa0261550 | Msa0642970 | 0.834816 | 2.407817e-56 | -8.615850e-47 |
| Msa0261550 | Msa0649220 | 0.819672 | 1.027286e-52 | -8.615850e-47 |
| Msa0261550 | Msa0661710 | 0.825012 | 5.910519e-54 | -8.615850e-47 |
| Msa0261550 | Msa0682680 | 0.853370 | 2.499497e-61 | -8.615850e-47 |
| Msa0261550 | Msa0683730 | 0.800137 | 1.659371e-48 | -8.615850e-47 |
| Msa0261550 | Msa0692040 | -0.802753 | 4.829965e-49 | -8.615850e-47 |
| Msa0261550 | Msa0698540 | 0.827587 | 1.440590e-54 | -8.615850e-47 |
| Msa0261550 | Msa0709120 | 0.803933 | 2.751481e-49 | -8.615850e-47 |
| Msa0261550 | Msa0721280 | 0.813635 | 2.316873e-51 | -8.615850e-47 |
| Msa0261550 | Msa0727150 | 0.802960 | 4.377922e-49 | -8.615850e-47 |
| Msa0261550 | Msa0729720 | 0.823496 | 1.342740e-53 | -8.615850e-47 |
| Msa0261550 | Msa0737600 | 0.811725 | 6.065266e-51 | -8.615850e-47 |
| Msa0261550 | Msa0747260 | 0.802045 | 6.757234e-49 | -8.615850e-47 |
| Msa0261550 | Msa0748920 | 0.803550 | 3.304586e-49 | -8.615850e-47 |
| Msa0261550 | Msa0769980 | 0.816840 | 4.492834e-52 | -8.615850e-47 |
| Msa0261550 | Msa0773850 | 0.811307 | 7.476587e-51 | -8.615850e-47 |
| Msa0261550 | Msa0789020 | 0.810032 | 1.410014e-50 | -8.615850e-47 |
| Msa0261550 | Msa0793380 | 0.819926 | 8.984719e-53 | -8.615850e-47 |
| Msa0261550 | Msa0800370 | 0.804086 | 2.557051e-49 | -8.615850e-47 |
| Msa0261550 | Msa0801110 | 0.809255 | 2.071617e-50 | -8.615850e-47 |
| Msa0261550 | Msa0808080 | 0.819930 | 8.967466e-53 | -8.615850e-47 |
| Msa0261550 | Msa0816730 | 0.813391 | 2.620655e-51 | -8.615850e-47 |
| Msa0261550 | Msa0820850 | 0.818370 | 2.031271e-52 | -8.615850e-47 |
| Msa0261550 | Msa0832340 | 0.819883 | 9.189784e-53 | -8.615850e-47 |
| Msa0261550 | Msa0849030 | 0.832804 | 7.667770e-56 | -8.615850e-47 |
| Msa0261550 | Msa0857640 | 0.801172 | 1.020813e-48 | -8.615850e-47 |
| Msa0261550 | Msa0861130 | 0.815036 | 1.135392e-51 | -8.615850e-47 |
| Msa0261550 | Msa0876190 | 0.821241 | 4.483006e-53 | -8.615850e-47 |
| Msa0261550 | Msa0877710 | 0.808671 | 2.762186e-50 | -8.615850e-47 |
| Msa0261550 | Msa0888260 | 0.803167 | 3.966987e-49 | -8.615850e-47 |
| Msa0261550 | Msa0894950 | 0.804266 | 2.345443e-49 | -8.615850e-47 |
| Msa0261550 | Msa0923780 | 0.800362 | 1.493660e-48 | -8.615850e-47 |
| Msa0261550 | Msa0927260 | 0.808655 | 2.783245e-50 | -8.615850e-47 |
| Msa0261550 | Msa0932830 | 0.816503 | 5.347832e-52 | -8.615850e-47 |
| Msa0261550 | Msa0933380 | 0.858142 | 1.009258e-62 | -8.615850e-47 |
| Msa0261550 | Msa0942550 | -0.810973 | 8.830389e-51 | -8.615850e-47 |
| Msa0261550 | Msa0942560 | -0.808173 | 3.528206e-50 | -8.615850e-47 |
| Msa0261550 | Msa0947660 | 0.806717 | 7.182649e-50 | -8.615850e-47 |
| Msa0261550 | Msa0958000 | 0.802725 | 4.895476e-49 | -8.615850e-47 |
| Msa0261550 | Msa0962840 | 0.810727 | 9.981801e-51 | -8.615850e-47 |
| Msa0261550 | Msa0969730 | 0.801847 | 7.420693e-49 | -8.615850e-47 |
| Msa0261550 | Msa0971020 | 0.815855 | 7.462776e-52 | -8.615850e-47 |
| Msa0261550 | Msa0971160 | 0.838045 | 3.630154e-57 | -8.615850e-47 |
| Msa0261550 | Msa0974950 | 0.829672 | 4.514716e-55 | -8.615850e-47 |
| Msa0261550 | Msa0992020 | 0.806297 | 8.809654e-50 | -8.615850e-47 |
| Msa0261550 | Msa0994370 | 0.835086 | 2.058999e-56 | -8.615850e-47 |
| Msa0261550 | Msa0999050 | -0.815873 | 7.396011e-52 | -8.615850e-47 |
| Msa0261550 | Msa0999430 | 0.813565 | 2.400594e-51 | -8.615850e-47 |
| Msa0261550 | Msa1023180 | 0.830230 | 3.300540e-55 | -8.615850e-47 |
| Msa0261550 | Msa1029050 | 0.833764 | 4.420779e-56 | -8.615850e-47 |
| Msa0261550 | Msa1034150 | 0.810335 | 1.213179e-50 | -8.615850e-47 |
| Msa0261550 | Msa1037420 | 0.836207 | 1.071209e-56 | -8.615850e-47 |
| Msa0261550 | Msa1043050 | 0.838307 | 3.107768e-57 | -8.615850e-47 |
| Msa0261550 | Msa1048160 | 0.825520 | 4.482765e-54 | -8.615850e-47 |
| Msa0261550 | Msa1054150 | -0.805419 | 1.347101e-49 | -8.615850e-47 |
| Msa0261550 | Msa1081930 | 0.816441 | 5.521895e-52 | -8.615850e-47 |
| Msa0261550 | Msa1091100 | 0.813411 | 2.594888e-51 | -8.615850e-47 |
| Msa0261550 | Msa1100050 | 0.805235 | 1.472550e-49 | -8.615850e-47 |
| Msa0261550 | Msa1109680 | 0.800491 | 1.406016e-48 | -8.615850e-47 |
| Msa0261550 | Msa1123810 | 0.812633 | 3.843187e-51 | -8.615850e-47 |
| Msa0261550 | Msa1126830 | 0.802778 | 4.772460e-49 | -8.615850e-47 |
| Msa0261550 | Msa1133230 | 0.810013 | 1.423351e-50 | -8.615850e-47 |
| Msa0261550 | Msa1133250 | 0.811970 | 5.364137e-51 | -8.615850e-47 |
| Msa0261550 | Msa1134090 | 0.803664 | 3.129140e-49 | -8.615850e-47 |
| Msa0261550 | Msa1135470 | 0.823039 | 1.716836e-53 | -8.615850e-47 |
| Msa0261550 | Msa1137570 | 0.800599 | 1.336429e-48 | -8.615850e-47 |
| Msa0261550 | Msa1150710 | 0.850133 | 2.067983e-60 | -8.615850e-47 |
| Msa0261550 | Msa1158640 | -0.812830 | 3.480764e-51 | -8.615850e-47 |
| Msa0261550 | Msa1167340 | 0.801440 | 8.995840e-49 | -8.615850e-47 |
| Msa0261550 | Msa1168580 | 0.816758 | 4.689219e-52 | -8.615850e-47 |
| Msa0261550 | Msa1169550 | 0.817756 | 2.795547e-52 | -8.615850e-47 |
| Msa0261550 | Msa1174040 | 0.804003 | 2.660919e-49 | -8.615850e-47 |
| Msa0261550 | Msa1210020 | 0.814524 | 1.474719e-51 | -8.615850e-47 |
| Msa0261550 | Msa1211420 | -0.801512 | 8.696134e-49 | -8.615850e-47 |
| Msa0261550 | Msa1217430 | -0.805699 | 1.176854e-49 | -8.615850e-47 |
| Msa0261550 | Msa1232740 | 0.814127 | 1.805093e-51 | -8.615850e-47 |
| Msa0261550 | Msa1253800 | 0.818376 | 2.024617e-52 | -8.615850e-47 |
| Msa0261550 | Msa1254730 | 0.830906 | 2.255539e-55 | -8.615850e-47 |
| Msa0261550 | Msa1256470 | 0.809767 | 1.607607e-50 | -8.615850e-47 |
| Msa0261550 | Msa1271130 | 0.817902 | 2.591126e-52 | -8.615850e-47 |
| Msa0261550 | Msa1272870 | 0.807385 | 5.186658e-50 | -8.615850e-47 |
| Msa0261550 | Msa1274560 | 0.800135 | 1.660840e-48 | -8.615850e-47 |
| Msa0261550 | Msa1275360 | 0.804855 | 1.767617e-49 | -8.615850e-47 |
| Msa0261550 | Msa1286800 | 0.829517 | 4.926355e-55 | -8.615850e-47 |
| Msa0261550 | Msa1294820 | 0.814383 | 1.584644e-51 | -8.615850e-47 |
| Msa0261550 | Msa1296830 | 0.831888 | 1.292700e-55 | -8.615850e-47 |
| Msa0261550 | Msa1298510 | 0.809905 | 1.501846e-50 | -8.615850e-47 |
| Msa0261550 | Msa1310400 | 0.829054 | 6.378331e-55 | -8.615850e-47 |
| Msa0261550 | Msa1313320 | 0.830682 | 2.558992e-55 | -8.615850e-47 |
| Msa0261550 | Msa1323690 | 0.804459 | 2.138375e-49 | -8.615850e-47 |
| Msa0261550 | Msa1325860 | -0.808486 | 3.025516e-50 | -8.615850e-47 |
| Msa0261550 | Msa1336560 | 0.800520 | 1.386666e-48 | -8.615850e-47 |
| Msa0261550 | Msa1337170 | 0.803624 | 3.189057e-49 | -8.615850e-47 |
| Msa0261550 | Msa1344660 | 0.802245 | 6.147896e-49 | -8.615850e-47 |
| Msa0261550 | Msa1345220 | 0.802532 | 5.365401e-49 | -8.615850e-47 |
| Msa0261550 | Msa1357890 | 0.814647 | 1.385066e-51 | -8.615850e-47 |
| Msa0261550 | Msa1359270 | 0.803923 | 2.765251e-49 | -8.615850e-47 |
| Msa0261550 | Msa1365800 | 0.801883 | 7.296618e-49 | -8.615850e-47 |
| Msa0261550 | Msa1367590 | 0.800485 | 1.409810e-48 | -8.615850e-47 |
| Msa0261550 | Msa1368530 | 0.805274 | 1.444808e-49 | -8.615850e-47 |
| Msa0261550 | Msa1370070 | -0.816482 | 5.404812e-52 | -8.615850e-47 |
| Msa0261550 | Msa1370340 | 0.803241 | 3.829644e-49 | -8.615850e-47 |
| Msa0261550 | Msa1370590 | 0.805452 | 1.325968e-49 | -8.615850e-47 |
| Msa0261550 | Msa1379500 | 0.804662 | 1.939529e-49 | -8.615850e-47 |
| Msa0261550 | Msa1384100 | 0.808411 | 3.138049e-50 | -8.615850e-47 |
| Msa0261550 | Msa1385770 | 0.830071 | 3.609805e-55 | -8.615850e-47 |
| Msa0261550 | Msa1390700 | 0.816456 | 5.477877e-52 | -8.615850e-47 |
| Msa0261550 | Msa1392160 | -0.821881 | 3.189515e-53 | -8.615850e-47 |
| Msa0261550 | Msa1392910 | 0.817345 | 3.460234e-52 | -8.615850e-47 |
| Msa0261550 | Msa1397120 | 0.814895 | 1.220319e-51 | -8.615850e-47 |
| Msa0261550 | Msa1398090 | 0.819842 | 9.391404e-53 | -8.615850e-47 |
| Msa0261550 | Msa1403340 | 0.830084 | 3.583080e-55 | -8.615850e-47 |
| Msa0261550 | Msa1403890 | 0.811768 | 5.934321e-51 | -8.615850e-47 |
| Msa0261550 | Msa1404550 | 0.805120 | 1.556213e-49 | -8.615850e-47 |
| Msa0261550 | Msa1409240 | 0.831417 | 1.689646e-55 | -8.615850e-47 |
| Msa0261550 | Msa1410690 | 0.809843 | 1.548535e-50 | -8.615850e-47 |
| Msa0261550 | Msa1420990 | 0.807619 | 4.627179e-50 | -8.615850e-47 |
| Msa0261550 | Msa1422810 | 0.805494 | 1.299154e-49 | -8.615850e-47 |
| Msa0261550 | Msa1434140 | 0.823534 | 1.315049e-53 | -8.615850e-47 |
| Msa0261550 | Msa1444120 | 0.809537 | 1.801874e-50 | -8.615850e-47 |
| Msa0261550 | Msa1448630 | 0.807694 | 4.460627e-50 | -8.615850e-47 |
| Msa0261550 | Msa1451550 | 0.813951 | 1.973626e-51 | -8.615850e-47 |
| Msa0261550 | Msa1454570 | 0.826246 | 3.013643e-54 | -8.615850e-47 |
| Msa0261550 | Msa1454680 | 0.804964 | 1.677313e-49 | -8.615850e-47 |
| Msa0261550 | Msa1460320 | -0.825000 | 5.949105e-54 | -8.615850e-47 |
| Msa0261550 | Msa1462290 | 0.809017 | 2.328924e-50 | -8.615850e-47 |
| Msa0261550 | Msa1466540 | 0.803242 | 3.827361e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0261550 | MtrunA17_Chr2g0323761 | 97.701 | 87 | 2 | 0 | 1 | 87 | 1 | 87 | 5.32e-61 | 180 |
| Msa0261550 | MtrunA17_Chr2g0323741 | 81.111 | 90 | 14 | 2 | 1 | 87 | 1 | 90 | 2.44e-48 | 148 |
| Msa0261550 | MtrunA17_Chr2g0323751 | 75.824 | 91 | 18 | 2 | 1 | 87 | 1 | 91 | 9.83e-46 | 141 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0261550 | AT4G28240.1 | 46.739 | 92 | 38 | 3 | 1 | 87 | 1 | 86 | 3.70e-20 | 77.4 |
Find 33 sgRNAs with CRISPR-Local
Find 36 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAAGAGACGAGTTCGGTTT+TGG | 0.305492 | 2_2:-60006259 | None:intergenic |
| TCCGATCTCCGGCCGTTGTC+CGG | 0.378956 | 2_2:+60006296 | Msa0261550:CDS |
| AATTCATGTACATAACTTTC+CGG | 0.379119 | 2_2:-60006382 | None:intergenic |
| AAGTTATGTACATGAATTGC+TGG | 0.397828 | 2_2:+60006387 | Msa0261550:CDS |
| TGAGTTACTTGAACCGTGTT+TGG | 0.412758 | 2_2:+60006159 | Msa0261550:CDS |
| GCGCAAGGCCACACCGATCC+AGG | 0.445476 | 2_2:+60006203 | Msa0261550:CDS |
| CAACGACGCCGGACAACGGC+CGG | 0.455353 | 2_2:-60006304 | None:intergenic |
| CCGGAGATCGGATAAACTTC+CGG | 0.462860 | 2_2:-60006285 | None:intergenic |
| CGGCAGAGAAGAGACGAGTT+CGG | 0.471245 | 2_2:-60006265 | None:intergenic |
| GTTGTCCGGCGTCGTTGTAT+CGG | 0.492908 | 2_2:+60006310 | Msa0261550:CDS |
| GTGGCCTTGCGCCACCGCTA+CGG | 0.494254 | 2_2:-60006192 | None:intergenic |
| TTTGCACTTGTGGCCTGGAT+CGG | 0.503366 | 2_2:-60006216 | None:intergenic |
| GCCGGACAACGGCCGGAGAT+CGG | 0.526728 | 2_2:-60006297 | None:intergenic |
| AGTTATGTACATGAATTGCT+GGG | 0.535583 | 2_2:+60006388 | Msa0261550:CDS |
| CGAACTCGTCTCTTCTCTGC+CGG | 0.543523 | 2_2:+60006266 | Msa0261550:CDS |
| GCAACCGTAGCGGTGGCGCA+AGG | 0.545121 | 2_2:+60006188 | Msa0261550:CDS |
| AACTTTCCGGAGAGAATCAT+CGG | 0.554058 | 2_2:-60006369 | None:intergenic |
| CCGGAAGTTTATCCGATCTC+CGG | 0.556561 | 2_2:+60006285 | Msa0261550:CDS |
| GAAGAACCGATGATTCTCTC+CGG | 0.569326 | 2_2:+60006363 | Msa0261550:CDS |
| CTTGAACCGTGTTTGGATGG+CGG | 0.571348 | 2_2:+60006166 | Msa0261550:CDS |
| TTACTTGAACCGTGTTTGGA+TGG | 0.584544 | 2_2:+60006163 | Msa0261550:CDS |
| GATGGCGGCAACCGTAGCGG+TGG | 0.585060 | 2_2:+60006181 | Msa0261550:CDS |
| TACATGAATTGCTGGGGTCA+AGG | 0.586623 | 2_2:+60006395 | Msa0261550:CDS |
| GATACAACGACGCCGGACAA+CGG | 0.587431 | 2_2:-60006308 | None:intergenic |
| CACAAGTGCAAAACAGCCGT+TGG | 0.609626 | 2_2:+60006227 | Msa0261550:CDS |
| GTCCGGCGTCGTTGTATCGG+AGG | 0.612227 | 2_2:+60006313 | Msa0261550:CDS |
| CGGTTGCCGCCATCCAAACA+CGG | 0.636549 | 2_2:-60006172 | None:intergenic |
| TGTATCGGAGGTGAGTTCTG+AGG | 0.650249 | 2_2:+60006325 | Msa0261550:CDS |
| ATCGGAGGTGAGTTCTGAGG+CGG | 0.654083 | 2_2:+60006328 | Msa0261550:CDS |
| TTGGATGGCGGCAACCGTAG+CGG | 0.657920 | 2_2:+60006178 | Msa0261550:CDS |
| CACCTCCGATACAACGACGC+CGG | 0.661000 | 2_2:-60006315 | None:intergenic |
| ACTTGTGGCCTGGATCGGTG+TGG | 0.680459 | 2_2:-60006211 | None:intergenic |
| GTTATGTACATGAATTGCTG+GGG | 0.680638 | 2_2:+60006389 | Msa0261550:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AATTCATGTACATAACTTTC+CGG | - | chr2_2:60006385-60006404 | None:intergenic | 25.0% |
| AAGTTATGTACATGAATTGC+TGG | + | chr2_2:60006387-60006406 | Msa0261550:CDS | 30.0% | |
| AGTTATGTACATGAATTGCT+GGG | + | chr2_2:60006388-60006407 | Msa0261550:CDS | 30.0% | |
| !! | GTTTTGGTGAATAGATCCAA+CGG | - | chr2_2:60006246-60006265 | None:intergenic | 35.0% |
| GTTATGTACATGAATTGCTG+GGG | + | chr2_2:60006389-60006408 | Msa0261550:CDS | 35.0% | |
| TGAGTTACTTGAACCGTGTT+TGG | + | chr2_2:60006159-60006178 | Msa0261550:CDS | 40.0% | |
| TTACTTGAACCGTGTTTGGA+TGG | + | chr2_2:60006163-60006182 | Msa0261550:CDS | 40.0% | |
| AACTTTCCGGAGAGAATCAT+CGG | - | chr2_2:60006372-60006391 | None:intergenic | 40.0% | |
| ! | AGAAGAGACGAGTTCGGTTT+TGG | - | chr2_2:60006262-60006281 | None:intergenic | 45.0% |
| GAAGAACCGATGATTCTCTC+CGG | + | chr2_2:60006363-60006382 | Msa0261550:CDS | 45.0% | |
| TACATGAATTGCTGGGGTCA+AGG | + | chr2_2:60006395-60006414 | Msa0261550:CDS | 45.0% | |
| CTTGAACCGTGTTTGGATGG+CGG | + | chr2_2:60006166-60006185 | Msa0261550:CDS | 50.0% | |
| TTTGCACTTGTGGCCTGGAT+CGG | - | chr2_2:60006219-60006238 | None:intergenic | 50.0% | |
| !! | CAACGGCTGTTTTGCACTTG+TGG | - | chr2_2:60006229-60006248 | None:intergenic | 50.0% |
| CACAAGTGCAAAACAGCCGT+TGG | + | chr2_2:60006227-60006246 | Msa0261550:CDS | 50.0% | |
| CCGGAGATCGGATAAACTTC+CGG | - | chr2_2:60006288-60006307 | None:intergenic | 50.0% | |
| CCGGAAGTTTATCCGATCTC+CGG | + | chr2_2:60006285-60006304 | Msa0261550:CDS | 50.0% | |
| TGTATCGGAGGTGAGTTCTG+AGG | + | chr2_2:60006325-60006344 | Msa0261550:CDS | 50.0% | |
| !! | GCTGTTTTGCACTTGTGGCC+TGG | - | chr2_2:60006224-60006243 | None:intergenic | 55.0% |
| CGGCAGAGAAGAGACGAGTT+CGG | - | chr2_2:60006268-60006287 | None:intergenic | 55.0% | |
| CGAACTCGTCTCTTCTCTGC+CGG | + | chr2_2:60006266-60006285 | Msa0261550:CDS | 55.0% | |
| GATACAACGACGCCGGACAA+CGG | - | chr2_2:60006311-60006330 | None:intergenic | 55.0% | |
| GTTGTCCGGCGTCGTTGTAT+CGG | + | chr2_2:60006310-60006329 | Msa0261550:CDS | 55.0% | |
| !! | ATCGGAGGTGAGTTCTGAGG+CGG | + | chr2_2:60006328-60006347 | Msa0261550:CDS | 55.0% |
| CGGTTGCCGCCATCCAAACA+CGG | - | chr2_2:60006175-60006194 | None:intergenic | 60.0% | |
| ! | TTGGATGGCGGCAACCGTAG+CGG | + | chr2_2:60006178-60006197 | Msa0261550:CDS | 60.0% |
| ACTTGTGGCCTGGATCGGTG+TGG | - | chr2_2:60006214-60006233 | None:intergenic | 60.0% | |
| CACCTCCGATACAACGACGC+CGG | - | chr2_2:60006318-60006337 | None:intergenic | 60.0% | |
| TCCGATCTCCGGCCGTTGTC+CGG | + | chr2_2:60006296-60006315 | Msa0261550:CDS | 65.0% | |
| GTCCGGCGTCGTTGTATCGG+AGG | + | chr2_2:60006313-60006332 | Msa0261550:CDS | 65.0% | |
| ! | GATGGCGGCAACCGTAGCGG+TGG | + | chr2_2:60006181-60006200 | Msa0261550:CDS | 70.0% |
| GCAACCGTAGCGGTGGCGCA+AGG | + | chr2_2:60006188-60006207 | Msa0261550:CDS | 70.0% | |
| ! | GTGGCCTTGCGCCACCGCTA+CGG | - | chr2_2:60006195-60006214 | None:intergenic | 70.0% |
| GCGCAAGGCCACACCGATCC+AGG | + | chr2_2:60006203-60006222 | Msa0261550:CDS | 70.0% | |
| GCCGGACAACGGCCGGAGAT+CGG | - | chr2_2:60006300-60006319 | None:intergenic | 70.0% | |
| CAACGACGCCGGACAACGGC+CGG | - | chr2_2:60006307-60006326 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 60006158 | 60006421 | 60006158 | ID=Msa0261550;Name=Msa0261550 |
| chr2_2 | mRNA | 60006158 | 60006421 | 60006158 | ID=Msa0261550-mRNA-1;Parent=Msa0261550;Name=Msa0261550-mRNA-1;_AED=0.31;_eAED=0.31;_QI=0|-1|0|1|-1|1|1|0|87 |
| chr2_2 | exon | 60006158 | 60006421 | 60006158 | ID=Msa0261550-mRNA-1:exon:18474;Parent=Msa0261550-mRNA-1 |
| chr2_2 | CDS | 60006158 | 60006421 | 60006158 | ID=Msa0261550-mRNA-1:cds;Parent=Msa0261550-mRNA-1 |
| Gene Sequence |
| Protein sequence |
