Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0204830 | XP_003595077.1 | 94.262 | 244 | 14 | 0 | 1 | 244 | 1 | 244 | 5.51e-169 | 476 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0204830 | sp|Q2HIV9|BH035_ARATH | 62.449 | 245 | 83 | 6 | 1 | 241 | 1 | 240 | 2.03e-94 | 280 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0204830 | G7IG90 | 94.262 | 244 | 14 | 0 | 1 | 244 | 1 | 244 | 2.63e-169 | 476 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0204830 | TF | bHLH |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0090090 | Msa0204830 | 0.800453 | 1.431095e-48 | -8.615850e-47 |
| Msa0204820 | Msa0204830 | 0.805986 | 1.024400e-49 | -8.615850e-47 |
| Msa0204830 | Msa0244890 | 0.886573 | 3.040898e-72 | -8.615850e-47 |
| Msa0204830 | Msa0244900 | 0.826463 | 2.676432e-54 | -8.615850e-47 |
| Msa0204830 | Msa0254260 | 0.802107 | 6.562134e-49 | -8.615850e-47 |
| Msa0204830 | Msa0283480 | 0.810940 | 8.976744e-51 | -8.615850e-47 |
| Msa0204830 | Msa0283490 | 0.882496 | 9.922775e-71 | -8.615850e-47 |
| Msa0204830 | Msa0331970 | 0.974809 | 8.173728e-139 | -8.615850e-47 |
| Msa0204830 | Msa0511780 | 0.805046 | 1.612306e-49 | -8.615850e-47 |
| Msa0204830 | Msa0567380 | 0.813364 | 2.656708e-51 | -8.615850e-47 |
| Msa0204830 | Msa0813160 | 0.807081 | 6.017014e-50 | -8.615850e-47 |
| Msa0204830 | Msa0945030 | 0.811809 | 5.813901e-51 | -8.615850e-47 |
| Msa0204830 | Msa1068720 | 0.803786 | 2.951662e-49 | -8.615850e-47 |
| Msa0204830 | Msa1106590 | 0.801426 | 9.055309e-49 | -8.615850e-47 |
| Msa0204830 | Msa1156720 | 0.801864 | 7.363949e-49 | -8.615850e-47 |
| Msa0204830 | Msa1160530 | 0.803309 | 3.706999e-49 | -8.615850e-47 |
| Msa0204830 | Msa1439650 | 0.885264 | 9.443371e-72 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0204830 | MtrunA17_Chr2g0298751 | 94.262 | 244 | 14 | 0 | 1 | 244 | 1 | 244 | 5.07e-173 | 476 |
| Msa0204830 | MtrunA17_Chr8g0365711 | 32.353 | 170 | 107 | 2 | 51 | 220 | 243 | 404 | 1.13e-23 | 98.6 |
| Msa0204830 | MtrunA17_Chr1g0211081 | 32.911 | 237 | 128 | 7 | 6 | 213 | 258 | 492 | 3.77e-22 | 94.7 |
| Msa0204830 | MtrunA17_Chr2g0320291 | 28.796 | 191 | 113 | 5 | 51 | 236 | 132 | 304 | 5.14e-19 | 84.3 |
| Msa0204830 | MtrunA17_Chr7g0252041 | 32.632 | 190 | 115 | 6 | 49 | 232 | 283 | 465 | 8.94e-18 | 82.0 |
| Msa0204830 | MtrunA17_Chr3g0131691 | 30.481 | 187 | 122 | 5 | 48 | 232 | 294 | 474 | 1.12e-17 | 81.6 |
| Msa0204830 | MtrunA17_Chr4g0028071 | 31.098 | 164 | 96 | 3 | 51 | 211 | 148 | 297 | 7.14e-17 | 78.6 |
| Msa0204830 | MtrunA17_Chr7g0260841 | 30.286 | 175 | 85 | 4 | 53 | 227 | 356 | 493 | 1.39e-14 | 72.8 |
| Msa0204830 | MtrunA17_Chr7g0275821 | 27.219 | 169 | 92 | 4 | 53 | 216 | 253 | 395 | 3.59e-14 | 71.2 |
| Msa0204830 | MtrunA17_Chr4g0049331 | 28.049 | 164 | 101 | 4 | 53 | 214 | 136 | 284 | 8.98e-14 | 69.3 |
| Msa0204830 | MtrunA17_Chr8g0366751 | 29.487 | 156 | 96 | 3 | 53 | 202 | 463 | 610 | 1.79e-13 | 69.3 |
| Msa0204830 | MtrunA17_Chr2g0333611 | 23.944 | 213 | 129 | 5 | 27 | 221 | 3 | 200 | 3.21e-13 | 66.6 |
| Msa0204830 | MtrunA17_Chr5g0411341 | 30.719 | 153 | 98 | 4 | 53 | 202 | 494 | 641 | 3.92e-13 | 68.6 |
| Msa0204830 | MtrunA17_Chr8g0346161 | 50.820 | 61 | 23 | 1 | 53 | 113 | 292 | 345 | 2.95e-12 | 65.9 |
| Msa0204830 | MtrunA17_Chr8g0346151 | 60.000 | 45 | 18 | 0 | 53 | 97 | 280 | 324 | 4.23e-12 | 65.1 |
| Msa0204830 | MtrunA17_Chr5g0400661 | 26.257 | 179 | 109 | 6 | 53 | 219 | 150 | 317 | 4.86e-12 | 64.7 |
| Msa0204830 | MtrunA17_Chr2g0280161 | 28.221 | 163 | 103 | 2 | 53 | 214 | 178 | 327 | 5.15e-12 | 64.7 |
| Msa0204830 | MtrunA17_Chr3g0141091 | 51.282 | 78 | 34 | 2 | 48 | 122 | 169 | 245 | 7.77e-12 | 63.9 |
| Msa0204830 | MtrunA17_Chr1g0185621 | 50.909 | 55 | 27 | 0 | 43 | 97 | 466 | 520 | 1.04e-11 | 64.3 |
| Msa0204830 | MtrunA17_Chr5g0411541 | 35.032 | 157 | 80 | 4 | 48 | 204 | 152 | 286 | 1.53e-11 | 63.2 |
| Msa0204830 | MtrunA17_Chr4g0048851 | 28.743 | 167 | 99 | 3 | 50 | 215 | 45 | 192 | 2.83e-11 | 61.2 |
| Msa0204830 | MtrunA17_Chr2g0333641 | 25.758 | 198 | 117 | 6 | 53 | 242 | 138 | 313 | 4.00e-11 | 62.0 |
| Msa0204830 | MtrunA17_Chr4g0054571 | 45.000 | 60 | 33 | 0 | 53 | 112 | 151 | 210 | 5.56e-11 | 61.6 |
| Msa0204830 | MtrunA17_Chr8g0336681 | 26.012 | 173 | 114 | 4 | 46 | 214 | 150 | 312 | 6.97e-11 | 61.2 |
| Msa0204830 | MtrunA17_Chr5g0400621 | 37.838 | 74 | 43 | 1 | 37 | 107 | 139 | 212 | 7.21e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0204830 | AT5G57150.1 | 63.525 | 244 | 81 | 6 | 1 | 241 | 1 | 239 | 1.56e-96 | 283 |
| Msa0204830 | AT4G29930.1 | 55.200 | 250 | 98 | 3 | 1 | 238 | 1 | 248 | 4.84e-90 | 266 |
| Msa0204830 | AT4G29930.6 | 55.417 | 240 | 87 | 3 | 1 | 238 | 1 | 222 | 8.75e-88 | 259 |
| Msa0204830 | AT4G29930.2 | 55.000 | 240 | 85 | 3 | 1 | 238 | 1 | 219 | 7.94e-87 | 257 |
| Msa0204830 | AT5G57150.5 | 65.596 | 218 | 67 | 6 | 1 | 215 | 1 | 213 | 1.63e-86 | 256 |
| Msa0204830 | AT5G57150.2 | 63.801 | 221 | 71 | 6 | 1 | 217 | 1 | 216 | 1.47e-85 | 254 |
| Msa0204830 | AT5G57150.3 | 64.384 | 219 | 69 | 6 | 1 | 215 | 1 | 214 | 1.49e-85 | 254 |
| Msa0204830 | AT5G57150.4 | 64.384 | 219 | 69 | 6 | 1 | 215 | 1 | 214 | 6.71e-84 | 251 |
| Msa0204830 | AT4G29930.3 | 54.825 | 228 | 89 | 3 | 1 | 216 | 1 | 226 | 6.79e-80 | 241 |
| Msa0204830 | AT4G29930.7 | 54.825 | 228 | 89 | 3 | 1 | 216 | 1 | 226 | 6.79e-80 | 241 |
| Msa0204830 | AT4G29930.5 | 54.587 | 218 | 76 | 3 | 1 | 216 | 1 | 197 | 1.58e-76 | 231 |
| Msa0204830 | AT4G29930.4 | 54.857 | 175 | 65 | 3 | 1 | 163 | 1 | 173 | 8.28e-55 | 174 |
| Msa0204830 | AT1G12860.1 | 33.690 | 187 | 111 | 6 | 49 | 232 | 264 | 440 | 1.12e-18 | 84.7 |
| Msa0204830 | AT3G26744.1 | 32.447 | 188 | 116 | 5 | 49 | 232 | 304 | 484 | 2.24e-18 | 84.0 |
| Msa0204830 | AT3G26744.4 | 32.447 | 188 | 116 | 5 | 49 | 232 | 304 | 484 | 2.24e-18 | 84.0 |
| Msa0204830 | AT3G26744.2 | 32.447 | 188 | 116 | 5 | 49 | 232 | 304 | 484 | 2.24e-18 | 84.0 |
| Msa0204830 | AT2G28160.2 | 31.013 | 158 | 93 | 4 | 51 | 205 | 130 | 274 | 2.10e-17 | 80.1 |
| Msa0204830 | AT2G28160.1 | 31.013 | 158 | 93 | 4 | 51 | 205 | 130 | 274 | 2.25e-17 | 80.1 |
| Msa0204830 | AT2G16910.1 | 31.183 | 186 | 113 | 5 | 51 | 225 | 313 | 494 | 3.51e-17 | 80.9 |
| Msa0204830 | AT3G26744.6 | 34.568 | 162 | 95 | 5 | 49 | 206 | 304 | 458 | 1.81e-16 | 78.6 |
| Msa0204830 | AT1G01260.1 | 29.518 | 166 | 82 | 3 | 53 | 218 | 434 | 564 | 5.61e-16 | 77.4 |
| Msa0204830 | AT1G01260.2 | 29.518 | 166 | 82 | 3 | 53 | 218 | 434 | 564 | 5.61e-16 | 77.4 |
| Msa0204830 | AT1G01260.3 | 29.518 | 166 | 82 | 3 | 53 | 218 | 434 | 564 | 5.61e-16 | 77.4 |
| Msa0204830 | AT2G46510.1 | 61.818 | 55 | 21 | 0 | 53 | 107 | 396 | 450 | 2.87e-15 | 75.1 |
| Msa0204830 | AT1G12860.2 | 34.783 | 161 | 92 | 6 | 49 | 206 | 264 | 414 | 3.46e-15 | 74.7 |
| Msa0204830 | AT5G46760.1 | 29.032 | 186 | 115 | 7 | 53 | 233 | 416 | 589 | 3.56e-15 | 74.7 |
| Msa0204830 | AT4G17880.1 | 30.625 | 160 | 78 | 4 | 53 | 202 | 417 | 553 | 3.04e-14 | 72.0 |
| Msa0204830 | AT4G16430.1 | 46.053 | 76 | 40 | 1 | 53 | 127 | 321 | 396 | 3.77e-14 | 71.6 |
| Msa0204830 | AT1G32640.1 | 31.333 | 150 | 91 | 4 | 53 | 202 | 453 | 590 | 6.39e-14 | 71.2 |
| Msa0204830 | AT4G37850.2 | 29.444 | 180 | 107 | 6 | 53 | 228 | 153 | 316 | 1.45e-13 | 69.3 |
| Msa0204830 | AT4G37850.1 | 29.444 | 180 | 107 | 6 | 53 | 228 | 153 | 316 | 1.45e-13 | 69.3 |
| Msa0204830 | AT1G63650.3 | 29.213 | 178 | 116 | 4 | 41 | 212 | 397 | 570 | 5.18e-13 | 68.6 |
| Msa0204830 | AT1G63650.1 | 29.213 | 178 | 116 | 4 | 41 | 212 | 397 | 570 | 5.18e-13 | 68.6 |
| Msa0204830 | AT1G63650.2 | 29.213 | 178 | 116 | 4 | 41 | 212 | 397 | 570 | 5.18e-13 | 68.6 |
| Msa0204830 | AT5G46830.1 | 27.473 | 182 | 111 | 3 | 53 | 228 | 344 | 510 | 4.23e-12 | 65.9 |
| Msa0204830 | AT4G21330.1 | 30.357 | 168 | 107 | 4 | 51 | 218 | 31 | 188 | 5.26e-12 | 63.5 |
| Msa0204830 | AT1G10610.1 | 27.513 | 189 | 120 | 4 | 51 | 232 | 263 | 441 | 1.25e-11 | 64.3 |
| Msa0204830 | AT1G10610.2 | 27.513 | 189 | 120 | 4 | 51 | 232 | 233 | 411 | 1.62e-11 | 63.9 |
| Msa0204830 | AT1G10610.3 | 26.064 | 188 | 124 | 3 | 51 | 232 | 166 | 344 | 1.66e-11 | 63.5 |
| Msa0204830 | AT2G22770.1 | 23.834 | 193 | 117 | 3 | 33 | 209 | 113 | 291 | 5.29e-11 | 62.0 |
| Msa0204830 | AT4G00870.1 | 43.333 | 60 | 34 | 0 | 53 | 112 | 250 | 309 | 8.89e-11 | 61.6 |
Find 63 sgRNAs with CRISPR-Local
Find 445 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTAAGGTGGTTGGTTTATT+TGG | 0.143628 | 2_1:-30756161 | None:intergenic |
| TCTTGATCAAAATCATAATT+TGG | 0.197391 | 2_1:-30757498 | None:intergenic |
| CTGATCTGTTCTCTTCTTCT+TGG | 0.200519 | 2_1:-30757541 | None:intergenic |
| TGATGATTGAAAGAAATTTA+AGG | 0.231892 | 2_1:-30756177 | None:intergenic |
| GGATAAAGCTTCAATTATTA+AGG | 0.255192 | 2_1:+30757380 | Msa0204830:CDS |
| TAATTTGGATTAATATTATT+AGG | 0.270353 | 2_1:-30757483 | None:intergenic |
| ACCTATCAAGCTCTTGGGTT+TGG | 0.289916 | 2_1:-30756303 | None:intergenic |
| GTGATGAGTACAAGCTTTAC+TGG | 0.315934 | 2_1:+30756263 | Msa0204830:CDS |
| CCTGATGATGCTGCACCATC+TGG | 0.327488 | 2_1:-30756478 | None:intergenic |
| GAGATAATGGAACTTGAATC+TGG | 0.329852 | 2_1:+30757456 | Msa0204830:CDS |
| TGTTTACCTTGCTAATGTTT+GGG | 0.357210 | 2_1:-30756582 | None:intergenic |
| GATTATTCAAGCTGAGATAA+TGG | 0.358095 | 2_1:+30757443 | Msa0204830:CDS |
| TCCCTTCATTAGATGCTCAT+AGG | 0.368457 | 2_1:-30764476 | None:intergenic |
| TTTACCTCAAGGACTTCAAT+TGG | 0.374167 | 2_1:-30757594 | None:intergenic |
| ATTGTTACCTATCAAGCTCT+TGG | 0.383647 | 2_1:-30756309 | None:intergenic |
| ATGTTTACCTTGCTAATGTT+TGG | 0.403010 | 2_1:-30756583 | None:intergenic |
| TAGATGCTCATAGGGCTTAG+AGG | 0.411365 | 2_1:-30764467 | None:intergenic |
| TTGTGGTTGCAGCTGGGGAT+TGG | 0.412240 | 2_1:+30756420 | Msa0204830:intron |
| ACATTGTCTCTGAGAGGAAT+AGG | 0.413409 | 2_1:+30756515 | Msa0204830:CDS |
| TTGTTACCTATCAAGCTCTT+GGG | 0.420680 | 2_1:-30756308 | None:intergenic |
| TTGCAGCTGGGGATTGGATG+AGG | 0.423798 | 2_1:+30756426 | Msa0204830:intron |
| TCCAAACCCAAGAGCTTGAT+AGG | 0.430262 | 2_1:+30756302 | Msa0204830:CDS |
| TGAAAGAAATTTAAGGTGGT+TGG | 0.431422 | 2_1:-30756170 | None:intergenic |
| GTTGTTAAAGTTGAAATTGA+AGG | 0.431964 | 2_1:-30756226 | None:intergenic |
| CCCTTCATTAGATGCTCATA+GGG | 0.440042 | 2_1:-30764475 | None:intergenic |
| TATCAAGCTCTTGGGTTTGG+AGG | 0.453409 | 2_1:-30756300 | None:intergenic |
| GCCCTATGAGCATCTAATGA+AGG | 0.457378 | 2_1:+30764474 | Msa0204830:exon |
| CCAGATGGTGCAGCATCATC+AGG | 0.460325 | 2_1:+30756478 | Msa0204830:CDS |
| TGAGCTTGACATGTAACAAA+AGG | 0.468788 | 2_1:+30758938 | Msa0204830:CDS |
| CTGATGATGCTGCACCATCT+GGG | 0.496200 | 2_1:-30756477 | None:intergenic |
| AGCCACTAGTATATAAGTAT+AGG | 0.503320 | 2_1:+30764706 | Msa0204830:three_prime_UTR |
| GCAGCTTAGGGTTACATACA+TGG | 0.504078 | 2_1:+30758897 | Msa0204830:intron |
| AAGAGCTTCCTGTGTTGCTA+AGG | 0.527358 | 2_1:+30757517 | Msa0204830:CDS |
| TTGGGTTTGGAGGAACATGT+TGG | 0.533281 | 2_1:-30756290 | None:intergenic |
| CCCTATGAGCATCTAATGAA+GGG | 0.535852 | 2_1:+30764475 | Msa0204830:exon |
| AATTTCAACTTTAACAACCA+TGG | 0.540733 | 2_1:+30756231 | Msa0204830:exon |
| AGTATATAAGTATAGGATTG+AGG | 0.543177 | 2_1:+30764713 | Msa0204830:three_prime_UTR |
| GAGCTTGACATGTAACAAAA+GGG | 0.547151 | 2_1:+30758939 | Msa0204830:CDS |
| CTTTCCAATTGAAGTCCTTG+AGG | 0.548914 | 2_1:+30757590 | Msa0204830:CDS |
| ATTCCATCACTATATATACT+AGG | 0.557096 | 2_1:+30756124 | Msa0204830:five_prime_UTR |
| TAATAATTTGAAAATTGAGT+AGG | 0.560330 | 2_1:-30764787 | None:intergenic |
| TGATGATGCTGCACCATCTG+GGG | 0.561453 | 2_1:-30756476 | None:intergenic |
| TTCTTGGACCTTAGCAACAC+AGG | 0.566724 | 2_1:-30757525 | None:intergenic |
| AGGGTCATTAAGAGCTGCAA+TGG | 0.567337 | 2_1:-30764447 | None:intergenic |
| CTCATCACCAATGTTCTCCA+TGG | 0.572679 | 2_1:-30756248 | None:intergenic |
| ATCCTATACTTATATACTAG+TGG | 0.576611 | 2_1:-30764708 | None:intergenic |
| AGATGCTCATAGGGCTTAGA+GGG | 0.580755 | 2_1:-30764466 | None:intergenic |
| TTGCCTAGTATATATAGTGA+TGG | 0.583665 | 2_1:-30756127 | None:intergenic |
| TGATGAGTACAAGCTTTACT+GGG | 0.584970 | 2_1:+30756264 | Msa0204830:CDS |
| TTTGAAGACAGTCTTCATTG+AGG | 0.586246 | 2_1:+30759050 | Msa0204830:CDS |
| TTAACAACCATGGAGAACAT+TGG | 0.592898 | 2_1:+30756241 | Msa0204830:exon |
| AGATAATGGAACTTGAATCT+GGG | 0.607917 | 2_1:+30757457 | Msa0204830:CDS |
| TAACAAAAGGGCAGACACAA+TGG | 0.621554 | 2_1:+30758951 | Msa0204830:CDS |
| ACTCTTTGCACTTAGAGCAG+TGG | 0.626022 | 2_1:+30756558 | Msa0204830:CDS |
| TATGATTCAAGCTCCCCAGA+TGG | 0.634637 | 2_1:+30756463 | Msa0204830:CDS |
| CAGCTTAGGGTTACATACAT+GGG | 0.636587 | 2_1:+30758898 | Msa0204830:intron |
| TTGTCTCTGAGAGGAATAGG+AGG | 0.637270 | 2_1:+30756518 | Msa0204830:CDS |
| CTAAGAACATTGTCTCTGAG+AGG | 0.651380 | 2_1:+30756509 | Msa0204830:CDS |
| CTATGAAAATACGAAAGCCA+CGG | 0.657789 | 2_1:-30764738 | None:intergenic |
| AGTGGTCCCAAACATTAGCA+AGG | 0.661525 | 2_1:+30756576 | Msa0204830:CDS |
| TGATTGAAAGAAATTTAAGG+TGG | 0.679867 | 2_1:-30756174 | None:intergenic |
| AGTATAGGATTGAGGAACCG+TGG | 0.680536 | 2_1:+30764721 | Msa0204830:three_prime_UTR |
| ATACATGGGAGAGAATACAA+TGG | 0.777577 | 2_1:+30758912 | Msa0204830:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAAATAAAAAATAATATTT+TGG | + | chr2_1:30757933-30757952 | Msa0204830:intron | 0.0% |
| !!! | TTATTTTAATTTTTAATATT+CGG | + | chr2_1:30763099-30763118 | Msa0204830:intron | 0.0% |
| !! | TACTAAATATATGTTATAAA+TGG | - | chr2_1:30757053-30757072 | None:intergenic | 10.0% |
| !! | TAATTTGGATTAATATTATT+AGG | - | chr2_1:30757486-30757505 | None:intergenic | 10.0% |
| !! | TGTATATAATATTAATTGAA+GGG | + | chr2_1:30757962-30757981 | Msa0204830:intron | 10.0% |
| !! | AATCAAATCAATATTTATAT+TGG | - | chr2_1:30758380-30758399 | None:intergenic | 10.0% |
| !!! | TTTTATTTTAATTTTTTGAC+AGG | - | chr2_1:30758454-30758473 | None:intergenic | 10.0% |
| !! | TATAATCTATATTTATTGTT+GGG | - | chr2_1:30758734-30758753 | None:intergenic | 10.0% |
| !!! | TTTTTGTTTTATATTATTTG+AGG | - | chr2_1:30759216-30759235 | None:intergenic | 10.0% |
| !! | TCAATGTAAATTATATTTAA+AGG | + | chr2_1:30759284-30759303 | Msa0204830:intron | 10.0% |
| !!! | ACAATTTTTTAAATATTGTT+TGG | - | chr2_1:30759379-30759398 | None:intergenic | 10.0% |
| !! | TATATATATTAAACATGAAT+AGG | - | chr2_1:30759949-30759968 | None:intergenic | 10.0% |
| !! | TTATTAAATTATTGTTTACT+TGG | - | chr2_1:30760816-30760835 | None:intergenic | 10.0% |
| !! | TTTCTTATATTAAGATTAAA+TGG | - | chr2_1:30762234-30762253 | None:intergenic | 10.0% |
| !! | AAAAGGAAAAAAATTATATA+TGG | - | chr2_1:30762825-30762844 | None:intergenic | 10.0% |
| !!! | TTTTATTTAACTAAAAAGTA+CGG | - | chr2_1:30764030-30764049 | None:intergenic | 10.0% |
| !!! | CATTTTTTTAATTCAAAATT+AGG | + | chr2_1:30764267-30764286 | Msa0204830:intron | 10.0% |
| !!! | AATTAATTTACTTTTGTACT+TGG | - | chr2_1:30756742-30756761 | None:intergenic | 15.0% |
| !! | AGTACAAAAGTAAATTAATT+TGG | + | chr2_1:30756742-30756761 | Msa0204830:intron | 15.0% |
| !! | AAACAATACATGTATATATA+CGG | - | chr2_1:30756780-30756799 | None:intergenic | 15.0% |
| !!! | TTTTTTAAACATTTTGTTAG+AGG | + | chr2_1:30756863-30756882 | Msa0204830:intron | 15.0% |
| !! | AATAGTTGATTAGAATAATT+CGG | - | chr2_1:30757900-30757919 | None:intergenic | 15.0% |
| !! | GTGTATATAATATTAATTGA+AGG | + | chr2_1:30757961-30757980 | Msa0204830:intron | 15.0% |
| !! | ATAATCTATATTTATTGTTG+GGG | - | chr2_1:30758733-30758752 | None:intergenic | 15.0% |
| !! | CTATAATCTATATTTATTGT+TGG | - | chr2_1:30758735-30758754 | None:intergenic | 15.0% |
| !! | AATAAAGAAAGTGAAATTAA+AGG | - | chr2_1:30759087-30759106 | None:intergenic | 15.0% |
| !! | TAACTAATTGAATTATGTTT+CGG | - | chr2_1:30759430-30759449 | None:intergenic | 15.0% |
| !!! | GATTTTTTTAAGTAATTTAG+TGG | - | chr2_1:30759589-30759608 | None:intergenic | 15.0% |
| !!! | TGAACACTTTTAAATAAAAA+AGG | + | chr2_1:30759819-30759838 | Msa0204830:intron | 15.0% |
| !! | AATTAAGTCAAGTAAAAAAT+AGG | + | chr2_1:30760044-30760063 | Msa0204830:intron | 15.0% |
| !! | ATTAAGTCAAGTAAAAAATA+GGG | + | chr2_1:30760045-30760064 | Msa0204830:intron | 15.0% |
| !! | TTAAATGAAAGAGTTAAAAA+AGG | + | chr2_1:30760090-30760109 | Msa0204830:intron | 15.0% |
| !! | TAAATGAAAGAGTTAAAAAA+GGG | + | chr2_1:30760091-30760110 | Msa0204830:intron | 15.0% |
| !! | AATATAAGAATAATTGACAA+AGG | + | chr2_1:30760643-30760662 | Msa0204830:intron | 15.0% |
| !! | ATATAAGAATAATTGACAAA+GGG | + | chr2_1:30760644-30760663 | Msa0204830:intron | 15.0% |
| !!! | GTTACCTTATTTATTTATTT+CGG | + | chr2_1:30761133-30761152 | Msa0204830:intron | 15.0% |
| !!! | ATATCTTTTTAATAGTTGAT+CGG | - | chr2_1:30761474-30761493 | None:intergenic | 15.0% |
| !! | ATCAACTATTAAAAAGATAT+GGG | + | chr2_1:30761474-30761493 | Msa0204830:intron | 15.0% |
| !!! | TAAAAAAAAGTTACTTGTTT+TGG | + | chr2_1:30761916-30761935 | Msa0204830:intron | 15.0% |
| !!! | AAGAAACAATTTTTTTTATG+TGG | + | chr2_1:30762248-30762267 | Msa0204830:intron | 15.0% |
| !!! | TTTTTTTTTTTTTTGGGATA+AGG | - | chr2_1:30762417-30762436 | None:intergenic | 15.0% |
| !! | ACTATAAAAATTTAACTCAT+GGG | - | chr2_1:30762679-30762698 | None:intergenic | 15.0% |
| !! | TACTATAAAAATTTAACTCA+TGG | - | chr2_1:30762680-30762699 | None:intergenic | 15.0% |
| !! | AAAAAAATTATATATGGACA+AGG | - | chr2_1:30762819-30762838 | None:intergenic | 15.0% |
| !!! | TTTTTTCCTTTTAACAAAAT+AGG | + | chr2_1:30762833-30762852 | Msa0204830:intron | 15.0% |
| !!! | TATTTTCCTATTTTGTTAAA+AGG | - | chr2_1:30762842-30762861 | None:intergenic | 15.0% |
| !!! | ATAAGTCTTTAATTTAATGT+TGG | - | chr2_1:30762881-30762900 | None:intergenic | 15.0% |
| !! | AAAATCTCTATTAATTGATT+TGG | - | chr2_1:30762909-30762928 | None:intergenic | 15.0% |
| !! | AATTCAATATAAAATCATGT+TGG | + | chr2_1:30762939-30762958 | Msa0204830:intron | 15.0% |
| !!! | AACTAATAAATACTTTTTCA+GGG | - | chr2_1:30763186-30763205 | None:intergenic | 15.0% |
| !! | AACATGCATTATTATATATA+GGG | + | chr2_1:30763441-30763460 | Msa0204830:intron | 15.0% |
| !! | CTCATTTAAATAGTAAAATA+TGG | - | chr2_1:30763553-30763572 | None:intergenic | 15.0% |
| !!! | TTATTTTTAAAATGTTGTGT+TGG | - | chr2_1:30763645-30763664 | None:intergenic | 15.0% |
| !! | ATAAGTATTATAACTTATCA+TGG | + | chr2_1:30764083-30764102 | Msa0204830:intron | 15.0% |
| !!! | TAATGAGGTATTATTTTTTA+GGG | - | chr2_1:30764152-30764171 | None:intergenic | 15.0% |
| !!! | ATAATGAGGTATTATTTTTT+AGG | - | chr2_1:30764153-30764172 | None:intergenic | 15.0% |
| !! | AGAAAATAAAATAAAATGAG+AGG | + | chr2_1:30764324-30764343 | Msa0204830:intron | 15.0% |
| !! | TAATAATTTGAAAATTGAGT+AGG | - | chr2_1:30764790-30764809 | None:intergenic | 15.0% |
| !!! | ACTCAATTTTCAAATTATTA+AGG | + | chr2_1:30764790-30764809 | Msa0204830:three_prime_UTR | 15.0% |
| !! | TGATGATTGAAAGAAATTTA+AGG | - | chr2_1:30756180-30756199 | None:intergenic | 20.0% |
| !!! | ATCTTGATAATTGAGATATA+TGG | + | chr2_1:30756397-30756416 | Msa0204830:intron | 20.0% |
| !!! | TTTGTTTTGTTTGAATTAAG+TGG | + | chr2_1:30756686-30756705 | Msa0204830:intron | 20.0% |
| !! | ATAATTACTATACCATATGA+TGG | - | chr2_1:30757292-30757311 | None:intergenic | 20.0% |
| !! | CATATGGTATAGTAATTATT+TGG | + | chr2_1:30757293-30757312 | Msa0204830:intron | 20.0% |
| !! | TCTTGATCAAAATCATAATT+TGG | - | chr2_1:30757501-30757520 | None:intergenic | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | + | chr2_1:30757996-30758015 | Msa0204830:intron | 20.0% |
| !!! | CACTTTTAAGTATAAGAATT+AGG | - | chr2_1:30758105-30758124 | None:intergenic | 20.0% |
| !! | ACAAAAATAAGACATTGTAT+AGG | + | chr2_1:30758335-30758354 | Msa0204830:intron | 20.0% |
| !! | CAAAAATAAGACATTGTATA+GGG | + | chr2_1:30758336-30758355 | Msa0204830:intron | 20.0% |
| !!! | TGTCTATTTTATTAGAGAAA+TGG | - | chr2_1:30758507-30758526 | None:intergenic | 20.0% |
| !! | TCAGATAAAAAAAATAGTAG+TGG | + | chr2_1:30758528-30758547 | Msa0204830:intron | 20.0% |
| !! | CAGATAAAAAAAATAGTAGT+GGG | + | chr2_1:30758529-30758548 | Msa0204830:intron | 20.0% |
| !!! | CTAATATATTTTCTCTACTA+GGG | - | chr2_1:30758629-30758648 | None:intergenic | 20.0% |
| !! | GAACATGAACATAAAAAATT+AGG | - | chr2_1:30758652-30758671 | None:intergenic | 20.0% |
| !! | TAATCTATATTTATTGTTGG+GGG | - | chr2_1:30758732-30758751 | None:intergenic | 20.0% |
| !! | TGATGCTAAAAAAATAAATG+TGG | + | chr2_1:30758791-30758810 | Msa0204830:intron | 20.0% |
| !! | GATGCTAAAAAAATAAATGT+GGG | + | chr2_1:30758792-30758811 | Msa0204830:intron | 20.0% |
| !! | ATGCTAAAAAAATAAATGTG+GGG | + | chr2_1:30758793-30758812 | Msa0204830:intron | 20.0% |
| !!! | TCCTATTTAATTTGCTTTAT+AGG | + | chr2_1:30759160-30759179 | Msa0204830:intron | 20.0% |
| !! | ACCTATAAAGCAAATTAAAT+AGG | - | chr2_1:30759164-30759183 | None:intergenic | 20.0% |
| !!! | ACATTTTAAGATGAATAAGT+GGG | - | chr2_1:30759332-30759351 | None:intergenic | 20.0% |
| !! | AACTAATTGAATTATGTTTC+GGG | - | chr2_1:30759429-30759448 | None:intergenic | 20.0% |
| !! | AAATATTGTTAGCTATTCAT+CGG | + | chr2_1:30759616-30759635 | Msa0204830:intron | 20.0% |
| !! | AAATAAAAAAGGCAATAATG+AGG | + | chr2_1:30759830-30759849 | Msa0204830:intron | 20.0% |
| !! | AATAAAAAAGGCAATAATGA+GGG | + | chr2_1:30759831-30759850 | Msa0204830:intron | 20.0% |
| !! | AGTAGTATAATACTCAAAAT+GGG | - | chr2_1:30759901-30759920 | None:intergenic | 20.0% |
| !! | AAGTAGTATAATACTCAAAA+TGG | - | chr2_1:30759902-30759921 | None:intergenic | 20.0% |
| !!! | TAGGAGTATAAAAAAAGAAT+AGG | - | chr2_1:30759930-30759949 | None:intergenic | 20.0% |
| !! | AAATGAAAGAGTTAAAAAAG+GGG | + | chr2_1:30760092-30760111 | Msa0204830:intron | 20.0% |
| !! | AAGCACAATATTTAGAAAAT+TGG | - | chr2_1:30760418-30760437 | None:intergenic | 20.0% |
| !!! | TATAGAATTTTAACTCTTCA+TGG | + | chr2_1:30760476-30760495 | Msa0204830:intron | 20.0% |
| !! | ACTAATTAGTGCTATATATT+TGG | - | chr2_1:30760613-30760632 | None:intergenic | 20.0% |
| !! | TATGCCGAAATAAATAAATA+AGG | - | chr2_1:30761140-30761159 | None:intergenic | 20.0% |
| !! | AAAAAAAAAATTAAACCACG+CGG | - | chr2_1:30761177-30761196 | None:intergenic | 20.0% |
| !! | GATCAACTATTAAAAAGATA+TGG | + | chr2_1:30761473-30761492 | Msa0204830:intron | 20.0% |
| !! | AGACTCATTTATAAATACTT+CGG | - | chr2_1:30761788-30761807 | None:intergenic | 20.0% |
| !! | TCAGTAACTCTATATATTTA+TGG | + | chr2_1:30762353-30762372 | Msa0204830:intron | 20.0% |
| !! | CAGTAACTCTATATATTTAT+GGG | + | chr2_1:30762354-30762373 | Msa0204830:intron | 20.0% |
| !!! | ATATTTTAAATTGTTCCTCA+TGG | - | chr2_1:30762387-30762406 | None:intergenic | 20.0% |
| !! | AAAATTTATTTCACACTCTT+AGG | - | chr2_1:30762488-30762507 | None:intergenic | 20.0% |
| !! | AGAAACAAAAAATATGAATG+TGG | - | chr2_1:30763031-30763050 | None:intergenic | 20.0% |
| !!! | CAACTAATAAATACTTTTTC+AGG | - | chr2_1:30763187-30763206 | None:intergenic | 20.0% |
| !!! | AAATTAACCTTATTTAGTGT+TGG | + | chr2_1:30763286-30763305 | Msa0204830:intron | 20.0% |
| !! | GAACATGCATTATTATATAT+AGG | + | chr2_1:30763440-30763459 | Msa0204830:intron | 20.0% |
| !! | CTCAATTGAAAAGAATAAAA+AGG | - | chr2_1:30763728-30763747 | None:intergenic | 20.0% |
| !!! | CTTTTTATTCTTTTCAATTG+AGG | + | chr2_1:30763726-30763745 | Msa0204830:intron | 20.0% |
| !!! | TATTTGATTCAAGAATTTTG+AGG | + | chr2_1:30763753-30763772 | Msa0204830:intron | 20.0% |
| !! | AGAAATTTACTTATTACTAG+TGG | + | chr2_1:30763818-30763837 | Msa0204830:intron | 20.0% |
| !! | ATTATAACTTATCATGGATA+TGG | + | chr2_1:30764089-30764108 | Msa0204830:intron | 20.0% |
| !!! | AATGAGGTATTATTTTTTAG+GGG | - | chr2_1:30764151-30764170 | None:intergenic | 20.0% |
| !! | TATTACAATGACAAATAATG+AGG | - | chr2_1:30764167-30764186 | None:intergenic | 20.0% |
| !!! | TTTTAATTCAAAATTAGGGA+AGG | + | chr2_1:30764272-30764291 | Msa0204830:intron | 20.0% |
| !! | TTTAATTCAAAATTAGGGAA+GGG | + | chr2_1:30764273-30764292 | Msa0204830:intron | 20.0% |
| !!! | GTTTTATCCTTTTTATTTTC+AGG | + | chr2_1:30764379-30764398 | Msa0204830:intron | 20.0% |
| ! | ATTCCATCACTATATATACT+AGG | + | chr2_1:30756124-30756143 | Msa0204830:five_prime_UTR | 25.0% |
| ! | TGATTGAAAGAAATTTAAGG+TGG | - | chr2_1:30756177-30756196 | None:intergenic | 25.0% |
| ! | GTTGTTAAAGTTGAAATTGA+AGG | - | chr2_1:30756229-30756248 | None:intergenic | 25.0% |
| ! | AATTTCAACTTTAACAACCA+TGG | + | chr2_1:30756231-30756250 | Msa0204830:exon | 25.0% |
| ! | ATAATTGAGATATATGGTTG+TGG | + | chr2_1:30756403-30756422 | Msa0204830:intron | 25.0% |
| !! | GTAAACATCACTAATTTTAG+CGG | + | chr2_1:30756598-30756617 | Msa0204830:intron | 25.0% |
| ! | AATTAGTACTACTCAATTTC+TGG | + | chr2_1:30756641-30756660 | Msa0204830:intron | 25.0% |
| ! | ATTAGTACTACTCAATTTCT+GGG | + | chr2_1:30756642-30756661 | Msa0204830:intron | 25.0% |
| ! | TTTGTTTGAATTAAGTGGTT+TGG | + | chr2_1:30756691-30756710 | Msa0204830:intron | 25.0% |
| ! | TTGTTTGAATTAAGTGGTTT+GGG | + | chr2_1:30756692-30756711 | Msa0204830:intron | 25.0% |
| !!! | TGTATTTTAGGATTTAAGTC+GGG | - | chr2_1:30756904-30756923 | None:intergenic | 25.0% |
| !!! | CTGTATTTTAGGATTTAAGT+CGG | - | chr2_1:30756905-30756924 | None:intergenic | 25.0% |
| !! | CGATAGATTTTGTCTATTTT+GGG | - | chr2_1:30756976-30756995 | None:intergenic | 25.0% |
| !! | TCGATAGATTTTGTCTATTT+TGG | - | chr2_1:30756977-30756996 | None:intergenic | 25.0% |
| ! | CGATATAGGAAATTGTAAAA+TGG | - | chr2_1:30757112-30757131 | None:intergenic | 25.0% |
| ! | AATTTCTTTCTAATGATGAG+TGG | + | chr2_1:30757336-30757355 | Msa0204830:intron | 25.0% |
| ! | GGATAAAGCTTCAATTATTA+AGG | + | chr2_1:30757380-30757399 | Msa0204830:CDS | 25.0% |
| !!! | AAACAACGTTCATTTTGAAA+CGG | - | chr2_1:30757818-30757837 | None:intergenic | 25.0% |
| ! | TTCAAAATGAACGTTGTTTA+AGG | + | chr2_1:30757819-30757838 | Msa0204830:intron | 25.0% |
| ! | TTAAGGTGGTGATTTATAAT+TGG | - | chr2_1:30758576-30758595 | None:intergenic | 25.0% |
| ! | TATAAATCACCACCTTAATA+AGG | + | chr2_1:30758578-30758597 | Msa0204830:intron | 25.0% |
| ! | ATAAATCACCACCTTAATAA+GGG | + | chr2_1:30758579-30758598 | Msa0204830:intron | 25.0% |
| !! | GCTAATATATTTTCTCTACT+AGG | - | chr2_1:30758630-30758649 | None:intergenic | 25.0% |
| ! | GGTCATTAACAAAAAAATAG+TGG | - | chr2_1:30758707-30758726 | None:intergenic | 25.0% |
| ! | AGATTATAGAAGAGATTGTA+AGG | + | chr2_1:30758746-30758765 | Msa0204830:intron | 25.0% |
| ! | TGAGTGTGTAATTTGATATA+TGG | + | chr2_1:30758868-30758887 | Msa0204830:intron | 25.0% |
| ! | TGTTAACTTAGCTATGTTTA+CGG | - | chr2_1:30759261-30759280 | None:intergenic | 25.0% |
| !!! | CATTTTAAGATGAATAAGTG+GGG | - | chr2_1:30759331-30759350 | None:intergenic | 25.0% |
| !!! | CACATTTTAAGATGAATAAG+TGG | - | chr2_1:30759333-30759352 | None:intergenic | 25.0% |
| !!! | GTTAAAATTCACTTTTTTCG+AGG | - | chr2_1:30759567-30759586 | None:intergenic | 25.0% |
| ! | AAGATATTACAGCTAGAATA+AGG | + | chr2_1:30759716-30759735 | Msa0204830:intron | 25.0% |
| ! | AGATATTACAGCTAGAATAA+GGG | + | chr2_1:30759717-30759736 | Msa0204830:intron | 25.0% |
| ! | AAGTGTTCATTGTTCAATTA+TGG | - | chr2_1:30759808-30759827 | None:intergenic | 25.0% |
| ! | TTAAAAAAGGGGAGAAATAA+GGG | + | chr2_1:30760103-30760122 | Msa0204830:intron | 25.0% |
| ! | TAGTTGTTAACATTTGATGA+AGG | - | chr2_1:30760150-30760169 | None:intergenic | 25.0% |
| !!! | TTCTAAAACGACACTTAAAA+AGG | - | chr2_1:30760184-30760203 | None:intergenic | 25.0% |
| !! | GATTAAAATGAGGGTATAAT+AGG | - | chr2_1:30760250-30760269 | None:intergenic | 25.0% |
| ! | AAAAAATAGGAAATTATCCG+TGG | - | chr2_1:30760272-30760291 | None:intergenic | 25.0% |
| ! | TAAAGTGTGTGCAAAAAAAT+AGG | - | chr2_1:30760285-30760304 | None:intergenic | 25.0% |
| ! | ACAAAAAAATCCGAATTTGT+TGG | - | chr2_1:30760363-30760382 | None:intergenic | 25.0% |
| ! | TAAATATTGTGCTTATCTCT+TGG | + | chr2_1:30760424-30760443 | Msa0204830:intron | 25.0% |
| ! | TATTGTTTACTTGGTATTTC+AGG | - | chr2_1:30760807-30760826 | None:intergenic | 25.0% |
| !! | GAAACACGTTTTCAAATTAT+TGG | - | chr2_1:30761103-30761122 | None:intergenic | 25.0% |
| !! | TTTTCTTCTTCGTCTAATAA+TGG | + | chr2_1:30761212-30761231 | Msa0204830:intron | 25.0% |
| !! | CATGCTATAATTTGCAAAAT+GGG | + | chr2_1:30761263-30761282 | Msa0204830:intron | 25.0% |
| !!! | AGTTTAAGTTAGTAGTGTTT+TGG | + | chr2_1:30761384-30761403 | Msa0204830:intron | 25.0% |
| !!! | GTTTAAGTTAGTAGTGTTTT+GGG | + | chr2_1:30761385-30761404 | Msa0204830:intron | 25.0% |
| !!! | TTTAAGTTAGTAGTGTTTTG+GGG | + | chr2_1:30761386-30761405 | Msa0204830:intron | 25.0% |
| !! | TGTCAAGATGAATATCTTTT+GGG | - | chr2_1:30761678-30761697 | None:intergenic | 25.0% |
| ! | CATTTGATAAAAAAAGCTGA+AGG | - | chr2_1:30762026-30762045 | None:intergenic | 25.0% |
| ! | AGAATAATCAATTTCAATGG+TGG | - | chr2_1:30762162-30762181 | None:intergenic | 25.0% |
| ! | ACCATTGAAATTGATTATTC+TGG | + | chr2_1:30762161-30762180 | Msa0204830:intron | 25.0% |
| ! | ACCAGAATAATCAATTTCAA+TGG | - | chr2_1:30762165-30762184 | None:intergenic | 25.0% |
| !! | TCTTTAATTTAATGTTGGTG+TGG | - | chr2_1:30762876-30762895 | None:intergenic | 25.0% |
| !! | TGTCCAATTTTATATTTCTC+AGG | + | chr2_1:30763053-30763072 | Msa0204830:intron | 25.0% |
| ! | TGCATTATTATATATAGGGT+TGG | + | chr2_1:30763445-30763464 | Msa0204830:intron | 25.0% |
| ! | GCATTATTATATATAGGGTT+GGG | + | chr2_1:30763446-30763465 | Msa0204830:intron | 25.0% |
| ! | CATTATTATATATAGGGTTG+GGG | + | chr2_1:30763447-30763466 | Msa0204830:intron | 25.0% |
| !!! | TTTTTCAAGGTGAATAACTA+GGG | - | chr2_1:30763488-30763507 | None:intergenic | 25.0% |
| !!! | TTTTTTTGTCAAGTAGTCTA+GGG | - | chr2_1:30763524-30763543 | None:intergenic | 25.0% |
| !!! | TTTTTTTTGTCAAGTAGTCT+AGG | - | chr2_1:30763525-30763544 | None:intergenic | 25.0% |
| !! | TTTACTAAACCTTCTCTTTT+GGG | - | chr2_1:30763683-30763702 | None:intergenic | 25.0% |
| !! | TTTTACTAAACCTTCTCTTT+TGG | - | chr2_1:30763684-30763703 | None:intergenic | 25.0% |
| ! | TTATGACAAATCATTACTGA+AGG | + | chr2_1:30763972-30763991 | Msa0204830:intron | 25.0% |
| ! | TTAATTCAAAATTAGGGAAG+GGG | + | chr2_1:30764274-30764293 | Msa0204830:intron | 25.0% |
| ! | TCATTTGCCTGAAAATAAAA+AGG | - | chr2_1:30764389-30764408 | None:intergenic | 25.0% |
| !!! | TTTTTATTTTCAGGCAAATG+AGG | + | chr2_1:30764388-30764407 | Msa0204830:intron | 25.0% |
| !! | ACGGAATGAACAATTTTAAA+AGG | - | chr2_1:30764516-30764535 | None:intergenic | 25.0% |
| ! | CTATAAATAAGCACTTCATT+AGG | - | chr2_1:30764674-30764693 | None:intergenic | 25.0% |
| ! | ATCCTATACTTATATACTAG+TGG | - | chr2_1:30764711-30764730 | None:intergenic | 25.0% |
| ! | AGTATATAAGTATAGGATTG+AGG | + | chr2_1:30764713-30764732 | Msa0204830:three_prime_UTR | 25.0% |
| TTGCCTAGTATATATAGTGA+TGG | - | chr2_1:30756130-30756149 | None:intergenic | 30.0% | |
| !! | TTTAAGGTGGTTGGTTTATT+TGG | - | chr2_1:30756164-30756183 | None:intergenic | 30.0% |
| ! | TGAAAGAAATTTAAGGTGGT+TGG | - | chr2_1:30756173-30756192 | None:intergenic | 30.0% |
| TCACTTTGATTCAAGTATGA+AGG | + | chr2_1:30756342-30756361 | Msa0204830:intron | 30.0% | |
| TGTTTACCTTGCTAATGTTT+GGG | - | chr2_1:30756585-30756604 | None:intergenic | 30.0% | |
| ATGTTTACCTTGCTAATGTT+TGG | - | chr2_1:30756586-30756605 | None:intergenic | 30.0% | |
| CGACTTAAATCCTAAAATAC+AGG | + | chr2_1:30756903-30756922 | Msa0204830:intron | 30.0% | |
| AAAATGGCAATCAAAATCGA+TGG | - | chr2_1:30757096-30757115 | None:intergenic | 30.0% | |
| ! | GACTTTTGTAGAATCGATAT+AGG | - | chr2_1:30757126-30757145 | None:intergenic | 30.0% |
| ! | AAATCGAAGGATTTTACTCA+AGG | - | chr2_1:30757148-30757167 | None:intergenic | 30.0% |
| AAAATCGCAATCAAAATCGA+AGG | - | chr2_1:30756993-30757012 | None:intergenic | 30.0% | |
| TTGATGTCTTTGACATCTAA+TGG | + | chr2_1:30757256-30757275 | Msa0204830:intron | 30.0% | |
| GGAAAATATCAACCATCATA+TGG | + | chr2_1:30757277-30757296 | Msa0204830:intron | 30.0% | |
| !!! | TAGTGACTTTTTTTTCCAGA+TGG | + | chr2_1:30757359-30757378 | Msa0204830:intron | 30.0% |
| ! | TAATTGAAGCTTTATCCATC+TGG | - | chr2_1:30757377-30757396 | None:intergenic | 30.0% |
| GATTATTCAAGCTGAGATAA+TGG | + | chr2_1:30757443-30757462 | Msa0204830:CDS | 30.0% | |
| !! | AGATAATGGAACTTGAATCT+GGG | + | chr2_1:30757457-30757476 | Msa0204830:CDS | 30.0% |
| !!! | GACACTCATTTTAAAACAGA+GGG | + | chr2_1:30758066-30758085 | Msa0204830:intron | 30.0% |
| AACAATGAAGTGTGAATCTA+AGG | - | chr2_1:30758142-30758161 | None:intergenic | 30.0% | |
| !! | TTCTGAAGTTTGATGATAAG+AGG | - | chr2_1:30758274-30758293 | None:intergenic | 30.0% |
| ! | TTTATAATTGGTTCTCAGCA+TGG | - | chr2_1:30758564-30758583 | None:intergenic | 30.0% |
| !! | AGTCTGATTTGGTATTTGAT+AGG | - | chr2_1:30758681-30758700 | None:intergenic | 30.0% |
| !! | AATAGTGGATAAGTCTGATT+TGG | - | chr2_1:30758692-30758711 | None:intergenic | 30.0% |
| GGAAGAAGAAAATGAATGTT+TGG | - | chr2_1:30759195-30759214 | None:intergenic | 30.0% | |
| GTTAACTTAGCTATGTTTAC+GGG | - | chr2_1:30759260-30759279 | None:intergenic | 30.0% | |
| ACATGCATTGTTATATGTAG+AGG | + | chr2_1:30759507-30759526 | Msa0204830:intron | 30.0% | |
| GTAAATAAGTAGAGTGTATG+AGG | - | chr2_1:30759545-30759564 | None:intergenic | 30.0% | |
| GATATTACAGCTAGAATAAG+GGG | + | chr2_1:30759718-30759737 | Msa0204830:intron | 30.0% | |
| ATATTACAGCTAGAATAAGG+GGG | + | chr2_1:30759719-30759738 | Msa0204830:intron | 30.0% | |
| !! | CTTTTCCACTTTTGTAAAAG+TGG | - | chr2_1:30759777-30759796 | None:intergenic | 30.0% |
| ! | CTTTTACAAAAGTGGAAAAG+TGG | + | chr2_1:30759777-30759796 | Msa0204830:intron | 30.0% |
| AAGTCAAGTAAAAAATAGGG+AGG | + | chr2_1:30760048-30760067 | Msa0204830:intron | 30.0% | |
| AAAATAGGGAGGAATAAGAT+TGG | + | chr2_1:30760059-30760078 | Msa0204830:intron | 30.0% | |
| GTTAAAAAAGGGGAGAAATA+AGG | + | chr2_1:30760102-30760121 | Msa0204830:intron | 30.0% | |
| AAACGACACTTAAAAAGGAA+CGG | - | chr2_1:30760735-30760754 | None:intergenic | 30.0% | |
| !! | TATACCCTCATTTTAATCCA+CGG | + | chr2_1:30760252-30760271 | Msa0204830:intron | 30.0% |
| ! | TTATCCGTGGATTAAAATGA+GGG | - | chr2_1:30760259-30760278 | None:intergenic | 30.0% |
| ! | ATTATCCGTGGATTAAAATG+AGG | - | chr2_1:30760260-30760279 | None:intergenic | 30.0% |
| CTTCATGGAACTATTATCAT+AGG | + | chr2_1:30760491-30760510 | Msa0204830:intron | 30.0% | |
| !!! | GTGTCGTTTTGGTATTTTAA+GGG | - | chr2_1:30760688-30760707 | None:intergenic | 30.0% |
| !!! | AGTGTCGTTTTGGTATTTTA+AGG | - | chr2_1:30760689-30760708 | None:intergenic | 30.0% |
| !!! | CCTTTTTAAGTGTCGTTTTA+GGG | - | chr2_1:30760181-30760200 | None:intergenic | 30.0% |
| !!! | TCCTTTTTAAGTGTCGTTTT+AGG | - | chr2_1:30760180-30760199 | None:intergenic | 30.0% |
| AAACGACACTTAAAAAGGAA+CGG | + | chr2_1:30760735-30760754 | Msa0204830:intron | 30.0% | |
| CTTCAAAATAGAACTCCATT+AGG | + | chr2_1:30760877-30760896 | Msa0204830:intron | 30.0% | |
| GCAAAGTTTACAAAACCTAA+TGG | - | chr2_1:30760895-30760914 | None:intergenic | 30.0% | |
| TGAATCAAAGTAGAAAAGAG+TGG | + | chr2_1:30760999-30761018 | Msa0204830:intron | 30.0% | |
| CACTAGTGATACATGAATTA+GGG | + | chr2_1:30761045-30761064 | Msa0204830:intron | 30.0% | |
| TCTAATAATGGCAAAATGTC+AGG | + | chr2_1:30761224-30761243 | Msa0204830:intron | 30.0% | |
| ! | GCATGCTATAATTTGCAAAA+TGG | + | chr2_1:30761262-30761281 | Msa0204830:intron | 30.0% |
| ! | CTGTCAAGATGAATATCTTT+TGG | - | chr2_1:30761679-30761698 | None:intergenic | 30.0% |
| CTTGTTAATAAGTGTTCTCT+AGG | + | chr2_1:30761806-30761825 | Msa0204830:intron | 30.0% | |
| ! | TGTTCTCTAGGAAATTGTTA+AGG | + | chr2_1:30761818-30761837 | Msa0204830:intron | 30.0% |
| CAACATGTGTTAATGAATGT+TGG | - | chr2_1:30762055-30762074 | None:intergenic | 30.0% | |
| !! | TTGATTTGCTACTGTATCTA+AGG | - | chr2_1:30762526-30762545 | None:intergenic | 30.0% |
| GCACCTGAGAAATATAAAAT+TGG | - | chr2_1:30763059-30763078 | None:intergenic | 30.0% | |
| GAATACACCAACACTAAATA+AGG | - | chr2_1:30763296-30763315 | None:intergenic | 30.0% | |
| CAAAATATGAAGTTCTATCG+TGG | - | chr2_1:30763393-30763412 | None:intergenic | 30.0% | |
| !!! | CTTTTTCAAGGTGAATAACT+AGG | - | chr2_1:30763489-30763508 | None:intergenic | 30.0% |
| CTAGTTATTCACCTTGAAAA+AGG | + | chr2_1:30763487-30763506 | Msa0204830:intron | 30.0% | |
| !! | GTTAGAATTCACCTTTTTCA+AGG | - | chr2_1:30763501-30763520 | None:intergenic | 30.0% |
| !!! | TTTTTTGTCAAGTAGTCTAG+GGG | - | chr2_1:30763523-30763542 | None:intergenic | 30.0% |
| TAAATTAGTCCCAAAAGAGA+AGG | + | chr2_1:30763671-30763690 | Msa0204830:intron | 30.0% | |
| !! | TCAGTAATGGATATTACTGA+GGG | + | chr2_1:30763877-30763896 | Msa0204830:intron | 30.0% |
| ATTATTCCCTCAGTAATTAC+TGG | + | chr2_1:30763995-30764014 | Msa0204830:intron | 30.0% | |
| TTATTCCCTCAGTAATTACT+GGG | + | chr2_1:30763996-30764015 | Msa0204830:intron | 30.0% | |
| ! | AAAATATATCTAGCTTGACG+TGG | + | chr2_1:30764230-30764249 | Msa0204830:intron | 30.0% |
| TAATTCAAAATTAGGGAAGG+GGG | + | chr2_1:30764275-30764294 | Msa0204830:intron | 30.0% | |
| AGCCACTAGTATATAAGTAT+AGG | + | chr2_1:30764706-30764725 | Msa0204830:three_prime_UTR | 30.0% | |
| TTAACAACCATGGAGAACAT+TGG | + | chr2_1:30756241-30756260 | Msa0204830:exon | 35.0% | |
| TGATGAGTACAAGCTTTACT+GGG | + | chr2_1:30756264-30756283 | Msa0204830:CDS | 35.0% | |
| TTGTTACCTATCAAGCTCTT+GGG | - | chr2_1:30756311-30756330 | None:intergenic | 35.0% | |
| ATTGTTACCTATCAAGCTCT+TGG | - | chr2_1:30756312-30756331 | None:intergenic | 35.0% | |
| ! | GTCGCAAAATCCTGTATTTT+AGG | - | chr2_1:30756916-30756935 | None:intergenic | 35.0% |
| TCGAAAGGGAATAGCAAAAT+CGG | - | chr2_1:30757191-30757210 | None:intergenic | 35.0% | |
| TAACCTAGGTTGTCAAAATC+GGG | - | chr2_1:30757227-30757246 | None:intergenic | 35.0% | |
| CTAACCTAGGTTGTCAAAAT+CGG | - | chr2_1:30757228-30757247 | None:intergenic | 35.0% | |
| !! | GAGATAATGGAACTTGAATC+TGG | + | chr2_1:30757456-30757475 | Msa0204830:CDS | 35.0% |
| TTTACCTCAAGGACTTCAAT+TGG | - | chr2_1:30757597-30757616 | None:intergenic | 35.0% | |
| TTGAAGTCCTTGAGGTAAAT+TGG | + | chr2_1:30757598-30757617 | Msa0204830:intron | 35.0% | |
| !!! | AACGTTCATTTTGAAACGGA+GGG | - | chr2_1:30757814-30757833 | None:intergenic | 35.0% |
| !!! | CGACACTCATTTTAAAACAG+AGG | + | chr2_1:30758065-30758084 | Msa0204830:intron | 35.0% |
| CTATATTTATTGTTGGGGGT+TGG | - | chr2_1:30758728-30758747 | None:intergenic | 35.0% | |
| GCATCAATAATACAAGAGAG+AGG | - | chr2_1:30758777-30758796 | None:intergenic | 35.0% | |
| ATACATGGGAGAGAATACAA+TGG | + | chr2_1:30758912-30758931 | Msa0204830:CDS | 35.0% | |
| TGAGCTTGACATGTAACAAA+AGG | + | chr2_1:30758938-30758957 | Msa0204830:CDS | 35.0% | |
| GAGCTTGACATGTAACAAAA+GGG | + | chr2_1:30758939-30758958 | Msa0204830:CDS | 35.0% | |
| TTTGAAGACAGTCTTCATTG+AGG | + | chr2_1:30759050-30759069 | Msa0204830:CDS | 35.0% | |
| GCATTGTTATATGTAGAGGT+CGG | + | chr2_1:30759511-30759530 | Msa0204830:intron | 35.0% | |
| CATTGTTATATGTAGAGGTC+GGG | + | chr2_1:30759512-30759531 | Msa0204830:intron | 35.0% | |
| ATTGTTATATGTAGAGGTCG+GGG | + | chr2_1:30759513-30759532 | Msa0204830:intron | 35.0% | |
| !!! | CTATTGATTTTGAAGCATGG+AGG | - | chr2_1:30759745-30759764 | None:intergenic | 35.0% |
| !!! | GGTCTATTGATTTTGAAGCA+TGG | - | chr2_1:30759748-30759767 | None:intergenic | 35.0% |
| ! | ACTTTTGTAAAAGTGGTGAG+CGG | - | chr2_1:30759770-30759789 | None:intergenic | 35.0% |
| CTCTCTTTCTCCAACAAATT+CGG | + | chr2_1:30760350-30760369 | Msa0204830:intron | 35.0% | |
| TACCAAAACGACACTTGAAT+AGG | + | chr2_1:30760694-30760713 | Msa0204830:intron | 35.0% | |
| !!! | TTCCTATTCAAGTGTCGTTT+TGG | - | chr2_1:30760699-30760718 | None:intergenic | 35.0% |
| CCCTAAAACGACACTTAAAA+AGG | + | chr2_1:30760730-30760749 | Msa0204830:intron | 35.0% | |
| !! | TTAGGGAGAGTGTATTCTTT+TGG | + | chr2_1:30760839-30760858 | Msa0204830:intron | 35.0% |
| TCTCTATTCTATGCTTGAGA+GGG | - | chr2_1:30760928-30760947 | None:intergenic | 35.0% | |
| ATCTCTATTCTATGCTTGAG+AGG | - | chr2_1:30760929-30760948 | None:intergenic | 35.0% | |
| ATCAAAGTAGAAAAGAGTGG+AGG | + | chr2_1:30761002-30761021 | Msa0204830:intron | 35.0% | |
| TCAAAGTAGAAAAGAGTGGA+GGG | + | chr2_1:30761003-30761022 | Msa0204830:intron | 35.0% | |
| CCTAATTCATGTATCACTAG+TGG | - | chr2_1:30761047-30761066 | None:intergenic | 35.0% | |
| CCACTAGTGATACATGAATT+AGG | + | chr2_1:30761044-30761063 | Msa0204830:intron | 35.0% | |
| !! | GGTTAACTTGTATCATGAGA+CGG | + | chr2_1:30761066-30761085 | Msa0204830:intron | 35.0% |
| !! | GTTAACTTGTATCATGAGAC+GGG | + | chr2_1:30761067-30761086 | Msa0204830:intron | 35.0% |
| AAAAATTAAACCACGCGGTA+AGG | - | chr2_1:30761172-30761191 | None:intergenic | 35.0% | |
| !! | TGACAAGGATTTTGCCATTT+TGG | - | chr2_1:30761329-30761348 | None:intergenic | 35.0% |
| ATATACACGCAGATATGACA+AGG | - | chr2_1:30761344-30761363 | None:intergenic | 35.0% | |
| !! | AAATGTTAACTTGTGCCCTT+GGG | - | chr2_1:30761655-30761674 | None:intergenic | 35.0% |
| TTCAAAGCTCATCAGAGTTA+GGG | + | chr2_1:30761735-30761754 | Msa0204830:intron | 35.0% | |
| ! | GGTGAAGAATCTTTTCTTTG+TGG | - | chr2_1:30761993-30762012 | None:intergenic | 35.0% |
| ATAAGTGTTCCACTCATTGT+GGG | - | chr2_1:30763216-30763235 | None:intergenic | 35.0% | |
| AATAAGTGTTCCACTCATTG+TGG | - | chr2_1:30763217-30763236 | None:intergenic | 35.0% | |
| GTGTTGGAGAGATAGATTTA+CGG | - | chr2_1:30763629-30763648 | None:intergenic | 35.0% | |
| TGCACAAAATCTGTCAGTAA+TGG | + | chr2_1:30763864-30763883 | Msa0204830:intron | 35.0% | |
| !! | GTCAGTAATGGATATTACTG+AGG | + | chr2_1:30763876-30763895 | Msa0204830:intron | 35.0% |
| AATGGATATTACTGAGGGAT+TGG | + | chr2_1:30763882-30763901 | Msa0204830:intron | 35.0% | |
| ACTGATGTCAGTATTACTGA+GGG | - | chr2_1:30763911-30763930 | None:intergenic | 35.0% | |
| TACTGATGTCAGTATTACTG+AGG | - | chr2_1:30763912-30763931 | None:intergenic | 35.0% | |
| ACTGACATCAGTATTGTTAC+TGG | + | chr2_1:30763919-30763938 | Msa0204830:intron | 35.0% | |
| TATTCCCTCAGTAATTACTG+GGG | + | chr2_1:30763997-30764016 | Msa0204830:intron | 35.0% | |
| CTCACGTTGGACATAATTAA+CGG | - | chr2_1:30764535-30764554 | None:intergenic | 35.0% | |
| CACGTGAATGAGCAATAAAA+GGG | + | chr2_1:30764634-30764653 | Msa0204830:intron | 35.0% | |
| CTATGAAAATACGAAAGCCA+CGG | - | chr2_1:30764741-30764760 | None:intergenic | 35.0% | |
| GTGATGAGTACAAGCTTTAC+TGG | + | chr2_1:30756263-30756282 | Msa0204830:CDS | 40.0% | |
| !!! | GATTGGATGAGGCTTTTTCA+GGG | + | chr2_1:30756437-30756456 | Msa0204830:CDS | 40.0% |
| CTAAGAACATTGTCTCTGAG+AGG | + | chr2_1:30756509-30756528 | Msa0204830:CDS | 40.0% | |
| ! | ACATTGTCTCTGAGAGGAAT+AGG | + | chr2_1:30756515-30756534 | Msa0204830:CDS | 40.0% |
| CGAAAGGGAATAGCAAAATC+GGG | - | chr2_1:30757190-30757209 | None:intergenic | 40.0% | |
| GACTTTACTTCAGGTCGAAA+GGG | - | chr2_1:30757205-30757224 | None:intergenic | 40.0% | |
| CAAAATCGGGACTTTACTTC+AGG | - | chr2_1:30757214-30757233 | None:intergenic | 40.0% | |
| ATCAATCGAACGTCTAACCT+AGG | - | chr2_1:30757241-30757260 | None:intergenic | 40.0% | |
| CTGATCTGTTCTCTTCTTCT+TGG | - | chr2_1:30757544-30757563 | None:intergenic | 40.0% | |
| CTTTCCAATTGAAGTCCTTG+AGG | + | chr2_1:30757590-30757609 | Msa0204830:CDS | 40.0% | |
| GAGATGATGATAGAGACAGT+GGG | - | chr2_1:30757624-30757643 | None:intergenic | 40.0% | |
| AGAGATGATGATAGAGACAG+TGG | - | chr2_1:30757625-30757644 | None:intergenic | 40.0% | |
| ATCACTGAGCTCACAACTTA+TGG | + | chr2_1:30757690-30757709 | Msa0204830:intron | 40.0% | |
| CCAAGTTATGTGTGAGTCAA+TGG | - | chr2_1:30757717-30757736 | None:intergenic | 40.0% | |
| !! | CCATTGACTCACACATAACT+TGG | + | chr2_1:30757714-30757733 | Msa0204830:intron | 40.0% |
| !!! | TTCATTTTGAAACGGAGGGA+TGG | - | chr2_1:30757810-30757829 | None:intergenic | 40.0% |
| !!! | CAACGTTCATTTTGAAACGG+AGG | - | chr2_1:30757815-30757834 | None:intergenic | 40.0% |
| AATGGTAGCCCTTATTAAGG+TGG | - | chr2_1:30758590-30758609 | None:intergenic | 40.0% | |
| TATATGGTTGAGTGCAGCTT+AGG | + | chr2_1:30758884-30758903 | Msa0204830:intron | 40.0% | |
| ATATGGTTGAGTGCAGCTTA+GGG | + | chr2_1:30758885-30758904 | Msa0204830:intron | 40.0% | |
| CAGCTTAGGGTTACATACAT+GGG | + | chr2_1:30758898-30758917 | Msa0204830:intron | 40.0% | |
| TAACAAAAGGGCAGACACAA+TGG | + | chr2_1:30758951-30758970 | Msa0204830:CDS | 40.0% | |
| ! | CTTTTGTAAAAGTGGTGAGC+GGG | - | chr2_1:30759769-30759788 | None:intergenic | 40.0% |
| !! | GCTCACCACTTTTACAAAAG+TGG | + | chr2_1:30759769-30759788 | Msa0204830:intron | 40.0% |
| GGTACTTAACTCGAATGTTC+TGG | - | chr2_1:30759863-30759882 | None:intergenic | 40.0% | |
| AATGGGAGAAATTACACACG+TGG | - | chr2_1:30759884-30759903 | None:intergenic | 40.0% | |
| AGGGAGGAATAAGATTGGTA+TGG | + | chr2_1:30760064-30760083 | Msa0204830:intron | 40.0% | |
| GACACTTAAAAAGGAACGGA+TGG | + | chr2_1:30760739-30760758 | Msa0204830:intron | 40.0% | |
| !!! | GGATTTTGCCATTTTGGTGT+GGG | - | chr2_1:30761323-30761342 | None:intergenic | 40.0% |
| !!! | AGGATTTTGCCATTTTGGTG+TGG | - | chr2_1:30761324-30761343 | None:intergenic | 40.0% |
| !! | TCATGTTAACTTGTGCCCTT+AGG | + | chr2_1:30761497-30761516 | Msa0204830:intron | 40.0% |
| !! | CATGTTAACTTGTGCCCTTA+GGG | + | chr2_1:30761498-30761517 | Msa0204830:intron | 40.0% |
| !! | TTCCTTAACTTGTGCCCTAA+GGG | - | chr2_1:30761515-30761534 | None:intergenic | 40.0% |
| TTCCTTAACTTATGCCCCAA+GGG | + | chr2_1:30761637-30761656 | Msa0204830:intron | 40.0% | |
| !! | AATGTTAACTTGTGCCCTTG+GGG | - | chr2_1:30761654-30761673 | None:intergenic | 40.0% |
| !! | GAAATGTTAACTTGTGCCCT+TGG | - | chr2_1:30761656-30761675 | None:intergenic | 40.0% |
| CTTCAAAGCTCATCAGAGTT+AGG | + | chr2_1:30761734-30761753 | Msa0204830:intron | 40.0% | |
| ! | CAGAGTTAGGGTTGATTTCA+AGG | + | chr2_1:30761747-30761766 | Msa0204830:intron | 40.0% |
| AAAGCTGAAGGTCGTTATCA+AGG | - | chr2_1:30762014-30762033 | None:intergenic | 40.0% | |
| TTTATGGGCAAGTTTCCATG+AGG | + | chr2_1:30762369-30762388 | Msa0204830:intron | 40.0% | |
| TTGATATGTCCCACAATGAG+TGG | + | chr2_1:30763204-30763223 | Msa0204830:intron | 40.0% | |
| TCAAGTAACCCTATTGTGGA+TGG | + | chr2_1:30763776-30763795 | Msa0204830:intron | 40.0% | |
| TGCTAAGACCATCCACAATA+GGG | - | chr2_1:30763787-30763806 | None:intergenic | 40.0% | |
| ATGCTAAGACCATCCACAAT+AGG | - | chr2_1:30763788-30763807 | None:intergenic | 40.0% | |
| TTGTGCATTACTGAGTCTCA+AGG | - | chr2_1:30763851-30763870 | None:intergenic | 40.0% | |
| GACATCAGTATTGTTACTGG+CGG | + | chr2_1:30763922-30763941 | Msa0204830:intron | 40.0% | |
| ! | GCGGAATTTTCCCTCAATAA+CGG | + | chr2_1:30763941-30763960 | Msa0204830:intron | 40.0% |
| !! | ATTTTCCCTCAATAACGGAG+AGG | + | chr2_1:30763946-30763965 | Msa0204830:intron | 40.0% |
| AACTACCTCTCCGTTATTGA+GGG | - | chr2_1:30763954-30763973 | None:intergenic | 40.0% | |
| TAACTACCTCTCCGTTATTG+AGG | - | chr2_1:30763955-30763974 | None:intergenic | 40.0% | |
| ATTCCCTCAGTAATTACTGG+GGG | + | chr2_1:30763998-30764017 | Msa0204830:intron | 40.0% | |
| CCCTTCATTAGATGCTCATA+GGG | - | chr2_1:30764478-30764497 | None:intergenic | 40.0% | |
| CCCTATGAGCATCTAATGAA+GGG | + | chr2_1:30764475-30764494 | Msa0204830:exon | 40.0% | |
| TCCCTTCATTAGATGCTCAT+AGG | - | chr2_1:30764479-30764498 | None:intergenic | 40.0% | |
| GAACATGAGTTAACTCACGT+TGG | - | chr2_1:30764548-30764567 | None:intergenic | 40.0% | |
| GCACGTGAATGAGCAATAAA+AGG | + | chr2_1:30764633-30764652 | Msa0204830:intron | 40.0% | |
| CTCATCACCAATGTTCTCCA+TGG | - | chr2_1:30756251-30756270 | None:intergenic | 45.0% | |
| TTGGGTTTGGAGGAACATGT+TGG | - | chr2_1:30756293-30756312 | None:intergenic | 45.0% | |
| TATCAAGCTCTTGGGTTTGG+AGG | - | chr2_1:30756303-30756322 | None:intergenic | 45.0% | |
| TCCAAACCCAAGAGCTTGAT+AGG | + | chr2_1:30756302-30756321 | Msa0204830:CDS | 45.0% | |
| ACCTATCAAGCTCTTGGGTT+TGG | - | chr2_1:30756306-30756325 | None:intergenic | 45.0% | |
| TATATGGTTGTGGTTGCAGC+TGG | + | chr2_1:30756413-30756432 | Msa0204830:intron | 45.0% | |
| ATATGGTTGTGGTTGCAGCT+GGG | + | chr2_1:30756414-30756433 | Msa0204830:intron | 45.0% | |
| !! | GGATTGGATGAGGCTTTTTC+AGG | + | chr2_1:30756436-30756455 | Msa0204830:CDS | 45.0% |
| TATGATTCAAGCTCCCCAGA+TGG | + | chr2_1:30756463-30756482 | Msa0204830:CDS | 45.0% | |
| ! | TTGTCTCTGAGAGGAATAGG+AGG | + | chr2_1:30756518-30756537 | Msa0204830:CDS | 45.0% |
| ACTCTTTGCACTTAGAGCAG+TGG | + | chr2_1:30756558-30756577 | Msa0204830:CDS | 45.0% | |
| AGTGGTCCCAAACATTAGCA+AGG | + | chr2_1:30756576-30756595 | Msa0204830:CDS | 45.0% | |
| GGACTTTACTTCAGGTCGAA+AGG | - | chr2_1:30757206-30757225 | None:intergenic | 45.0% | |
| !! | AGTCCCGATTTTGACAACCT+AGG | + | chr2_1:30757221-30757240 | Msa0204830:intron | 45.0% |
| ! | AAGAGCTTCCTGTGTTGCTA+AGG | + | chr2_1:30757517-30757536 | Msa0204830:CDS | 45.0% |
| TTCTTGGACCTTAGCAACAC+AGG | - | chr2_1:30757528-30757547 | None:intergenic | 45.0% | |
| GGCAATGGTAGCCCTTATTA+AGG | - | chr2_1:30758593-30758612 | None:intergenic | 45.0% | |
| ! | TTCTCTACTAGGGTACCTGA+TGG | - | chr2_1:30758619-30758638 | None:intergenic | 45.0% |
| GCAGCTTAGGGTTACATACA+TGG | + | chr2_1:30758897-30758916 | Msa0204830:intron | 45.0% | |
| ! | GCCAACATCACCTCTTTTTC+AGG | + | chr2_1:30759021-30759040 | Msa0204830:CDS | 45.0% |
| GCCTGAAAAAGAGGTGATGT+TGG | - | chr2_1:30759025-30759044 | None:intergenic | 45.0% | |
| !!! | ACATCACCTCTTTTTCAGGC+AGG | + | chr2_1:30759025-30759044 | Msa0204830:CDS | 45.0% |
| CAAAAGCCTGCCTGAAAAAG+AGG | - | chr2_1:30759034-30759053 | None:intergenic | 45.0% | |
| ! | ATGAATAAGTGGGGTGTCTG+TGG | - | chr2_1:30759322-30759341 | None:intergenic | 45.0% |
| TGTGAGCATAGCTCAGTTGA+CGG | + | chr2_1:30759482-30759501 | Msa0204830:intron | 45.0% | |
| ATGTGAGAAAGGAGTGGCTT+TGG | - | chr2_1:30761298-30761317 | None:intergenic | 45.0% | |
| TCACATCACCCACACCAAAA+TGG | + | chr2_1:30761312-30761331 | Msa0204830:intron | 45.0% | |
| !!! | TAGTGTTTTGGGGCTCGTTA+GGG | + | chr2_1:30761396-30761415 | Msa0204830:intron | 45.0% |
| !! | GTTCCTTAACTTGTGCCCTA+AGG | - | chr2_1:30761516-30761535 | None:intergenic | 45.0% |
| GTTCCTTAACTTATGCCCCA+AGG | + | chr2_1:30761636-30761655 | Msa0204830:intron | 45.0% | |
| !! | TGAGAGTGCTCTCAAAGCAT+TGG | - | chr2_1:30761950-30761969 | None:intergenic | 45.0% |
| ! | CCAACTGATTTACACTCACG+TGG | - | chr2_1:30763417-30763436 | None:intergenic | 45.0% |
| CCACGTGAGTGTAAATCAGT+TGG | + | chr2_1:30763414-30763433 | Msa0204830:intron | 45.0% | |
| GTGAGTGTAAATCAGTTGGC+AGG | + | chr2_1:30763418-30763437 | Msa0204830:intron | 45.0% | |
| ! | AGGTGAATAACTAGGGTGTC+TGG | - | chr2_1:30763481-30763500 | None:intergenic | 45.0% |
| GAGGTCAAGTAACCCTATTG+TGG | + | chr2_1:30763772-30763791 | Msa0204830:intron | 45.0% | |
| GTTCCCCCAGTAATTACTGA+GGG | - | chr2_1:30764004-30764023 | None:intergenic | 45.0% | |
| TGTTCCCCCAGTAATTACTG+AGG | - | chr2_1:30764005-30764024 | None:intergenic | 45.0% | |
| AGGGTCATTAAGAGCTGCAA+TGG | - | chr2_1:30764450-30764469 | None:intergenic | 45.0% | |
| AGATGCTCATAGGGCTTAGA+GGG | - | chr2_1:30764469-30764488 | None:intergenic | 45.0% | |
| TAGATGCTCATAGGGCTTAG+AGG | - | chr2_1:30764470-30764489 | None:intergenic | 45.0% | |
| GCCCTATGAGCATCTAATGA+AGG | + | chr2_1:30764474-30764493 | Msa0204830:exon | 45.0% | |
| TAGCGTGAGTTAACTCACGT+AGG | + | chr2_1:30764611-30764630 | Msa0204830:intron | 45.0% | |
| AGTATAGGATTGAGGAACCG+TGG | + | chr2_1:30764721-30764740 | Msa0204830:three_prime_UTR | 45.0% | |
| !! | AATTACTAATAAATAATTAA+TGG | - | chr2_1:30756625-30756644 | None:intergenic | 5.0% |
| !!! | TATTTATATTTTATTATAGA+CGG | + | chr2_1:30756800-30756819 | Msa0204830:intron | 5.0% |
| !!! | ATATTTAGTATTAATTTTTT+TGG | + | chr2_1:30757063-30757082 | Msa0204830:intron | 5.0% |
| !!! | TATTTAGTATTAATTTTTTT+GGG | + | chr2_1:30757064-30757083 | Msa0204830:intron | 5.0% |
| !!! | TTTTTTTTTTTTTTTTAAGA+TGG | - | chr2_1:30758224-30758243 | None:intergenic | 5.0% |
| !!! | AATATATATTTTTAATAAAG+AGG | - | chr2_1:30759138-30759157 | None:intergenic | 5.0% |
| !!! | GATAATTTTTAAAATAAAAT+TGG | - | chr2_1:30759656-30759675 | None:intergenic | 5.0% |
| !!! | ATTTTATTTTAAAAATTATC+AGG | + | chr2_1:30759656-30759675 | Msa0204830:intron | 5.0% |
| !! | ACAATAATTTAATAATATTT+AGG | + | chr2_1:30760821-30760840 | Msa0204830:intron | 5.0% |
| !! | CAATAATTTAATAATATTTA+GGG | + | chr2_1:30760822-30760841 | Msa0204830:intron | 5.0% |
| !!! | GTTTTTTTTTTTTTTTTTTT+GGG | - | chr2_1:30762423-30762442 | None:intergenic | 5.0% |
| !!! | TGTTTTTTTTTTTTTTTTTT+TGG | - | chr2_1:30762424-30762443 | None:intergenic | 5.0% |
| !! | TCAATTAAATTTAATATTTA+AGG | - | chr2_1:30762745-30762764 | None:intergenic | 5.0% |
| !!! | ATTTTTTTAATTCAAAATTA+GGG | + | chr2_1:30764268-30764287 | Msa0204830:intron | 5.0% |
| TATGGTTGTGGTTGCAGCTG+GGG | + | chr2_1:30756415-30756434 | Msa0204830:intron | 50.0% | |
| ! | TGATGATGCTGCACCATCTG+GGG | - | chr2_1:30756479-30756498 | None:intergenic | 50.0% |
| ! | CTGATGATGCTGCACCATCT+GGG | - | chr2_1:30756480-30756499 | None:intergenic | 50.0% |
| CAGTGGGCCAATTTACCTCA+AGG | - | chr2_1:30757608-30757627 | None:intergenic | 50.0% | |
| ! | TACTAGGGTACCTGATGGTG+TGG | - | chr2_1:30758614-30758633 | None:intergenic | 50.0% |
| TAAACCACGCGGTAAGGTCT+TGG | - | chr2_1:30761166-30761185 | None:intergenic | 50.0% | |
| !! | AAAGGAGTGGCTTTGGTGGA+AGG | - | chr2_1:30761291-30761310 | None:intergenic | 50.0% |
| !! | TGAGAAAGGAGTGGCTTTGG+TGG | - | chr2_1:30761295-30761314 | None:intergenic | 50.0% |
| TGGGTGATGTGAGAAAGGAG+TGG | - | chr2_1:30761304-30761323 | None:intergenic | 50.0% | |
| TGGTGTGGGTGATGTGAGAA+AGG | - | chr2_1:30761309-30761328 | None:intergenic | 50.0% | |
| !!! | GTAGTGTTTTGGGGCTCGTT+AGG | + | chr2_1:30761395-30761414 | Msa0204830:intron | 50.0% |
| TGCCCTTAGGGCACAAGTTA+AGG | + | chr2_1:30761510-30761529 | Msa0204830:intron | 50.0% | |
| TGCCCTTGGGGCATAAGTTA+AGG | - | chr2_1:30761642-30761661 | None:intergenic | 50.0% | |
| TTGTGGTTGCAGCTGGGGAT+TGG | + | chr2_1:30756420-30756439 | Msa0204830:intron | 55.0% | |
| TTGCAGCTGGGGATTGGATG+AGG | + | chr2_1:30756426-30756445 | Msa0204830:intron | 55.0% | |
| ! | CCTGATGATGCTGCACCATC+TGG | - | chr2_1:30756481-30756500 | None:intergenic | 55.0% |
| CCAGATGGTGCAGCATCATC+AGG | + | chr2_1:30756478-30756497 | Msa0204830:CDS | 55.0% | |
| GCTACCATTGCCACACCATC+AGG | + | chr2_1:30758601-30758620 | Msa0204830:intron | 55.0% | |
| ! | GGTACCTGATGGTGTGGCAA+TGG | - | chr2_1:30758608-30758627 | None:intergenic | 55.0% |
| ATGACCAAGACCTTACCGCG+TGG | + | chr2_1:30761159-30761178 | Msa0204830:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 30756115 | 30764844 | 30756115 | ID=Msa0204830;Name=Msa0204830 |
| chr2_1 | mRNA | 30756115 | 30764844 | 30756115 | ID=Msa0204830-mRNA-1;Parent=Msa0204830;Name=Msa0204830-mRNA-1;_AED=0.17;_eAED=0.17;_QI=135|1|1|1|0.8|0.66|6|169|244 |
| chr2_1 | exon | 30756115 | 30756323 | 30756115 | ID=Msa0204830-mRNA-1:exon:10857;Parent=Msa0204830-mRNA-1 |
| chr2_1 | exon | 30756432 | 30756597 | 30756432 | ID=Msa0204830-mRNA-1:exon:10858;Parent=Msa0204830-mRNA-1 |
| chr2_1 | exon | 30757378 | 30757611 | 30757378 | ID=Msa0204830-mRNA-1:exon:10859;Parent=Msa0204830-mRNA-1 |
| chr2_1 | exon | 30758901 | 30759071 | 30758901 | ID=Msa0204830-mRNA-1:exon:10860;Parent=Msa0204830-mRNA-1 |
| chr2_1 | exon | 30764401 | 30764495 | 30764401 | ID=Msa0204830-mRNA-1:exon:10861;Parent=Msa0204830-mRNA-1 |
| chr2_1 | exon | 30764681 | 30764844 | 30764681 | ID=Msa0204830-mRNA-1:exon:10862;Parent=Msa0204830-mRNA-1 |
| chr2_1 | five_prime_UTR | 30756115 | 30756249 | 30756115 | ID=Msa0204830-mRNA-1:five_prime_utr;Parent=Msa0204830-mRNA-1 |
| chr2_1 | CDS | 30756250 | 30756323 | 30756250 | ID=Msa0204830-mRNA-1:cds;Parent=Msa0204830-mRNA-1 |
| chr2_1 | CDS | 30756432 | 30756597 | 30756432 | ID=Msa0204830-mRNA-1:cds;Parent=Msa0204830-mRNA-1 |
| chr2_1 | CDS | 30757378 | 30757611 | 30757378 | ID=Msa0204830-mRNA-1:cds;Parent=Msa0204830-mRNA-1 |
| chr2_1 | CDS | 30758901 | 30759071 | 30758901 | ID=Msa0204830-mRNA-1:cds;Parent=Msa0204830-mRNA-1 |
| chr2_1 | CDS | 30764401 | 30764490 | 30764401 | ID=Msa0204830-mRNA-1:cds;Parent=Msa0204830-mRNA-1 |
| chr2_1 | three_prime_UTR | 30764491 | 30764495 | 30764491 | ID=Msa0204830-mRNA-1:three_prime_utr;Parent=Msa0204830-mRNA-1 |
| chr2_1 | three_prime_UTR | 30764681 | 30764844 | 30764681 | ID=Msa0204830-mRNA-1:three_prime_utr;Parent=Msa0204830-mRNA-1 |
| Gene Sequence |
| Protein sequence |
