Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0331970 | XP_003595077.1 | 94.262 | 244 | 14 | 0 | 1 | 244 | 1 | 244 | 5.51e-169 | 476 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0331970 | sp|Q2HIV9|BH035_ARATH | 62.449 | 245 | 83 | 6 | 1 | 241 | 1 | 240 | 2.03e-94 | 280 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0331970 | TF | bHLH |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0043740 | Msa0331970 | 0.807892 | 4.047372e-50 | -8.615850e-47 |
| Msa0090090 | Msa0331970 | 0.811466 | 6.903012e-51 | -8.615850e-47 |
| Msa0137560 | Msa0331970 | 0.804239 | 2.377034e-49 | -8.615850e-47 |
| Msa0189600 | Msa0331970 | 0.803071 | 4.152344e-49 | -8.615850e-47 |
| Msa0204820 | Msa0331970 | 0.824915 | 6.229957e-54 | -8.615850e-47 |
| Msa0204830 | Msa0331970 | 0.974809 | 8.173728e-139 | -8.615850e-47 |
| Msa0244890 | Msa0331970 | 0.905229 | 5.349724e-80 | -8.615850e-47 |
| Msa0244900 | Msa0331970 | 0.832771 | 7.817789e-56 | -8.615850e-47 |
| Msa0254260 | Msa0331970 | 0.807132 | 5.867546e-50 | -8.615850e-47 |
| Msa0271540 | Msa0331970 | 0.811869 | 5.640507e-51 | -8.615850e-47 |
| Msa0283480 | Msa0331970 | 0.805076 | 1.589839e-49 | -8.615850e-47 |
| Msa0283490 | Msa0331970 | 0.889160 | 3.104630e-73 | -8.615850e-47 |
| Msa0319270 | Msa0331970 | 0.802154 | 6.418459e-49 | -8.615850e-47 |
| Msa0331970 | Msa0511780 | 0.803384 | 3.577305e-49 | -8.615850e-47 |
| Msa0331970 | Msa0567380 | 0.824142 | 9.471818e-54 | -8.615850e-47 |
| Msa0331970 | Msa0567440 | 0.802769 | 4.793847e-49 | -8.615850e-47 |
| Msa0331970 | Msa0614380 | 0.807811 | 4.211332e-50 | -8.615850e-47 |
| Msa0331970 | Msa0734250 | 0.808256 | 3.387147e-50 | -8.615850e-47 |
| Msa0331970 | Msa0813160 | 0.808145 | 3.575964e-50 | -8.615850e-47 |
| Msa0331970 | Msa0853590 | 0.800964 | 1.125715e-48 | -8.615850e-47 |
| Msa0331970 | Msa0945030 | 0.810850 | 9.390162e-51 | -8.615850e-47 |
| Msa0331970 | Msa1029870 | 0.807823 | 4.187708e-50 | -8.615850e-47 |
| Msa0331970 | Msa1068720 | 0.803353 | 3.629742e-49 | -8.615850e-47 |
| Msa0331970 | Msa1156720 | 0.804213 | 2.406286e-49 | -8.615850e-47 |
| Msa0331970 | Msa1160530 | 0.801549 | 8.545323e-49 | -8.615850e-47 |
| Msa0331970 | Msa1439650 | 0.916747 | 1.227820e-85 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0331970 | MtrunA17_Chr2g0298751 | 94.262 | 244 | 14 | 0 | 1 | 244 | 1 | 244 | 5.07e-173 | 476 |
| Msa0331970 | MtrunA17_Chr8g0365711 | 32.353 | 170 | 107 | 2 | 51 | 220 | 243 | 404 | 1.13e-23 | 98.6 |
| Msa0331970 | MtrunA17_Chr1g0211081 | 32.911 | 237 | 128 | 7 | 6 | 213 | 258 | 492 | 3.77e-22 | 94.7 |
| Msa0331970 | MtrunA17_Chr2g0320291 | 28.796 | 191 | 113 | 5 | 51 | 236 | 132 | 304 | 5.14e-19 | 84.3 |
| Msa0331970 | MtrunA17_Chr7g0252041 | 32.632 | 190 | 115 | 6 | 49 | 232 | 283 | 465 | 8.94e-18 | 82.0 |
| Msa0331970 | MtrunA17_Chr3g0131691 | 30.481 | 187 | 122 | 5 | 48 | 232 | 294 | 474 | 1.12e-17 | 81.6 |
| Msa0331970 | MtrunA17_Chr4g0028071 | 31.098 | 164 | 96 | 3 | 51 | 211 | 148 | 297 | 7.14e-17 | 78.6 |
| Msa0331970 | MtrunA17_Chr7g0260841 | 30.286 | 175 | 85 | 4 | 53 | 227 | 356 | 493 | 1.39e-14 | 72.8 |
| Msa0331970 | MtrunA17_Chr7g0275821 | 27.219 | 169 | 92 | 4 | 53 | 216 | 253 | 395 | 3.59e-14 | 71.2 |
| Msa0331970 | MtrunA17_Chr4g0049331 | 28.049 | 164 | 101 | 4 | 53 | 214 | 136 | 284 | 8.98e-14 | 69.3 |
| Msa0331970 | MtrunA17_Chr8g0366751 | 29.487 | 156 | 96 | 3 | 53 | 202 | 463 | 610 | 1.79e-13 | 69.3 |
| Msa0331970 | MtrunA17_Chr2g0333611 | 23.944 | 213 | 129 | 5 | 27 | 221 | 3 | 200 | 3.21e-13 | 66.6 |
| Msa0331970 | MtrunA17_Chr5g0411341 | 30.719 | 153 | 98 | 4 | 53 | 202 | 494 | 641 | 3.92e-13 | 68.6 |
| Msa0331970 | MtrunA17_Chr8g0346161 | 50.820 | 61 | 23 | 1 | 53 | 113 | 292 | 345 | 2.95e-12 | 65.9 |
| Msa0331970 | MtrunA17_Chr8g0346151 | 60.000 | 45 | 18 | 0 | 53 | 97 | 280 | 324 | 4.23e-12 | 65.1 |
| Msa0331970 | MtrunA17_Chr5g0400661 | 26.257 | 179 | 109 | 6 | 53 | 219 | 150 | 317 | 4.86e-12 | 64.7 |
| Msa0331970 | MtrunA17_Chr2g0280161 | 28.221 | 163 | 103 | 2 | 53 | 214 | 178 | 327 | 5.15e-12 | 64.7 |
| Msa0331970 | MtrunA17_Chr3g0141091 | 51.282 | 78 | 34 | 2 | 48 | 122 | 169 | 245 | 7.77e-12 | 63.9 |
| Msa0331970 | MtrunA17_Chr1g0185621 | 50.909 | 55 | 27 | 0 | 43 | 97 | 466 | 520 | 1.04e-11 | 64.3 |
| Msa0331970 | MtrunA17_Chr5g0411541 | 35.032 | 157 | 80 | 4 | 48 | 204 | 152 | 286 | 1.53e-11 | 63.2 |
| Msa0331970 | MtrunA17_Chr4g0048851 | 28.743 | 167 | 99 | 3 | 50 | 215 | 45 | 192 | 2.83e-11 | 61.2 |
| Msa0331970 | MtrunA17_Chr2g0333641 | 25.758 | 198 | 117 | 6 | 53 | 242 | 138 | 313 | 4.00e-11 | 62.0 |
| Msa0331970 | MtrunA17_Chr4g0054571 | 45.000 | 60 | 33 | 0 | 53 | 112 | 151 | 210 | 5.56e-11 | 61.6 |
| Msa0331970 | MtrunA17_Chr8g0336681 | 26.012 | 173 | 114 | 4 | 46 | 214 | 150 | 312 | 6.97e-11 | 61.2 |
| Msa0331970 | MtrunA17_Chr5g0400621 | 37.838 | 74 | 43 | 1 | 37 | 107 | 139 | 212 | 7.21e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0331970 | AT5G57150.1 | 63.525 | 244 | 81 | 6 | 1 | 241 | 1 | 239 | 1.56e-96 | 283 |
| Msa0331970 | AT4G29930.1 | 55.200 | 250 | 98 | 3 | 1 | 238 | 1 | 248 | 4.84e-90 | 266 |
| Msa0331970 | AT4G29930.6 | 55.417 | 240 | 87 | 3 | 1 | 238 | 1 | 222 | 8.75e-88 | 259 |
| Msa0331970 | AT4G29930.2 | 55.000 | 240 | 85 | 3 | 1 | 238 | 1 | 219 | 7.94e-87 | 257 |
| Msa0331970 | AT5G57150.5 | 65.596 | 218 | 67 | 6 | 1 | 215 | 1 | 213 | 1.63e-86 | 256 |
| Msa0331970 | AT5G57150.2 | 63.801 | 221 | 71 | 6 | 1 | 217 | 1 | 216 | 1.47e-85 | 254 |
| Msa0331970 | AT5G57150.3 | 64.384 | 219 | 69 | 6 | 1 | 215 | 1 | 214 | 1.49e-85 | 254 |
| Msa0331970 | AT5G57150.4 | 64.384 | 219 | 69 | 6 | 1 | 215 | 1 | 214 | 6.71e-84 | 251 |
| Msa0331970 | AT4G29930.3 | 54.825 | 228 | 89 | 3 | 1 | 216 | 1 | 226 | 6.79e-80 | 241 |
| Msa0331970 | AT4G29930.7 | 54.825 | 228 | 89 | 3 | 1 | 216 | 1 | 226 | 6.79e-80 | 241 |
| Msa0331970 | AT4G29930.5 | 54.587 | 218 | 76 | 3 | 1 | 216 | 1 | 197 | 1.58e-76 | 231 |
| Msa0331970 | AT4G29930.4 | 54.857 | 175 | 65 | 3 | 1 | 163 | 1 | 173 | 8.28e-55 | 174 |
| Msa0331970 | AT1G12860.1 | 33.690 | 187 | 111 | 6 | 49 | 232 | 264 | 440 | 1.12e-18 | 84.7 |
| Msa0331970 | AT3G26744.1 | 32.447 | 188 | 116 | 5 | 49 | 232 | 304 | 484 | 2.24e-18 | 84.0 |
| Msa0331970 | AT3G26744.4 | 32.447 | 188 | 116 | 5 | 49 | 232 | 304 | 484 | 2.24e-18 | 84.0 |
| Msa0331970 | AT3G26744.2 | 32.447 | 188 | 116 | 5 | 49 | 232 | 304 | 484 | 2.24e-18 | 84.0 |
| Msa0331970 | AT2G28160.2 | 31.013 | 158 | 93 | 4 | 51 | 205 | 130 | 274 | 2.10e-17 | 80.1 |
| Msa0331970 | AT2G28160.1 | 31.013 | 158 | 93 | 4 | 51 | 205 | 130 | 274 | 2.25e-17 | 80.1 |
| Msa0331970 | AT2G16910.1 | 31.183 | 186 | 113 | 5 | 51 | 225 | 313 | 494 | 3.51e-17 | 80.9 |
| Msa0331970 | AT3G26744.6 | 34.568 | 162 | 95 | 5 | 49 | 206 | 304 | 458 | 1.81e-16 | 78.6 |
| Msa0331970 | AT1G01260.1 | 29.518 | 166 | 82 | 3 | 53 | 218 | 434 | 564 | 5.61e-16 | 77.4 |
| Msa0331970 | AT1G01260.2 | 29.518 | 166 | 82 | 3 | 53 | 218 | 434 | 564 | 5.61e-16 | 77.4 |
| Msa0331970 | AT1G01260.3 | 29.518 | 166 | 82 | 3 | 53 | 218 | 434 | 564 | 5.61e-16 | 77.4 |
| Msa0331970 | AT2G46510.1 | 61.818 | 55 | 21 | 0 | 53 | 107 | 396 | 450 | 2.87e-15 | 75.1 |
| Msa0331970 | AT1G12860.2 | 34.783 | 161 | 92 | 6 | 49 | 206 | 264 | 414 | 3.46e-15 | 74.7 |
| Msa0331970 | AT5G46760.1 | 29.032 | 186 | 115 | 7 | 53 | 233 | 416 | 589 | 3.56e-15 | 74.7 |
| Msa0331970 | AT4G17880.1 | 30.625 | 160 | 78 | 4 | 53 | 202 | 417 | 553 | 3.04e-14 | 72.0 |
| Msa0331970 | AT4G16430.1 | 46.053 | 76 | 40 | 1 | 53 | 127 | 321 | 396 | 3.77e-14 | 71.6 |
| Msa0331970 | AT1G32640.1 | 31.333 | 150 | 91 | 4 | 53 | 202 | 453 | 590 | 6.39e-14 | 71.2 |
| Msa0331970 | AT4G37850.2 | 29.444 | 180 | 107 | 6 | 53 | 228 | 153 | 316 | 1.45e-13 | 69.3 |
| Msa0331970 | AT4G37850.1 | 29.444 | 180 | 107 | 6 | 53 | 228 | 153 | 316 | 1.45e-13 | 69.3 |
| Msa0331970 | AT1G63650.3 | 29.213 | 178 | 116 | 4 | 41 | 212 | 397 | 570 | 5.18e-13 | 68.6 |
| Msa0331970 | AT1G63650.1 | 29.213 | 178 | 116 | 4 | 41 | 212 | 397 | 570 | 5.18e-13 | 68.6 |
| Msa0331970 | AT1G63650.2 | 29.213 | 178 | 116 | 4 | 41 | 212 | 397 | 570 | 5.18e-13 | 68.6 |
| Msa0331970 | AT5G46830.1 | 27.473 | 182 | 111 | 3 | 53 | 228 | 344 | 510 | 4.23e-12 | 65.9 |
| Msa0331970 | AT4G21330.1 | 30.357 | 168 | 107 | 4 | 51 | 218 | 31 | 188 | 5.26e-12 | 63.5 |
| Msa0331970 | AT1G10610.1 | 27.513 | 189 | 120 | 4 | 51 | 232 | 263 | 441 | 1.25e-11 | 64.3 |
| Msa0331970 | AT1G10610.2 | 27.513 | 189 | 120 | 4 | 51 | 232 | 233 | 411 | 1.62e-11 | 63.9 |
| Msa0331970 | AT1G10610.3 | 26.064 | 188 | 124 | 3 | 51 | 232 | 166 | 344 | 1.66e-11 | 63.5 |
| Msa0331970 | AT2G22770.1 | 23.834 | 193 | 117 | 3 | 33 | 209 | 113 | 291 | 5.29e-11 | 62.0 |
| Msa0331970 | AT4G00870.1 | 43.333 | 60 | 34 | 0 | 53 | 112 | 250 | 309 | 8.89e-11 | 61.6 |
Find 62 sgRNAs with CRISPR-Local
Find 444 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTAAGGTGGTTGGTTTATT+TGG | 0.165944 | 2_4:-48260729 | None:intergenic |
| TCTTGATCAAAATCATAATT+TGG | 0.197391 | 2_4:-48262066 | None:intergenic |
| CTGATCTGTTCTCTTCTTCT+TGG | 0.200519 | 2_4:-48262109 | None:intergenic |
| TGATGATTGAAAGAAGTTTA+AGG | 0.235606 | 2_4:-48260745 | None:intergenic |
| GGATAAAGCTTCAATTATTA+AGG | 0.255192 | 2_4:+48261948 | Msa0331970:CDS |
| TAATTTGGATTAATATTATT+AGG | 0.270353 | 2_4:-48262051 | None:intergenic |
| ACCTATCAAGCTCTTGGGTT+TGG | 0.289916 | 2_4:-48260871 | None:intergenic |
| GTGATGAGTACAAGCTTTAC+TGG | 0.315934 | 2_4:+48260831 | Msa0331970:CDS |
| CCTGATGATGCTGCACCATC+TGG | 0.327488 | 2_4:-48261046 | None:intergenic |
| GAGATAATGGAACTTGAATC+TGG | 0.329852 | 2_4:+48262024 | Msa0331970:CDS |
| TGTTTACCTTGCTAATGTTT+GGG | 0.357210 | 2_4:-48261150 | None:intergenic |
| GATTATTCAAGCTGAGATAA+TGG | 0.358095 | 2_4:+48262011 | Msa0331970:CDS |
| TCCCTTCATTAGATGCTCAT+AGG | 0.368457 | 2_4:-48269022 | None:intergenic |
| TTTACCTCAAGGACTTCAAT+TGG | 0.374167 | 2_4:-48262162 | None:intergenic |
| ATTGTTACCTATCAAGCTCT+TGG | 0.383647 | 2_4:-48260877 | None:intergenic |
| ATGTTTACCTTGCTAATGTT+TGG | 0.403010 | 2_4:-48261151 | None:intergenic |
| TAGATGCTCATAGGGCTTAG+AGG | 0.411365 | 2_4:-48269013 | None:intergenic |
| TTGTGGTTGCAGCTGGGGAT+TGG | 0.412240 | 2_4:+48260988 | Msa0331970:intron |
| ACATTGTCTCTGAGAGGAAT+AGG | 0.413409 | 2_4:+48261083 | Msa0331970:CDS |
| TTGTTACCTATCAAGCTCTT+GGG | 0.420680 | 2_4:-48260876 | None:intergenic |
| TTGCAGCTGGGGATTGGATG+AGG | 0.423798 | 2_4:+48260994 | Msa0331970:intron |
| TCCAAACCCAAGAGCTTGAT+AGG | 0.430262 | 2_4:+48260870 | Msa0331970:CDS |
| GTTGTTAAAGTTGAAATTGA+AGG | 0.431964 | 2_4:-48260794 | None:intergenic |
| CCCTTCATTAGATGCTCATA+GGG | 0.440042 | 2_4:-48269021 | None:intergenic |
| TGAAAGAAGTTTAAGGTGGT+TGG | 0.451251 | 2_4:-48260738 | None:intergenic |
| TATCAAGCTCTTGGGTTTGG+AGG | 0.453409 | 2_4:-48260868 | None:intergenic |
| GCCCTATGAGCATCTAATGA+AGG | 0.457378 | 2_4:+48269020 | Msa0331970:exon |
| CCAGATGGTGCAGCATCATC+AGG | 0.460325 | 2_4:+48261046 | Msa0331970:CDS |
| TGAGCTTGACATGTAACAAA+AGG | 0.468788 | 2_4:+48263507 | Msa0331970:CDS |
| CTGATGATGCTGCACCATCT+GGG | 0.496200 | 2_4:-48261045 | None:intergenic |
| AGCCACTAGTATATAAGTAT+AGG | 0.503320 | 2_4:+48269252 | Msa0331970:three_prime_UTR |
| GCAGCTTAGGGTTACATACA+TGG | 0.504078 | 2_4:+48263466 | Msa0331970:intron |
| AAGAGCTTCCTGTGTTGCTA+AGG | 0.527358 | 2_4:+48262085 | Msa0331970:CDS |
| TTGGGTTTGGAGGAACATGT+TGG | 0.533281 | 2_4:-48260858 | None:intergenic |
| CCCTATGAGCATCTAATGAA+GGG | 0.535852 | 2_4:+48269021 | Msa0331970:exon |
| AATTTCAACTTTAACAACCA+TGG | 0.540733 | 2_4:+48260799 | Msa0331970:exon |
| AGTATATAAGTATAGGATTG+AGG | 0.543177 | 2_4:+48269259 | Msa0331970:three_prime_UTR |
| GAGCTTGACATGTAACAAAA+GGG | 0.547151 | 2_4:+48263508 | Msa0331970:CDS |
| CTTTCCAATTGAAGTCCTTG+AGG | 0.548914 | 2_4:+48262158 | Msa0331970:CDS |
| TAATAATTTGAAAATTGAGT+AGG | 0.560330 | 2_4:-48269333 | None:intergenic |
| TGATGATGCTGCACCATCTG+GGG | 0.561453 | 2_4:-48261044 | None:intergenic |
| TTCTTGGACCTTAGCAACAC+AGG | 0.566724 | 2_4:-48262093 | None:intergenic |
| AGGGTCATTAAGAGCTGCAA+TGG | 0.567337 | 2_4:-48268993 | None:intergenic |
| CTCATCACCAATGTTCTCCA+TGG | 0.572679 | 2_4:-48260816 | None:intergenic |
| ATCCTATACTTATATACTAG+TGG | 0.576611 | 2_4:-48269254 | None:intergenic |
| AGATGCTCATAGGGCTTAGA+GGG | 0.580755 | 2_4:-48269012 | None:intergenic |
| TATATATAGTGATATAGTGA+TGG | 0.581295 | 2_4:-48260681 | None:intergenic |
| TGATGAGTACAAGCTTTACT+GGG | 0.584970 | 2_4:+48260832 | Msa0331970:CDS |
| TTTGAAGACAGTCTTCATTG+AGG | 0.586246 | 2_4:+48263619 | Msa0331970:CDS |
| TTAACAACCATGGAGAACAT+TGG | 0.592898 | 2_4:+48260809 | Msa0331970:exon |
| AGATAATGGAACTTGAATCT+GGG | 0.607917 | 2_4:+48262025 | Msa0331970:CDS |
| TAACAAAAGGGCAGACACAA+TGG | 0.621554 | 2_4:+48263520 | Msa0331970:CDS |
| ACTCTTTGCACTTAGAGCAG+TGG | 0.626022 | 2_4:+48261126 | Msa0331970:CDS |
| TATGATTCAAGCTCCCCAGA+TGG | 0.634637 | 2_4:+48261031 | Msa0331970:CDS |
| CAGCTTAGGGTTACATACAT+GGG | 0.636587 | 2_4:+48263467 | Msa0331970:intron |
| TTGTCTCTGAGAGGAATAGG+AGG | 0.637270 | 2_4:+48261086 | Msa0331970:CDS |
| CTAAGAACATTGTCTCTGAG+AGG | 0.651380 | 2_4:+48261077 | Msa0331970:CDS |
| CTATGAAAATACGAAAGCCA+CGG | 0.657789 | 2_4:-48269284 | None:intergenic |
| AGTGGTCCCAAACATTAGCA+AGG | 0.661525 | 2_4:+48261144 | Msa0331970:CDS |
| AGTATAGGATTGAGGAACCG+TGG | 0.680536 | 2_4:+48269267 | Msa0331970:three_prime_UTR |
| TGATTGAAAGAAGTTTAAGG+TGG | 0.686687 | 2_4:-48260742 | None:intergenic |
| ATACATGGGAGAGAATACAA+TGG | 0.777577 | 2_4:+48263481 | Msa0331970:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAAATAAAAAATAATATTT+TGG | + | chr2_4:48262501-48262520 | Msa0331970:intron | 0.0% |
| !!! | TTTTTTTTTTTTTTTTTTTT+GGG | - | chr2_4:48266968-48266987 | None:intergenic | 0.0% |
| !!! | TTATTTTAATTTTTAATATT+CGG | + | chr2_4:48267645-48267664 | Msa0331970:intron | 0.0% |
| !! | TACTAAATATATGTTATAAA+TGG | - | chr2_4:48261621-48261640 | None:intergenic | 10.0% |
| !! | TAATTTGGATTAATATTATT+AGG | - | chr2_4:48262054-48262073 | None:intergenic | 10.0% |
| !! | TGTATATAATATTAATTGAA+GGG | + | chr2_4:48262530-48262549 | Msa0331970:intron | 10.0% |
| !! | AATCAAATCAATATTTATAT+TGG | - | chr2_4:48262948-48262967 | None:intergenic | 10.0% |
| !!! | TTTTATTTTAATTTTTTGAC+AGG | - | chr2_4:48263022-48263041 | None:intergenic | 10.0% |
| !! | TATAATCTATATTTATTGTT+GGG | - | chr2_4:48263302-48263321 | None:intergenic | 10.0% |
| !!! | TTTTTGTTTTATATTATTTG+AGG | - | chr2_4:48263785-48263804 | None:intergenic | 10.0% |
| !! | TCAATGTAAATTATATTTAA+AGG | + | chr2_4:48263853-48263872 | Msa0331970:intron | 10.0% |
| !!! | ACAATTTTTTAAATATTGTT+TGG | - | chr2_4:48263948-48263967 | None:intergenic | 10.0% |
| !! | TATATATATTAAACATGAAT+AGG | - | chr2_4:48264518-48264537 | None:intergenic | 10.0% |
| !! | TTATTAAATTATTGTTTACT+TGG | - | chr2_4:48265361-48265380 | None:intergenic | 10.0% |
| !! | TTTCTTATATTAAGATTAAA+TGG | - | chr2_4:48266779-48266798 | None:intergenic | 10.0% |
| !! | AAAAGGAAAAAAATTATATA+TGG | - | chr2_4:48267371-48267390 | None:intergenic | 10.0% |
| !!! | TTTTATTTAACTAAAAAGTA+CGG | - | chr2_4:48268576-48268595 | None:intergenic | 10.0% |
| !!! | CATTTTTTTAATTCAAAATT+AGG | + | chr2_4:48268813-48268832 | Msa0331970:intron | 10.0% |
| !!! | AATTAATTTACTTTTGTACT+TGG | - | chr2_4:48261310-48261329 | None:intergenic | 15.0% |
| !! | AGTACAAAAGTAAATTAATT+TGG | + | chr2_4:48261310-48261329 | Msa0331970:intron | 15.0% |
| !! | AAACAATACATGTATATATA+CGG | - | chr2_4:48261348-48261367 | None:intergenic | 15.0% |
| !!! | TTTTTTAAACATTTTGTTAG+AGG | + | chr2_4:48261431-48261450 | Msa0331970:intron | 15.0% |
| !! | AATAGTTGATTAGAATAATT+CGG | - | chr2_4:48262468-48262487 | None:intergenic | 15.0% |
| !! | GTGTATATAATATTAATTGA+AGG | + | chr2_4:48262529-48262548 | Msa0331970:intron | 15.0% |
| !! | ATAATCTATATTTATTGTTG+GGG | - | chr2_4:48263301-48263320 | None:intergenic | 15.0% |
| !! | CTATAATCTATATTTATTGT+TGG | - | chr2_4:48263303-48263322 | None:intergenic | 15.0% |
| !! | AATAAAGAAAGTGAAATTAA+AGG | - | chr2_4:48263656-48263675 | None:intergenic | 15.0% |
| !! | TAACTAATTGAATTATGTTT+CGG | - | chr2_4:48263999-48264018 | None:intergenic | 15.0% |
| !!! | GATTTTTTTAAGTAATTTAG+TGG | - | chr2_4:48264158-48264177 | None:intergenic | 15.0% |
| !!! | TGAACACTTTTAAATAAAAA+AGG | + | chr2_4:48264388-48264407 | Msa0331970:intron | 15.0% |
| !! | AATTAAGTCAAGTAAAAAAT+AGG | + | chr2_4:48264589-48264608 | Msa0331970:intron | 15.0% |
| !! | ATTAAGTCAAGTAAAAAATA+GGG | + | chr2_4:48264590-48264609 | Msa0331970:intron | 15.0% |
| !! | TTAAATGAAAGAGTTAAAAA+AGG | + | chr2_4:48264635-48264654 | Msa0331970:intron | 15.0% |
| !! | TAAATGAAAGAGTTAAAAAA+GGG | + | chr2_4:48264636-48264655 | Msa0331970:intron | 15.0% |
| !! | AATATAAGAATAATTGACAA+AGG | + | chr2_4:48265188-48265207 | Msa0331970:intron | 15.0% |
| !! | ATATAAGAATAATTGACAAA+GGG | + | chr2_4:48265189-48265208 | Msa0331970:intron | 15.0% |
| !!! | GTTACCTTATTTATTTATTT+CGG | + | chr2_4:48265678-48265697 | Msa0331970:intron | 15.0% |
| !!! | ATATCTTTTTAATAGTTGAT+CGG | - | chr2_4:48266019-48266038 | None:intergenic | 15.0% |
| !! | ATCAACTATTAAAAAGATAT+GGG | + | chr2_4:48266019-48266038 | Msa0331970:intron | 15.0% |
| !!! | TAAAAAAAAGTTACTTGTTT+TGG | + | chr2_4:48266461-48266480 | Msa0331970:intron | 15.0% |
| !!! | AAGAAACAATTTTTTTTATG+TGG | + | chr2_4:48266793-48266812 | Msa0331970:intron | 15.0% |
| !!! | TTTTTTTTTTTTTTGGGATA+AGG | - | chr2_4:48266962-48266981 | None:intergenic | 15.0% |
| !! | ACTATAAAAATTTAACTCAT+GGG | - | chr2_4:48267225-48267244 | None:intergenic | 15.0% |
| !! | TACTATAAAAATTTAACTCA+TGG | - | chr2_4:48267226-48267245 | None:intergenic | 15.0% |
| !! | AAAAAAATTATATATGGACA+AGG | - | chr2_4:48267365-48267384 | None:intergenic | 15.0% |
| !!! | TTTTTTCCTTTTAACAAAAT+AGG | + | chr2_4:48267379-48267398 | Msa0331970:intron | 15.0% |
| !!! | TATTTTCCTATTTTGTTAAA+AGG | - | chr2_4:48267388-48267407 | None:intergenic | 15.0% |
| !!! | ATAAGTCTTTAATTTAATGT+TGG | - | chr2_4:48267427-48267446 | None:intergenic | 15.0% |
| !! | AAAATCTCTATTAATTGATT+TGG | - | chr2_4:48267455-48267474 | None:intergenic | 15.0% |
| !! | AATTCAATATAAAATCATGT+TGG | + | chr2_4:48267485-48267504 | Msa0331970:intron | 15.0% |
| !!! | AACTAATAAATACTTTTTCA+GGG | - | chr2_4:48267732-48267751 | None:intergenic | 15.0% |
| !! | AACATGCATTATTATATATA+GGG | + | chr2_4:48267987-48268006 | Msa0331970:intron | 15.0% |
| !! | CTCATTTAAATAGTAAAATA+TGG | - | chr2_4:48268099-48268118 | None:intergenic | 15.0% |
| !!! | TTATTTTTAAAATGTTGTGT+TGG | - | chr2_4:48268191-48268210 | None:intergenic | 15.0% |
| !! | ATAAGTATTATAACTTATCA+TGG | + | chr2_4:48268629-48268648 | Msa0331970:intron | 15.0% |
| !!! | TAATGAGGTATTATTTTTTA+GGG | - | chr2_4:48268698-48268717 | None:intergenic | 15.0% |
| !!! | ATAATGAGGTATTATTTTTT+AGG | - | chr2_4:48268699-48268718 | None:intergenic | 15.0% |
| !! | AGAAAATAAAATAAAATGAG+AGG | + | chr2_4:48268870-48268889 | Msa0331970:intron | 15.0% |
| !! | TAATAATTTGAAAATTGAGT+AGG | - | chr2_4:48269336-48269355 | None:intergenic | 15.0% |
| !!! | ACTCAATTTTCAAATTATTA+AGG | + | chr2_4:48269336-48269355 | Msa0331970:three_prime_UTR | 15.0% |
| !! | TATATATAGTGATATAGTGA+TGG | - | chr2_4:48260684-48260703 | None:intergenic | 20.0% |
| !!! | ATCTTGATAATTGAGATATA+TGG | + | chr2_4:48260965-48260984 | Msa0331970:intron | 20.0% |
| !!! | TTTGTTTTGTTTGAATTAAG+TGG | + | chr2_4:48261254-48261273 | Msa0331970:intron | 20.0% |
| !! | ATAATTACTATACCATATGA+TGG | - | chr2_4:48261860-48261879 | None:intergenic | 20.0% |
| !! | CATATGGTATAGTAATTATT+TGG | + | chr2_4:48261861-48261880 | Msa0331970:intron | 20.0% |
| !! | TCTTGATCAAAATCATAATT+TGG | - | chr2_4:48262069-48262088 | None:intergenic | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | + | chr2_4:48262564-48262583 | Msa0331970:intron | 20.0% |
| !!! | CACTTTTAAGTATAAGAATT+AGG | - | chr2_4:48262673-48262692 | None:intergenic | 20.0% |
| !! | ACAAAAATAAGACATTGTAT+AGG | + | chr2_4:48262903-48262922 | Msa0331970:intron | 20.0% |
| !! | CAAAAATAAGACATTGTATA+GGG | + | chr2_4:48262904-48262923 | Msa0331970:intron | 20.0% |
| !!! | TGTCTATTTTATTAGAGAAA+TGG | - | chr2_4:48263075-48263094 | None:intergenic | 20.0% |
| !! | TCAGATAAAAAAAATAGTAG+TGG | + | chr2_4:48263096-48263115 | Msa0331970:intron | 20.0% |
| !! | CAGATAAAAAAAATAGTAGT+GGG | + | chr2_4:48263097-48263116 | Msa0331970:intron | 20.0% |
| !!! | CTAATATATTTTCTCTACTA+GGG | - | chr2_4:48263197-48263216 | None:intergenic | 20.0% |
| !! | GAACATGAACATAAAAAATT+AGG | - | chr2_4:48263220-48263239 | None:intergenic | 20.0% |
| !! | TAATCTATATTTATTGTTGG+GGG | - | chr2_4:48263300-48263319 | None:intergenic | 20.0% |
| !! | TGATGCTAAAAAAATAAATG+TGG | + | chr2_4:48263359-48263378 | Msa0331970:intron | 20.0% |
| !! | GATGCTAAAAAAATAAATGT+GGG | + | chr2_4:48263360-48263379 | Msa0331970:intron | 20.0% |
| !! | ATGCTAAAAAAATAAATGTG+GGG | + | chr2_4:48263361-48263380 | Msa0331970:intron | 20.0% |
| !!! | TCCTATTTAATTTGCTTTAT+AGG | + | chr2_4:48263729-48263748 | Msa0331970:intron | 20.0% |
| !! | ACCTATAAAGCAAATTAAAT+AGG | - | chr2_4:48263733-48263752 | None:intergenic | 20.0% |
| !!! | ACATTTTAAGATGAATAAGT+GGG | - | chr2_4:48263901-48263920 | None:intergenic | 20.0% |
| !! | AACTAATTGAATTATGTTTC+GGG | - | chr2_4:48263998-48264017 | None:intergenic | 20.0% |
| !! | AAATATTGTTAGCTATTCAT+CGG | + | chr2_4:48264185-48264204 | Msa0331970:intron | 20.0% |
| !! | AAATAAAAAAGGCAATAATG+AGG | + | chr2_4:48264399-48264418 | Msa0331970:intron | 20.0% |
| !! | AATAAAAAAGGCAATAATGA+GGG | + | chr2_4:48264400-48264419 | Msa0331970:intron | 20.0% |
| !! | AGTAGTATAATACTCAAAAT+GGG | - | chr2_4:48264470-48264489 | None:intergenic | 20.0% |
| !! | AAGTAGTATAATACTCAAAA+TGG | - | chr2_4:48264471-48264490 | None:intergenic | 20.0% |
| !!! | TAGGAGTATAAAAAAAGAAT+AGG | - | chr2_4:48264499-48264518 | None:intergenic | 20.0% |
| !! | AAATGAAAGAGTTAAAAAAG+GGG | + | chr2_4:48264637-48264656 | Msa0331970:intron | 20.0% |
| !! | AAGCACAATATTTAGAAAAT+TGG | - | chr2_4:48264963-48264982 | None:intergenic | 20.0% |
| !!! | TATAGAATTTTAACTCTTCA+TGG | + | chr2_4:48265021-48265040 | Msa0331970:intron | 20.0% |
| !! | ACTAATTAGTGCTATATATT+TGG | - | chr2_4:48265158-48265177 | None:intergenic | 20.0% |
| !! | TATGCCGAAATAAATAAATA+AGG | - | chr2_4:48265685-48265704 | None:intergenic | 20.0% |
| !! | AAAAAAAAAATTAAACCACG+CGG | - | chr2_4:48265722-48265741 | None:intergenic | 20.0% |
| !! | GATCAACTATTAAAAAGATA+TGG | + | chr2_4:48266018-48266037 | Msa0331970:intron | 20.0% |
| !! | AGACTCATTTATAAATACTT+CGG | - | chr2_4:48266333-48266352 | None:intergenic | 20.0% |
| !! | TCAGTAACTCTATATATTTA+TGG | + | chr2_4:48266898-48266917 | Msa0331970:intron | 20.0% |
| !! | CAGTAACTCTATATATTTAT+GGG | + | chr2_4:48266899-48266918 | Msa0331970:intron | 20.0% |
| !!! | ATATTTTAAATTGTTCCTCA+TGG | - | chr2_4:48266932-48266951 | None:intergenic | 20.0% |
| !! | AAAATTTATTTCACACTCTT+AGG | - | chr2_4:48267034-48267053 | None:intergenic | 20.0% |
| !! | AGAAACAAAAAATATGAATG+TGG | - | chr2_4:48267577-48267596 | None:intergenic | 20.0% |
| !!! | CAACTAATAAATACTTTTTC+AGG | - | chr2_4:48267733-48267752 | None:intergenic | 20.0% |
| !!! | AAATTAACCTTATTTAGTGT+TGG | + | chr2_4:48267832-48267851 | Msa0331970:intron | 20.0% |
| !! | GAACATGCATTATTATATAT+AGG | + | chr2_4:48267986-48268005 | Msa0331970:intron | 20.0% |
| !! | CTCAATTGAAAAGAATAAAA+AGG | - | chr2_4:48268274-48268293 | None:intergenic | 20.0% |
| !!! | CTTTTTATTCTTTTCAATTG+AGG | + | chr2_4:48268272-48268291 | Msa0331970:intron | 20.0% |
| !!! | TATTTGATTCAAGAATTTTG+AGG | + | chr2_4:48268299-48268318 | Msa0331970:intron | 20.0% |
| !! | AGAAATTTACTTATTACTAG+TGG | + | chr2_4:48268364-48268383 | Msa0331970:intron | 20.0% |
| !! | ATTATAACTTATCATGGATA+TGG | + | chr2_4:48268635-48268654 | Msa0331970:intron | 20.0% |
| !!! | AATGAGGTATTATTTTTTAG+GGG | - | chr2_4:48268697-48268716 | None:intergenic | 20.0% |
| !! | TATTACAATGACAAATAATG+AGG | - | chr2_4:48268713-48268732 | None:intergenic | 20.0% |
| !!! | TTTTAATTCAAAATTAGGGA+AGG | + | chr2_4:48268818-48268837 | Msa0331970:intron | 20.0% |
| !! | TTTAATTCAAAATTAGGGAA+GGG | + | chr2_4:48268819-48268838 | Msa0331970:intron | 20.0% |
| !!! | GTTTTATCCTTTTTATTTTC+AGG | + | chr2_4:48268925-48268944 | Msa0331970:intron | 20.0% |
| ! | TGATGATTGAAAGAAGTTTA+AGG | - | chr2_4:48260748-48260767 | None:intergenic | 25.0% |
| ! | GTTGTTAAAGTTGAAATTGA+AGG | - | chr2_4:48260797-48260816 | None:intergenic | 25.0% |
| ! | AATTTCAACTTTAACAACCA+TGG | + | chr2_4:48260799-48260818 | Msa0331970:exon | 25.0% |
| ! | ATAATTGAGATATATGGTTG+TGG | + | chr2_4:48260971-48260990 | Msa0331970:intron | 25.0% |
| !! | GTAAACATCACTAATTTTAG+CGG | + | chr2_4:48261166-48261185 | Msa0331970:intron | 25.0% |
| ! | AATTAGTACTACTCAATTTC+TGG | + | chr2_4:48261209-48261228 | Msa0331970:intron | 25.0% |
| ! | ATTAGTACTACTCAATTTCT+GGG | + | chr2_4:48261210-48261229 | Msa0331970:intron | 25.0% |
| ! | TTTGTTTGAATTAAGTGGTT+TGG | + | chr2_4:48261259-48261278 | Msa0331970:intron | 25.0% |
| ! | TTGTTTGAATTAAGTGGTTT+GGG | + | chr2_4:48261260-48261279 | Msa0331970:intron | 25.0% |
| !!! | TGTATTTTAGGATTTAAGTC+GGG | - | chr2_4:48261472-48261491 | None:intergenic | 25.0% |
| !!! | CTGTATTTTAGGATTTAAGT+CGG | - | chr2_4:48261473-48261492 | None:intergenic | 25.0% |
| !! | CGATAGATTTTGTCTATTTT+GGG | - | chr2_4:48261544-48261563 | None:intergenic | 25.0% |
| !! | TCGATAGATTTTGTCTATTT+TGG | - | chr2_4:48261545-48261564 | None:intergenic | 25.0% |
| ! | CGATATAGGAAATTGTAAAA+TGG | - | chr2_4:48261680-48261699 | None:intergenic | 25.0% |
| ! | AATTTCTTTCTAATGATGAG+TGG | + | chr2_4:48261904-48261923 | Msa0331970:intron | 25.0% |
| ! | GGATAAAGCTTCAATTATTA+AGG | + | chr2_4:48261948-48261967 | Msa0331970:CDS | 25.0% |
| !!! | AAACAACGTTCATTTTGAAA+CGG | - | chr2_4:48262386-48262405 | None:intergenic | 25.0% |
| ! | TTCAAAATGAACGTTGTTTA+AGG | + | chr2_4:48262387-48262406 | Msa0331970:intron | 25.0% |
| ! | TTAAGGTGGTGATTTATAAT+TGG | - | chr2_4:48263144-48263163 | None:intergenic | 25.0% |
| ! | TATAAATCACCACCTTAATA+AGG | + | chr2_4:48263146-48263165 | Msa0331970:intron | 25.0% |
| ! | ATAAATCACCACCTTAATAA+GGG | + | chr2_4:48263147-48263166 | Msa0331970:intron | 25.0% |
| !! | GCTAATATATTTTCTCTACT+AGG | - | chr2_4:48263198-48263217 | None:intergenic | 25.0% |
| ! | GGTCATTAACAAAAAAATAG+TGG | - | chr2_4:48263275-48263294 | None:intergenic | 25.0% |
| ! | AGATTATAGAAGAGATTGTA+AGG | + | chr2_4:48263314-48263333 | Msa0331970:intron | 25.0% |
| ! | TGAGTGTGTAATTTGATATA+TGG | + | chr2_4:48263437-48263456 | Msa0331970:intron | 25.0% |
| ! | TGTTAACTTAGCTATGTTTA+CGG | - | chr2_4:48263830-48263849 | None:intergenic | 25.0% |
| !!! | CATTTTAAGATGAATAAGTG+GGG | - | chr2_4:48263900-48263919 | None:intergenic | 25.0% |
| !!! | CACATTTTAAGATGAATAAG+TGG | - | chr2_4:48263902-48263921 | None:intergenic | 25.0% |
| !!! | GTTAAAATTCACTTTTTTCG+AGG | - | chr2_4:48264136-48264155 | None:intergenic | 25.0% |
| ! | AAGATATTACAGCTAGAATA+AGG | + | chr2_4:48264285-48264304 | Msa0331970:intron | 25.0% |
| ! | AGATATTACAGCTAGAATAA+GGG | + | chr2_4:48264286-48264305 | Msa0331970:intron | 25.0% |
| ! | AAGTGTTCATTGTTCAATTA+TGG | - | chr2_4:48264377-48264396 | None:intergenic | 25.0% |
| ! | TTAAAAAAGGGGAGAAATAA+GGG | + | chr2_4:48264648-48264667 | Msa0331970:intron | 25.0% |
| ! | TAGTTGTTAACATTTGATGA+AGG | - | chr2_4:48264695-48264714 | None:intergenic | 25.0% |
| !!! | TTCTAAAACGACACTTAAAA+AGG | - | chr2_4:48264729-48264748 | None:intergenic | 25.0% |
| !! | GATTAAAATGAGGGTATAAT+AGG | - | chr2_4:48264795-48264814 | None:intergenic | 25.0% |
| ! | AAAAAATAGGAAATTATCCG+TGG | - | chr2_4:48264817-48264836 | None:intergenic | 25.0% |
| ! | TAAAGTGTGTGCAAAAAAAT+AGG | - | chr2_4:48264830-48264849 | None:intergenic | 25.0% |
| ! | ACAAAAAAATCCGAATTTGT+TGG | - | chr2_4:48264908-48264927 | None:intergenic | 25.0% |
| ! | TAAATATTGTGCTTATCTCT+TGG | + | chr2_4:48264969-48264988 | Msa0331970:intron | 25.0% |
| ! | TATTGTTTACTTGGTATTTC+AGG | - | chr2_4:48265352-48265371 | None:intergenic | 25.0% |
| !! | GAAACACGTTTTCAAATTAT+TGG | - | chr2_4:48265648-48265667 | None:intergenic | 25.0% |
| !! | TTTTCTTCTTCGTCTAATAA+TGG | + | chr2_4:48265757-48265776 | Msa0331970:intron | 25.0% |
| !! | CATGCTATAATTTGCAAAAT+GGG | + | chr2_4:48265808-48265827 | Msa0331970:intron | 25.0% |
| !!! | AGTTTAAGTTAGTAGTGTTT+TGG | + | chr2_4:48265929-48265948 | Msa0331970:intron | 25.0% |
| !!! | GTTTAAGTTAGTAGTGTTTT+GGG | + | chr2_4:48265930-48265949 | Msa0331970:intron | 25.0% |
| !!! | TTTAAGTTAGTAGTGTTTTG+GGG | + | chr2_4:48265931-48265950 | Msa0331970:intron | 25.0% |
| !! | TGTCAAGATGAATATCTTTT+GGG | - | chr2_4:48266223-48266242 | None:intergenic | 25.0% |
| ! | CATTTGATAAAAAAAGCTGA+AGG | - | chr2_4:48266571-48266590 | None:intergenic | 25.0% |
| ! | AGAATAATCAATTTCAATGG+TGG | - | chr2_4:48266707-48266726 | None:intergenic | 25.0% |
| ! | ACCATTGAAATTGATTATTC+TGG | + | chr2_4:48266706-48266725 | Msa0331970:intron | 25.0% |
| ! | ACCAGAATAATCAATTTCAA+TGG | - | chr2_4:48266710-48266729 | None:intergenic | 25.0% |
| !! | TCTTTAATTTAATGTTGGTG+TGG | - | chr2_4:48267422-48267441 | None:intergenic | 25.0% |
| !! | TGTCCAATTTTATATTTCTC+AGG | + | chr2_4:48267599-48267618 | Msa0331970:intron | 25.0% |
| ! | TGCATTATTATATATAGGGT+TGG | + | chr2_4:48267991-48268010 | Msa0331970:intron | 25.0% |
| ! | GCATTATTATATATAGGGTT+GGG | + | chr2_4:48267992-48268011 | Msa0331970:intron | 25.0% |
| ! | CATTATTATATATAGGGTTG+GGG | + | chr2_4:48267993-48268012 | Msa0331970:intron | 25.0% |
| !!! | TTTTTCAAGGTGAATAACTA+GGG | - | chr2_4:48268034-48268053 | None:intergenic | 25.0% |
| !!! | TTTTTTTGTCAAGTAGTCTA+GGG | - | chr2_4:48268070-48268089 | None:intergenic | 25.0% |
| !!! | TTTTTTTTGTCAAGTAGTCT+AGG | - | chr2_4:48268071-48268090 | None:intergenic | 25.0% |
| !! | TTTACTAAACCTTCTCTTTT+GGG | - | chr2_4:48268229-48268248 | None:intergenic | 25.0% |
| !! | TTTTACTAAACCTTCTCTTT+TGG | - | chr2_4:48268230-48268249 | None:intergenic | 25.0% |
| ! | TTATGACAAATCATTACTGA+AGG | + | chr2_4:48268518-48268537 | Msa0331970:intron | 25.0% |
| ! | TTAATTCAAAATTAGGGAAG+GGG | + | chr2_4:48268820-48268839 | Msa0331970:intron | 25.0% |
| ! | TCATTTGCCTGAAAATAAAA+AGG | - | chr2_4:48268935-48268954 | None:intergenic | 25.0% |
| !!! | TTTTTATTTTCAGGCAAATG+AGG | + | chr2_4:48268934-48268953 | Msa0331970:intron | 25.0% |
| !! | ACGGAATGAACAATTTTAAA+AGG | - | chr2_4:48269062-48269081 | None:intergenic | 25.0% |
| ! | CTATAAATAAGCACTTCATT+AGG | - | chr2_4:48269220-48269239 | None:intergenic | 25.0% |
| ! | ATCCTATACTTATATACTAG+TGG | - | chr2_4:48269257-48269276 | None:intergenic | 25.0% |
| ! | AGTATATAAGTATAGGATTG+AGG | + | chr2_4:48269259-48269278 | Msa0331970:three_prime_UTR | 25.0% |
| !! | TTTAAGGTGGTTGGTTTATT+TGG | - | chr2_4:48260732-48260751 | None:intergenic | 30.0% |
| TGATTGAAAGAAGTTTAAGG+TGG | - | chr2_4:48260745-48260764 | None:intergenic | 30.0% | |
| TCACTTTGATTCAAGTATGA+AGG | + | chr2_4:48260910-48260929 | Msa0331970:intron | 30.0% | |
| TGTTTACCTTGCTAATGTTT+GGG | - | chr2_4:48261153-48261172 | None:intergenic | 30.0% | |
| ATGTTTACCTTGCTAATGTT+TGG | - | chr2_4:48261154-48261173 | None:intergenic | 30.0% | |
| CGACTTAAATCCTAAAATAC+AGG | + | chr2_4:48261471-48261490 | Msa0331970:intron | 30.0% | |
| AAAATGGCAATCAAAATCGA+TGG | - | chr2_4:48261664-48261683 | None:intergenic | 30.0% | |
| ! | GACTTTTGTAGAATCGATAT+AGG | - | chr2_4:48261694-48261713 | None:intergenic | 30.0% |
| ! | AAATCGAAGGATTTTACTCA+AGG | - | chr2_4:48261716-48261735 | None:intergenic | 30.0% |
| AAAATCGCAATCAAAATCGA+AGG | - | chr2_4:48261561-48261580 | None:intergenic | 30.0% | |
| TTGATGTCTTTGACATCTAA+TGG | + | chr2_4:48261824-48261843 | Msa0331970:intron | 30.0% | |
| GGAAAATATCAACCATCATA+TGG | + | chr2_4:48261845-48261864 | Msa0331970:intron | 30.0% | |
| !!! | TAGTGACTTTTTTTTCCAGA+TGG | + | chr2_4:48261927-48261946 | Msa0331970:intron | 30.0% |
| ! | TAATTGAAGCTTTATCCATC+TGG | - | chr2_4:48261945-48261964 | None:intergenic | 30.0% |
| GATTATTCAAGCTGAGATAA+TGG | + | chr2_4:48262011-48262030 | Msa0331970:CDS | 30.0% | |
| !! | AGATAATGGAACTTGAATCT+GGG | + | chr2_4:48262025-48262044 | Msa0331970:CDS | 30.0% |
| !!! | GACACTCATTTTAAAACAGA+GGG | + | chr2_4:48262634-48262653 | Msa0331970:intron | 30.0% |
| AACAATGAAGTGTGAATCTA+AGG | - | chr2_4:48262710-48262729 | None:intergenic | 30.0% | |
| !! | TTCTGAAGTTTGATGATAAG+AGG | - | chr2_4:48262842-48262861 | None:intergenic | 30.0% |
| ! | TTTATAATTGGTTCTCAGCA+TGG | - | chr2_4:48263132-48263151 | None:intergenic | 30.0% |
| !! | AGTCTGATTTGGTATTTGAT+AGG | - | chr2_4:48263249-48263268 | None:intergenic | 30.0% |
| !! | AATAGTGGATAAGTCTGATT+TGG | - | chr2_4:48263260-48263279 | None:intergenic | 30.0% |
| GGAAGAAGAAAATGAATGTT+TGG | - | chr2_4:48263764-48263783 | None:intergenic | 30.0% | |
| GTTAACTTAGCTATGTTTAC+GGG | - | chr2_4:48263829-48263848 | None:intergenic | 30.0% | |
| ACATGCATTGTTATATGTAG+AGG | + | chr2_4:48264076-48264095 | Msa0331970:intron | 30.0% | |
| GTAAATAAGTAGAGTGTATG+AGG | - | chr2_4:48264114-48264133 | None:intergenic | 30.0% | |
| GATATTACAGCTAGAATAAG+GGG | + | chr2_4:48264287-48264306 | Msa0331970:intron | 30.0% | |
| ATATTACAGCTAGAATAAGG+GGG | + | chr2_4:48264288-48264307 | Msa0331970:intron | 30.0% | |
| !! | CTTTTCCACTTTTGTAAAAG+TGG | - | chr2_4:48264346-48264365 | None:intergenic | 30.0% |
| ! | CTTTTACAAAAGTGGAAAAG+TGG | + | chr2_4:48264346-48264365 | Msa0331970:intron | 30.0% |
| AAGTCAAGTAAAAAATAGGG+AGG | + | chr2_4:48264593-48264612 | Msa0331970:intron | 30.0% | |
| AAAATAGGGAGGAATAAGAT+TGG | + | chr2_4:48264604-48264623 | Msa0331970:intron | 30.0% | |
| GTTAAAAAAGGGGAGAAATA+AGG | + | chr2_4:48264647-48264666 | Msa0331970:intron | 30.0% | |
| AAACGACACTTAAAAAGGAA+CGG | - | chr2_4:48265280-48265299 | None:intergenic | 30.0% | |
| !! | TATACCCTCATTTTAATCCA+CGG | + | chr2_4:48264797-48264816 | Msa0331970:intron | 30.0% |
| ! | TTATCCGTGGATTAAAATGA+GGG | - | chr2_4:48264804-48264823 | None:intergenic | 30.0% |
| ! | ATTATCCGTGGATTAAAATG+AGG | - | chr2_4:48264805-48264824 | None:intergenic | 30.0% |
| CTTCATGGAACTATTATCAT+AGG | + | chr2_4:48265036-48265055 | Msa0331970:intron | 30.0% | |
| !!! | GTGTCGTTTTGGTATTTTAA+GGG | - | chr2_4:48265233-48265252 | None:intergenic | 30.0% |
| !!! | AGTGTCGTTTTGGTATTTTA+AGG | - | chr2_4:48265234-48265253 | None:intergenic | 30.0% |
| !!! | CCTTTTTAAGTGTCGTTTTA+GGG | - | chr2_4:48264726-48264745 | None:intergenic | 30.0% |
| !!! | TCCTTTTTAAGTGTCGTTTT+AGG | - | chr2_4:48264725-48264744 | None:intergenic | 30.0% |
| AAACGACACTTAAAAAGGAA+CGG | + | chr2_4:48265280-48265299 | Msa0331970:intron | 30.0% | |
| CTTCAAAATAGAACTCCATT+AGG | + | chr2_4:48265422-48265441 | Msa0331970:intron | 30.0% | |
| GCAAAGTTTACAAAACCTAA+TGG | - | chr2_4:48265440-48265459 | None:intergenic | 30.0% | |
| TGAATCAAAGTAGAAAAGAG+TGG | + | chr2_4:48265544-48265563 | Msa0331970:intron | 30.0% | |
| CACTAGTGATACATGAATTA+GGG | + | chr2_4:48265590-48265609 | Msa0331970:intron | 30.0% | |
| TCTAATAATGGCAAAATGTC+AGG | + | chr2_4:48265769-48265788 | Msa0331970:intron | 30.0% | |
| ! | GCATGCTATAATTTGCAAAA+TGG | + | chr2_4:48265807-48265826 | Msa0331970:intron | 30.0% |
| ! | CTGTCAAGATGAATATCTTT+TGG | - | chr2_4:48266224-48266243 | None:intergenic | 30.0% |
| CTTGTTAATAAGTGTTCTCT+AGG | + | chr2_4:48266351-48266370 | Msa0331970:intron | 30.0% | |
| ! | TGTTCTCTAGGAAATTGTTA+AGG | + | chr2_4:48266363-48266382 | Msa0331970:intron | 30.0% |
| CAACATGTGTTAATGAATGT+TGG | - | chr2_4:48266600-48266619 | None:intergenic | 30.0% | |
| !! | TTGATTTGCTACTGTATCTA+AGG | - | chr2_4:48267072-48267091 | None:intergenic | 30.0% |
| GCACCTGAGAAATATAAAAT+TGG | - | chr2_4:48267605-48267624 | None:intergenic | 30.0% | |
| GAATACACCAACACTAAATA+AGG | - | chr2_4:48267842-48267861 | None:intergenic | 30.0% | |
| CAAAATATGAAGTTCTATCG+TGG | - | chr2_4:48267939-48267958 | None:intergenic | 30.0% | |
| !!! | CTTTTTCAAGGTGAATAACT+AGG | - | chr2_4:48268035-48268054 | None:intergenic | 30.0% |
| CTAGTTATTCACCTTGAAAA+AGG | + | chr2_4:48268033-48268052 | Msa0331970:intron | 30.0% | |
| !! | GTTAGAATTCACCTTTTTCA+AGG | - | chr2_4:48268047-48268066 | None:intergenic | 30.0% |
| !!! | TTTTTTGTCAAGTAGTCTAG+GGG | - | chr2_4:48268069-48268088 | None:intergenic | 30.0% |
| TAAATTAGTCCCAAAAGAGA+AGG | + | chr2_4:48268217-48268236 | Msa0331970:intron | 30.0% | |
| !! | TCAGTAATGGATATTACTGA+GGG | + | chr2_4:48268423-48268442 | Msa0331970:intron | 30.0% |
| ATTATTCCCTCAGTAATTAC+TGG | + | chr2_4:48268541-48268560 | Msa0331970:intron | 30.0% | |
| TTATTCCCTCAGTAATTACT+GGG | + | chr2_4:48268542-48268561 | Msa0331970:intron | 30.0% | |
| ! | AAAATATATCTAGCTTGACG+TGG | + | chr2_4:48268776-48268795 | Msa0331970:intron | 30.0% |
| TAATTCAAAATTAGGGAAGG+GGG | + | chr2_4:48268821-48268840 | Msa0331970:intron | 30.0% | |
| AGCCACTAGTATATAAGTAT+AGG | + | chr2_4:48269252-48269271 | Msa0331970:three_prime_UTR | 30.0% | |
| ! | TGAAAGAAGTTTAAGGTGGT+TGG | - | chr2_4:48260741-48260760 | None:intergenic | 35.0% |
| TTAACAACCATGGAGAACAT+TGG | + | chr2_4:48260809-48260828 | Msa0331970:exon | 35.0% | |
| TGATGAGTACAAGCTTTACT+GGG | + | chr2_4:48260832-48260851 | Msa0331970:CDS | 35.0% | |
| TTGTTACCTATCAAGCTCTT+GGG | - | chr2_4:48260879-48260898 | None:intergenic | 35.0% | |
| ATTGTTACCTATCAAGCTCT+TGG | - | chr2_4:48260880-48260899 | None:intergenic | 35.0% | |
| ! | GTCGCAAAATCCTGTATTTT+AGG | - | chr2_4:48261484-48261503 | None:intergenic | 35.0% |
| TCGAAAGGGAATAGCAAAAT+CGG | - | chr2_4:48261759-48261778 | None:intergenic | 35.0% | |
| TAACCTAGGTTGTCAAAATC+GGG | - | chr2_4:48261795-48261814 | None:intergenic | 35.0% | |
| CTAACCTAGGTTGTCAAAAT+CGG | - | chr2_4:48261796-48261815 | None:intergenic | 35.0% | |
| !! | GAGATAATGGAACTTGAATC+TGG | + | chr2_4:48262024-48262043 | Msa0331970:CDS | 35.0% |
| TTTACCTCAAGGACTTCAAT+TGG | - | chr2_4:48262165-48262184 | None:intergenic | 35.0% | |
| TTGAAGTCCTTGAGGTAAAT+TGG | + | chr2_4:48262166-48262185 | Msa0331970:intron | 35.0% | |
| !!! | AACGTTCATTTTGAAACGGA+GGG | - | chr2_4:48262382-48262401 | None:intergenic | 35.0% |
| !!! | CGACACTCATTTTAAAACAG+AGG | + | chr2_4:48262633-48262652 | Msa0331970:intron | 35.0% |
| CTATATTTATTGTTGGGGGT+TGG | - | chr2_4:48263296-48263315 | None:intergenic | 35.0% | |
| GCATCAATAATACAAGAGAG+AGG | - | chr2_4:48263345-48263364 | None:intergenic | 35.0% | |
| ATACATGGGAGAGAATACAA+TGG | + | chr2_4:48263481-48263500 | Msa0331970:CDS | 35.0% | |
| TGAGCTTGACATGTAACAAA+AGG | + | chr2_4:48263507-48263526 | Msa0331970:CDS | 35.0% | |
| GAGCTTGACATGTAACAAAA+GGG | + | chr2_4:48263508-48263527 | Msa0331970:CDS | 35.0% | |
| TTTGAAGACAGTCTTCATTG+AGG | + | chr2_4:48263619-48263638 | Msa0331970:CDS | 35.0% | |
| GCATTGTTATATGTAGAGGT+CGG | + | chr2_4:48264080-48264099 | Msa0331970:intron | 35.0% | |
| CATTGTTATATGTAGAGGTC+GGG | + | chr2_4:48264081-48264100 | Msa0331970:intron | 35.0% | |
| ATTGTTATATGTAGAGGTCG+GGG | + | chr2_4:48264082-48264101 | Msa0331970:intron | 35.0% | |
| !!! | CTATTGATTTTGAAGCATGG+AGG | - | chr2_4:48264314-48264333 | None:intergenic | 35.0% |
| !!! | GGTCTATTGATTTTGAAGCA+TGG | - | chr2_4:48264317-48264336 | None:intergenic | 35.0% |
| ! | ACTTTTGTAAAAGTGGTGAG+CGG | - | chr2_4:48264339-48264358 | None:intergenic | 35.0% |
| CTCTCTTTCTCCAACAAATT+CGG | + | chr2_4:48264895-48264914 | Msa0331970:intron | 35.0% | |
| TACCAAAACGACACTTGAAT+AGG | + | chr2_4:48265239-48265258 | Msa0331970:intron | 35.0% | |
| !!! | TTCCTATTCAAGTGTCGTTT+TGG | - | chr2_4:48265244-48265263 | None:intergenic | 35.0% |
| CCCTAAAACGACACTTAAAA+AGG | + | chr2_4:48265275-48265294 | Msa0331970:intron | 35.0% | |
| !! | TTAGGGAGAGTGTATTCTTT+TGG | + | chr2_4:48265384-48265403 | Msa0331970:intron | 35.0% |
| TCTCTATTCTATGCTTGAGA+GGG | - | chr2_4:48265473-48265492 | None:intergenic | 35.0% | |
| ATCTCTATTCTATGCTTGAG+AGG | - | chr2_4:48265474-48265493 | None:intergenic | 35.0% | |
| ATCAAAGTAGAAAAGAGTGG+AGG | + | chr2_4:48265547-48265566 | Msa0331970:intron | 35.0% | |
| TCAAAGTAGAAAAGAGTGGA+GGG | + | chr2_4:48265548-48265567 | Msa0331970:intron | 35.0% | |
| CCTAATTCATGTATCACTAG+TGG | - | chr2_4:48265592-48265611 | None:intergenic | 35.0% | |
| CCACTAGTGATACATGAATT+AGG | + | chr2_4:48265589-48265608 | Msa0331970:intron | 35.0% | |
| !! | GGTTAACTTGTATCATGAGA+CGG | + | chr2_4:48265611-48265630 | Msa0331970:intron | 35.0% |
| !! | GTTAACTTGTATCATGAGAC+GGG | + | chr2_4:48265612-48265631 | Msa0331970:intron | 35.0% |
| AAAAATTAAACCACGCGGTA+AGG | - | chr2_4:48265717-48265736 | None:intergenic | 35.0% | |
| !! | TGACAAGGATTTTGCCATTT+TGG | - | chr2_4:48265874-48265893 | None:intergenic | 35.0% |
| ATATACACGCAGATATGACA+AGG | - | chr2_4:48265889-48265908 | None:intergenic | 35.0% | |
| !! | AAATGTTAACTTGTGCCCTT+GGG | - | chr2_4:48266200-48266219 | None:intergenic | 35.0% |
| TTCAAAGCTCATCAGAGTTA+GGG | + | chr2_4:48266280-48266299 | Msa0331970:intron | 35.0% | |
| ! | GGTGAAGAATCTTTTCTTTG+TGG | - | chr2_4:48266538-48266557 | None:intergenic | 35.0% |
| ATAAGTGTTCCACTCATTGT+GGG | - | chr2_4:48267762-48267781 | None:intergenic | 35.0% | |
| AATAAGTGTTCCACTCATTG+TGG | - | chr2_4:48267763-48267782 | None:intergenic | 35.0% | |
| GTGTTGGAGAGATAGATTTA+CGG | - | chr2_4:48268175-48268194 | None:intergenic | 35.0% | |
| TGCACAAAATCTGTCAGTAA+TGG | + | chr2_4:48268410-48268429 | Msa0331970:intron | 35.0% | |
| !! | GTCAGTAATGGATATTACTG+AGG | + | chr2_4:48268422-48268441 | Msa0331970:intron | 35.0% |
| AATGGATATTACTGAGGGAT+TGG | + | chr2_4:48268428-48268447 | Msa0331970:intron | 35.0% | |
| ACTGATGTCAGTATTACTGA+GGG | - | chr2_4:48268457-48268476 | None:intergenic | 35.0% | |
| TACTGATGTCAGTATTACTG+AGG | - | chr2_4:48268458-48268477 | None:intergenic | 35.0% | |
| ACTGACATCAGTATTGTTAC+TGG | + | chr2_4:48268465-48268484 | Msa0331970:intron | 35.0% | |
| TATTCCCTCAGTAATTACTG+GGG | + | chr2_4:48268543-48268562 | Msa0331970:intron | 35.0% | |
| CTCACGTTGGACATAATTAA+CGG | - | chr2_4:48269081-48269100 | None:intergenic | 35.0% | |
| CACGTGAATGAGCAATAAAA+GGG | + | chr2_4:48269180-48269199 | Msa0331970:intron | 35.0% | |
| CTATGAAAATACGAAAGCCA+CGG | - | chr2_4:48269287-48269306 | None:intergenic | 35.0% | |
| GTGATGAGTACAAGCTTTAC+TGG | + | chr2_4:48260831-48260850 | Msa0331970:CDS | 40.0% | |
| !!! | GATTGGATGAGGCTTTTTCA+GGG | + | chr2_4:48261005-48261024 | Msa0331970:CDS | 40.0% |
| CTAAGAACATTGTCTCTGAG+AGG | + | chr2_4:48261077-48261096 | Msa0331970:CDS | 40.0% | |
| ! | ACATTGTCTCTGAGAGGAAT+AGG | + | chr2_4:48261083-48261102 | Msa0331970:CDS | 40.0% |
| CGAAAGGGAATAGCAAAATC+GGG | - | chr2_4:48261758-48261777 | None:intergenic | 40.0% | |
| GACTTTACTTCAGGTCGAAA+GGG | - | chr2_4:48261773-48261792 | None:intergenic | 40.0% | |
| CAAAATCGGGACTTTACTTC+AGG | - | chr2_4:48261782-48261801 | None:intergenic | 40.0% | |
| ATCAATCGAACGTCTAACCT+AGG | - | chr2_4:48261809-48261828 | None:intergenic | 40.0% | |
| CTGATCTGTTCTCTTCTTCT+TGG | - | chr2_4:48262112-48262131 | None:intergenic | 40.0% | |
| CTTTCCAATTGAAGTCCTTG+AGG | + | chr2_4:48262158-48262177 | Msa0331970:CDS | 40.0% | |
| GAGATGATGATAGAGACAGT+GGG | - | chr2_4:48262192-48262211 | None:intergenic | 40.0% | |
| AGAGATGATGATAGAGACAG+TGG | - | chr2_4:48262193-48262212 | None:intergenic | 40.0% | |
| ATCACTGAGCTCACAACTTA+TGG | + | chr2_4:48262258-48262277 | Msa0331970:intron | 40.0% | |
| CCAAGTTATGTGTGAGTCAA+TGG | - | chr2_4:48262285-48262304 | None:intergenic | 40.0% | |
| !! | CCATTGACTCACACATAACT+TGG | + | chr2_4:48262282-48262301 | Msa0331970:intron | 40.0% |
| !!! | TTCATTTTGAAACGGAGGGA+TGG | - | chr2_4:48262378-48262397 | None:intergenic | 40.0% |
| !!! | CAACGTTCATTTTGAAACGG+AGG | - | chr2_4:48262383-48262402 | None:intergenic | 40.0% |
| AATGGTAGCCCTTATTAAGG+TGG | - | chr2_4:48263158-48263177 | None:intergenic | 40.0% | |
| TATATGGTTGAGTGCAGCTT+AGG | + | chr2_4:48263453-48263472 | Msa0331970:intron | 40.0% | |
| ATATGGTTGAGTGCAGCTTA+GGG | + | chr2_4:48263454-48263473 | Msa0331970:intron | 40.0% | |
| CAGCTTAGGGTTACATACAT+GGG | + | chr2_4:48263467-48263486 | Msa0331970:intron | 40.0% | |
| TAACAAAAGGGCAGACACAA+TGG | + | chr2_4:48263520-48263539 | Msa0331970:CDS | 40.0% | |
| ! | CTTTTGTAAAAGTGGTGAGC+GGG | - | chr2_4:48264338-48264357 | None:intergenic | 40.0% |
| !! | GCTCACCACTTTTACAAAAG+TGG | + | chr2_4:48264338-48264357 | Msa0331970:intron | 40.0% |
| GGTACTTAACTCGAATGTTC+TGG | - | chr2_4:48264432-48264451 | None:intergenic | 40.0% | |
| AATGGGAGAAATTACACACG+TGG | - | chr2_4:48264453-48264472 | None:intergenic | 40.0% | |
| AGGGAGGAATAAGATTGGTA+TGG | + | chr2_4:48264609-48264628 | Msa0331970:intron | 40.0% | |
| GACACTTAAAAAGGAACGGA+TGG | + | chr2_4:48265284-48265303 | Msa0331970:intron | 40.0% | |
| !!! | GGATTTTGCCATTTTGGTGT+GGG | - | chr2_4:48265868-48265887 | None:intergenic | 40.0% |
| !!! | AGGATTTTGCCATTTTGGTG+TGG | - | chr2_4:48265869-48265888 | None:intergenic | 40.0% |
| !! | TCATGTTAACTTGTGCCCTT+AGG | + | chr2_4:48266042-48266061 | Msa0331970:intron | 40.0% |
| !! | CATGTTAACTTGTGCCCTTA+GGG | + | chr2_4:48266043-48266062 | Msa0331970:intron | 40.0% |
| !! | TTCCTTAACTTGTGCCCTAA+GGG | - | chr2_4:48266060-48266079 | None:intergenic | 40.0% |
| TTCCTTAACTTATGCCCCAA+GGG | + | chr2_4:48266182-48266201 | Msa0331970:intron | 40.0% | |
| !! | AATGTTAACTTGTGCCCTTG+GGG | - | chr2_4:48266199-48266218 | None:intergenic | 40.0% |
| !! | GAAATGTTAACTTGTGCCCT+TGG | - | chr2_4:48266201-48266220 | None:intergenic | 40.0% |
| CTTCAAAGCTCATCAGAGTT+AGG | + | chr2_4:48266279-48266298 | Msa0331970:intron | 40.0% | |
| ! | CAGAGTTAGGGTTGATTTCA+AGG | + | chr2_4:48266292-48266311 | Msa0331970:intron | 40.0% |
| AAAGCTGAAGGTCGTTATCA+AGG | - | chr2_4:48266559-48266578 | None:intergenic | 40.0% | |
| TTTATGGGCAAGTTTCCATG+AGG | + | chr2_4:48266914-48266933 | Msa0331970:intron | 40.0% | |
| TTGATATGTCCCACAATGAG+TGG | + | chr2_4:48267750-48267769 | Msa0331970:intron | 40.0% | |
| TCAAGTAACCCTATTGTGGA+TGG | + | chr2_4:48268322-48268341 | Msa0331970:intron | 40.0% | |
| TGCTAAGACCATCCACAATA+GGG | - | chr2_4:48268333-48268352 | None:intergenic | 40.0% | |
| ATGCTAAGACCATCCACAAT+AGG | - | chr2_4:48268334-48268353 | None:intergenic | 40.0% | |
| TTGTGCATTACTGAGTCTCA+AGG | - | chr2_4:48268397-48268416 | None:intergenic | 40.0% | |
| GACATCAGTATTGTTACTGG+CGG | + | chr2_4:48268468-48268487 | Msa0331970:intron | 40.0% | |
| ! | GCGGAATTTTCCCTCAATAA+CGG | + | chr2_4:48268487-48268506 | Msa0331970:intron | 40.0% |
| !! | ATTTTCCCTCAATAACGGAG+AGG | + | chr2_4:48268492-48268511 | Msa0331970:intron | 40.0% |
| AACTACCTCTCCGTTATTGA+GGG | - | chr2_4:48268500-48268519 | None:intergenic | 40.0% | |
| TAACTACCTCTCCGTTATTG+AGG | - | chr2_4:48268501-48268520 | None:intergenic | 40.0% | |
| ATTCCCTCAGTAATTACTGG+GGG | + | chr2_4:48268544-48268563 | Msa0331970:intron | 40.0% | |
| CCCTTCATTAGATGCTCATA+GGG | - | chr2_4:48269024-48269043 | None:intergenic | 40.0% | |
| CCCTATGAGCATCTAATGAA+GGG | + | chr2_4:48269021-48269040 | Msa0331970:exon | 40.0% | |
| TCCCTTCATTAGATGCTCAT+AGG | - | chr2_4:48269025-48269044 | None:intergenic | 40.0% | |
| GAACATGAGTTAACTCACGT+TGG | - | chr2_4:48269094-48269113 | None:intergenic | 40.0% | |
| GCACGTGAATGAGCAATAAA+AGG | + | chr2_4:48269179-48269198 | Msa0331970:intron | 40.0% | |
| CTCATCACCAATGTTCTCCA+TGG | - | chr2_4:48260819-48260838 | None:intergenic | 45.0% | |
| TTGGGTTTGGAGGAACATGT+TGG | - | chr2_4:48260861-48260880 | None:intergenic | 45.0% | |
| TATCAAGCTCTTGGGTTTGG+AGG | - | chr2_4:48260871-48260890 | None:intergenic | 45.0% | |
| TCCAAACCCAAGAGCTTGAT+AGG | + | chr2_4:48260870-48260889 | Msa0331970:CDS | 45.0% | |
| ACCTATCAAGCTCTTGGGTT+TGG | - | chr2_4:48260874-48260893 | None:intergenic | 45.0% | |
| TATATGGTTGTGGTTGCAGC+TGG | + | chr2_4:48260981-48261000 | Msa0331970:intron | 45.0% | |
| ATATGGTTGTGGTTGCAGCT+GGG | + | chr2_4:48260982-48261001 | Msa0331970:intron | 45.0% | |
| !! | GGATTGGATGAGGCTTTTTC+AGG | + | chr2_4:48261004-48261023 | Msa0331970:CDS | 45.0% |
| TATGATTCAAGCTCCCCAGA+TGG | + | chr2_4:48261031-48261050 | Msa0331970:CDS | 45.0% | |
| ! | TTGTCTCTGAGAGGAATAGG+AGG | + | chr2_4:48261086-48261105 | Msa0331970:CDS | 45.0% |
| ACTCTTTGCACTTAGAGCAG+TGG | + | chr2_4:48261126-48261145 | Msa0331970:CDS | 45.0% | |
| AGTGGTCCCAAACATTAGCA+AGG | + | chr2_4:48261144-48261163 | Msa0331970:CDS | 45.0% | |
| GGACTTTACTTCAGGTCGAA+AGG | - | chr2_4:48261774-48261793 | None:intergenic | 45.0% | |
| !! | AGTCCCGATTTTGACAACCT+AGG | + | chr2_4:48261789-48261808 | Msa0331970:intron | 45.0% |
| ! | AAGAGCTTCCTGTGTTGCTA+AGG | + | chr2_4:48262085-48262104 | Msa0331970:CDS | 45.0% |
| TTCTTGGACCTTAGCAACAC+AGG | - | chr2_4:48262096-48262115 | None:intergenic | 45.0% | |
| GGCAATGGTAGCCCTTATTA+AGG | - | chr2_4:48263161-48263180 | None:intergenic | 45.0% | |
| ! | TTCTCTACTAGGGTACCTGA+TGG | - | chr2_4:48263187-48263206 | None:intergenic | 45.0% |
| GCAGCTTAGGGTTACATACA+TGG | + | chr2_4:48263466-48263485 | Msa0331970:intron | 45.0% | |
| ! | GCCAACATCACCTCTTTTTC+AGG | + | chr2_4:48263590-48263609 | Msa0331970:CDS | 45.0% |
| GCCTGAAAAAGAGGTGATGT+TGG | - | chr2_4:48263594-48263613 | None:intergenic | 45.0% | |
| !!! | ACATCACCTCTTTTTCAGGC+AGG | + | chr2_4:48263594-48263613 | Msa0331970:CDS | 45.0% |
| CAAAAGCCTGCCTGAAAAAG+AGG | - | chr2_4:48263603-48263622 | None:intergenic | 45.0% | |
| ! | ATGAATAAGTGGGGTGTCTG+TGG | - | chr2_4:48263891-48263910 | None:intergenic | 45.0% |
| TGTGAGCATAGCTCAGTTGA+CGG | + | chr2_4:48264051-48264070 | Msa0331970:intron | 45.0% | |
| ATGTGAGAAAGGAGTGGCTT+TGG | - | chr2_4:48265843-48265862 | None:intergenic | 45.0% | |
| TCACATCACCCACACCAAAA+TGG | + | chr2_4:48265857-48265876 | Msa0331970:intron | 45.0% | |
| !!! | TAGTGTTTTGGGGCTCGTTA+GGG | + | chr2_4:48265941-48265960 | Msa0331970:intron | 45.0% |
| !! | GTTCCTTAACTTGTGCCCTA+AGG | - | chr2_4:48266061-48266080 | None:intergenic | 45.0% |
| GTTCCTTAACTTATGCCCCA+AGG | + | chr2_4:48266181-48266200 | Msa0331970:intron | 45.0% | |
| !! | TGAGAGTGCTCTCAAAGCAT+TGG | - | chr2_4:48266495-48266514 | None:intergenic | 45.0% |
| ! | CCAACTGATTTACACTCACG+TGG | - | chr2_4:48267963-48267982 | None:intergenic | 45.0% |
| CCACGTGAGTGTAAATCAGT+TGG | + | chr2_4:48267960-48267979 | Msa0331970:intron | 45.0% | |
| GTGAGTGTAAATCAGTTGGC+AGG | + | chr2_4:48267964-48267983 | Msa0331970:intron | 45.0% | |
| ! | AGGTGAATAACTAGGGTGTC+TGG | - | chr2_4:48268027-48268046 | None:intergenic | 45.0% |
| GAGGTCAAGTAACCCTATTG+TGG | + | chr2_4:48268318-48268337 | Msa0331970:intron | 45.0% | |
| GTTCCCCCAGTAATTACTGA+GGG | - | chr2_4:48268550-48268569 | None:intergenic | 45.0% | |
| TGTTCCCCCAGTAATTACTG+AGG | - | chr2_4:48268551-48268570 | None:intergenic | 45.0% | |
| AGGGTCATTAAGAGCTGCAA+TGG | - | chr2_4:48268996-48269015 | None:intergenic | 45.0% | |
| AGATGCTCATAGGGCTTAGA+GGG | - | chr2_4:48269015-48269034 | None:intergenic | 45.0% | |
| TAGATGCTCATAGGGCTTAG+AGG | - | chr2_4:48269016-48269035 | None:intergenic | 45.0% | |
| GCCCTATGAGCATCTAATGA+AGG | + | chr2_4:48269020-48269039 | Msa0331970:exon | 45.0% | |
| TAGCGTGAGTTAACTCACGT+AGG | + | chr2_4:48269157-48269176 | Msa0331970:intron | 45.0% | |
| AGTATAGGATTGAGGAACCG+TGG | + | chr2_4:48269267-48269286 | Msa0331970:three_prime_UTR | 45.0% | |
| !! | AATTACTAATAAATAATTAA+TGG | - | chr2_4:48261193-48261212 | None:intergenic | 5.0% |
| !!! | TATTTATATTTTATTATAGA+CGG | + | chr2_4:48261368-48261387 | Msa0331970:intron | 5.0% |
| !!! | ATATTTAGTATTAATTTTTT+TGG | + | chr2_4:48261631-48261650 | Msa0331970:intron | 5.0% |
| !!! | TATTTAGTATTAATTTTTTT+GGG | + | chr2_4:48261632-48261651 | Msa0331970:intron | 5.0% |
| !!! | TTTTTTTTTTTTTTTTAAGA+TGG | - | chr2_4:48262792-48262811 | None:intergenic | 5.0% |
| !!! | AATATATATTTTTAATAAAG+AGG | - | chr2_4:48263707-48263726 | None:intergenic | 5.0% |
| !!! | GATAATTTTTAAAATAAAAT+TGG | - | chr2_4:48264225-48264244 | None:intergenic | 5.0% |
| !!! | ATTTTATTTTAAAAATTATC+AGG | + | chr2_4:48264225-48264244 | Msa0331970:intron | 5.0% |
| !! | ACAATAATTTAATAATATTT+AGG | + | chr2_4:48265366-48265385 | Msa0331970:intron | 5.0% |
| !! | CAATAATTTAATAATATTTA+GGG | + | chr2_4:48265367-48265386 | Msa0331970:intron | 5.0% |
| !!! | GTTTTTTTTTTTTTTTTTTT+TGG | - | chr2_4:48266969-48266988 | None:intergenic | 5.0% |
| !! | TCAATTAAATTTAATATTTA+AGG | - | chr2_4:48267291-48267310 | None:intergenic | 5.0% |
| !!! | ATTTTTTTAATTCAAAATTA+GGG | + | chr2_4:48268814-48268833 | Msa0331970:intron | 5.0% |
| TATGGTTGTGGTTGCAGCTG+GGG | + | chr2_4:48260983-48261002 | Msa0331970:intron | 50.0% | |
| ! | TGATGATGCTGCACCATCTG+GGG | - | chr2_4:48261047-48261066 | None:intergenic | 50.0% |
| ! | CTGATGATGCTGCACCATCT+GGG | - | chr2_4:48261048-48261067 | None:intergenic | 50.0% |
| CAGTGGGCCAATTTACCTCA+AGG | - | chr2_4:48262176-48262195 | None:intergenic | 50.0% | |
| ! | TACTAGGGTACCTGATGGTG+TGG | - | chr2_4:48263182-48263201 | None:intergenic | 50.0% |
| TAAACCACGCGGTAAGGTCT+TGG | - | chr2_4:48265711-48265730 | None:intergenic | 50.0% | |
| !! | AAAGGAGTGGCTTTGGTGGA+AGG | - | chr2_4:48265836-48265855 | None:intergenic | 50.0% |
| !! | TGAGAAAGGAGTGGCTTTGG+TGG | - | chr2_4:48265840-48265859 | None:intergenic | 50.0% |
| TGGGTGATGTGAGAAAGGAG+TGG | - | chr2_4:48265849-48265868 | None:intergenic | 50.0% | |
| TGGTGTGGGTGATGTGAGAA+AGG | - | chr2_4:48265854-48265873 | None:intergenic | 50.0% | |
| !!! | GTAGTGTTTTGGGGCTCGTT+AGG | + | chr2_4:48265940-48265959 | Msa0331970:intron | 50.0% |
| TGCCCTTAGGGCACAAGTTA+AGG | + | chr2_4:48266055-48266074 | Msa0331970:intron | 50.0% | |
| TGCCCTTGGGGCATAAGTTA+AGG | - | chr2_4:48266187-48266206 | None:intergenic | 50.0% | |
| TTGTGGTTGCAGCTGGGGAT+TGG | + | chr2_4:48260988-48261007 | Msa0331970:intron | 55.0% | |
| TTGCAGCTGGGGATTGGATG+AGG | + | chr2_4:48260994-48261013 | Msa0331970:intron | 55.0% | |
| ! | CCTGATGATGCTGCACCATC+TGG | - | chr2_4:48261049-48261068 | None:intergenic | 55.0% |
| CCAGATGGTGCAGCATCATC+AGG | + | chr2_4:48261046-48261065 | Msa0331970:CDS | 55.0% | |
| GCTACCATTGCCACACCATC+AGG | + | chr2_4:48263169-48263188 | Msa0331970:intron | 55.0% | |
| ! | GGTACCTGATGGTGTGGCAA+TGG | - | chr2_4:48263176-48263195 | None:intergenic | 55.0% |
| ATGACCAAGACCTTACCGCG+TGG | + | chr2_4:48265704-48265723 | Msa0331970:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 48260669 | 48269390 | 48260669 | ID=Msa0331970;Name=Msa0331970 |
| chr2_4 | mRNA | 48260669 | 48269390 | 48260669 | ID=Msa0331970-mRNA-1;Parent=Msa0331970;Name=Msa0331970-mRNA-1;_AED=0.17;_eAED=0.17;_QI=149|1|1|1|0.8|0.66|6|169|244 |
| chr2_4 | exon | 48260669 | 48260891 | 48260669 | ID=Msa0331970-mRNA-1:exon:14524;Parent=Msa0331970-mRNA-1 |
| chr2_4 | exon | 48261000 | 48261165 | 48261000 | ID=Msa0331970-mRNA-1:exon:14525;Parent=Msa0331970-mRNA-1 |
| chr2_4 | exon | 48261946 | 48262179 | 48261946 | ID=Msa0331970-mRNA-1:exon:14526;Parent=Msa0331970-mRNA-1 |
| chr2_4 | exon | 48263470 | 48263640 | 48263470 | ID=Msa0331970-mRNA-1:exon:14527;Parent=Msa0331970-mRNA-1 |
| chr2_4 | exon | 48268947 | 48269041 | 48268947 | ID=Msa0331970-mRNA-1:exon:14528;Parent=Msa0331970-mRNA-1 |
| chr2_4 | exon | 48269227 | 48269390 | 48269227 | ID=Msa0331970-mRNA-1:exon:14529;Parent=Msa0331970-mRNA-1 |
| chr2_4 | five_prime_UTR | 48260669 | 48260817 | 48260669 | ID=Msa0331970-mRNA-1:five_prime_utr;Parent=Msa0331970-mRNA-1 |
| chr2_4 | CDS | 48260818 | 48260891 | 48260818 | ID=Msa0331970-mRNA-1:cds;Parent=Msa0331970-mRNA-1 |
| chr2_4 | CDS | 48261000 | 48261165 | 48261000 | ID=Msa0331970-mRNA-1:cds;Parent=Msa0331970-mRNA-1 |
| chr2_4 | CDS | 48261946 | 48262179 | 48261946 | ID=Msa0331970-mRNA-1:cds;Parent=Msa0331970-mRNA-1 |
| chr2_4 | CDS | 48263470 | 48263640 | 48263470 | ID=Msa0331970-mRNA-1:cds;Parent=Msa0331970-mRNA-1 |
| chr2_4 | CDS | 48268947 | 48269036 | 48268947 | ID=Msa0331970-mRNA-1:cds;Parent=Msa0331970-mRNA-1 |
| chr2_4 | three_prime_UTR | 48269037 | 48269041 | 48269037 | ID=Msa0331970-mRNA-1:three_prime_utr;Parent=Msa0331970-mRNA-1 |
| chr2_4 | three_prime_UTR | 48269227 | 48269390 | 48269227 | ID=Msa0331970-mRNA-1:three_prime_utr;Parent=Msa0331970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
