AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1106590

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1106590 MtrunA17_Chr7g0239061 82.549 659 47 4 1 631 1 619 0.0 1070
Msa1106590 MtrunA17_Chr4g0009751 56.989 651 184 12 13 631 18 604 0.0 642
Msa1106590 MtrunA17_Chr8g0346711 45.030 664 244 14 9 631 24 607 4.55e-170 502
Msa1106590 MtrunA17_Chr2g0276781 56.911 369 126 6 9 346 18 384 1.42e-130 400
Msa1106590 MtrunA17_Chr2g0276781 39.552 134 68 5 497 623 461 588 9.26e-16 81.3
Msa1106590 MtrunA17_Chr8g0385791 53.552 366 129 8 8 339 53 411 3.80e-111 354
Msa1106590 MtrunA17_Chr2g0285461 40.682 381 176 10 6 347 15 384 1.03e-71 249
Msa1106590 MtrunA17_Chr5g0433301 41.081 370 181 9 5 341 15 380 3.23e-71 247
Msa1106590 MtrunA17_Chr4g0046371 38.845 381 174 10 14 347 38 406 7.13e-71 243
Msa1106590 MtrunA17_Chr4g0029671 37.838 370 183 10 12 339 52 416 1.61e-70 244
Msa1106590 MtrunA17_Chr2g0326281 34.968 469 224 14 12 420 54 501 3.35e-70 244
Msa1106590 MtrunA17_Chr8g0376771 40.526 380 177 10 6 347 15 383 7.12e-70 244
Msa1106590 MtrunA17_Chr3g0109391 40.331 362 183 7 11 341 23 382 3.80e-69 241
Msa1106590 MtrunA17_Chr2g0282961 31.889 577 295 18 14 515 53 606 1.42e-63 222
Msa1106590 MtrunA17_Chr1g0156321 39.943 353 161 9 6 318 35 376 3.69e-62 222
Msa1106590 MtrunA17_Chr4g0070181 39.548 354 166 9 6 321 15 358 4.13e-55 203
Msa1106590 MtrunA17_Chr2g0301251 38.873 355 167 10 6 321 15 358 4.23e-55 203
Msa1106590 MtrunA17_Chr8g0389081 38.304 342 175 9 14 322 32 370 8.16e-50 187
Msa1106590 MtrunA17_Chr2g0326761 30.244 410 205 11 8 347 5 403 2.57e-41 160
Msa1106590 MtrunA17_Chr4g0028971 29.234 431 212 14 3 354 1 417 4.31e-38 150
Msa1106590 MtrunA17_Chr7g0264171 28.199 422 209 15 14 353 31 440 5.63e-35 140
Msa1106590 MtrunA17_Chr1g0199681 28.537 410 208 13 3 340 83 479 5.66e-33 135
Msa1106590 MtrunA17_Chr5g0417281 28.286 350 183 10 13 320 10 333 1.08e-30 126
Msa1106590 MtrunA17_Chr7g0264161 32.609 276 148 8 24 267 2 271 1.19e-30 122
Msa1106590 MtrunA17_Chr5g0436761 28.342 374 185 13 3 325 1 342 3.36e-29 121
Msa1106590 MtrunA17_Chr5g0424931 26.494 385 209 13 14 340 19 387 6.70e-28 118
Msa1106590 MtrunA17_Chr3g0115271 41.071 168 95 2 11 178 16 179 1.54e-27 117
Msa1106590 MtrunA17_Chr1g0181211 35.266 207 98 5 14 189 27 228 2.66e-27 117
Msa1106590 MtrunA17_Chr1g0178011 26.575 365 211 12 14 340 12 357 1.79e-25 110
Msa1106590 MtrunA17_Chr8g0356211 30.350 257 129 8 124 340 2 248 2.62e-25 107
Msa1106590 MtrunA17_Chr2g0289221 28.475 295 151 11 14 267 20 295 4.84e-24 104
Msa1106590 MtrunA17_Chr5g0417211 28.621 290 158 10 14 267 12 288 1.22e-23 103
Msa1106590 MtrunA17_Chr5g0424801 23.288 365 235 11 14 345 12 364 1.72e-21 97.1
Msa1106590 MtrunA17_Chr2g0277531 25.347 288 168 9 11 263 17 292 3.60e-20 92.0
Msa1106590 MtrunA17_Chr5g0425261 22.527 364 239 9 14 345 12 364 9.22e-20 92.0
Msa1106590 MtrunA17_Chr5g0425661 32.515 163 102 3 14 173 37 194 2.22e-19 87.8
Msa1106590 MtrunA17_Chr5g0424741 22.826 368 212 12 14 318 12 370 1.01e-18 90.1
Msa1106590 MtrunA17_Chr2g0277461 24.185 368 228 10 14 346 13 364 1.55e-18 89.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1106590 AT4G23980.1 45.688 661 239 17 2 631 1 572 1.27e-157 469
Msa1106590 AT2G46530.1 60.109 366 114 6 8 344 15 377 7.62e-139 419
Msa1106590 AT2G46530.1 38.667 150 67 5 485 631 412 539 1.64e-16 84.0
Msa1106590 AT2G46530.3 60.109 366 114 6 8 344 36 398 1.87e-138 419
Msa1106590 AT2G46530.3 38.667 150 67 5 485 631 433 560 1.70e-16 84.0
Msa1106590 AT3G61830.1 59.563 366 115 6 8 342 19 382 3.54e-138 418
Msa1106590 AT3G61830.1 48.039 102 44 3 530 629 442 536 4.60e-17 85.5
Msa1106590 AT4G23980.2 58.158 380 123 7 2 351 1 374 6.24e-128 392
Msa1106590 AT4G23980.2 38.813 219 110 7 427 631 362 570 3.35e-27 117
Msa1106590 AT1G59750.4 54.696 362 134 5 9 341 17 377 4.31e-122 378
Msa1106590 AT1G59750.4 32.110 218 107 10 440 631 385 587 3.10e-15 79.7
Msa1106590 AT1G59750.2 54.696 362 134 5 9 341 17 377 5.89e-122 378
Msa1106590 AT1G59750.2 31.982 222 116 10 429 631 384 589 5.37e-15 79.3
Msa1106590 AT1G59750.1 54.696 362 134 5 9 341 17 377 1.15e-121 377
Msa1106590 AT1G59750.1 31.944 216 112 10 435 631 393 592 1.15e-14 78.2
Msa1106590 AT1G59750.3 54.696 362 134 5 9 341 17 377 1.15e-121 377
Msa1106590 AT1G59750.3 31.944 216 112 10 435 631 393 592 1.15e-14 78.2
Msa1106590 AT5G62000.2 54.545 363 130 8 8 339 55 413 1.50e-118 375
Msa1106590 AT5G62000.2 29.944 177 103 6 474 631 609 783 5.68e-16 82.4
Msa1106590 AT5G62000.5 54.545 363 130 8 8 339 55 413 1.50e-118 375
Msa1106590 AT5G62000.5 29.944 177 103 6 474 631 609 783 5.68e-16 82.4
Msa1106590 AT5G62000.3 54.545 363 130 8 8 339 55 413 1.50e-118 375
Msa1106590 AT5G62000.3 29.944 177 103 6 474 631 609 783 5.68e-16 82.4
Msa1106590 AT5G62000.1 54.545 363 130 8 8 339 55 413 1.50e-118 375
Msa1106590 AT5G62000.1 29.944 177 103 6 474 631 609 783 5.68e-16 82.4
Msa1106590 AT5G62000.4 54.545 363 130 8 8 339 55 413 1.99e-118 374
Msa1106590 AT5G62000.4 29.944 177 103 6 474 631 609 783 5.23e-16 82.8
Msa1106590 AT3G61830.2 57.958 333 107 6 41 342 1 331 8.31e-116 358
Msa1106590 AT3G61830.2 48.039 102 44 3 530 629 391 485 3.82e-17 85.5
Msa1106590 AT1G35240.1 43.455 382 161 9 5 350 18 380 4.27e-96 308
Msa1106590 AT1G35240.1 43.137 153 59 3 484 633 421 548 2.30e-25 111
Msa1106590 AT1G34410.1 42.894 387 166 9 5 355 18 385 1.28e-95 307
Msa1106590 AT1G34410.1 44.737 152 56 3 484 632 435 561 4.49e-27 117
Msa1106590 AT1G35540.1 42.593 378 180 6 5 355 18 385 1.31e-95 307
Msa1106590 AT1G35540.1 44.156 154 55 6 484 633 435 561 2.50e-25 111
Msa1106590 AT1G35520.1 42.782 381 163 9 11 355 24 385 2.26e-92 298
Msa1106590 AT1G35520.1 42.667 150 58 3 485 631 436 560 2.66e-25 111
Msa1106590 AT1G34310.1 41.799 378 183 6 5 355 18 385 1.04e-91 296
Msa1106590 AT1G34310.1 37.838 185 87 6 460 641 411 570 9.29e-26 112
Msa1106590 AT2G46530.2 55.556 279 93 5 94 344 15 290 1.69e-88 286
Msa1106590 AT2G46530.2 38.667 150 67 5 485 631 325 452 1.10e-16 84.0
Msa1106590 AT1G34390.1 42.894 387 164 10 5 355 18 383 1.19e-87 286
Msa1106590 AT1G34390.1 41.060 151 65 3 484 633 433 560 7.77e-24 107
Msa1106590 AT1G34170.1 39.153 378 179 6 2 337 1 369 6.58e-82 268
Msa1106590 AT1G30330.3 42.328 378 174 12 6 347 17 386 4.47e-71 248
Msa1106590 AT1G30330.2 42.328 378 174 12 6 347 17 386 4.47e-71 248
Msa1106590 AT1G30330.1 42.328 378 174 12 6 347 15 384 6.25e-71 248
Msa1106590 AT5G37020.2 40.270 370 178 11 6 338 12 375 2.88e-68 238
Msa1106590 AT5G37020.1 40.270 370 178 11 6 338 12 375 5.38e-68 238
Msa1106590 AT1G34170.2 36.243 378 164 7 2 337 1 343 1.91e-67 229
Msa1106590 AT5G60450.2 38.462 377 185 12 3 338 30 400 9.77e-67 234
Msa1106590 AT5G60450.2 45.455 66 35 1 567 631 626 691 9.47e-11 65.5
Msa1106590 AT1G34170.3 36.243 378 164 7 2 337 1 343 1.31e-66 229
Msa1106590 AT1G34170.3 65.957 47 16 0 585 631 436 482 1.07e-12 71.6
Msa1106590 AT5G60450.1 39.024 369 178 12 11 338 62 424 1.31e-65 231
Msa1106590 AT5G60450.1 45.455 66 35 1 567 631 650 715 9.87e-11 65.5
Msa1106590 AT1G19850.1 40.401 349 150 11 14 318 54 388 8.97e-62 222
Msa1106590 AT2G33860.1 37.209 344 170 8 14 319 54 389 1.04e-61 217
Msa1106590 AT1G19850.2 40.401 349 150 11 14 318 43 377 1.09e-61 221
Msa1106590 AT1G43950.1 46.890 209 83 4 5 189 18 222 1.35e-55 189
Msa1106590 AT5G20730.2 38.320 381 181 12 6 346 16 382 4.10e-55 204
Msa1106590 AT5G20730.1 38.220 382 181 12 6 346 16 383 7.44e-55 203
Msa1106590 AT5G20730.3 38.220 382 181 12 6 346 16 383 1.06e-54 202
Msa1106590 AT1G19220.1 38.120 383 183 12 4 346 13 381 1.67e-54 202
Msa1106590 AT5G37020.3 38.636 264 123 8 108 338 23 280 2.83e-39 155
Msa1106590 AT2G33860.2 35.573 253 133 5 116 340 2 252 1.65e-38 149
Msa1106590 AT4G30080.1 28.434 415 216 11 3 347 8 411 2.15e-37 149
Msa1106590 AT2G28350.2 40.331 181 93 3 7 178 3 177 8.76e-30 125
Msa1106590 AT2G28350.1 40.331 181 93 3 7 178 3 177 9.26e-30 125
Msa1106590 AT1G77850.2 26.173 405 204 18 10 339 15 399 5.54e-22 100
Msa1106590 AT1G77850.1 26.238 404 205 18 10 339 15 399 6.08e-22 100

Find 160 sgRNAs with CRISPR-Local

Find 337 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTAGTGAAGTTCCAGATTT+TGG 0.144112 7_3:+46737535 Msa1106590:CDS
TTGAGATATCAAACTTATTT+TGG 0.174168 7_3:-46738161 None:intergenic
TTTGAAATGAAAACGATTAT+AGG 0.203421 7_3:-46737581 None:intergenic
ATGCCTTCATCTGTGATTTC+TGG 0.218236 7_3:+46736728 Msa1106590:CDS
ATACATGATAACAGCTTCTT+TGG 0.226689 7_3:-46734427 None:intergenic
AGATCCATCCTAGGAATAAA+TGG 0.234682 7_3:+46738558 Msa1106590:CDS
TGTTGTAAATGTTCATTTAC+TGG 0.251492 7_3:+46735137 Msa1106590:CDS
TTAATGAAGCTAGTCCATTT+TGG 0.265353 7_3:+46739045 Msa1106590:three_prime_UTR
CACACTGGTTGAATTCAAAA+TGG 0.280634 7_3:+46737273 Msa1106590:CDS
TGATCAACTTATTGATGAAT+TGG 0.289870 7_3:+46738511 Msa1106590:CDS
CTGCTGCTGCAAAATATAAA+AGG 0.295589 7_3:+46737503 Msa1106590:CDS
TCCGCTTCCTTACCAAAATC+TGG 0.302105 7_3:-46737547 None:intergenic
TGAAACTTGTCTAGCCAAAA+TGG 0.302786 7_3:-46739059 None:intergenic
TTGCTGAAGGAGTGAGTTCT+TGG 0.304040 7_3:-46735822 None:intergenic
TTGTAGGGAATTCTGCAATA+TGG 0.326044 7_3:+46738846 Msa1106590:intron
TATAAGTGTTAATAAGTATA+TGG 0.342536 7_3:+46736930 Msa1106590:CDS
GAGTATGCGGCAAATGTATT+TGG 0.346072 7_3:+46738087 Msa1106590:CDS
TAGTGATGAGATAGGTAATT+TGG 0.349545 7_3:-46738923 None:intergenic
TGCTTGCTTTGTGTTTCATT+TGG 0.354289 7_3:-46738225 None:intergenic
AAGGAGTGAGTTCTTGGTCT+TGG 0.354402 7_3:-46735816 None:intergenic
CTTAGTGCAACTTCTGCTAT+TGG 0.357778 7_3:-46738250 None:intergenic
CAAACTTTGGAGTCTCTAGA+TGG 0.359004 7_3:-46739117 None:intergenic
CAGTAGGTGACTCTACTTAC+TGG 0.360171 7_3:+46737680 Msa1106590:CDS
ACAATTTCCCATTTATTCCT+AGG 0.375607 7_3:-46738566 None:intergenic
CTACAAGCTGTAGATTGTTC+GGG 0.378856 7_3:+46738022 Msa1106590:CDS
TACATCCTTACATTAGATTC+TGG 0.379009 7_3:-46735664 None:intergenic
TCAAATCGATTCCGGCTAGT+AGG 0.385198 7_3:+46737599 Msa1106590:CDS
TATTAACACTTATAATGAAC+TGG 0.387352 7_3:-46736921 None:intergenic
TCTCATATTCTCAGGTTCAA+TGG 0.392411 7_3:+46737392 Msa1106590:intron
CTTGGTCTTGGAGGTTCAGC+AGG 0.401899 7_3:-46735804 None:intergenic
GCTCCTGAGTTGGAGTAGAT+TGG 0.402220 7_3:-46736034 None:intergenic
GCTACAAGCTGTAGATTGTT+CGG 0.405817 7_3:+46738021 Msa1106590:CDS
TGTAAGGAAACGGCGTTTGT+TGG 0.415039 7_3:-46734465 None:intergenic
CTCATATTCTCAGGTTCAAT+GGG 0.415132 7_3:+46737393 Msa1106590:intron
TCCCATGGTGAAATTCTATC+AGG 0.415551 7_3:-46737439 None:intergenic
GACTCTACTTACTGGGAAGC+TGG 0.422639 7_3:+46737688 Msa1106590:CDS
GTTAGAAGTATCAACAAATC+AGG 0.423287 7_3:+46735062 Msa1106590:intron
AAACAAGATGCTGTTTATAG+AGG 0.425217 7_3:+46736650 Msa1106590:intron
GGACAAGGATCAAGGCTTGT+AGG 0.425783 7_3:-46735783 None:intergenic
ACACGACAAAGGATCTTGTT+GGG 0.429259 7_3:-46735117 None:intergenic
CTCTCTCTCTTGTAAGGAAA+CGG 0.429725 7_3:-46734475 None:intergenic
GCTGTTTATAGAGGGAATAA+TGG 0.431471 7_3:+46736659 Msa1106590:CDS
ATGAACTCTATGAACAGTTA+TGG 0.434802 7_3:+46734776 Msa1106590:CDS
GAGTGAGTTCTTGGTCTTGG+AGG 0.436921 7_3:-46735813 None:intergenic
AATGTTTAGTGTGCTAGTCT+TGG 0.438194 7_3:+46739240 Msa1106590:three_prime_UTR
GTTTCTTCTAGTGATGAGAT+AGG 0.438418 7_3:-46738931 None:intergenic
ATGTTTAGTGTGCTAGTCTT+GGG 0.446813 7_3:+46739241 Msa1106590:three_prime_UTR
GATGAAGGCATGCAGCTTTG+TGG 0.446909 7_3:-46736716 None:intergenic
TGTGTTTCATTTGGAGATAT+CGG 0.452653 7_3:-46738216 None:intergenic
CTCCTGAGTTGGAGTAGATT+GGG 0.454584 7_3:-46736033 None:intergenic
CACTTTAAGCATATATTTCG+AGG 0.457499 7_3:+46736089 Msa1106590:CDS
AACACGACAAAGGATCTTGT+TGG 0.463301 7_3:-46735118 None:intergenic
AGCACAATGATGATGAATAA+TGG 0.463577 7_3:+46734745 Msa1106590:exon
TGGTCCTTCTCATTTGTGTC+AGG 0.463957 7_3:+46737873 Msa1106590:CDS
GGTGAAATTCTATCAGGTCT+TGG 0.465108 7_3:-46737433 None:intergenic
TGTAGGAACAGAAGCCAGAA+GGG 0.465767 7_3:-46737470 None:intergenic
CACTGAATGTCTTCCCTCAC+TGG 0.466631 7_3:+46735905 Msa1106590:CDS
AGAGGAAAATATTGAGATTG+TGG 0.466631 7_3:+46739178 Msa1106590:three_prime_UTR
ATAAATTAAGTAGGTGAGAG+AGG 0.468584 7_3:+46739160 Msa1106590:three_prime_UTR
GATAGCCAACTTCCGTCAGT+TGG 0.476846 7_3:-46737835 None:intergenic
AACTCAGGAGCTGGTTGCTA+AGG 0.480484 7_3:+46736046 Msa1106590:CDS
TCAAATGCAGGGTGTTGCAG+TGG 0.481218 7_3:+46738454 Msa1106590:CDS
GGAGAAGCTGTTTGACATGA+AGG 0.481393 7_3:+46738532 Msa1106590:CDS
ATGGGAGATAGAACCCCTTC+TGG 0.482103 7_3:+46737456 Msa1106590:CDS
GTGAAAAGTGAAAAGTGAAA+AGG 0.483513 7_3:+46734709 Msa1106590:five_prime_UTR
TTTCCCATTTATTCCTAGGA+TGG 0.483618 7_3:-46738562 None:intergenic
TAGCAAGAGTGTTGCAGTCT+CGG 0.485791 7_3:+46737909 Msa1106590:CDS
CAAATCGATTCCGGCTAGTA+GGG 0.486132 7_3:+46737600 Msa1106590:CDS
CATGTTGAAGTTCCTCGTGC+TGG 0.488356 7_3:+46734817 Msa1106590:CDS
CTGTCAAAAGGTTCAAATGC+AGG 0.492047 7_3:+46738442 Msa1106590:intron
CCAAAATCTGGAACTTCACT+AGG 0.492420 7_3:-46737535 None:intergenic
CTGCAAAATATAAAAGGCCT+AGG 0.493667 7_3:+46737509 Msa1106590:CDS
GATCCATCCTAGGAATAAAT+GGG 0.495100 7_3:+46738559 Msa1106590:CDS
GATGTGCACAAAATGAGCTC+AGG 0.496139 7_3:+46738898 Msa1106590:CDS
GCTAGTAGGGTTAGACTTGG+TGG 0.497965 7_3:+46737613 Msa1106590:CDS
TTGTCATCATCATCATGTAC+TGG 0.498888 7_3:-46734632 None:intergenic
ATGTTATGTCTGAAAACATA+AGG 0.505197 7_3:+46737743 Msa1106590:CDS
GTCTGCATCAGTTCTTGACA+TGG 0.513254 7_3:-46738139 None:intergenic
TCTCAAAGGCTTCAAAAGAA+AGG 0.513575 7_3:+46738178 Msa1106590:CDS
GGAATCCAACTGACGGAAGT+TGG 0.516963 7_3:+46737830 Msa1106590:CDS
TGTTGCAGTGGGTCGTGCGG+TGG 0.520688 7_3:+46738466 Msa1106590:CDS
ATCTACTCCAACTCAGGAGC+TGG 0.520849 7_3:+46736037 Msa1106590:CDS
GTCCCAATCTACTCCAACTC+AGG 0.524139 7_3:+46736031 Msa1106590:CDS
GGAGTGACGGTATGCATTTG+TGG 0.525970 7_3:+46737764 Msa1106590:CDS
GTTCAGCAGGACAAGGATCA+AGG 0.528735 7_3:-46735791 None:intergenic
TGACCAGAAATCACAGATGA+AGG 0.529054 7_3:-46736731 None:intergenic
TTGTAGTATACTACAAGCCC+AGG 0.533426 7_3:+46736813 Msa1106590:CDS
AGGATCTTCACAATTATGAA+TGG 0.534136 7_3:+46736066 Msa1106590:CDS
CCGGCTAGTAGGGTTAGACT+TGG 0.545920 7_3:+46737610 Msa1106590:CDS
GATGGTGTTATTACCAGTGA+GGG 0.550345 7_3:-46735918 None:intergenic
AGAGTTATATTTGATCAAAG+TGG 0.551737 7_3:+46734687 Msa1106590:five_prime_UTR
ACTGATAATAGCAGCTGCAA+TGG 0.552706 7_3:+46737799 Msa1106590:CDS
AACAAGATGCTGTTTATAGA+GGG 0.553985 7_3:+46736651 Msa1106590:intron
TTAGCAACCAGCTCCTGAGT+TGG 0.554459 7_3:-46736044 None:intergenic
AGAGTGTTGCAGTCTCGGCT+TGG 0.558474 7_3:+46737914 Msa1106590:CDS
ACTCTACTTACTGGGAAGCT+GGG 0.561376 7_3:+46737689 Msa1106590:CDS
AACTCTGATACAAGTACTCA+CGG 0.562598 7_3:+46735855 Msa1106590:CDS
CTATCTTCTCCTCATTCAAG+TGG 0.562928 7_3:+46737853 Msa1106590:CDS
ATGTAGGAACAGAAGCCAGA+AGG 0.565082 7_3:-46737471 None:intergenic
GGAACTTCACTAGGTAGCCT+AGG 0.566595 7_3:-46737526 None:intergenic
CAATAGCAGAAGTTGCACTA+AGG 0.566869 7_3:+46738251 Msa1106590:CDS
ATTCTCCTGAGACTGACAAA+AGG 0.574746 7_3:+46737013 Msa1106590:CDS
CTTGGAGGTTCAGCAGGACA+AGG 0.574769 7_3:-46735798 None:intergenic
TTCAAAATGGAGATCACTCA+AGG 0.575917 7_3:+46737286 Msa1106590:CDS
GTTAGTTAAGACCTTGCTGA+AGG 0.576070 7_3:-46735835 None:intergenic
TGAAGGGACAGATCCATCCT+AGG 0.576311 7_3:+46738549 Msa1106590:CDS
GCAGCAGGTTGAATAGATGT+AGG 0.578610 7_3:-46737487 None:intergenic
ATGCAGTTGCAAGGACTCCA+AGG 0.579047 7_3:-46736763 None:intergenic
TGAGAAGGACCACTTGAATG+AGG 0.580259 7_3:-46737862 None:intergenic
GTGGACTTGACCGCGTTGGA+TGG 0.587025 7_3:+46738485 Msa1106590:CDS
CAAATGCAGGGTGTTGCAGT+GGG 0.591983 7_3:+46738455 Msa1106590:CDS
GTATTTGGAGTCACCTCTGA+GGG 0.593824 7_3:+46738102 Msa1106590:CDS
AGTAGGTGACTCTACTTACT+GGG 0.594207 7_3:+46737681 Msa1106590:CDS
ATCAGTTCTTGACATGGGAG+CGG 0.595334 7_3:-46738133 None:intergenic
TGTCAAAAGGTTCAAATGCA+GGG 0.595922 7_3:+46738443 Msa1106590:intron
TCTGCATCAGTTCTTGACAT+GGG 0.598480 7_3:-46738138 None:intergenic
GAGAAGCTGTTTGACATGAA+GGG 0.603135 7_3:+46738533 Msa1106590:CDS
AAATAAGTTTGATATCTCAA+AGG 0.603379 7_3:+46738164 Msa1106590:CDS
CAGCATGAGATGCAGTTGCA+AGG 0.603675 7_3:-46736772 None:intergenic
AAGAGGATATTTCTTCACAC+TGG 0.605848 7_3:+46737258 Msa1106590:intron
GAGAACTACGCGTTGGTGTG+AGG 0.608200 7_3:+46736681 Msa1106590:CDS
GTTGACTGACCATGTTGTCA+AGG 0.608254 7_3:+46737981 Msa1106590:CDS
TGGACTACTGAAAATATCAA+AGG 0.608527 7_3:-46737319 None:intergenic
ATGTGCACAAAATGAGCTCA+GGG 0.609204 7_3:+46738899 Msa1106590:CDS
ACCTGATAGAATTTCACCAT+GGG 0.610284 7_3:+46737438 Msa1106590:CDS
ACTTGTTCCATATGTCCTTG+AGG 0.614119 7_3:-46734859 None:intergenic
ACCTTCTGAGTGTTCGTGCG+AGG 0.615187 7_3:-46738060 None:intergenic
TGCGGTGGACTTGACCGCGT+TGG 0.615624 7_3:+46738481 Msa1106590:CDS
AGAAGGGGTTCTATCTCCCA+TGG 0.616888 7_3:-46737454 None:intergenic
GGGTGTTGCAGTGGGTCGTG+CGG 0.626070 7_3:+46738463 Msa1106590:CDS
TCAGAAGGTGTCTGAGTATG+CGG 0.626298 7_3:+46738074 Msa1106590:CDS
CAGTTATGGAAAGCTTGTGC+TGG 0.627540 7_3:+46734790 Msa1106590:CDS
AGTGTGTGTTTCTGTCTGAA+AGG 0.629254 7_3:+46734506 Msa1106590:five_prime_UTR
GAACATTTACAACACGACAA+AGG 0.630223 7_3:-46735128 None:intergenic
CAAATCAGGAACTAAATCAG+AGG 0.630877 7_3:+46735076 Msa1106590:CDS
TCTGGTCAGAGCATGCACCT+TGG 0.631687 7_3:+46736746 Msa1106590:CDS
TTGTTGGGGAGTTTGAACAA+TGG 0.631762 7_3:-46735102 None:intergenic
CCAAGTCTAACCCTACTAGC+CGG 0.635415 7_3:-46737610 None:intergenic
CAGTGAGGGAAGACATTCAG+TGG 0.635444 7_3:-46735904 None:intergenic
TCTGAAAACATAAGGAGTGA+CGG 0.636576 7_3:+46737751 Msa1106590:CDS
GCGTCCTGACACAAATGAGA+AGG 0.638010 7_3:-46737877 None:intergenic
CACGACAAAGGATCTTGTTG+GGG 0.639091 7_3:-46735116 None:intergenic
GGTTTATGCACAGATAACTC+TGG 0.642878 7_3:+46735639 Msa1106590:CDS
AGCGGCAACGCATCCCTCAG+AGG 0.650317 7_3:-46738115 None:intergenic
TCCTCGCACGAACACTCAGA+AGG 0.655316 7_3:+46738059 Msa1106590:CDS
AATAATGGAGAACTACGCGT+TGG 0.655957 7_3:+46736674 Msa1106590:CDS
TGTATTTGGAGTCACCTCTG+AGG 0.658303 7_3:+46738101 Msa1106590:CDS
GCACGAGGAACTTCAACATG+AGG 0.659171 7_3:-46734814 None:intergenic
AGATGGTGTTATTACCAGTG+AGG 0.662485 7_3:-46735919 None:intergenic
GACCTGATAGAATTTCACCA+TGG 0.666067 7_3:+46737437 Msa1106590:CDS
GGCTGAACAAGAAACAGATG+AGG 0.666478 7_3:+46735618 Msa1106590:intron
TTCAAAGGAGACACGACAGT+AGG 0.670054 7_3:+46737664 Msa1106590:CDS
ATATCGAGGAATCCAACTGA+CGG 0.672838 7_3:+46737823 Msa1106590:CDS
GTAGGAACAGAAGCCAGAAG+GGG 0.675216 7_3:-46737469 None:intergenic
AAGAACTCACTCCTTCAGCA+AGG 0.678844 7_3:+46735824 Msa1106590:CDS
GCAGCTGCAATGGTATATCG+AGG 0.681915 7_3:+46737809 Msa1106590:CDS
AAAACTCTTTGTCCAGCACG+AGG 0.695811 7_3:-46734829 None:intergenic
TGTCAAGGAGAACAAAACTG+AGG 0.748086 7_3:+46737996 Msa1106590:CDS
TTGATCATAACCATCCAACG+CGG 0.801658 7_3:-46738495 None:intergenic
TCTGATACAAGTACTCACGG+TGG 0.835491 7_3:+46735858 Msa1106590:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTTCAAACTT+TGG - chr7_3:46739133-46739152 None:intergenic 10.0%
!!! AATGTTTTAATAAATTAAGT+AGG + chr7_3:46739151-46739170 Msa1106590:three_prime_UTR 10.0%
!!! TAGTCTTTTGTATTATAAAA+TGG + chr7_3:46734397-46734416 Msa1106590:five_prime_UTR 15.0%
!!! CTTGATTTTATTTTTTGTTT+TGG + chr7_3:46734988-46735007 Msa1106590:intron 15.0%
!!! TTTATTTTTTGTTTTGGTTA+AGG + chr7_3:46734994-46735013 Msa1106590:intron 15.0%
!!! ATGTGTTAATCTTTTAATTT+TGG + chr7_3:46735273-46735292 Msa1106590:intron 15.0%
!!! TGTGTTAATCTTTTAATTTT+GGG + chr7_3:46735274-46735293 Msa1106590:intron 15.0%
!! TCATAATCATTAAAATTAGT+GGG - chr7_3:46735328-46735347 None:intergenic 15.0%
!! TATAAGTGTTAATAAGTATA+TGG + chr7_3:46736930-46736949 Msa1106590:CDS 15.0%
!!! ATTGGTATTATTATTTTGTA+GGG + chr7_3:46738831-46738850 Msa1106590:intron 15.0%
!!! CTTACTTTATATGTTTTTTG+TGG + chr7_3:46735034-46735053 Msa1106590:intron 20.0%
!! AAACAATAAGAAGAATTCTT+TGG + chr7_3:46735201-46735220 Msa1106590:intron 20.0%
!! GTCATAATCATTAAAATTAG+TGG - chr7_3:46735329-46735348 None:intergenic 20.0%
!!! TTTTAATGATTATGACTATC+TGG + chr7_3:46735333-46735352 Msa1106590:intron 20.0%
!!! AGGTTGTTTTTATTACAATT+TGG + chr7_3:46735362-46735381 Msa1106590:intron 20.0%
!!! GGTTGTTTTTATTACAATTT+GGG + chr7_3:46735363-46735382 Msa1106590:intron 20.0%
!! TCTTCTTTGATTATATGAAT+AGG + chr7_3:46735549-46735568 Msa1106590:intron 20.0%
!! CTTCTTTGATTATATGAATA+GGG + chr7_3:46735550-46735569 Msa1106590:intron 20.0%
!! TTCTTTGATTATATGAATAG+GGG + chr7_3:46735551-46735570 Msa1106590:intron 20.0%
!!! TTGAATTTTGACATGTTTAT+AGG + chr7_3:46735597-46735616 Msa1106590:intron 20.0%
!!! TTCACAAATTTTTTCCAATT+TGG + chr7_3:46735691-46735710 Msa1106590:intron 20.0%
!! AATTGGAGAAAAGAAATTTA+AGG - chr7_3:46735721-46735740 None:intergenic 20.0%
!! TTGTGTTAATATATCCAAAT+TGG + chr7_3:46735962-46735981 Msa1106590:intron 20.0%
!! TAAACATTTACAAACCAATT+TGG - chr7_3:46735979-46735998 None:intergenic 20.0%
!!! AATATCTTGAGTCTTTTTAA+TGG - chr7_3:46736217-46736236 None:intergenic 20.0%
!!! CTTTTGATGTAAATTTTTGT+TGG - chr7_3:46736278-46736297 None:intergenic 20.0%
!!! TTTTAGTAAAAGTTTTACCT+GGG - chr7_3:46736833-46736852 None:intergenic 20.0%
!!! TTTTTAGTAAAAGTTTTACC+TGG - chr7_3:46736834-46736853 None:intergenic 20.0%
!! TATTAACACTTATAATGAAC+TGG - chr7_3:46736924-46736943 None:intergenic 20.0%
!! TCTTGGAATATATAATGAAA+AGG - chr7_3:46737072-46737091 None:intergenic 20.0%
!!! AATTAAGTTGTTTATCCAAA+CGG - chr7_3:46737095-46737114 None:intergenic 20.0%
!!! GTATTAGAAAGGATTATTTT+TGG - chr7_3:46737204-46737223 None:intergenic 20.0%
!! AAAATAATCCTTTCTAATAC+TGG + chr7_3:46737204-46737223 Msa1106590:intron 20.0%
!!! TTTGAAATGAAAACGATTAT+AGG - chr7_3:46737584-46737603 None:intergenic 20.0%
!!! TTGAGATATCAAACTTATTT+TGG - chr7_3:46738164-46738183 None:intergenic 20.0%
!! AAATAAGTTTGATATCTCAA+AGG + chr7_3:46738164-46738183 Msa1106590:CDS 20.0%
!!! CTAACTATACTAAGATTTTT+CGG - chr7_3:46738327-46738346 None:intergenic 20.0%
!! AGTATAGTTAGTAATATGTT+AGG + chr7_3:46738336-46738355 Msa1106590:intron 20.0%
!! TAGTATTCAAATTAATAGTG+AGG - chr7_3:46738806-46738825 None:intergenic 20.0%
!!! CATTGGTATTATTATTTTGT+AGG + chr7_3:46738830-46738849 Msa1106590:intron 20.0%
! AGAGTTATATTTGATCAAAG+TGG + chr7_3:46734687-46734706 Msa1106590:five_prime_UTR 25.0%
! TGTTGTAAATGTTCATTTAC+TGG + chr7_3:46735137-46735156 Msa1106590:CDS 25.0%
!! TCTTATTGTTTTCTCCAAAA+GGG - chr7_3:46735192-46735211 None:intergenic 25.0%
!! TTCTTATTGTTTTCTCCAAA+AGG - chr7_3:46735193-46735212 None:intergenic 25.0%
!! TGGTGTTTTGTAATAATTCA+TGG + chr7_3:46735221-46735240 Msa1106590:intron 25.0%
!! GGTGTTTTGTAATAATTCAT+GGG + chr7_3:46735222-46735241 Msa1106590:intron 25.0%
!!! TTTTTGTCTTTTTTACCCTT+TGG + chr7_3:46735396-46735415 Msa1106590:intron 25.0%
!! AAATTTAAGGTTGACCAAAT+TGG - chr7_3:46735708-46735727 None:intergenic 25.0%
!!! TTTCTTTTCTCCAATTTGTT+TGG + chr7_3:46735725-46735744 Msa1106590:intron 25.0%
! CATTAGAAATCCAAACAAAT+TGG - chr7_3:46735738-46735757 None:intergenic 25.0%
!! CAATTTGTTTGGATTTCTAA+TGG + chr7_3:46735736-46735755 Msa1106590:intron 25.0%
! ATGTTTAGTAAAACTATGTC+TGG + chr7_3:46735992-46736011 Msa1106590:intron 25.0%
! GAAAGGAAAATCTTAGAATT+TGG - chr7_3:46736420-46736439 None:intergenic 25.0%
!! TAAGATTTTCCTTTCTATTC+AGG + chr7_3:46736425-46736444 Msa1106590:intron 25.0%
! ATCAACCAAAAATTTAGTGT+TGG + chr7_3:46736958-46736977 Msa1106590:CDS 25.0%
! CAAACTACAGAAATAAAACA+TGG - chr7_3:46737041-46737060 None:intergenic 25.0%
! ATTTGAAAGTTGAAACAAAG+TGG - chr7_3:46737342-46737361 None:intergenic 25.0%
! TTGTTTCAACTTTCAAATGA+TGG + chr7_3:46737344-46737363 Msa1106590:intron 25.0%
!!! TTTTCATTTCAAATCGATTC+CGG + chr7_3:46737591-46737610 Msa1106590:CDS 25.0%
!!! GTTTTCATTTCACTTTTCAA+AGG + chr7_3:46737649-46737668 Msa1106590:CDS 25.0%
! ATGTTATGTCTGAAAACATA+AGG + chr7_3:46737743-46737762 Msa1106590:CDS 25.0%
! CCATGTAAATAAACAATGTA+TGG - chr7_3:46738284-46738303 None:intergenic 25.0%
! CCATACATTGTTTATTTACA+TGG + chr7_3:46738281-46738300 Msa1106590:intron 25.0%
! TGATCAACTTATTGATGAAT+TGG + chr7_3:46738511-46738530 Msa1106590:CDS 25.0%
! AATTTGAATACTATGTGCAT+TGG + chr7_3:46738813-46738832 Msa1106590:intron 25.0%
ATACATGATAACAGCTTCTT+TGG - chr7_3:46734430-46734449 None:intergenic 30.0%
GTGAAAAGTGAAAAGTGAAA+AGG + chr7_3:46734709-46734728 Msa1106590:five_prime_UTR 30.0%
! AGCACAATGATGATGAATAA+TGG + chr7_3:46734745-46734764 Msa1106590:exon 30.0%
ATGAACTCTATGAACAGTTA+TGG + chr7_3:46734776-46734795 Msa1106590:CDS 30.0%
! AGAGTTTTCTATTTTCCTCA+AGG + chr7_3:46734844-46734863 Msa1106590:CDS 30.0%
! TGTTCTTTTTGTTGAGTCTT+AGG + chr7_3:46734918-46734937 Msa1106590:intron 30.0%
!! GTTAGAAGTATCAACAAATC+AGG + chr7_3:46735062-46735081 Msa1106590:intron 30.0%
! TCCTATTTTCTTTTCCCTTT+TGG + chr7_3:46735175-46735194 Msa1106590:intron 30.0%
TCCAAAAGGGAAAAGAAAAT+AGG - chr7_3:46735179-46735198 None:intergenic 30.0%
!! TGGGTTTAGTTTCCAATTTT+TGG + chr7_3:46735293-46735312 Msa1106590:intron 30.0%
! TTATGACTATCTGGATTTTG+AGG + chr7_3:46735342-46735361 Msa1106590:intron 30.0%
GTGAATGATGCTTAGAATTT+GGG + chr7_3:46735478-46735497 Msa1106590:intron 30.0%
TACATCCTTACATTAGATTC+TGG - chr7_3:46735667-46735686 None:intergenic 30.0%
!! CTCAGTTTGCTAAGAAAATT+TGG - chr7_3:46735763-46735782 None:intergenic 30.0%
! TGGTAATAACACCATCTTTT+TGG + chr7_3:46735925-46735944 Msa1106590:intron 30.0%
!! ACTATGTCTGGATTTTGTTT+AGG + chr7_3:46736004-46736023 Msa1106590:intron 30.0%
AGGATCTTCACAATTATGAA+TGG + chr7_3:46736066-46736085 Msa1106590:CDS 30.0%
CACTTTAAGCATATATTTCG+AGG + chr7_3:46736089-46736108 Msa1106590:CDS 30.0%
! GACTCAAGATATTTGTCTTT+TGG + chr7_3:46736224-46736243 Msa1106590:intron 30.0%
ACTTGAATGAAGAATACTCT+TGG + chr7_3:46736249-46736268 Msa1106590:intron 30.0%
! TTTTGTTAAACCACTACTAG+TGG + chr7_3:46736311-46736330 Msa1106590:intron 30.0%
CATGTTCAAGAGAAAACATT+AGG - chr7_3:46736337-46736356 None:intergenic 30.0%
! ACTTCAAAAAGATTAGTTGC+TGG + chr7_3:46736494-46736513 Msa1106590:intron 30.0%
! AAACAAGATGCTGTTTATAG+AGG + chr7_3:46736650-46736669 Msa1106590:intron 30.0%
! AACAAGATGCTGTTTATAGA+GGG + chr7_3:46736651-46736670 Msa1106590:intron 30.0%
CAAAATTTATCCACGAAAGA+CGG - chr7_3:46736867-46736886 None:intergenic 30.0%
!! TTCGTGGATAAATTTTGACA+AGG + chr7_3:46736870-46736889 Msa1106590:intron 30.0%
!! TCGTGGATAAATTTTGACAA+GGG + chr7_3:46736871-46736890 Msa1106590:intron 30.0%
!!! GGATTCTTTTTTGTTTGCTT+AGG + chr7_3:46736893-46736912 Msa1106590:intron 30.0%
! TCATGCCAACACTAAATTTT+TGG - chr7_3:46736966-46736985 None:intergenic 30.0%
!! AAAAATTTAGTGTTGGCATG+AGG + chr7_3:46736965-46736984 Msa1106590:CDS 30.0%
!! AGGTTTAAGATGAGTTTTGA+TGG + chr7_3:46736985-46737004 Msa1106590:CDS 30.0%
!! GGTTTAAGATGAGTTTTGAT+GGG + chr7_3:46736986-46737005 Msa1106590:CDS 30.0%
!! GTTTAAGATGAGTTTTGATG+GGG + chr7_3:46736987-46737006 Msa1106590:CDS 30.0%
! TATTTCTGTAGTTTGCAACA+TGG + chr7_3:46737046-46737065 Msa1106590:intron 30.0%
TTATATATTCCAAGACCGTT+TGG + chr7_3:46737077-46737096 Msa1106590:intron 30.0%
!! AGATTTTCTGGCACAATAAT+TGG + chr7_3:46737233-46737252 Msa1106590:intron 30.0%
TGGACTACTGAAAATATCAA+AGG - chr7_3:46737322-46737341 None:intergenic 30.0%
!!! TCTGAGTGAGTTTTTGAAAT+AGG - chr7_3:46737940-46737959 None:intergenic 30.0%
TGTGTTTCATTTGGAGATAT+CGG - chr7_3:46738219-46738238 None:intergenic 30.0%
CAATCCACTATTTAACTCTA+TGG + chr7_3:46738388-46738407 Msa1106590:intron 30.0%
ACAATTTCCCATTTATTCCT+AGG - chr7_3:46738569-46738588 None:intergenic 30.0%
TTTGTGTAAAGAGATACTCA+CGG - chr7_3:46738641-46738660 None:intergenic 30.0%
TTACACAAAATTAACCCACT+TGG + chr7_3:46738652-46738671 Msa1106590:intron 30.0%
TAGTGATGAGATAGGTAATT+TGG - chr7_3:46738926-46738945 None:intergenic 30.0%
! TTAATGAAGCTAGTCCATTT+TGG + chr7_3:46739045-46739064 Msa1106590:three_prime_UTR 30.0%
ATAAATTAAGTAGGTGAGAG+AGG + chr7_3:46739160-46739179 Msa1106590:three_prime_UTR 30.0%
AGAGGAAAATATTGAGATTG+TGG + chr7_3:46739178-46739197 Msa1106590:three_prime_UTR 30.0%
TTGTCATCATCATCATGTAC+TGG - chr7_3:46734635-46734654 None:intergenic 35.0%
! CTATTTTCCTCAAGGACATA+TGG + chr7_3:46734852-46734871 Msa1106590:CDS 35.0%
ATGTGTTGTGTTAAGATGCT+TGG + chr7_3:46734951-46734970 Msa1106590:intron 35.0%
CAAATCAGGAACTAAATCAG+AGG + chr7_3:46735076-46735095 Msa1106590:CDS 35.0%
GAACATTTACAACACGACAA+AGG - chr7_3:46735131-46735150 None:intergenic 35.0%
GGGAAAAGAAAATAGGATGA+AGG - chr7_3:46735172-46735191 None:intergenic 35.0%
GGGAGAACATTACCAAAAAT+TGG - chr7_3:46735308-46735327 None:intergenic 35.0%
CGGTCAAACTCTAAATTATC+AGG - chr7_3:46735438-46735457 None:intergenic 35.0%
CGTGAATGATGCTTAGAATT+TGG + chr7_3:46735477-46735496 Msa1106590:intron 35.0%
TGATTATATGAATAGGGGTG+TGG + chr7_3:46735556-46735575 Msa1106590:intron 35.0%
! GATTATATGAATAGGGGTGT+GGG + chr7_3:46735557-46735576 Msa1106590:intron 35.0%
TGGTACCAGAATCTAATGTA+AGG + chr7_3:46735659-46735678 Msa1106590:intron 35.0%
AACTCTGATACAAGTACTCA+CGG + chr7_3:46735855-46735874 Msa1106590:CDS 35.0%
CAGTACAAAAGCCAAAAAGA+TGG - chr7_3:46735939-46735958 None:intergenic 35.0%
! ATGTGTTGATCCAAGTAGAA+GGG + chr7_3:46736137-46736156 Msa1106590:intron 35.0%
TCAGATTTCCCAAGTATATG+TGG + chr7_3:46736162-46736181 Msa1106590:intron 35.0%
CATCGTCAATTATTGAACTG+AGG - chr7_3:46736189-46736208 None:intergenic 35.0%
AAGTCCCACATTAGATAAGT+CGG + chr7_3:46736368-46736387 Msa1106590:intron 35.0%
!! AACACCGACTTATCTAATGT+GGG - chr7_3:46736375-46736394 None:intergenic 35.0%
!! ATTAGATAAGTCGGTGTTGT+AGG + chr7_3:46736377-46736396 Msa1106590:intron 35.0%
!! TTAGATAAGTCGGTGTTGTA+GGG + chr7_3:46736378-46736397 Msa1106590:intron 35.0%
GCTGTTTATAGAGGGAATAA+TGG + chr7_3:46736659-46736678 Msa1106590:CDS 35.0%
!! CGTGGATAAATTTTGACAAG+GGG + chr7_3:46736872-46736891 Msa1106590:intron 35.0%
CTGATGAACCAGTATTAGAA+AGG - chr7_3:46737215-46737234 None:intergenic 35.0%
!!! TACTGGTTCATCAGATTTTC+TGG + chr7_3:46737221-46737240 Msa1106590:intron 35.0%
AAGAGGATATTTCTTCACAC+TGG + chr7_3:46737258-46737277 Msa1106590:intron 35.0%
! CACACTGGTTGAATTCAAAA+TGG + chr7_3:46737273-46737292 Msa1106590:CDS 35.0%
TTCAAAATGGAGATCACTCA+AGG + chr7_3:46737286-46737305 Msa1106590:CDS 35.0%
TCTCATATTCTCAGGTTCAA+TGG + chr7_3:46737392-46737411 Msa1106590:intron 35.0%
CTCATATTCTCAGGTTCAAT+GGG + chr7_3:46737393-46737412 Msa1106590:intron 35.0%
ACCTGATAGAATTTCACCAT+GGG + chr7_3:46737438-46737457 Msa1106590:CDS 35.0%
! CTTTTATATTTTGCAGCAGC+AGG - chr7_3:46737505-46737524 None:intergenic 35.0%
CTGCTGCTGCAAAATATAAA+AGG + chr7_3:46737503-46737522 Msa1106590:CDS 35.0%
CTGCAAAATATAAAAGGCCT+AGG + chr7_3:46737509-46737528 Msa1106590:CDS 35.0%
!! TGAAGTTCCAGATTTTGGTA+AGG + chr7_3:46737540-46737559 Msa1106590:CDS 35.0%
TCTGAAAACATAAGGAGTGA+CGG + chr7_3:46737751-46737770 Msa1106590:CDS 35.0%
! TTTTGTTCTCCTTGACAACA+TGG - chr7_3:46737993-46738012 None:intergenic 35.0%
TCTCAAAGGCTTCAAAAGAA+AGG + chr7_3:46738178-46738197 Msa1106590:CDS 35.0%
TGCTTGCTTTGTGTTTCATT+TGG - chr7_3:46738228-46738247 None:intergenic 35.0%
TGGATTGATAAAGAGAACGA+TGG - chr7_3:46738375-46738394 None:intergenic 35.0%
TAGGCCATAGAGTTAAATAG+TGG - chr7_3:46738395-46738414 None:intergenic 35.0%
CACAATGAACAATTCAGAGT+AGG - chr7_3:46738414-46738433 None:intergenic 35.0%
TGTGTTCAAAACCTGTCAAA+AGG + chr7_3:46738430-46738449 Msa1106590:intron 35.0%
TGTCAAAAGGTTCAAATGCA+GGG + chr7_3:46738443-46738462 Msa1106590:intron 35.0%
AGATCCATCCTAGGAATAAA+TGG + chr7_3:46738558-46738577 Msa1106590:CDS 35.0%
GATCCATCCTAGGAATAAAT+GGG + chr7_3:46738559-46738578 Msa1106590:CDS 35.0%
TTTCCCATTTATTCCTAGGA+TGG - chr7_3:46738565-46738584 None:intergenic 35.0%
! ATTGTCTTCACTGATGATGA+AGG + chr7_3:46738584-46738603 Msa1106590:intron 35.0%
! TTGTCTTCACTGATGATGAA+GGG + chr7_3:46738585-46738604 Msa1106590:intron 35.0%
CAAAATTAACCCACTTGGAT+TGG + chr7_3:46738657-46738676 Msa1106590:intron 35.0%
TTGTAGGGAATTCTGCAATA+TGG + chr7_3:46738846-46738865 Msa1106590:intron 35.0%
GTTTCTTCTAGTGATGAGAT+AGG - chr7_3:46738934-46738953 None:intergenic 35.0%
TGAAACTTGTCTAGCCAAAA+TGG - chr7_3:46739062-46739081 None:intergenic 35.0%
! AATGTTTAGTGTGCTAGTCT+TGG + chr7_3:46739240-46739259 Msa1106590:three_prime_UTR 35.0%
!! ATGTTTAGTGTGCTAGTCTT+GGG + chr7_3:46739241-46739260 Msa1106590:three_prime_UTR 35.0%
CTCTCTCTCTTGTAAGGAAA+CGG - chr7_3:46734478-46734497 None:intergenic 40.0%
! AGTGTGTGTTTCTGTCTGAA+AGG + chr7_3:46734506-46734525 Msa1106590:five_prime_UTR 40.0%
ACTTGTTCCATATGTCCTTG+AGG - chr7_3:46734862-46734881 None:intergenic 40.0%
TTGTTGGGGAGTTTGAACAA+TGG - chr7_3:46735105-46735124 None:intergenic 40.0%
ACACGACAAAGGATCTTGTT+GGG - chr7_3:46735120-46735139 None:intergenic 40.0%
AACACGACAAAGGATCTTGT+TGG - chr7_3:46735121-46735140 None:intergenic 40.0%
TCATGGGTCAAATGTTCATC+TGG + chr7_3:46735238-46735257 Msa1106590:intron 40.0%
CATGGGTCAAATGTTCATCT+GGG + chr7_3:46735239-46735258 Msa1106590:intron 40.0%
!!! TCTTTTTTACCCTTTGGTCC+CGG + chr7_3:46735402-46735421 Msa1106590:intron 40.0%
GTCAGACTTTACTTGACTCT+CGG - chr7_3:46735458-46735477 None:intergenic 40.0%
GGTTTATGCACAGATAACTC+TGG + chr7_3:46735639-46735658 Msa1106590:CDS 40.0%
GTTAGTTAAGACCTTGCTGA+AGG - chr7_3:46735838-46735857 None:intergenic 40.0%
!! GATGGTGTTATTACCAGTGA+GGG - chr7_3:46735921-46735940 None:intergenic 40.0%
!! AGATGGTGTTATTACCAGTG+AGG - chr7_3:46735922-46735941 None:intergenic 40.0%
! CATGTGTTGATCCAAGTAGA+AGG + chr7_3:46736136-46736155 Msa1106590:intron 40.0%
AAATCTGAGTCCCTTCTACT+TGG - chr7_3:46736150-46736169 None:intergenic 40.0%
ACTGAGGACCACATATACTT+GGG - chr7_3:46736173-46736192 None:intergenic 40.0%
AACTGAGGACCACATATACT+TGG - chr7_3:46736174-46736193 None:intergenic 40.0%
AAACATTAGGCCACTAGTAG+TGG - chr7_3:46736324-46736343 None:intergenic 40.0%
!! CAACACCGACTTATCTAATG+TGG - chr7_3:46736376-46736395 None:intergenic 40.0%
! GAGATACGTTTGTGTTTCTG+AGG + chr7_3:46736516-46736535 Msa1106590:intron 40.0%
! AATAATGGAGAACTACGCGT+TGG + chr7_3:46736674-46736693 Msa1106590:CDS 40.0%
ATGCCTTCATCTGTGATTTC+TGG + chr7_3:46736728-46736747 Msa1106590:CDS 40.0%
TGACCAGAAATCACAGATGA+AGG - chr7_3:46736734-46736753 None:intergenic 40.0%
TTGTAGTATACTACAAGCCC+AGG + chr7_3:46736813-46736832 Msa1106590:CDS 40.0%
TAACTAGAAACCGTCTTTCG+TGG + chr7_3:46736854-46736873 Msa1106590:intron 40.0%
ATTCTCCTGAGACTGACAAA+AGG + chr7_3:46737013-46737032 Msa1106590:CDS 40.0%
GTTGTTTATCCAAACGGTCT+TGG - chr7_3:46737089-46737108 None:intergenic 40.0%
TGGCACAATAATTGGACAAG+AGG + chr7_3:46737241-46737260 Msa1106590:intron 40.0%
TCCACTCTTCTCATATTCTC+AGG + chr7_3:46737384-46737403 Msa1106590:intron 40.0%
ACCTGAGAATATGAGAAGAG+TGG - chr7_3:46737388-46737407 None:intergenic 40.0%
GGTGAAATTCTATCAGGTCT+TGG - chr7_3:46737436-46737455 None:intergenic 40.0%
GACCTGATAGAATTTCACCA+TGG + chr7_3:46737437-46737456 Msa1106590:CDS 40.0%
TCCCATGGTGAAATTCTATC+AGG - chr7_3:46737442-46737461 None:intergenic 40.0%
! CCAAAATCTGGAACTTCACT+AGG - chr7_3:46737538-46737557 None:intergenic 40.0%
! CCTAGTGAAGTTCCAGATTT+TGG + chr7_3:46737535-46737554 Msa1106590:CDS 40.0%
!! TCCAGATTTTGGTAAGGAAG+CGG + chr7_3:46737546-46737565 Msa1106590:CDS 40.0%
AGTAGGTGACTCTACTTACT+GGG + chr7_3:46737681-46737700 Msa1106590:CDS 40.0%
ACTGATAATAGCAGCTGCAA+TGG + chr7_3:46737799-46737818 Msa1106590:CDS 40.0%
ATATCGAGGAATCCAACTGA+CGG + chr7_3:46737823-46737842 Msa1106590:CDS 40.0%
CTATCTTCTCCTCATTCAAG+TGG + chr7_3:46737853-46737872 Msa1106590:CDS 40.0%
TGTCAAGGAGAACAAAACTG+AGG + chr7_3:46737996-46738015 Msa1106590:CDS 40.0%
GCTACAAGCTGTAGATTGTT+CGG + chr7_3:46738021-46738040 Msa1106590:CDS 40.0%
CTACAAGCTGTAGATTGTTC+GGG + chr7_3:46738022-46738041 Msa1106590:CDS 40.0%
GAGTATGCGGCAAATGTATT+TGG + chr7_3:46738087-46738106 Msa1106590:CDS 40.0%
TCTGCATCAGTTCTTGACAT+GGG - chr7_3:46738141-46738160 None:intergenic 40.0%
CTTAGTGCAACTTCTGCTAT+TGG - chr7_3:46738253-46738272 None:intergenic 40.0%
CAATAGCAGAAGTTGCACTA+AGG + chr7_3:46738251-46738270 Msa1106590:CDS 40.0%
! CTGCATTTGAACCTTTTGAC+AGG - chr7_3:46738444-46738463 None:intergenic 40.0%
CTGTCAAAAGGTTCAAATGC+AGG + chr7_3:46738442-46738461 Msa1106590:intron 40.0%
TTGATCATAACCATCCAACG+CGG - chr7_3:46738498-46738517 None:intergenic 40.0%
GAGAAGCTGTTTGACATGAA+GGG + chr7_3:46738533-46738552 Msa1106590:CDS 40.0%
! TGTCTTCACTGATGATGAAG+GGG + chr7_3:46738586-46738605 Msa1106590:intron 40.0%
! AGCTCATTTTGTGCACATCT+TGG - chr7_3:46738897-46738916 None:intergenic 40.0%
ATGTGCACAAAATGAGCTCA+GGG + chr7_3:46738899-46738918 Msa1106590:CDS 40.0%
!! CAAACTTTGGAGTCTCTAGA+TGG - chr7_3:46739120-46739139 None:intergenic 40.0%
TGTAAGGAAACGGCGTTTGT+TGG - chr7_3:46734468-46734487 None:intergenic 45.0%
CTCTCTCTCTCTCTCTTGTA+AGG - chr7_3:46734484-46734503 None:intergenic 45.0%
CAGTTATGGAAAGCTTGTGC+TGG + chr7_3:46734790-46734809 Msa1106590:CDS 45.0%
AAAACTCTTTGTCCAGCACG+AGG - chr7_3:46734832-46734851 None:intergenic 45.0%
CACGACAAAGGATCTTGTTG+GGG - chr7_3:46735119-46735138 None:intergenic 45.0%
!!! CTTTTTTACCCTTTGGTCCC+GGG + chr7_3:46735403-46735422 Msa1106590:intron 45.0%
!!! TTTTTTACCCTTTGGTCCCG+GGG + chr7_3:46735404-46735423 Msa1106590:intron 45.0%
TCGAACACTTGTGATCGCTT+TGG + chr7_3:46735523-46735542 Msa1106590:intron 45.0%
GGCTGAACAAGAAACAGATG+AGG + chr7_3:46735618-46735637 Msa1106590:intron 45.0%
AAGGAGTGAGTTCTTGGTCT+TGG - chr7_3:46735819-46735838 None:intergenic 45.0%
TTGCTGAAGGAGTGAGTTCT+TGG - chr7_3:46735825-46735844 None:intergenic 45.0%
AAGAACTCACTCCTTCAGCA+AGG + chr7_3:46735824-46735843 Msa1106590:CDS 45.0%
TCTGATACAAGTACTCACGG+TGG + chr7_3:46735858-46735877 Msa1106590:CDS 45.0%
! ACGGTGGCTTTTCTGTTCTT+CGG + chr7_3:46735874-46735893 Msa1106590:CDS 45.0%
! CTCCTGAGTTGGAGTAGATT+GGG - chr7_3:46736036-46736055 None:intergenic 45.0%
CGTGGTTGACCTGAATAGAA+AGG - chr7_3:46736437-46736456 None:intergenic 45.0%
! TGGTACCTTTTGTCAGTCTC+AGG - chr7_3:46737021-46737040 None:intergenic 45.0%
TGTAGGAACAGAAGCCAGAA+GGG - chr7_3:46737473-46737492 None:intergenic 45.0%
ATGTAGGAACAGAAGCCAGA+AGG - chr7_3:46737474-46737493 None:intergenic 45.0%
! GCAGCAGGTTGAATAGATGT+AGG - chr7_3:46737490-46737509 None:intergenic 45.0%
TCCGCTTCCTTACCAAAATC+TGG - chr7_3:46737550-46737569 None:intergenic 45.0%
! TCAAATCGATTCCGGCTAGT+AGG + chr7_3:46737599-46737618 Msa1106590:CDS 45.0%
! CAAATCGATTCCGGCTAGTA+GGG + chr7_3:46737600-46737619 Msa1106590:CDS 45.0%
TTCAAAGGAGACACGACAGT+AGG + chr7_3:46737664-46737683 Msa1106590:CDS 45.0%
CAGTAGGTGACTCTACTTAC+TGG + chr7_3:46737680-46737699 Msa1106590:CDS 45.0%
ACTCTACTTACTGGGAAGCT+GGG + chr7_3:46737689-46737708 Msa1106590:CDS 45.0%
TGAGAAGGACCACTTGAATG+AGG - chr7_3:46737865-46737884 None:intergenic 45.0%
TGGTCCTTCTCATTTGTGTC+AGG + chr7_3:46737873-46737892 Msa1106590:CDS 45.0%
!! TAGCAAGAGTGTTGCAGTCT+CGG + chr7_3:46737909-46737928 Msa1106590:CDS 45.0%
GTTGACTGACCATGTTGTCA+AGG + chr7_3:46737981-46738000 Msa1106590:CDS 45.0%
!! TCAGAAGGTGTCTGAGTATG+CGG + chr7_3:46738074-46738093 Msa1106590:CDS 45.0%
! TGTATTTGGAGTCACCTCTG+AGG + chr7_3:46738101-46738120 Msa1106590:CDS 45.0%
! GTATTTGGAGTCACCTCTGA+GGG + chr7_3:46738102-46738121 Msa1106590:CDS 45.0%
ATCAGTTCTTGACATGGGAG+CGG - chr7_3:46738136-46738155 None:intergenic 45.0%
GTCTGCATCAGTTCTTGACA+TGG - chr7_3:46738142-46738161 None:intergenic 45.0%
GGAGAAGCTGTTTGACATGA+AGG + chr7_3:46738532-46738551 Msa1106590:CDS 45.0%
GAAGGGGATATGATGCTTGT+TGG + chr7_3:46738602-46738621 Msa1106590:intron 45.0%
!! TGCTTGTTGGTGATGATCCA+TGG + chr7_3:46738615-46738634 Msa1106590:intron 45.0%
TAAAGAGATACTCACGGCCA+TGG - chr7_3:46738635-46738654 None:intergenic 45.0%
!! GTGGTATTGACTTGAGACCT+GGG + chr7_3:46738684-46738703 Msa1106590:intron 45.0%
! TGCGATTAGTCCACTCAAAC+TGG - chr7_3:46738752-46738771 None:intergenic 45.0%
! CATTTTGTGCACATCTTGGC+TGG - chr7_3:46738893-46738912 None:intergenic 45.0%
GATGTGCACAAAATGAGCTC+AGG + chr7_3:46738898-46738917 Msa1106590:CDS 45.0%
GCACGAGGAACTTCAACATG+AGG - chr7_3:46734817-46734836 None:intergenic 50.0%
CATGTTGAAGTTCCTCGTGC+TGG + chr7_3:46734817-46734836 Msa1106590:CDS 50.0%
! TTTTTACCCTTTGGTCCCGG+GGG + chr7_3:46735405-46735424 Msa1106590:intron 50.0%
GGACAAGGATCAAGGCTTGT+AGG - chr7_3:46735786-46735805 None:intergenic 50.0%
GTTCAGCAGGACAAGGATCA+AGG - chr7_3:46735794-46735813 None:intergenic 50.0%
!! GAGTGAGTTCTTGGTCTTGG+AGG - chr7_3:46735816-46735835 None:intergenic 50.0%
CAGTGAGGGAAGACATTCAG+TGG - chr7_3:46735907-46735926 None:intergenic 50.0%
CACTGAATGTCTTCCCTCAC+TGG + chr7_3:46735905-46735924 Msa1106590:CDS 50.0%
GTCCCAATCTACTCCAACTC+AGG + chr7_3:46736031-46736050 Msa1106590:CDS 50.0%
! GCTCCTGAGTTGGAGTAGAT+TGG - chr7_3:46736037-46736056 None:intergenic 50.0%
ATCTACTCCAACTCAGGAGC+TGG + chr7_3:46736037-46736056 Msa1106590:CDS 50.0%
TTAGCAACCAGCTCCTGAGT+TGG - chr7_3:46736047-46736066 None:intergenic 50.0%
AACTCAGGAGCTGGTTGCTA+AGG + chr7_3:46736046-46736065 Msa1106590:CDS 50.0%
GACACTTGCTCACAACTGGA+TGG + chr7_3:46736459-46736478 Msa1106590:intron 50.0%
! GATGAAGGCATGCAGCTTTG+TGG - chr7_3:46736719-46736738 None:intergenic 50.0%
ATGCAGTTGCAAGGACTCCA+AGG - chr7_3:46736766-46736785 None:intergenic 50.0%
CAGCATGAGATGCAGTTGCA+AGG - chr7_3:46736775-46736794 None:intergenic 50.0%
AGAAGGGGTTCTATCTCCCA+TGG - chr7_3:46737457-46737476 None:intergenic 50.0%
ATGGGAGATAGAACCCCTTC+TGG + chr7_3:46737456-46737475 Msa1106590:CDS 50.0%
GTAGGAACAGAAGCCAGAAG+GGG - chr7_3:46737472-46737491 None:intergenic 50.0%
GGAACTTCACTAGGTAGCCT+AGG - chr7_3:46737529-46737548 None:intergenic 50.0%
CCAAGTCTAACCCTACTAGC+CGG - chr7_3:46737613-46737632 None:intergenic 50.0%
GCTAGTAGGGTTAGACTTGG+TGG + chr7_3:46737613-46737632 Msa1106590:CDS 50.0%
GACTCTACTTACTGGGAAGC+TGG + chr7_3:46737688-46737707 Msa1106590:CDS 50.0%
GGAGTGACGGTATGCATTTG+TGG + chr7_3:46737764-46737783 Msa1106590:CDS 50.0%
GCAGCTGCAATGGTATATCG+AGG + chr7_3:46737809-46737828 Msa1106590:CDS 50.0%
GGAATCCAACTGACGGAAGT+TGG + chr7_3:46737830-46737849 Msa1106590:CDS 50.0%
GATAGCCAACTTCCGTCAGT+TGG - chr7_3:46737838-46737857 None:intergenic 50.0%
GCGTCCTGACACAAATGAGA+AGG - chr7_3:46737880-46737899 None:intergenic 50.0%
!! TCAAATGCAGGGTGTTGCAG+TGG + chr7_3:46738454-46738473 Msa1106590:CDS 50.0%
!! CAAATGCAGGGTGTTGCAGT+GGG + chr7_3:46738455-46738474 Msa1106590:CDS 50.0%
TGAAGGGACAGATCCATCCT+AGG + chr7_3:46738549-46738568 Msa1106590:CDS 50.0%
!! TTAACCCACTTGGATTGGCC+TGG + chr7_3:46738662-46738681 Msa1106590:intron 50.0%
GGTCTCAAGTCAATACCACC+AGG - chr7_3:46738683-46738702 None:intergenic 50.0%
!! GGTGGTATTGACTTGAGACC+TGG + chr7_3:46738683-46738702 Msa1106590:intron 50.0%
GAATCGAACCTGAGACCTTG+AGG - chr7_3:46738721-46738740 None:intergenic 50.0%
TAGTCCACTCAAACTGGCAC+CGG - chr7_3:46738746-46738765 None:intergenic 50.0%
ATTATCAGGACCCCTTCCCC+CGG - chr7_3:46735424-46735443 None:intergenic 55.0%
CTTGGAGGTTCAGCAGGACA+AGG - chr7_3:46735801-46735820 None:intergenic 55.0%
!! CTTGGTCTTGGAGGTTCAGC+AGG - chr7_3:46735807-46735826 None:intergenic 55.0%
!! GTTGTGAGCAAGTGTCGACG+TGG - chr7_3:46736455-46736474 None:intergenic 55.0%
CGTCGACACTTGCTCACAAC+TGG + chr7_3:46736455-46736474 Msa1106590:intron 55.0%
! GAGAACTACGCGTTGGTGTG+AGG + chr7_3:46736681-46736700 Msa1106590:CDS 55.0%
TCTGGTCAGAGCATGCACCT+TGG + chr7_3:46736746-46736765 Msa1106590:CDS 55.0%
CCGGCTAGTAGGGTTAGACT+TGG + chr7_3:46737610-46737629 Msa1106590:CDS 55.0%
!! AGAGTGTTGCAGTCTCGGCT+TGG + chr7_3:46737914-46737933 Msa1106590:CDS 55.0%
TCCTCGCACGAACACTCAGA+AGG + chr7_3:46738059-46738078 Msa1106590:CDS 55.0%
ACCTTCTGAGTGTTCGTGCG+AGG - chr7_3:46738063-46738082 None:intergenic 55.0%
ACCACCAGGCCAATCCAAGT+GGG - chr7_3:46738669-46738688 None:intergenic 55.0%
TACCACCAGGCCAATCCAAG+TGG - chr7_3:46738670-46738689 None:intergenic 55.0%
TCGAACCTGAGACCTTGAGG+AGG - chr7_3:46738718-46738737 None:intergenic 55.0%
GGTCTCAGGTTCGATTCTCC+CGG + chr7_3:46738724-46738743 Msa1106590:intron 55.0%
AGTCCACTCAAACTGGCACC+GGG - chr7_3:46738745-46738764 None:intergenic 55.0%
TTATCAGGACCCCTTCCCCC+GGG - chr7_3:46735423-46735442 None:intergenic 60.0%
!! CGGTGTTGTAGGGTCGAGTC+AGG + chr7_3:46736388-46736407 Msa1106590:intron 60.0%
GTGGACTTGACCGCGTTGGA+TGG + chr7_3:46738485-46738504 Msa1106590:CDS 60.0%
!! ACCCACTTGGATTGGCCTGG+TGG + chr7_3:46738665-46738684 Msa1106590:intron 60.0%
! TTGAGGAGGAGCACACTCCC+AGG - chr7_3:46738704-46738723 None:intergenic 60.0%
! TGGGAGTGTGCTCCTCCTCA+AGG + chr7_3:46738703-46738722 Msa1106590:intron 60.0%
GTGCTCCTCCTCAAGGTCTC+AGG + chr7_3:46738710-46738729 Msa1106590:intron 60.0%
! TCTCCCGGTGCCAGTTTGAG+TGG + chr7_3:46738739-46738758 Msa1106590:intron 60.0%
TACCCTTTGGTCCCGGGGGA+AGG + chr7_3:46735409-46735428 Msa1106590:intron 65.0%
ACCCTTTGGTCCCGGGGGAA+GGG + chr7_3:46735410-46735429 Msa1106590:intron 65.0%
AGCGGCAACGCATCCCTCAG+AGG - chr7_3:46738118-46738137 None:intergenic 65.0%
! GGGTGTTGCAGTGGGTCGTG+CGG + chr7_3:46738463-46738482 Msa1106590:CDS 65.0%
TGTTGCAGTGGGTCGTGCGG+TGG + chr7_3:46738466-46738485 Msa1106590:CDS 65.0%
! TGCGGTGGACTTGACCGCGT+TGG + chr7_3:46738481-46738500 Msa1106590:CDS 65.0%
CCCCTTCCCCCGGGACCAAA+GGG - chr7_3:46735414-46735433 None:intergenic 70.0%
CCCTTTGGTCCCGGGGGAAG+GGG + chr7_3:46735411-46735430 Msa1106590:intron 70.0%
ACCCCTTCCCCCGGGACCAA+AGG - chr7_3:46735415-46735434 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 46734381 46739276 46734381 ID=Msa1106590;Name=Msa1106590
chr7_3 mRNA 46734381 46739276 46734381 ID=Msa1106590-mRNA-1;Parent=Msa1106590;Name=Msa1106590-mRNA-1;_AED=0.09;_eAED=0.11;_QI=370|0.6|0.63|1|1|1|11|299|672
chr7_3 exon 46734381 46734879 46734381 ID=Msa1106590-mRNA-1:exon:9572;Parent=Msa1106590-mRNA-1
chr7_3 exon 46735063 46735158 46735063 ID=Msa1106590-mRNA-1:exon:9573;Parent=Msa1106590-mRNA-1
chr7_3 exon 46735619 46735675 46735619 ID=Msa1106590-mRNA-1:exon:9574;Parent=Msa1106590-mRNA-1
chr7_3 exon 46735774 46735926 46735774 ID=Msa1106590-mRNA-1:exon:9575;Parent=Msa1106590-mRNA-1
chr7_3 exon 46736026 46736110 46736026 ID=Msa1106590-mRNA-1:exon:9576;Parent=Msa1106590-mRNA-1
chr7_3 exon 46736657 46736834 46736657 ID=Msa1106590-mRNA-1:exon:9577;Parent=Msa1106590-mRNA-1
chr7_3 exon 46736915 46737034 46736915 ID=Msa1106590-mRNA-1:exon:9578;Parent=Msa1106590-mRNA-1
chr7_3 exon 46737261 46737333 46737261 ID=Msa1106590-mRNA-1:exon:9579;Parent=Msa1106590-mRNA-1
chr7_3 exon 46737406 46738272 46737406 ID=Msa1106590-mRNA-1:exon:9580;Parent=Msa1106590-mRNA-1
chr7_3 exon 46738452 46738586 46738452 ID=Msa1106590-mRNA-1:exon:9581;Parent=Msa1106590-mRNA-1
chr7_3 exon 46738852 46739276 46738852 ID=Msa1106590-mRNA-1:exon:9582;Parent=Msa1106590-mRNA-1
chr7_3 five_prime_UTR 46734381 46734750 46734381 ID=Msa1106590-mRNA-1:five_prime_utr;Parent=Msa1106590-mRNA-1
chr7_3 CDS 46734751 46734879 46734751 ID=Msa1106590-mRNA-1:cds;Parent=Msa1106590-mRNA-1
chr7_3 CDS 46735063 46735158 46735063 ID=Msa1106590-mRNA-1:cds;Parent=Msa1106590-mRNA-1
chr7_3 CDS 46735619 46735675 46735619 ID=Msa1106590-mRNA-1:cds;Parent=Msa1106590-mRNA-1
chr7_3 CDS 46735774 46735926 46735774 ID=Msa1106590-mRNA-1:cds;Parent=Msa1106590-mRNA-1
chr7_3 CDS 46736026 46736110 46736026 ID=Msa1106590-mRNA-1:cds;Parent=Msa1106590-mRNA-1
chr7_3 CDS 46736657 46736834 46736657 ID=Msa1106590-mRNA-1:cds;Parent=Msa1106590-mRNA-1
chr7_3 CDS 46736915 46737034 46736915 ID=Msa1106590-mRNA-1:cds;Parent=Msa1106590-mRNA-1
chr7_3 CDS 46737261 46737333 46737261 ID=Msa1106590-mRNA-1:cds;Parent=Msa1106590-mRNA-1
chr7_3 CDS 46737406 46738272 46737406 ID=Msa1106590-mRNA-1:cds;Parent=Msa1106590-mRNA-1
chr7_3 CDS 46738452 46738586 46738452 ID=Msa1106590-mRNA-1:cds;Parent=Msa1106590-mRNA-1
chr7_3 CDS 46738852 46738977 46738852 ID=Msa1106590-mRNA-1:cds;Parent=Msa1106590-mRNA-1
chr7_3 three_prime_UTR 46738978 46739276 46738978 ID=Msa1106590-mRNA-1:three_prime_utr;Parent=Msa1106590-mRNA-1
Gene Sequence

>Msa1106590

ATGATGATGAATAATGGTGAAGAAGATGAACTCTATGAACAGTTATGGAAAGCTTGTGCTGGTCCTCATGTTGAAGTTCCTCGTGCTGGACAAAGAGTTTTCTATTTTCCTCAAGGACATATGGAACAATTAGAAGTATCAACAAATCAGGAACTAAATCAGAGGATTCCATTGTTCAAACTCCCCAACAAGATCCTTTGTCGTGTTGTAAATGTTCATTTACTGGCTGAACAAGAAACAGATGAGGTTTATGCACAGATAACTCTGGTACCAGAATCTAATCAAACTGAGCCTACAAGCCTTGATCCTTGTCCTGCTGAACCTCCAAGACCAAGAACTCACTCCTTCAGCAAGGTCTTAACTAACTCTGATACAAGTACTCACGGTGGCTTTTCTGTTCTTCGGAAGCATGCCACTGAATGTCTTCCCTCACTGGATATGTCCCAATCTACTCCAACTCAGGAGCTGGTTGCTAAGGATCTTCACAATTATGAATGGCACTTTAAGCATATATTTCGAGATGCTGTTTATAGAGGGAATAATGGAGAACTACGCGTTGGTGTGAGGCATCTTGCTTCTCCACAAAGCTGCATGCCTTCATCTGTGATTTCTGGTCAGAGCATGCACCTTGGAGTCCTTGCAACTGCATCTCATGCTGTTGCAACTCAAACTCTTTTTGTAGTATACTACAAGCCCAGGATGAGCCAGTTCATTATAAGTGTTAATAAGTATATGGAAGCTATCAACCAAAAATTTAGTGTTGGCATGAGGTTTAAGATGAGTTTTGATGGGGAAGATTCTCCTGAGACTGACAAAAGAGGATATTTCTTCACACTGGTTGAATTCAAAATGGAGATCACTCAAGGTATATTCTCACCTTTGATATTTTCAGTTCAATGGGATGACACTGCATCGATTCCAAGACCTGATAGAATTTCACCATGGGAGATAGAACCCCTTCTGGCTTCTGTTCCTACATCTATTCAACCTGCTGCTGCAAAATATAAAAGGCCTAGGCTACCTAGTGAAGTTCCAGATTTTGGTAAGGAAGCGGAATATTTTATATCCTATAATCGTTTTCATTTCAAATCGATTCCGGCTAGTAGGGTTAGACTTGGTGGTTGTTTTGCTGACGTTTTCATTTCACTTTTCAAAGGAGACACGACAGTAGGTGACTCTACTTACTGGGAAGCTGGGCTGACACAATCAGATGTAACACAAGTTAATAATGTTATGTCTGAAAACATAAGGAGTGACGGTATGCATTTGTGGCATCATAAGCAAACTGATAATAGCAGCTGCAATGGTATATCGAGGAATCCAACTGACGGAAGTTGGCTATCTTCTCCTCATTCAAGTGGTCCTTCTCATTTGTGTCAGGACGCGAGTGACGATAGCAAGAGTGTTGCAGTCTCGGCTTGGCCTATTTCAAAAACTCACTCAGAAATATTGAACAACAATGATCAGTTGACTGACCATGTTGTCAAGGAGAACAAAACTGAGGCTGCTACAAGCTGTAGATTGTTCGGGATTGATCTTAATGATCCTCGCACGAACACTCAGAAGGTGTCTGAGTATGCGGCAAATGTATTTGGAGTCACCTCTGAGGGATGCGTTGCCGCTCCCATGTCAAGAACTGATGCAGACCAAAATAAGTTTGATATCTCAAAGGCTTCAAAAGAAAGGAAACAAGAACAGCTACCGATATCTCCAAATGAAACACAAAGCAAGCAAACCAATAGCAGAAGTTGCACTAAGGTTCAAATGCAGGGTGTTGCAGTGGGTCGTGCGGTGGACTTGACCGCGTTGGATGGTTATGATCAACTTATTGATGAATTGGAGAAGCTGTTTGACATGAAGGGACAGATCCATCCTAGGAATAAATGGGAAATTGGAATTCTGCAATATGGTGAGAAGAATCTTCATTTGTTCCAGCCAAGATGTGCACAAAATGAGCTCAGGGACCAAATTACCTATCTCATCACTAGAAGAAACTGTAATAAGCTCAGACACAGCTGA
Protein sequence

>Msa1106590

MMMNNGEEDELYEQLWKACAGPHVEVPRAGQRVFYFPQGHMEQLEVSTNQELNQRIPLFKLPNKILCRVVNVHLLAEQETDEVYAQITLVPESNQTEPTSLDPCPAEPPRPRTHSFSKVLTNSDTSTHGGFSVLRKHATECLPSLDMSQSTPTQELVAKDLHNYEWHFKHIFRDAVYRGNNGELRVGVRHLASPQSCMPSSVISGQSMHLGVLATASHAVATQTLFVVYYKPRMSQFIISVNKYMEAINQKFSVGMRFKMSFDGEDSPETDKRGYFFTLVEFKMEITQGIFSPLIFSVQWDDTASIPRPDRISPWEIEPLLASVPTSIQPAAAKYKRPRLPSEVPDFGKEAEYFISYNRFHFKSIPASRVRLGGCFADVFISLFKGDTTVGDSTYWEAGLTQSDVTQVNNVMSENIRSDGMHLWHHKQTDNSSCNGISRNPTDGSWLSSPHSSGPSHLCQDASDDSKSVAVSAWPISKTHSEILNNNDQLTDHVVKENKTEAATSCRLFGIDLNDPRTNTQKVSEYAANVFGVTSEGCVAAPMSRTDADQNKFDISKASKERKQEQLPISPNETQSKQTNSRSCTKVQMQGVAVGRAVDLTALDGYDQLIDELEKLFDMKGQIHPRNKWEIGILQYGEKNLHLFQPRCAQNELRDQITYLITRRNCNKLRHS*