Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0244890 | XP_003595077.1 | 94.262 | 244 | 14 | 0 | 1 | 244 | 1 | 244 | 5.51e-169 | 476 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0244890 | sp|Q2HIV9|BH035_ARATH | 62.449 | 245 | 83 | 6 | 1 | 241 | 1 | 240 | 2.03e-94 | 280 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0244890 | G7IG90 | 94.262 | 244 | 14 | 0 | 1 | 244 | 1 | 244 | 2.63e-169 | 476 |
Gene ID | Type | Classification |
---|---|---|
Msa0244890 | TF | bHLH |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0017930 | Msa0244890 | 0.812415 | 4.289614e-51 | -8.615850e-47 |
Msa0030160 | Msa0244890 | 0.805861 | 1.088112e-49 | -8.615850e-47 |
Msa0043740 | Msa0244890 | 0.820060 | 8.373031e-53 | -8.615850e-47 |
Msa0051050 | Msa0244890 | 0.844129 | 9.150074e-59 | -8.615850e-47 |
Msa0090090 | Msa0244890 | 0.828431 | 9.025395e-55 | -8.615850e-47 |
Msa0101240 | Msa0244890 | 0.838400 | 2.940723e-57 | -8.615850e-47 |
Msa0137560 | Msa0244890 | 0.815916 | 7.234629e-52 | -8.615850e-47 |
Msa0151990 | Msa0244890 | 0.828446 | 8.952274e-55 | -8.615850e-47 |
Msa0182560 | Msa0244890 | 0.801806 | 7.568219e-49 | -8.615850e-47 |
Msa0184410 | Msa0244890 | 0.813454 | 2.539515e-51 | -8.615850e-47 |
Msa0189600 | Msa0244890 | 0.823916 | 1.070697e-53 | -8.615850e-47 |
Msa0204830 | Msa0244890 | 0.886573 | 3.040898e-72 | -8.615850e-47 |
Msa0211200 | Msa0244890 | 0.822763 | 1.990255e-53 | -8.615850e-47 |
Msa0244890 | Msa0244900 | 0.895059 | 1.373298e-75 | -8.615850e-47 |
Msa0244890 | Msa0254260 | 0.831361 | 1.743891e-55 | -8.615850e-47 |
Msa0244890 | Msa0263230 | 0.810341 | 1.209681e-50 | -8.615850e-47 |
Msa0244890 | Msa0271540 | 0.844023 | 9.769188e-59 | -8.615850e-47 |
Msa0244890 | Msa0283480 | 0.859535 | 3.866463e-63 | -8.615850e-47 |
Msa0244890 | Msa0283490 | 0.956645 | 1.809622e-114 | -8.615850e-47 |
Msa0244890 | Msa0283500 | 0.804621 | 1.978695e-49 | -8.615850e-47 |
Msa0244890 | Msa0283600 | 0.804118 | 2.518527e-49 | -8.615850e-47 |
Msa0244890 | Msa0290680 | 0.828347 | 9.457422e-55 | -8.615850e-47 |
Msa0244890 | Msa0300840 | 0.826251 | 3.006363e-54 | -8.615850e-47 |
Msa0244890 | Msa0313900 | 0.802007 | 6.882331e-49 | -8.615850e-47 |
Msa0244890 | Msa0319260 | 0.822011 | 2.976082e-53 | -8.615850e-47 |
Msa0244890 | Msa0319270 | 0.827104 | 1.881343e-54 | -8.615850e-47 |
Msa0244890 | Msa0328730 | 0.813206 | 2.878527e-51 | -8.615850e-47 |
Msa0244890 | Msa0331970 | 0.905229 | 5.349724e-80 | -8.615850e-47 |
Msa0244890 | Msa0332390 | 0.806748 | 7.074705e-50 | -8.615850e-47 |
Msa0244890 | Msa0334630 | 0.802697 | 4.961646e-49 | -8.615850e-47 |
Msa0244890 | Msa0338340 | 0.833937 | 4.002961e-56 | -8.615850e-47 |
Msa0244890 | Msa0408340 | 0.833440 | 5.326106e-56 | -8.615850e-47 |
Msa0244890 | Msa0427700 | 0.812379 | 4.367899e-51 | -8.615850e-47 |
Msa0244890 | Msa0501410 | 0.807592 | 4.689309e-50 | -8.615850e-47 |
Msa0244890 | Msa0567380 | 0.840110 | 1.059051e-57 | -8.615850e-47 |
Msa0244890 | Msa0568800 | 0.843918 | 1.042487e-58 | -8.615850e-47 |
Msa0244890 | Msa0599140 | 0.819925 | 8.988150e-53 | -8.615850e-47 |
Msa0244890 | Msa0614380 | 0.862265 | 5.727167e-64 | -8.615850e-47 |
Msa0244890 | Msa0674480 | 0.810226 | 1.280709e-50 | -8.615850e-47 |
Msa0244890 | Msa0697590 | 0.834182 | 3.474277e-56 | -8.615850e-47 |
Msa0244890 | Msa0718800 | 0.816870 | 4.425700e-52 | -8.615850e-47 |
Msa0244890 | Msa0723090 | 0.802139 | 6.465586e-49 | -8.615850e-47 |
Msa0244890 | Msa0734250 | 0.818166 | 2.259226e-52 | -8.615850e-47 |
Msa0244890 | Msa0758850 | 0.807496 | 4.912451e-50 | -8.615850e-47 |
Msa0244890 | Msa0786980 | 0.801405 | 9.145356e-49 | -8.615850e-47 |
Msa0244890 | Msa0827820 | 0.812231 | 4.703685e-51 | -8.615850e-47 |
Msa0244890 | Msa0862620 | 0.803597 | 3.231636e-49 | -8.615850e-47 |
Msa0244890 | Msa0956840 | 0.810156 | 1.325964e-50 | -8.615850e-47 |
Msa0244890 | Msa0999680 | 0.802155 | 6.414630e-49 | -8.615850e-47 |
Msa0244890 | Msa1029870 | 0.813346 | 2.681610e-51 | -8.615850e-47 |
Msa0244890 | Msa1043120 | 0.829576 | 4.764621e-55 | -8.615850e-47 |
Msa0244890 | Msa1074890 | 0.838572 | 2.655557e-57 | -8.615850e-47 |
Msa0244890 | Msa1084640 | 0.830967 | 2.179660e-55 | -8.615850e-47 |
Msa0244890 | Msa1115740 | 0.822730 | 2.025940e-53 | -8.615850e-47 |
Msa0244890 | Msa1162240 | 0.821006 | 5.079297e-53 | -8.615850e-47 |
Msa0244890 | Msa1184890 | 0.811737 | 6.026349e-51 | -8.615850e-47 |
Msa0244890 | Msa1189820 | 0.825851 | 3.740696e-54 | -8.615850e-47 |
Msa0244890 | Msa1250420 | 0.823118 | 1.645557e-53 | -8.615850e-47 |
Msa0244890 | Msa1266490 | 0.815623 | 8.406718e-52 | -8.615850e-47 |
Msa0244890 | Msa1284990 | 0.802531 | 5.367746e-49 | -8.615850e-47 |
Msa0244890 | Msa1334490 | 0.807567 | 4.746004e-50 | -8.615850e-47 |
Msa0244890 | Msa1341840 | 0.806708 | 7.214771e-50 | -8.615850e-47 |
Msa0244890 | Msa1353890 | 0.800299 | 1.538592e-48 | -8.615850e-47 |
Msa0244890 | Msa1356600 | -0.804533 | 2.064296e-49 | -8.615850e-47 |
Msa0244890 | Msa1360420 | 0.840912 | 6.531627e-58 | -8.615850e-47 |
Msa0244890 | Msa1400340 | 0.831475 | 1.634214e-55 | -8.615850e-47 |
Msa0244890 | Msa1407750 | 0.809758 | 1.615114e-50 | -8.615850e-47 |
Msa0244890 | Msa1409490 | 0.826400 | 2.769732e-54 | -8.615850e-47 |
Msa0244890 | Msa1416730 | 0.825490 | 4.556933e-54 | -8.615850e-47 |
Msa0244890 | Msa1439650 | 0.968002 | 4.627099e-128 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0244890 | MtrunA17_Chr2g0298751 | 94.262 | 244 | 14 | 0 | 1 | 244 | 1 | 244 | 5.07e-173 | 476 |
Msa0244890 | MtrunA17_Chr8g0365711 | 32.353 | 170 | 107 | 2 | 51 | 220 | 243 | 404 | 1.13e-23 | 98.6 |
Msa0244890 | MtrunA17_Chr1g0211081 | 32.911 | 237 | 128 | 7 | 6 | 213 | 258 | 492 | 3.77e-22 | 94.7 |
Msa0244890 | MtrunA17_Chr2g0320291 | 28.796 | 191 | 113 | 5 | 51 | 236 | 132 | 304 | 5.14e-19 | 84.3 |
Msa0244890 | MtrunA17_Chr7g0252041 | 32.632 | 190 | 115 | 6 | 49 | 232 | 283 | 465 | 8.94e-18 | 82.0 |
Msa0244890 | MtrunA17_Chr3g0131691 | 30.481 | 187 | 122 | 5 | 48 | 232 | 294 | 474 | 1.12e-17 | 81.6 |
Msa0244890 | MtrunA17_Chr4g0028071 | 31.098 | 164 | 96 | 3 | 51 | 211 | 148 | 297 | 7.14e-17 | 78.6 |
Msa0244890 | MtrunA17_Chr7g0260841 | 30.286 | 175 | 85 | 4 | 53 | 227 | 356 | 493 | 1.39e-14 | 72.8 |
Msa0244890 | MtrunA17_Chr7g0275821 | 27.219 | 169 | 92 | 4 | 53 | 216 | 253 | 395 | 3.59e-14 | 71.2 |
Msa0244890 | MtrunA17_Chr4g0049331 | 28.049 | 164 | 101 | 4 | 53 | 214 | 136 | 284 | 8.98e-14 | 69.3 |
Msa0244890 | MtrunA17_Chr8g0366751 | 29.487 | 156 | 96 | 3 | 53 | 202 | 463 | 610 | 1.79e-13 | 69.3 |
Msa0244890 | MtrunA17_Chr2g0333611 | 23.944 | 213 | 129 | 5 | 27 | 221 | 3 | 200 | 3.21e-13 | 66.6 |
Msa0244890 | MtrunA17_Chr5g0411341 | 30.719 | 153 | 98 | 4 | 53 | 202 | 494 | 641 | 3.92e-13 | 68.6 |
Msa0244890 | MtrunA17_Chr8g0346161 | 50.820 | 61 | 23 | 1 | 53 | 113 | 292 | 345 | 2.95e-12 | 65.9 |
Msa0244890 | MtrunA17_Chr8g0346151 | 60.000 | 45 | 18 | 0 | 53 | 97 | 280 | 324 | 4.23e-12 | 65.1 |
Msa0244890 | MtrunA17_Chr5g0400661 | 26.257 | 179 | 109 | 6 | 53 | 219 | 150 | 317 | 4.86e-12 | 64.7 |
Msa0244890 | MtrunA17_Chr2g0280161 | 28.221 | 163 | 103 | 2 | 53 | 214 | 178 | 327 | 5.15e-12 | 64.7 |
Msa0244890 | MtrunA17_Chr3g0141091 | 51.282 | 78 | 34 | 2 | 48 | 122 | 169 | 245 | 7.77e-12 | 63.9 |
Msa0244890 | MtrunA17_Chr1g0185621 | 50.909 | 55 | 27 | 0 | 43 | 97 | 466 | 520 | 1.04e-11 | 64.3 |
Msa0244890 | MtrunA17_Chr5g0411541 | 35.032 | 157 | 80 | 4 | 48 | 204 | 152 | 286 | 1.53e-11 | 63.2 |
Msa0244890 | MtrunA17_Chr4g0048851 | 28.743 | 167 | 99 | 3 | 50 | 215 | 45 | 192 | 2.83e-11 | 61.2 |
Msa0244890 | MtrunA17_Chr2g0333641 | 25.758 | 198 | 117 | 6 | 53 | 242 | 138 | 313 | 4.00e-11 | 62.0 |
Msa0244890 | MtrunA17_Chr4g0054571 | 45.000 | 60 | 33 | 0 | 53 | 112 | 151 | 210 | 5.56e-11 | 61.6 |
Msa0244890 | MtrunA17_Chr8g0336681 | 26.012 | 173 | 114 | 4 | 46 | 214 | 150 | 312 | 6.97e-11 | 61.2 |
Msa0244890 | MtrunA17_Chr5g0400621 | 37.838 | 74 | 43 | 1 | 37 | 107 | 139 | 212 | 7.21e-11 | 61.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0244890 | AT5G57150.1 | 63.525 | 244 | 81 | 6 | 1 | 241 | 1 | 239 | 1.56e-96 | 283 |
Msa0244890 | AT4G29930.1 | 55.200 | 250 | 98 | 3 | 1 | 238 | 1 | 248 | 4.84e-90 | 266 |
Msa0244890 | AT4G29930.6 | 55.417 | 240 | 87 | 3 | 1 | 238 | 1 | 222 | 8.75e-88 | 259 |
Msa0244890 | AT4G29930.2 | 55.000 | 240 | 85 | 3 | 1 | 238 | 1 | 219 | 7.94e-87 | 257 |
Msa0244890 | AT5G57150.5 | 65.596 | 218 | 67 | 6 | 1 | 215 | 1 | 213 | 1.63e-86 | 256 |
Msa0244890 | AT5G57150.2 | 63.801 | 221 | 71 | 6 | 1 | 217 | 1 | 216 | 1.47e-85 | 254 |
Msa0244890 | AT5G57150.3 | 64.384 | 219 | 69 | 6 | 1 | 215 | 1 | 214 | 1.49e-85 | 254 |
Msa0244890 | AT5G57150.4 | 64.384 | 219 | 69 | 6 | 1 | 215 | 1 | 214 | 6.71e-84 | 251 |
Msa0244890 | AT4G29930.3 | 54.825 | 228 | 89 | 3 | 1 | 216 | 1 | 226 | 6.79e-80 | 241 |
Msa0244890 | AT4G29930.7 | 54.825 | 228 | 89 | 3 | 1 | 216 | 1 | 226 | 6.79e-80 | 241 |
Msa0244890 | AT4G29930.5 | 54.587 | 218 | 76 | 3 | 1 | 216 | 1 | 197 | 1.58e-76 | 231 |
Msa0244890 | AT4G29930.4 | 54.857 | 175 | 65 | 3 | 1 | 163 | 1 | 173 | 8.28e-55 | 174 |
Msa0244890 | AT1G12860.1 | 33.690 | 187 | 111 | 6 | 49 | 232 | 264 | 440 | 1.12e-18 | 84.7 |
Msa0244890 | AT3G26744.1 | 32.447 | 188 | 116 | 5 | 49 | 232 | 304 | 484 | 2.24e-18 | 84.0 |
Msa0244890 | AT3G26744.4 | 32.447 | 188 | 116 | 5 | 49 | 232 | 304 | 484 | 2.24e-18 | 84.0 |
Msa0244890 | AT3G26744.2 | 32.447 | 188 | 116 | 5 | 49 | 232 | 304 | 484 | 2.24e-18 | 84.0 |
Msa0244890 | AT2G28160.2 | 31.013 | 158 | 93 | 4 | 51 | 205 | 130 | 274 | 2.10e-17 | 80.1 |
Msa0244890 | AT2G28160.1 | 31.013 | 158 | 93 | 4 | 51 | 205 | 130 | 274 | 2.25e-17 | 80.1 |
Msa0244890 | AT2G16910.1 | 31.183 | 186 | 113 | 5 | 51 | 225 | 313 | 494 | 3.51e-17 | 80.9 |
Msa0244890 | AT3G26744.6 | 34.568 | 162 | 95 | 5 | 49 | 206 | 304 | 458 | 1.81e-16 | 78.6 |
Msa0244890 | AT1G01260.1 | 29.518 | 166 | 82 | 3 | 53 | 218 | 434 | 564 | 5.61e-16 | 77.4 |
Msa0244890 | AT1G01260.2 | 29.518 | 166 | 82 | 3 | 53 | 218 | 434 | 564 | 5.61e-16 | 77.4 |
Msa0244890 | AT1G01260.3 | 29.518 | 166 | 82 | 3 | 53 | 218 | 434 | 564 | 5.61e-16 | 77.4 |
Msa0244890 | AT2G46510.1 | 61.818 | 55 | 21 | 0 | 53 | 107 | 396 | 450 | 2.87e-15 | 75.1 |
Msa0244890 | AT1G12860.2 | 34.783 | 161 | 92 | 6 | 49 | 206 | 264 | 414 | 3.46e-15 | 74.7 |
Msa0244890 | AT5G46760.1 | 29.032 | 186 | 115 | 7 | 53 | 233 | 416 | 589 | 3.56e-15 | 74.7 |
Msa0244890 | AT4G17880.1 | 30.625 | 160 | 78 | 4 | 53 | 202 | 417 | 553 | 3.04e-14 | 72.0 |
Msa0244890 | AT4G16430.1 | 46.053 | 76 | 40 | 1 | 53 | 127 | 321 | 396 | 3.77e-14 | 71.6 |
Msa0244890 | AT1G32640.1 | 31.333 | 150 | 91 | 4 | 53 | 202 | 453 | 590 | 6.39e-14 | 71.2 |
Msa0244890 | AT4G37850.2 | 29.444 | 180 | 107 | 6 | 53 | 228 | 153 | 316 | 1.45e-13 | 69.3 |
Msa0244890 | AT4G37850.1 | 29.444 | 180 | 107 | 6 | 53 | 228 | 153 | 316 | 1.45e-13 | 69.3 |
Msa0244890 | AT1G63650.3 | 29.213 | 178 | 116 | 4 | 41 | 212 | 397 | 570 | 5.18e-13 | 68.6 |
Msa0244890 | AT1G63650.1 | 29.213 | 178 | 116 | 4 | 41 | 212 | 397 | 570 | 5.18e-13 | 68.6 |
Msa0244890 | AT1G63650.2 | 29.213 | 178 | 116 | 4 | 41 | 212 | 397 | 570 | 5.18e-13 | 68.6 |
Msa0244890 | AT5G46830.1 | 27.473 | 182 | 111 | 3 | 53 | 228 | 344 | 510 | 4.23e-12 | 65.9 |
Msa0244890 | AT4G21330.1 | 30.357 | 168 | 107 | 4 | 51 | 218 | 31 | 188 | 5.26e-12 | 63.5 |
Msa0244890 | AT1G10610.1 | 27.513 | 189 | 120 | 4 | 51 | 232 | 263 | 441 | 1.25e-11 | 64.3 |
Msa0244890 | AT1G10610.2 | 27.513 | 189 | 120 | 4 | 51 | 232 | 233 | 411 | 1.62e-11 | 63.9 |
Msa0244890 | AT1G10610.3 | 26.064 | 188 | 124 | 3 | 51 | 232 | 166 | 344 | 1.66e-11 | 63.5 |
Msa0244890 | AT2G22770.1 | 23.834 | 193 | 117 | 3 | 33 | 209 | 113 | 291 | 5.29e-11 | 62.0 |
Msa0244890 | AT4G00870.1 | 43.333 | 60 | 34 | 0 | 53 | 112 | 250 | 309 | 8.89e-11 | 61.6 |
Find 64 sgRNAs with CRISPR-Local
Find 445 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTAAGGTGGTTGGTTTATT+TGG | 0.143628 | 2_2:+23702549 | None:intergenic |
TCTTGATCAAAATCATAATT+TGG | 0.197391 | 2_2:+23701218 | None:intergenic |
CTGATCTGTTCTCTTCTTCT+TGG | 0.200519 | 2_2:+23701175 | None:intergenic |
TGATGATTGAAAGAAATTTA+AGG | 0.231892 | 2_2:+23702533 | None:intergenic |
GGATAAAGCTTCAATTATTA+AGG | 0.255192 | 2_2:-23701336 | Msa0244890:CDS |
TAATTTGGATTAATATTATT+AGG | 0.270353 | 2_2:+23701233 | None:intergenic |
ACCTATCAAGCTCTTGGGTT+TGG | 0.289916 | 2_2:+23702407 | None:intergenic |
GTGATGAGTACAAGCTTTAC+TGG | 0.315934 | 2_2:-23702447 | Msa0244890:CDS |
CCTGATGATGCTGCACCATC+TGG | 0.327488 | 2_2:+23702232 | None:intergenic |
GAGATAATGGAACTTGAATC+TGG | 0.329852 | 2_2:-23701260 | Msa0244890:CDS |
TGTTTACCTTGCTAATGTTT+GGG | 0.357210 | 2_2:+23702128 | None:intergenic |
GATTATTCAAGCTGAGATAA+TGG | 0.358095 | 2_2:-23701273 | Msa0244890:CDS |
TCCCTTCATTAGATGCTCAT+AGG | 0.368457 | 2_2:+23694367 | None:intergenic |
TTTACCTCAAGGACTTCAAT+TGG | 0.374167 | 2_2:+23701122 | None:intergenic |
ATTGTTACCTATCAAGCTCT+TGG | 0.383647 | 2_2:+23702401 | None:intergenic |
ATAACATGTTAAGACATAAA+TGG | 0.386214 | 2_2:+23693985 | None:intergenic |
ATGTTTACCTTGCTAATGTT+TGG | 0.403010 | 2_2:+23702127 | None:intergenic |
TAGATGCTCATAGGGCTTAG+AGG | 0.411365 | 2_2:+23694376 | None:intergenic |
TTGTGGTTGCAGCTGGGGAT+TGG | 0.412240 | 2_2:-23702290 | Msa0244890:intron |
TTGTTACCTATCAAGCTCTT+GGG | 0.420680 | 2_2:+23702402 | None:intergenic |
TTGCAGCTGGGGATTGGATG+AGG | 0.423798 | 2_2:-23702284 | Msa0244890:intron |
TCCAAACCCAAGAGCTTGAT+AGG | 0.430262 | 2_2:-23702408 | Msa0244890:intron |
TGAAAGAAATTTAAGGTGGT+TGG | 0.431422 | 2_2:+23702540 | None:intergenic |
GTTGTTAAAGTTGAAATTGA+AGG | 0.431964 | 2_2:+23702484 | None:intergenic |
CCCTTCATTAGATGCTCATA+GGG | 0.440042 | 2_2:+23694368 | None:intergenic |
TATCAAGCTCTTGGGTTTGG+AGG | 0.453409 | 2_2:+23702410 | None:intergenic |
ACATTGTCTCTGAAAGGAAT+AGG | 0.453984 | 2_2:-23702195 | Msa0244890:CDS |
GCCCTATGAGCATCTAATGA+AGG | 0.457378 | 2_2:-23694369 | Msa0244890:intron |
CCAGATGGTGCAGCATCATC+AGG | 0.460325 | 2_2:-23702232 | Msa0244890:CDS |
TGAGCTTGACATGTAACAAA+AGG | 0.468788 | 2_2:-23699779 | Msa0244890:CDS |
CTGATGATGCTGCACCATCT+GGG | 0.496200 | 2_2:+23702233 | None:intergenic |
AGCCACTAGTATATAAGTAT+AGG | 0.503320 | 2_2:-23694137 | Msa0244890:three_prime_UTR |
GCAGCTTAGGGTTACATACA+TGG | 0.504078 | 2_2:-23699820 | Msa0244890:intron |
AAGAGCTTCCTGTGTTGCTA+AGG | 0.527358 | 2_2:-23701199 | Msa0244890:CDS |
TTGGGTTTGGAGGAACATGT+TGG | 0.533281 | 2_2:+23702420 | None:intergenic |
CCCTATGAGCATCTAATGAA+GGG | 0.535852 | 2_2:-23694368 | Msa0244890:intron |
AATTTCAACTTTAACAACCA+TGG | 0.540733 | 2_2:-23702479 | Msa0244890:exon |
AGTATATAAGTATAGGATTG+AGG | 0.543177 | 2_2:-23694130 | Msa0244890:three_prime_UTR |
CTAAGAACATTGTCTCTGAA+AGG | 0.544041 | 2_2:-23702201 | Msa0244890:CDS |
GAGCTTGACATGTAACAAAA+GGG | 0.547151 | 2_2:-23699778 | Msa0244890:CDS |
CTTTCCAATTGAAGTCCTTG+AGG | 0.548914 | 2_2:-23701126 | Msa0244890:intron |
ATTCCATCACTATATATACT+AGG | 0.557096 | 2_2:-23702586 | Msa0244890:five_prime_UTR |
TAATAATTTGAAAATTGAGT+AGG | 0.560330 | 2_2:+23694056 | None:intergenic |
TGATGATGCTGCACCATCTG+GGG | 0.561453 | 2_2:+23702234 | None:intergenic |
TTCTTGGACCTTAGCAACAC+AGG | 0.566724 | 2_2:+23701191 | None:intergenic |
AGGGTCATTAAGAGCTGCAA+TGG | 0.567337 | 2_2:+23694396 | None:intergenic |
CTCATCACCAATGTTCTCCA+TGG | 0.572679 | 2_2:+23702462 | None:intergenic |
ATCCTATACTTATATACTAG+TGG | 0.576611 | 2_2:+23694135 | None:intergenic |
AGATGCTCATAGGGCTTAGA+GGG | 0.580755 | 2_2:+23694377 | None:intergenic |
TTGCCTAGTATATATAGTGA+TGG | 0.583665 | 2_2:+23702583 | None:intergenic |
TGATGAGTACAAGCTTTACT+GGG | 0.584970 | 2_2:-23702446 | Msa0244890:CDS |
TTTGAAGACAGTCTTCATTG+AGG | 0.586246 | 2_2:-23699667 | Msa0244890:intron |
TTAACAACCATGGAGAACAT+TGG | 0.592898 | 2_2:-23702469 | Msa0244890:exon |
TTGTCTCTGAAAGGAATAGG+AGG | 0.600641 | 2_2:-23702192 | Msa0244890:CDS |
AGATAATGGAACTTGAATCT+GGG | 0.607917 | 2_2:-23701259 | Msa0244890:CDS |
TAACAAAAGGGCAGACACAA+TGG | 0.621554 | 2_2:-23699766 | Msa0244890:CDS |
ACTCTTTGCACTTAGAGCAG+TGG | 0.626022 | 2_2:-23702152 | Msa0244890:CDS |
TATGATTCAAGCTCCCCAGA+TGG | 0.634637 | 2_2:-23702247 | Msa0244890:CDS |
CAGCTTAGGGTTACATACAT+GGG | 0.636587 | 2_2:-23699819 | Msa0244890:CDS |
CTATGAAAATACGAAAGCCA+CGG | 0.657789 | 2_2:+23694105 | None:intergenic |
AGTGGTCCCAAACATTAGCA+AGG | 0.661525 | 2_2:-23702134 | Msa0244890:intron |
TGATTGAAAGAAATTTAAGG+TGG | 0.679867 | 2_2:+23702536 | None:intergenic |
AGTATAGGATTGAGGAACCG+TGG | 0.680536 | 2_2:-23694122 | Msa0244890:three_prime_UTR |
ATACATGGGAGAGAATACAA+TGG | 0.777577 | 2_2:-23699805 | Msa0244890:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTTTTTTTTTTTTTTT+GGG | + | chr2_2:23700076-23700095 | None:intergenic | 0.0% |
!!! | TTTTTTTTTTTTTTTTTTTT+TGG | + | chr2_2:23700076-23700095 | None:intergenic | 0.0% |
!!! | TTATTTTAATTTTTAATATT+CGG | - | chr2_2:23700808-23700827 | Msa0244890:intron | 0.0% |
!! | TACTAAATATATGTTATAAA+TGG | + | chr2_2:23694894-23694913 | None:intergenic | 10.0% |
!! | TAATTTGGATTAATATTATT+AGG | + | chr2_2:23695321-23695340 | None:intergenic | 10.0% |
!! | TGTATATAATATTAATTGAA+GGG | - | chr2_2:23695797-23695816 | Msa0244890:intron | 10.0% |
!! | AATCAAATCAATATTTATAT+TGG | + | chr2_2:23696214-23696233 | None:intergenic | 10.0% |
!!! | TTTTATTTTAATTTTTTGAC+AGG | + | chr2_2:23696288-23696307 | None:intergenic | 10.0% |
!! | TATAATCTATATTTATTGTT+GGG | + | chr2_2:23696568-23696587 | None:intergenic | 10.0% |
!!! | TTTTTGTTTTATATTATTTG+AGG | + | chr2_2:23697049-23697068 | None:intergenic | 10.0% |
!! | TCAATGTAAATTATATTTAA+AGG | - | chr2_2:23697117-23697136 | Msa0244890:intron | 10.0% |
!!! | ACAATTTTTTAAATATTGTT+TGG | + | chr2_2:23697212-23697231 | None:intergenic | 10.0% |
!! | TTATTAAATTATTGTTTACT+TGG | + | chr2_2:23698468-23698487 | None:intergenic | 10.0% |
!! | TTTCTTATATTAAGATTAAA+TGG | + | chr2_2:23699887-23699906 | None:intergenic | 10.0% |
!!! | TTTTATTTAACTAAAAAGTA+CGG | + | chr2_2:23701738-23701757 | None:intergenic | 10.0% |
!!! | CATTTTTTTAATTCAAAATT+AGG | - | chr2_2:23701975-23701994 | Msa0244890:intron | 10.0% |
!!! | AATTAATTTACTTTTGTACT+TGG | + | chr2_2:23694583-23694602 | None:intergenic | 15.0% |
!! | AGTACAAAAGTAAATTAATT+TGG | - | chr2_2:23694583-23694602 | Msa0244890:intron | 15.0% |
!! | AAACAATACATGTATATATA+CGG | + | chr2_2:23694621-23694640 | None:intergenic | 15.0% |
!!! | TTTTTTAAACATTTTGTTAG+AGG | - | chr2_2:23694704-23694723 | Msa0244890:intron | 15.0% |
!! | AATAGTTGATTAGAATAATT+CGG | + | chr2_2:23695735-23695754 | None:intergenic | 15.0% |
!! | GTGTATATAATATTAATTGA+AGG | - | chr2_2:23695796-23695815 | Msa0244890:intron | 15.0% |
!! | ATAATCTATATTTATTGTTG+GGG | + | chr2_2:23696567-23696586 | None:intergenic | 15.0% |
!! | CTATAATCTATATTTATTGT+TGG | + | chr2_2:23696569-23696588 | None:intergenic | 15.0% |
!! | AATAAAGAAAGTGAAATTAA+AGG | + | chr2_2:23696921-23696940 | None:intergenic | 15.0% |
!! | TAACTAATTGAATTATGTTT+CGG | + | chr2_2:23697263-23697282 | None:intergenic | 15.0% |
!!! | GATTTTTTTAAGTAATTTAG+TGG | + | chr2_2:23697421-23697440 | None:intergenic | 15.0% |
!!! | TGAACACTTTTAAATAAAAA+AGG | - | chr2_2:23697651-23697670 | Msa0244890:intron | 15.0% |
!! | TTAAATGAAAGAGTTAAAAA+AGG | - | chr2_2:23697742-23697761 | Msa0244890:intron | 15.0% |
!! | TAAATGAAAGAGTTAAAAAA+GGG | - | chr2_2:23697743-23697762 | Msa0244890:intron | 15.0% |
!! | AATATAAGAATAATTGACAA+AGG | - | chr2_2:23698295-23698314 | Msa0244890:intron | 15.0% |
!! | ATATAAGAATAATTGACAAA+GGG | - | chr2_2:23698296-23698315 | Msa0244890:intron | 15.0% |
!!! | GTTACCTTATTTATTTATTT+CGG | - | chr2_2:23698785-23698804 | Msa0244890:intron | 15.0% |
!!! | ATATCTTTTTAATAGTTGAT+CGG | + | chr2_2:23699126-23699145 | None:intergenic | 15.0% |
!! | ATCAACTATTAAAAAGATAT+GGG | - | chr2_2:23699126-23699145 | Msa0244890:intron | 15.0% |
!!! | TAAAAAAAAGTTACTTGTTT+TGG | - | chr2_2:23699569-23699588 | Msa0244890:intron | 15.0% |
!!! | AAGAAACAATTTTTTTTATG+TGG | - | chr2_2:23699901-23699920 | Msa0244890:intron | 15.0% |
!!! | TTTTTTTTTTTTTTGGGATA+AGG | + | chr2_2:23700070-23700089 | None:intergenic | 15.0% |
!! | ACTATAAAAATTTAACTCAT+GGG | + | chr2_2:23700330-23700349 | None:intergenic | 15.0% |
!! | TACTATAAAAATTTAACTCA+TGG | + | chr2_2:23700331-23700350 | None:intergenic | 15.0% |
!! | AATACGGAAAAAATTATATA+TGG | + | chr2_2:23700476-23700495 | None:intergenic | 15.0% |
!! | TATAAAATAGATGAGAAATA+CGG | + | chr2_2:23700492-23700511 | None:intergenic | 15.0% |
!!! | TATTTTCCTATTTTGTTAAA+AGG | + | chr2_2:23700551-23700570 | None:intergenic | 15.0% |
!!! | ATAAGTCTTTAATTTAATGT+TGG | + | chr2_2:23700590-23700609 | None:intergenic | 15.0% |
!! | AAAATCTCTATTAATTGATT+TGG | + | chr2_2:23700618-23700637 | None:intergenic | 15.0% |
!! | AATTCAATATAAAATCATGT+TGG | - | chr2_2:23700648-23700667 | Msa0244890:intron | 15.0% |
!!! | AACTAATAAATACTTTTTCA+GGG | + | chr2_2:23700895-23700914 | None:intergenic | 15.0% |
!! | AACATGCATTATTATATATA+GGG | - | chr2_2:23701150-23701169 | Msa0244890:CDS | 15.0% |
!! | CTCATTTAAATAGTAAAATA+TGG | + | chr2_2:23701261-23701280 | None:intergenic | 15.0% |
!!! | TTATTTTTAAAATGTTGTGT+TGG | + | chr2_2:23701353-23701372 | None:intergenic | 15.0% |
!! | ATAAGTATTATAACTTATCA+TGG | - | chr2_2:23701791-23701810 | Msa0244890:intron | 15.0% |
!!! | TAATGAGGTATTATTTTTTA+GGG | + | chr2_2:23701860-23701879 | None:intergenic | 15.0% |
!!! | ATAATGAGGTATTATTTTTT+AGG | + | chr2_2:23701861-23701880 | None:intergenic | 15.0% |
!! | AGAAAATAAAATAAAATGAG+AGG | - | chr2_2:23702032-23702051 | Msa0244890:intron | 15.0% |
!! | TAATAATTTGAAAATTGAGT+AGG | + | chr2_2:23702498-23702517 | None:intergenic | 15.0% |
!!! | ACTCAATTTTCAAATTATTA+AGG | - | chr2_2:23702498-23702517 | Msa0244890:five_prime_UTR | 15.0% |
!! | TGATGATTGAAAGAAATTTA+AGG | + | chr2_2:23694021-23694040 | None:intergenic | 20.0% |
!!! | ATCTTGATAATTGAGATATA+TGG | - | chr2_2:23694238-23694257 | Msa0244890:intron | 20.0% |
!!! | TTTGTTTTGTTTGAATTAAG+TGG | - | chr2_2:23694527-23694546 | Msa0244890:intron | 20.0% |
!! | AATTGTAAAATCAAAATCGA+TGG | + | chr2_2:23694937-23694956 | None:intergenic | 20.0% |
!! | ATAATTACTATACCATATGA+TGG | + | chr2_2:23695127-23695146 | None:intergenic | 20.0% |
!! | CATATGGTATAGTAATTATT+TGG | - | chr2_2:23695128-23695147 | Msa0244890:intron | 20.0% |
!! | TCTTGATCAAAATCATAATT+TGG | + | chr2_2:23695336-23695355 | None:intergenic | 20.0% |
!! | AGAAAAAGTTATTATTGCAT+TGG | - | chr2_2:23695831-23695850 | Msa0244890:intron | 20.0% |
!!! | CACTTTTAAGTATAAGAATT+AGG | + | chr2_2:23695938-23695957 | None:intergenic | 20.0% |
!! | ACAAAAATAAGACATTGTAT+AGG | - | chr2_2:23696169-23696188 | Msa0244890:intron | 20.0% |
!! | CAAAAATAAGACATTGTATA+GGG | - | chr2_2:23696170-23696189 | Msa0244890:intron | 20.0% |
!!! | TGTCTATTTTATTAGAGAAA+TGG | + | chr2_2:23696341-23696360 | None:intergenic | 20.0% |
!! | TCAGATAAAAAAAATAGTAG+TGG | - | chr2_2:23696362-23696381 | Msa0244890:intron | 20.0% |
!! | CAGATAAAAAAAATAGTAGT+GGG | - | chr2_2:23696363-23696382 | Msa0244890:intron | 20.0% |
!!! | CTAATATATTTTCTCTACTA+GGG | + | chr2_2:23696463-23696482 | None:intergenic | 20.0% |
!! | GAACATGAACATAAAAAATT+AGG | + | chr2_2:23696486-23696505 | None:intergenic | 20.0% |
!! | TAATCTATATTTATTGTTGG+GGG | + | chr2_2:23696566-23696585 | None:intergenic | 20.0% |
!! | TGATGCTAAAAAAATAAATG+TGG | - | chr2_2:23696625-23696644 | Msa0244890:intron | 20.0% |
!! | GATGCTAAAAAAATAAATGT+GGG | - | chr2_2:23696626-23696645 | Msa0244890:intron | 20.0% |
!! | ATGCTAAAAAAATAAATGTG+GGG | - | chr2_2:23696627-23696646 | Msa0244890:intron | 20.0% |
!!! | TCCTATTTAATTTGCTTTAT+AGG | - | chr2_2:23696994-23697013 | Msa0244890:intron | 20.0% |
!! | ACCTATAAAGCAAATTAAAT+AGG | + | chr2_2:23696998-23697017 | None:intergenic | 20.0% |
!!! | ACATTTTAAGATGAATAAGT+GGG | + | chr2_2:23697165-23697184 | None:intergenic | 20.0% |
!! | AACTAATTGAATTATGTTTC+GGG | + | chr2_2:23697262-23697281 | None:intergenic | 20.0% |
!! | AAATATTGTTAGCTATTCAT+CGG | - | chr2_2:23697448-23697467 | Msa0244890:intron | 20.0% |
!! | AAATAAAAAAGGCAATAATG+AGG | - | chr2_2:23697662-23697681 | Msa0244890:intron | 20.0% |
!! | AATAAAAAAGGCAATAATGA+GGG | - | chr2_2:23697663-23697682 | Msa0244890:intron | 20.0% |
!! | AAATGAAAGAGTTAAAAAAG+GGG | - | chr2_2:23697744-23697763 | Msa0244890:intron | 20.0% |
!! | AAGCACAATATTTAGAAAAT+TGG | + | chr2_2:23698070-23698089 | None:intergenic | 20.0% |
!!! | TATAGAATTTTAACTCTTCA+TGG | - | chr2_2:23698128-23698147 | Msa0244890:intron | 20.0% |
!! | ACTAATTAGTGCTATATATT+TGG | + | chr2_2:23698265-23698284 | None:intergenic | 20.0% |
!! | TATGCCGAAATAAATAAATA+AGG | + | chr2_2:23698792-23698811 | None:intergenic | 20.0% |
!! | AAAAAAAAAATTAAACCACG+CGG | + | chr2_2:23698829-23698848 | None:intergenic | 20.0% |
!! | GATCAACTATTAAAAAGATA+TGG | - | chr2_2:23699125-23699144 | Msa0244890:intron | 20.0% |
!! | TCAGTAACTCTATATATTTA+TGG | - | chr2_2:23700006-23700025 | Msa0244890:intron | 20.0% |
!! | CAGTAACTCTATATATTTAT+GGG | - | chr2_2:23700007-23700026 | Msa0244890:intron | 20.0% |
!!! | ATATTTTAAATTGTTCCTCA+TGG | + | chr2_2:23700040-23700059 | None:intergenic | 20.0% |
!! | AAAATTTATTTCACACTCTT+AGG | + | chr2_2:23700143-23700162 | None:intergenic | 20.0% |
!! | GAAAAAATTATATATGGACA+AGG | + | chr2_2:23700470-23700489 | None:intergenic | 20.0% |
!! | TACAGTATAATATTATCACA+TGG | + | chr2_2:23700524-23700543 | None:intergenic | 20.0% |
!!! | TACTTTCCTTTTAACAAAAT+AGG | - | chr2_2:23700542-23700561 | Msa0244890:intron | 20.0% |
!! | AGAAACAAAAAATATGAATG+TGG | + | chr2_2:23700740-23700759 | None:intergenic | 20.0% |
!!! | CAACTAATAAATACTTTTTC+AGG | + | chr2_2:23700896-23700915 | None:intergenic | 20.0% |
!!! | AAATTAACCTTATTTAGTGT+TGG | - | chr2_2:23700995-23701014 | Msa0244890:intron | 20.0% |
!! | GAACATGCATTATTATATAT+AGG | - | chr2_2:23701149-23701168 | Msa0244890:CDS | 20.0% |
!! | CTCAATTGAAAAGAATAAAA+AGG | + | chr2_2:23701436-23701455 | None:intergenic | 20.0% |
!!! | CTTTTTATTCTTTTCAATTG+AGG | - | chr2_2:23701434-23701453 | Msa0244890:intron | 20.0% |
!! | AGAAATTTACTTATTACTAG+TGG | - | chr2_2:23701526-23701545 | Msa0244890:intron | 20.0% |
!! | ATTATAACTTATCATGGATA+TGG | - | chr2_2:23701797-23701816 | Msa0244890:intron | 20.0% |
!!! | AATGAGGTATTATTTTTTAG+GGG | + | chr2_2:23701859-23701878 | None:intergenic | 20.0% |
!! | TATTACAATGACAAATAATG+AGG | + | chr2_2:23701875-23701894 | None:intergenic | 20.0% |
!!! | TTTTAATTCAAAATTAGGGA+AGG | - | chr2_2:23701980-23701999 | Msa0244890:intron | 20.0% |
!! | TTTAATTCAAAATTAGGGAA+GGG | - | chr2_2:23701981-23702000 | Msa0244890:intron | 20.0% |
!!! | GTTTTATCCTTTTTATTTTC+AGG | - | chr2_2:23702087-23702106 | Msa0244890:intron | 20.0% |
!! | ATAACATGTTAAGACATAAA+TGG | + | chr2_2:23702569-23702588 | None:intergenic | 20.0% |
! | ATTCCATCACTATATATACT+AGG | - | chr2_2:23693965-23693984 | Msa0244890:three_prime_UTR | 25.0% |
! | TGATTGAAAGAAATTTAAGG+TGG | + | chr2_2:23694018-23694037 | None:intergenic | 25.0% |
! | GTTGTTAAAGTTGAAATTGA+AGG | + | chr2_2:23694070-23694089 | None:intergenic | 25.0% |
! | AATTTCAACTTTAACAACCA+TGG | - | chr2_2:23694072-23694091 | Msa0244890:three_prime_UTR | 25.0% |
! | ATAATTGAGATATATGGTTG+TGG | - | chr2_2:23694244-23694263 | Msa0244890:intron | 25.0% |
!! | GTAAACATCACTAATTTTAG+CGG | - | chr2_2:23694439-23694458 | Msa0244890:CDS | 25.0% |
! | AATTAGTACTACTCAATTTC+TGG | - | chr2_2:23694482-23694501 | Msa0244890:intron | 25.0% |
! | ATTAGTACTACTCAATTTCT+GGG | - | chr2_2:23694483-23694502 | Msa0244890:intron | 25.0% |
! | TTTGTTTGAATTAAGTGGTT+TGG | - | chr2_2:23694532-23694551 | Msa0244890:intron | 25.0% |
! | TTGTTTGAATTAAGTGGTTT+GGG | - | chr2_2:23694533-23694552 | Msa0244890:intron | 25.0% |
!!! | TGTATTTTAGGATTTAAGTC+GGG | + | chr2_2:23694745-23694764 | None:intergenic | 25.0% |
!!! | CTGTATTTTAGGATTTAAGT+CGG | + | chr2_2:23694746-23694765 | None:intergenic | 25.0% |
!! | CGATAGATTTTGTCTATTTT+GGG | + | chr2_2:23694817-23694836 | None:intergenic | 25.0% |
!! | TCGATAGATTTTGTCTATTT+TGG | + | chr2_2:23694818-23694837 | None:intergenic | 25.0% |
! | AATTTCTTTCTAATGATGAG+TGG | - | chr2_2:23695171-23695190 | Msa0244890:intron | 25.0% |
! | GGATAAAGCTTCAATTATTA+AGG | - | chr2_2:23695215-23695234 | Msa0244890:intron | 25.0% |
!!! | AAACAACGTTCATTTTGAAA+CGG | + | chr2_2:23695653-23695672 | None:intergenic | 25.0% |
! | TTCAAAATGAACGTTGTTTA+AGG | - | chr2_2:23695654-23695673 | Msa0244890:intron | 25.0% |
! | TTAAGGTGGTGATTTATAAT+TGG | + | chr2_2:23696410-23696429 | None:intergenic | 25.0% |
! | TATAAATCACCACCTTAATA+AGG | - | chr2_2:23696412-23696431 | Msa0244890:intron | 25.0% |
! | ATAAATCACCACCTTAATAA+GGG | - | chr2_2:23696413-23696432 | Msa0244890:intron | 25.0% |
!! | GCTAATATATTTTCTCTACT+AGG | + | chr2_2:23696464-23696483 | None:intergenic | 25.0% |
! | GGTCATTAACAAAAAAATAG+TGG | + | chr2_2:23696541-23696560 | None:intergenic | 25.0% |
! | AGATTATAGAAGAGATTGTA+AGG | - | chr2_2:23696580-23696599 | Msa0244890:intron | 25.0% |
! | TGAGTGTGTAATTTGATATA+TGG | - | chr2_2:23696702-23696721 | Msa0244890:intron | 25.0% |
!! | AGGAAGAAGAAAATGAATTT+TGG | + | chr2_2:23697029-23697048 | None:intergenic | 25.0% |
! | TGTTAACTTAGCTATGTTTA+CGG | + | chr2_2:23697094-23697113 | None:intergenic | 25.0% |
!!! | CATTTTAAGATGAATAAGTG+GGG | + | chr2_2:23697164-23697183 | None:intergenic | 25.0% |
!!! | CACATTTTAAGATGAATAAG+TGG | + | chr2_2:23697166-23697185 | None:intergenic | 25.0% |
!!! | GTTAAAATTCACTTTTTTCG+AGG | + | chr2_2:23697399-23697418 | None:intergenic | 25.0% |
! | AAGATATTACAGCTAGAATA+AGG | - | chr2_2:23697548-23697567 | Msa0244890:intron | 25.0% |
! | AGATATTACAGCTAGAATAA+GGG | - | chr2_2:23697549-23697568 | Msa0244890:intron | 25.0% |
! | AAGTGTTCATTGTTCAATTA+TGG | + | chr2_2:23697640-23697659 | None:intergenic | 25.0% |
! | TTAAAAAAGGGGAGAAATAA+GGG | - | chr2_2:23697755-23697774 | Msa0244890:intron | 25.0% |
! | TAGTTGTTAACATTTGATGA+AGG | + | chr2_2:23697802-23697821 | None:intergenic | 25.0% |
!!! | TTCTAAAACGACACTTAAAA+AGG | + | chr2_2:23697836-23697855 | None:intergenic | 25.0% |
!! | GATTAAAATGAGGGTATAAT+AGG | + | chr2_2:23697902-23697921 | None:intergenic | 25.0% |
! | AAAAAATAGGAAATTATCCG+TGG | + | chr2_2:23697924-23697943 | None:intergenic | 25.0% |
! | TAAAGTGTGTGCAAAAAAAT+AGG | + | chr2_2:23697937-23697956 | None:intergenic | 25.0% |
! | ACAAAAAAATCCGAATTTGT+TGG | + | chr2_2:23698015-23698034 | None:intergenic | 25.0% |
! | TAAATATTGTGCTTATCTCT+TGG | - | chr2_2:23698076-23698095 | Msa0244890:intron | 25.0% |
! | TATTGTTTACTTGGTATTTC+AGG | + | chr2_2:23698459-23698478 | None:intergenic | 25.0% |
!! | GAAACACGTTTTCAAATTAT+TGG | + | chr2_2:23698755-23698774 | None:intergenic | 25.0% |
!! | TTTTCTTCTTCGTCTAATAA+TGG | - | chr2_2:23698864-23698883 | Msa0244890:intron | 25.0% |
!! | CATGCTATAATTTGCAAAAT+GGG | - | chr2_2:23698915-23698934 | Msa0244890:intron | 25.0% |
!!! | AGTTTAAGTTAGTAGTGTTT+TGG | - | chr2_2:23699036-23699055 | Msa0244890:intron | 25.0% |
!!! | GTTTAAGTTAGTAGTGTTTT+GGG | - | chr2_2:23699037-23699056 | Msa0244890:intron | 25.0% |
!!! | TTTAAGTTAGTAGTGTTTTG+GGG | - | chr2_2:23699038-23699057 | Msa0244890:intron | 25.0% |
!! | CAAAGAAAAACTTCTACTTT+TGG | - | chr2_2:23699266-23699285 | Msa0244890:intron | 25.0% |
!! | TGTCAAGATGAATATCTTTT+GGG | + | chr2_2:23699330-23699349 | None:intergenic | 25.0% |
! | CATTTGATAAAAAAAGCTGA+AGG | + | chr2_2:23699679-23699698 | None:intergenic | 25.0% |
! | AGAATAATCAATTTCAATGG+TGG | + | chr2_2:23699815-23699834 | None:intergenic | 25.0% |
! | ACCATTGAAATTGATTATTC+TGG | - | chr2_2:23699814-23699833 | Msa0244890:CDS | 25.0% |
! | ACCAGAATAATCAATTTCAA+TGG | + | chr2_2:23699818-23699837 | None:intergenic | 25.0% |
!!! | CATTTTGATTTGCTAATCTA+AGG | + | chr2_2:23700181-23700200 | None:intergenic | 25.0% |
! | AGTATAATATTATCACATGG+TGG | + | chr2_2:23700521-23700540 | None:intergenic | 25.0% |
!! | TCTTTAATTTAATGTTGGTG+TGG | + | chr2_2:23700585-23700604 | None:intergenic | 25.0% |
!! | TGTCCAATTTTATATTTCTC+AGG | - | chr2_2:23700762-23700781 | Msa0244890:intron | 25.0% |
! | TGCATTATTATATATAGGGT+TGG | - | chr2_2:23701154-23701173 | Msa0244890:CDS | 25.0% |
! | GCATTATTATATATAGGGTT+GGG | - | chr2_2:23701155-23701174 | Msa0244890:CDS | 25.0% |
! | CATTATTATATATAGGGTTG+GGG | - | chr2_2:23701156-23701175 | Msa0244890:CDS | 25.0% |
!!! | TTTTTCAAGGTGAATAACTA+GGG | + | chr2_2:23701197-23701216 | None:intergenic | 25.0% |
!!! | TTTTTTTGTCAAGTAGTCTA+GGG | + | chr2_2:23701233-23701252 | None:intergenic | 25.0% |
!!! | TTTTTTTTGTCAAGTAGTCT+AGG | + | chr2_2:23701234-23701253 | None:intergenic | 25.0% |
!! | TTTACTAAACCTTCTCTTTT+GGG | + | chr2_2:23701391-23701410 | None:intergenic | 25.0% |
!! | TTTTACTAAACCTTCTCTTT+TGG | + | chr2_2:23701392-23701411 | None:intergenic | 25.0% |
!! | TATTTGATTCAAGGATTTTG+AGG | - | chr2_2:23701461-23701480 | Msa0244890:intron | 25.0% |
! | TTATGACAAATCATTACTGA+AGG | - | chr2_2:23701680-23701699 | Msa0244890:intron | 25.0% |
! | TTAATTCAAAATTAGGGAAG+GGG | - | chr2_2:23701982-23702001 | Msa0244890:intron | 25.0% |
! | TCATTTGCCTGAAAATAAAA+AGG | + | chr2_2:23702097-23702116 | None:intergenic | 25.0% |
!!! | TTTTTATTTTCAGGCAAATG+AGG | - | chr2_2:23702096-23702115 | Msa0244890:intron | 25.0% |
!! | ACGGAATGAACAATTTTAAA+AGG | + | chr2_2:23702224-23702243 | None:intergenic | 25.0% |
! | CTATAAATAAGCACTTCATT+AGG | + | chr2_2:23702382-23702401 | None:intergenic | 25.0% |
! | ATCCTATACTTATATACTAG+TGG | + | chr2_2:23702419-23702438 | None:intergenic | 25.0% |
! | AGTATATAAGTATAGGATTG+AGG | - | chr2_2:23702421-23702440 | Msa0244890:CDS | 25.0% |
TTGCCTAGTATATATAGTGA+TGG | + | chr2_2:23693971-23693990 | None:intergenic | 30.0% | |
!! | TTTAAGGTGGTTGGTTTATT+TGG | + | chr2_2:23694005-23694024 | None:intergenic | 30.0% |
! | TGAAAGAAATTTAAGGTGGT+TGG | + | chr2_2:23694014-23694033 | None:intergenic | 30.0% |
TCACTTTGATTCAAGTATGA+AGG | - | chr2_2:23694183-23694202 | Msa0244890:intron | 30.0% | |
TGTTTACCTTGCTAATGTTT+GGG | + | chr2_2:23694426-23694445 | None:intergenic | 30.0% | |
ATGTTTACCTTGCTAATGTT+TGG | + | chr2_2:23694427-23694446 | None:intergenic | 30.0% | |
CGACTTAAATCCTAAAATAC+AGG | - | chr2_2:23694744-23694763 | Msa0244890:intron | 30.0% | |
! | GACTTTTGTAGAATCGATAT+AGG | + | chr2_2:23694961-23694980 | None:intergenic | 30.0% |
! | AAATCGAAGGATTTTACTCA+AGG | + | chr2_2:23694983-23695002 | None:intergenic | 30.0% |
AAAATCGCAATCAAAATCGA+AGG | + | chr2_2:23694834-23694853 | None:intergenic | 30.0% | |
TTGATGTCTTTGACATCTAA+TGG | - | chr2_2:23695091-23695110 | Msa0244890:intron | 30.0% | |
GGAAAATATCAACCATCATA+TGG | - | chr2_2:23695112-23695131 | Msa0244890:intron | 30.0% | |
!!! | TAGTGACTTTTTTTTCCAGA+TGG | - | chr2_2:23695194-23695213 | Msa0244890:intron | 30.0% |
! | TAATTGAAGCTTTATCCATC+TGG | + | chr2_2:23695212-23695231 | None:intergenic | 30.0% |
GATTATTCAAGCTGAGATAA+TGG | - | chr2_2:23695278-23695297 | Msa0244890:intron | 30.0% | |
!! | AGATAATGGAACTTGAATCT+GGG | - | chr2_2:23695292-23695311 | Msa0244890:intron | 30.0% |
!!! | AACGACACTCATTTTAAAAC+AGG | - | chr2_2:23695898-23695917 | Msa0244890:intron | 30.0% |
!!! | ACGACACTCATTTTAAAACA+GGG | - | chr2_2:23695899-23695918 | Msa0244890:intron | 30.0% |
AACAATGAAGTGTGAATCTA+AGG | + | chr2_2:23695975-23695994 | None:intergenic | 30.0% | |
!! | TTCTGAAGTTTGATGATAAG+AGG | + | chr2_2:23696108-23696127 | None:intergenic | 30.0% |
! | TTTATAATTGGTTCTCAGCA+TGG | + | chr2_2:23696398-23696417 | None:intergenic | 30.0% |
!! | AGTCTGATTTGGTATTTGAT+AGG | + | chr2_2:23696515-23696534 | None:intergenic | 30.0% |
!! | AATAGTGGATAAGTCTGATT+TGG | + | chr2_2:23696526-23696545 | None:intergenic | 30.0% |
GTTAACTTAGCTATGTTTAC+GGG | + | chr2_2:23697093-23697112 | None:intergenic | 30.0% | |
AGACATGCATTGTTATATGT+AGG | - | chr2_2:23697338-23697357 | Msa0244890:intron | 30.0% | |
GACATGCATTGTTATATGTA+GGG | - | chr2_2:23697339-23697358 | Msa0244890:intron | 30.0% | |
GTAAATAAGTAGAGTGTATG+AGG | + | chr2_2:23697377-23697396 | None:intergenic | 30.0% | |
GATATTACAGCTAGAATAAG+GGG | - | chr2_2:23697550-23697569 | Msa0244890:intron | 30.0% | |
ATATTACAGCTAGAATAAGG+GGG | - | chr2_2:23697551-23697570 | Msa0244890:intron | 30.0% | |
!! | CTTTTCCACTTTTGTAAAAG+TGG | + | chr2_2:23697609-23697628 | None:intergenic | 30.0% |
! | CTTTTACAAAAGTGGAAAAG+TGG | - | chr2_2:23697609-23697628 | Msa0244890:intron | 30.0% |
GTTAAAAAAGGGGAGAAATA+AGG | - | chr2_2:23697754-23697773 | Msa0244890:intron | 30.0% | |
AAACGACACTTAAAAAGGAA+CGG | + | chr2_2:23698387-23698406 | None:intergenic | 30.0% | |
!! | TATACCCTCATTTTAATCCA+CGG | - | chr2_2:23697904-23697923 | Msa0244890:intron | 30.0% |
! | TTATCCGTGGATTAAAATGA+GGG | + | chr2_2:23697911-23697930 | None:intergenic | 30.0% |
! | ATTATCCGTGGATTAAAATG+AGG | + | chr2_2:23697912-23697931 | None:intergenic | 30.0% |
CTTCATGGAACTATTATCAT+AGG | - | chr2_2:23698143-23698162 | Msa0244890:intron | 30.0% | |
!!! | GTGTCGTTTTGGTATTTTAA+GGG | + | chr2_2:23698340-23698359 | None:intergenic | 30.0% |
!!! | AGTGTCGTTTTGGTATTTTA+AGG | + | chr2_2:23698341-23698360 | None:intergenic | 30.0% |
!!! | CCTTTTTAAGTGTCGTTTTA+GGG | + | chr2_2:23697833-23697852 | None:intergenic | 30.0% |
!!! | TCCTTTTTAAGTGTCGTTTT+AGG | + | chr2_2:23697832-23697851 | None:intergenic | 30.0% |
AAACGACACTTAAAAAGGAA+CGG | - | chr2_2:23698387-23698406 | Msa0244890:intron | 30.0% | |
CTTCAAAATAGAACTCCATT+AGG | - | chr2_2:23698529-23698548 | Msa0244890:intron | 30.0% | |
GCAAAGTTTACAAAACCTAA+TGG | + | chr2_2:23698547-23698566 | None:intergenic | 30.0% | |
TGAATCAAAGTAGAAAAGAG+TGG | - | chr2_2:23698651-23698670 | Msa0244890:intron | 30.0% | |
CACTAGTGATACATGAATTA+GGG | - | chr2_2:23698697-23698716 | Msa0244890:intron | 30.0% | |
TCTAATAATGGCAAAATGTC+AGG | - | chr2_2:23698876-23698895 | Msa0244890:intron | 30.0% | |
! | GCATGCTATAATTTGCAAAA+TGG | - | chr2_2:23698914-23698933 | Msa0244890:intron | 30.0% |
! | CTGTCAAGATGAATATCTTT+TGG | + | chr2_2:23699331-23699350 | None:intergenic | 30.0% |
CTTGTTAATAAGTGTTCTCT+AGG | - | chr2_2:23699459-23699478 | Msa0244890:intron | 30.0% | |
! | TGTTCTCTAGGAAATTGTTA+AGG | - | chr2_2:23699471-23699490 | Msa0244890:intron | 30.0% |
CAACATGTGTTAATGAATGT+TGG | + | chr2_2:23699708-23699727 | None:intergenic | 30.0% | |
GCACCTGAGAAATATAAAAT+TGG | + | chr2_2:23700768-23700787 | None:intergenic | 30.0% | |
GAATACACCAACACTAAATA+AGG | + | chr2_2:23701005-23701024 | None:intergenic | 30.0% | |
CAAAATATGAAGTTCTATCG+TGG | + | chr2_2:23701102-23701121 | None:intergenic | 30.0% | |
!!! | CTTTTTCAAGGTGAATAACT+AGG | + | chr2_2:23701198-23701217 | None:intergenic | 30.0% |
CTAGTTATTCACCTTGAAAA+AGG | - | chr2_2:23701196-23701215 | Msa0244890:CDS | 30.0% | |
!! | GTTAGAATTCACCTTTTTCA+AGG | + | chr2_2:23701210-23701229 | None:intergenic | 30.0% |
!!! | TTTTTTGTCAAGTAGTCTAG+GGG | + | chr2_2:23701232-23701251 | None:intergenic | 30.0% |
TAAATTAGTCCCAAAAGAGA+AGG | - | chr2_2:23701379-23701398 | Msa0244890:intron | 30.0% | |
! | TGAGGTATCTATTTGATTCA+AGG | - | chr2_2:23701452-23701471 | Msa0244890:intron | 30.0% |
!! | TCAGTAATGGATATTACTGA+GGG | - | chr2_2:23701585-23701604 | Msa0244890:intron | 30.0% |
ATTATTCCCTCAGTAATTAC+TGG | - | chr2_2:23701703-23701722 | Msa0244890:intron | 30.0% | |
TTATTCCCTCAGTAATTACT+GGG | - | chr2_2:23701704-23701723 | Msa0244890:intron | 30.0% | |
! | AAAATATATCTAGCTTGACG+TGG | - | chr2_2:23701938-23701957 | Msa0244890:intron | 30.0% |
TAATTCAAAATTAGGGAAGG+GGG | - | chr2_2:23701983-23702002 | Msa0244890:intron | 30.0% | |
AGCCACTAGTATATAAGTAT+AGG | - | chr2_2:23702414-23702433 | Msa0244890:CDS | 30.0% | |
TTAACAACCATGGAGAACAT+TGG | - | chr2_2:23694082-23694101 | Msa0244890:three_prime_UTR | 35.0% | |
TGATGAGTACAAGCTTTACT+GGG | - | chr2_2:23694105-23694124 | Msa0244890:three_prime_UTR | 35.0% | |
TTGTTACCTATCAAGCTCTT+GGG | + | chr2_2:23694152-23694171 | None:intergenic | 35.0% | |
ATTGTTACCTATCAAGCTCT+TGG | + | chr2_2:23694153-23694172 | None:intergenic | 35.0% | |
CTAAGAACATTGTCTCTGAA+AGG | - | chr2_2:23694350-23694369 | Msa0244890:intron | 35.0% | |
! | ACATTGTCTCTGAAAGGAAT+AGG | - | chr2_2:23694356-23694375 | Msa0244890:intron | 35.0% |
! | GTCGCAAAATCCTGTATTTT+AGG | + | chr2_2:23694757-23694776 | None:intergenic | 35.0% |
TCGAAAGGGAATAGCAAAAT+CGG | + | chr2_2:23695026-23695045 | None:intergenic | 35.0% | |
TAACCTAGGTTGTCAAAATC+GGG | + | chr2_2:23695062-23695081 | None:intergenic | 35.0% | |
CTAACCTAGGTTGTCAAAAT+CGG | + | chr2_2:23695063-23695082 | None:intergenic | 35.0% | |
!! | GAGATAATGGAACTTGAATC+TGG | - | chr2_2:23695291-23695310 | Msa0244890:intron | 35.0% |
TTTACCTCAAGGACTTCAAT+TGG | + | chr2_2:23695432-23695451 | None:intergenic | 35.0% | |
TTGAAGTCCTTGAGGTAAAT+TGG | - | chr2_2:23695433-23695452 | Msa0244890:intron | 35.0% | |
!!! | AACGTTCATTTTGAAACGGA+GGG | + | chr2_2:23695649-23695668 | None:intergenic | 35.0% |
CTATATTTATTGTTGGGGGT+TGG | + | chr2_2:23696562-23696581 | None:intergenic | 35.0% | |
GCATCAATAATACAAGAGAG+AGG | + | chr2_2:23696611-23696630 | None:intergenic | 35.0% | |
ATACATGGGAGAGAATACAA+TGG | - | chr2_2:23696746-23696765 | Msa0244890:intron | 35.0% | |
TGAGCTTGACATGTAACAAA+AGG | - | chr2_2:23696772-23696791 | Msa0244890:intron | 35.0% | |
GAGCTTGACATGTAACAAAA+GGG | - | chr2_2:23696773-23696792 | Msa0244890:intron | 35.0% | |
TTTGAAGACAGTCTTCATTG+AGG | - | chr2_2:23696884-23696903 | Msa0244890:intron | 35.0% | |
TGCATTGTTATATGTAGGGT+CGG | - | chr2_2:23697343-23697362 | Msa0244890:intron | 35.0% | |
!!! | CTATTGATTTTGAAGCATGG+AGG | + | chr2_2:23697577-23697596 | None:intergenic | 35.0% |
!!! | GGTCTATTGATTTTGAAGCA+TGG | + | chr2_2:23697580-23697599 | None:intergenic | 35.0% |
! | ACTTTTGTAAAAGTGGTGAG+CGG | + | chr2_2:23697602-23697621 | None:intergenic | 35.0% |
TACCACGTGTGTAATAAGAT+TGG | - | chr2_2:23697711-23697730 | Msa0244890:intron | 35.0% | |
TACCAATCTTATTACACACG+TGG | + | chr2_2:23697716-23697735 | None:intergenic | 35.0% | |
CGTGTGTAATAAGATTGGTA+TGG | - | chr2_2:23697716-23697735 | Msa0244890:intron | 35.0% | |
CTCTCTTTCTCCAACAAATT+CGG | - | chr2_2:23698002-23698021 | Msa0244890:intron | 35.0% | |
TACCAAAACGACACTTGAAT+AGG | - | chr2_2:23698346-23698365 | Msa0244890:intron | 35.0% | |
!!! | TTCCTATTCAAGTGTCGTTT+TGG | + | chr2_2:23698351-23698370 | None:intergenic | 35.0% |
CCCTAAAACGACACTTAAAA+AGG | - | chr2_2:23698382-23698401 | Msa0244890:intron | 35.0% | |
!! | TTAGGGAGAGTGTATTCTTT+TGG | - | chr2_2:23698491-23698510 | Msa0244890:intron | 35.0% |
TCTCTATTCTATGCTTGAGA+GGG | + | chr2_2:23698580-23698599 | None:intergenic | 35.0% | |
ATCTCTATTCTATGCTTGAG+AGG | + | chr2_2:23698581-23698600 | None:intergenic | 35.0% | |
ATCAAAGTAGAAAAGAGTGG+AGG | - | chr2_2:23698654-23698673 | Msa0244890:intron | 35.0% | |
TCAAAGTAGAAAAGAGTGGA+GGG | - | chr2_2:23698655-23698674 | Msa0244890:intron | 35.0% | |
CCTAATTCATGTATCACTAG+TGG | + | chr2_2:23698699-23698718 | None:intergenic | 35.0% | |
CCACTAGTGATACATGAATT+AGG | - | chr2_2:23698696-23698715 | Msa0244890:intron | 35.0% | |
!! | GGTTAACTTGTATCATGAGA+CGG | - | chr2_2:23698718-23698737 | Msa0244890:intron | 35.0% |
!! | GTTAACTTGTATCATGAGAC+GGG | - | chr2_2:23698719-23698738 | Msa0244890:intron | 35.0% |
AAAAATTAAACCACGCGGTA+AGG | + | chr2_2:23698824-23698843 | None:intergenic | 35.0% | |
!! | TGACAAGGATTTTGCCATTT+TGG | + | chr2_2:23698981-23699000 | None:intergenic | 35.0% |
ATATACACGCAGATATGACA+AGG | + | chr2_2:23698996-23699015 | None:intergenic | 35.0% | |
!! | AAATGTTAACTTGTGCCCTT+GGG | + | chr2_2:23699307-23699326 | None:intergenic | 35.0% |
TTCAAAGCTCATCAGAGTTA+GGG | - | chr2_2:23699388-23699407 | Msa0244890:intron | 35.0% | |
! | GGTGAAGAATCTTTTCTTTG+TGG | + | chr2_2:23699646-23699665 | None:intergenic | 35.0% |
ATAAGTGTTCCACTCATTGT+GGG | + | chr2_2:23700925-23700944 | None:intergenic | 35.0% | |
AATAAGTGTTCCACTCATTG+TGG | + | chr2_2:23700926-23700945 | None:intergenic | 35.0% | |
GTGTTGGAGAGATAGATTTA+CGG | + | chr2_2:23701337-23701356 | None:intergenic | 35.0% | |
TGCACAAAATCTGTCAGTAA+TGG | - | chr2_2:23701572-23701591 | Msa0244890:intron | 35.0% | |
!! | GTCAGTAATGGATATTACTG+AGG | - | chr2_2:23701584-23701603 | Msa0244890:intron | 35.0% |
AATGGATATTACTGAGGGAT+TGG | - | chr2_2:23701590-23701609 | Msa0244890:intron | 35.0% | |
ACTGATGTCAGTATTACTGA+GGG | + | chr2_2:23701619-23701638 | None:intergenic | 35.0% | |
TACTGATGTCAGTATTACTG+AGG | + | chr2_2:23701620-23701639 | None:intergenic | 35.0% | |
ACTGACATCAGTATTGTTAC+TGG | - | chr2_2:23701627-23701646 | Msa0244890:intron | 35.0% | |
TATTCCCTCAGTAATTACTG+GGG | - | chr2_2:23701705-23701724 | Msa0244890:intron | 35.0% | |
CTCACGTTGGACATAATTAA+CGG | + | chr2_2:23702243-23702262 | None:intergenic | 35.0% | |
CACGTGAATGAGCAATAAAA+GGG | - | chr2_2:23702342-23702361 | Msa0244890:intron | 35.0% | |
CTATGAAAATACGAAAGCCA+CGG | + | chr2_2:23702449-23702468 | None:intergenic | 35.0% | |
GTGATGAGTACAAGCTTTAC+TGG | - | chr2_2:23694104-23694123 | Msa0244890:three_prime_UTR | 40.0% | |
!!! | GATTGGATGAGGCTTTTTCA+GGG | - | chr2_2:23694278-23694297 | Msa0244890:intron | 40.0% |
! | TTGTCTCTGAAAGGAATAGG+AGG | - | chr2_2:23694359-23694378 | Msa0244890:intron | 40.0% |
CGAAAGGGAATAGCAAAATC+GGG | + | chr2_2:23695025-23695044 | None:intergenic | 40.0% | |
GACTTTACTTCAGGTCGAAA+GGG | + | chr2_2:23695040-23695059 | None:intergenic | 40.0% | |
CAAAATCGGGACTTTACTTC+AGG | + | chr2_2:23695049-23695068 | None:intergenic | 40.0% | |
ATCAATCGAACGTCTAACCT+AGG | + | chr2_2:23695076-23695095 | None:intergenic | 40.0% | |
CTGATCTGTTCTCTTCTTCT+TGG | + | chr2_2:23695379-23695398 | None:intergenic | 40.0% | |
CTTTCCAATTGAAGTCCTTG+AGG | - | chr2_2:23695425-23695444 | Msa0244890:intron | 40.0% | |
GAGATGATGATAGAGACAGT+GGG | + | chr2_2:23695459-23695478 | None:intergenic | 40.0% | |
AGAGATGATGATAGAGACAG+TGG | + | chr2_2:23695460-23695479 | None:intergenic | 40.0% | |
ATCACTGAGCTCACAACTTA+TGG | - | chr2_2:23695525-23695544 | Msa0244890:intron | 40.0% | |
CCAAGTTATGTGTGAGTCAA+TGG | + | chr2_2:23695552-23695571 | None:intergenic | 40.0% | |
!! | CCATTGACTCACACATAACT+TGG | - | chr2_2:23695549-23695568 | Msa0244890:intron | 40.0% |
!!! | TTCATTTTGAAACGGAGGGA+TGG | + | chr2_2:23695645-23695664 | None:intergenic | 40.0% |
!!! | CAACGTTCATTTTGAAACGG+AGG | + | chr2_2:23695650-23695669 | None:intergenic | 40.0% |
AATGGTAGCCCTTATTAAGG+TGG | + | chr2_2:23696424-23696443 | None:intergenic | 40.0% | |
TATATGGTTGAGTGCAGCTT+AGG | - | chr2_2:23696718-23696737 | Msa0244890:intron | 40.0% | |
ATATGGTTGAGTGCAGCTTA+GGG | - | chr2_2:23696719-23696738 | Msa0244890:intron | 40.0% | |
CAGCTTAGGGTTACATACAT+GGG | - | chr2_2:23696732-23696751 | Msa0244890:intron | 40.0% | |
TAACAAAAGGGCAGACACAA+TGG | - | chr2_2:23696785-23696804 | Msa0244890:intron | 40.0% | |
GCATTGTTATATGTAGGGTC+GGG | - | chr2_2:23697344-23697363 | Msa0244890:intron | 40.0% | |
CATTGTTATATGTAGGGTCG+GGG | - | chr2_2:23697345-23697364 | Msa0244890:intron | 40.0% | |
! | CTTTTGTAAAAGTGGTGAGC+GGG | + | chr2_2:23697601-23697620 | None:intergenic | 40.0% |
!! | GCTCACCACTTTTACAAAAG+TGG | - | chr2_2:23697601-23697620 | Msa0244890:intron | 40.0% |
GGTACTTAACTCGAATGTTC+TGG | + | chr2_2:23697695-23697714 | None:intergenic | 40.0% | |
GACACTTAAAAAGGAACGGA+GGG | + | chr2_2:23698391-23698410 | None:intergenic | 40.0% | |
GACACTTAAAAAGGAACGGA+TGG | - | chr2_2:23698391-23698410 | Msa0244890:intron | 40.0% | |
!!! | GGATTTTGCCATTTTGGTGT+GGG | + | chr2_2:23698975-23698994 | None:intergenic | 40.0% |
!!! | AGGATTTTGCCATTTTGGTG+TGG | + | chr2_2:23698976-23698995 | None:intergenic | 40.0% |
!! | TCATGTTAACTTGTGCCCTT+AGG | - | chr2_2:23699149-23699168 | Msa0244890:intron | 40.0% |
!! | CATGTTAACTTGTGCCCTTA+GGG | - | chr2_2:23699150-23699169 | Msa0244890:intron | 40.0% |
!! | TTCCTTAACTTGTGCCCTAA+GGG | + | chr2_2:23699167-23699186 | None:intergenic | 40.0% |
TTCCTTAACTTATGCCCCAA+GGG | - | chr2_2:23699289-23699308 | Msa0244890:intron | 40.0% | |
!! | AATGTTAACTTGTGCCCTTG+GGG | + | chr2_2:23699306-23699325 | None:intergenic | 40.0% |
!! | GAAATGTTAACTTGTGCCCT+TGG | + | chr2_2:23699308-23699327 | None:intergenic | 40.0% |
CTTCAAAGCTCATCAGAGTT+AGG | - | chr2_2:23699387-23699406 | Msa0244890:intron | 40.0% | |
! | CAGAGTTAGGGTTGATTTCA+AGG | - | chr2_2:23699400-23699419 | Msa0244890:intron | 40.0% |
AAAGCTGAAGGTCGTTATCA+AGG | + | chr2_2:23699667-23699686 | None:intergenic | 40.0% | |
TTTATGGGCAAGTTTCCATG+AGG | - | chr2_2:23700022-23700041 | Msa0244890:intron | 40.0% | |
TTGATATGTCCCACAATGAG+TGG | - | chr2_2:23700913-23700932 | Msa0244890:intron | 40.0% | |
TCAAGTAACCCTATTGTGGA+TGG | - | chr2_2:23701484-23701503 | Msa0244890:intron | 40.0% | |
TGCTAAGACCATCCACAATA+GGG | + | chr2_2:23701495-23701514 | None:intergenic | 40.0% | |
ATGCTAAGACCATCCACAAT+AGG | + | chr2_2:23701496-23701515 | None:intergenic | 40.0% | |
TTGTGCATTACTGAGTCTCA+AGG | + | chr2_2:23701559-23701578 | None:intergenic | 40.0% | |
GACATCAGTATTGTTACTGG+CGG | - | chr2_2:23701630-23701649 | Msa0244890:intron | 40.0% | |
! | GCGGAATTTTCCCTCAATAA+CGG | - | chr2_2:23701649-23701668 | Msa0244890:intron | 40.0% |
!! | ATTTTCCCTCAATAACGGAG+AGG | - | chr2_2:23701654-23701673 | Msa0244890:intron | 40.0% |
AACTACCTCTCCGTTATTGA+GGG | + | chr2_2:23701662-23701681 | None:intergenic | 40.0% | |
TAACTACCTCTCCGTTATTG+AGG | + | chr2_2:23701663-23701682 | None:intergenic | 40.0% | |
ATTCCCTCAGTAATTACTGG+GGG | - | chr2_2:23701706-23701725 | Msa0244890:intron | 40.0% | |
CCCTTCATTAGATGCTCATA+GGG | + | chr2_2:23702186-23702205 | None:intergenic | 40.0% | |
CCCTATGAGCATCTAATGAA+GGG | - | chr2_2:23702183-23702202 | Msa0244890:CDS | 40.0% | |
TCCCTTCATTAGATGCTCAT+AGG | + | chr2_2:23702187-23702206 | None:intergenic | 40.0% | |
GAACATGAGTTAACTCACGT+TGG | + | chr2_2:23702256-23702275 | None:intergenic | 40.0% | |
GCACGTGAATGAGCAATAAA+AGG | - | chr2_2:23702341-23702360 | Msa0244890:intron | 40.0% | |
CTCATCACCAATGTTCTCCA+TGG | + | chr2_2:23694092-23694111 | None:intergenic | 45.0% | |
TTGGGTTTGGAGGAACATGT+TGG | + | chr2_2:23694134-23694153 | None:intergenic | 45.0% | |
TATCAAGCTCTTGGGTTTGG+AGG | + | chr2_2:23694144-23694163 | None:intergenic | 45.0% | |
TCCAAACCCAAGAGCTTGAT+AGG | - | chr2_2:23694143-23694162 | Msa0244890:three_prime_UTR | 45.0% | |
ACCTATCAAGCTCTTGGGTT+TGG | + | chr2_2:23694147-23694166 | None:intergenic | 45.0% | |
TATATGGTTGTGGTTGCAGC+TGG | - | chr2_2:23694254-23694273 | Msa0244890:intron | 45.0% | |
ATATGGTTGTGGTTGCAGCT+GGG | - | chr2_2:23694255-23694274 | Msa0244890:intron | 45.0% | |
!! | GGATTGGATGAGGCTTTTTC+AGG | - | chr2_2:23694277-23694296 | Msa0244890:intron | 45.0% |
TATGATTCAAGCTCCCCAGA+TGG | - | chr2_2:23694304-23694323 | Msa0244890:intron | 45.0% | |
ACTCTTTGCACTTAGAGCAG+TGG | - | chr2_2:23694399-23694418 | Msa0244890:CDS | 45.0% | |
AGTGGTCCCAAACATTAGCA+AGG | - | chr2_2:23694417-23694436 | Msa0244890:CDS | 45.0% | |
GGACTTTACTTCAGGTCGAA+AGG | + | chr2_2:23695041-23695060 | None:intergenic | 45.0% | |
!! | AGTCCCGATTTTGACAACCT+AGG | - | chr2_2:23695056-23695075 | Msa0244890:intron | 45.0% |
! | AAGAGCTTCCTGTGTTGCTA+AGG | - | chr2_2:23695352-23695371 | Msa0244890:intron | 45.0% |
TTCTTGGACCTTAGCAACAC+AGG | + | chr2_2:23695363-23695382 | None:intergenic | 45.0% | |
GGCAATGGTAGCCCTTATTA+AGG | + | chr2_2:23696427-23696446 | None:intergenic | 45.0% | |
! | TTCTCTACTAGGGTACCTGA+TGG | + | chr2_2:23696453-23696472 | None:intergenic | 45.0% |
GCAGCTTAGGGTTACATACA+TGG | - | chr2_2:23696731-23696750 | Msa0244890:intron | 45.0% | |
! | GCCAACATCACCTCTTTTTC+AGG | - | chr2_2:23696855-23696874 | Msa0244890:intron | 45.0% |
GCCTGAAAAAGAGGTGATGT+TGG | + | chr2_2:23696859-23696878 | None:intergenic | 45.0% | |
!!! | ACATCACCTCTTTTTCAGGC+AGG | - | chr2_2:23696859-23696878 | Msa0244890:intron | 45.0% |
CAAAAGCCTGCCTGAAAAAG+AGG | + | chr2_2:23696868-23696887 | None:intergenic | 45.0% | |
! | ATGAATAAGTGGGGTGTCTG+TGG | + | chr2_2:23697155-23697174 | None:intergenic | 45.0% |
TGTGAGCATAGCTCAGTTGA+CGG | - | chr2_2:23697315-23697334 | Msa0244890:intron | 45.0% | |
CGACACTTAAAAAGGAACGG+AGG | + | chr2_2:23698390-23698409 | None:intergenic | 45.0% | |
ATGTGAGAAAGGAGTGGCTT+TGG | + | chr2_2:23698950-23698969 | None:intergenic | 45.0% | |
TCACATCACCCACACCAAAA+TGG | - | chr2_2:23698964-23698983 | Msa0244890:intron | 45.0% | |
!!! | TAGTGTTTTGGGGCTCGTTA+GGG | - | chr2_2:23699048-23699067 | Msa0244890:intron | 45.0% |
!! | GTTCCTTAACTTGTGCCCTA+AGG | + | chr2_2:23699168-23699187 | None:intergenic | 45.0% |
GTTCCTTAACTTATGCCCCA+AGG | - | chr2_2:23699288-23699307 | Msa0244890:intron | 45.0% | |
!! | TGAGAGTGCTCTCAAAGCAT+TGG | + | chr2_2:23699603-23699622 | None:intergenic | 45.0% |
! | CCAACTGATTTACACTCACG+TGG | + | chr2_2:23701126-23701145 | None:intergenic | 45.0% |
CCACGTGAGTGTAAATCAGT+TGG | - | chr2_2:23701123-23701142 | Msa0244890:intron | 45.0% | |
GTGAGTGTAAATCAGTTGGC+AGG | - | chr2_2:23701127-23701146 | Msa0244890:CDS | 45.0% | |
! | AGGTGAATAACTAGGGTGTC+TGG | + | chr2_2:23701190-23701209 | None:intergenic | 45.0% |
GAGGTCAAGTAACCCTATTG+TGG | - | chr2_2:23701480-23701499 | Msa0244890:intron | 45.0% | |
GTTCCCCCAGTAATTACTGA+GGG | + | chr2_2:23701712-23701731 | None:intergenic | 45.0% | |
TGTTCCCCCAGTAATTACTG+AGG | + | chr2_2:23701713-23701732 | None:intergenic | 45.0% | |
AGGGTCATTAAGAGCTGCAA+TGG | + | chr2_2:23702158-23702177 | None:intergenic | 45.0% | |
AGATGCTCATAGGGCTTAGA+GGG | + | chr2_2:23702177-23702196 | None:intergenic | 45.0% | |
TAGATGCTCATAGGGCTTAG+AGG | + | chr2_2:23702178-23702197 | None:intergenic | 45.0% | |
GCCCTATGAGCATCTAATGA+AGG | - | chr2_2:23702182-23702201 | Msa0244890:CDS | 45.0% | |
TAGCGTGAGTTAACTCACGT+AGG | - | chr2_2:23702319-23702338 | Msa0244890:intron | 45.0% | |
AGTATAGGATTGAGGAACCG+TGG | - | chr2_2:23702429-23702448 | Msa0244890:CDS | 45.0% | |
!! | AATTACTAATAAATAATTAA+TGG | + | chr2_2:23694466-23694485 | None:intergenic | 5.0% |
!!! | TATTTATATTTTATTATAGA+CGG | - | chr2_2:23694641-23694660 | Msa0244890:intron | 5.0% |
!!! | ATATTTAGTATTAATTTTTT+TGG | - | chr2_2:23694904-23694923 | Msa0244890:intron | 5.0% |
!!! | TATTTAGTATTAATTTTTTT+GGG | - | chr2_2:23694905-23694924 | Msa0244890:intron | 5.0% |
!! | TTAAATAAAAAATAATACTT+TGG | - | chr2_2:23695768-23695787 | Msa0244890:intron | 5.0% |
!!! | TTTTTTTTTTTTTTTTAAGA+TGG | + | chr2_2:23696057-23696076 | None:intergenic | 5.0% |
!!! | AATATATATTTTTAATAAAG+AGG | + | chr2_2:23696972-23696991 | None:intergenic | 5.0% |
!!! | GATAATTTTTAAAATAAAAT+TGG | + | chr2_2:23697488-23697507 | None:intergenic | 5.0% |
!!! | ATTTTATTTTAAAAATTATC+AGG | - | chr2_2:23697488-23697507 | Msa0244890:intron | 5.0% |
!! | ACAATAATTTAATAATATTT+AGG | - | chr2_2:23698473-23698492 | Msa0244890:intron | 5.0% |
!! | CAATAATTTAATAATATTTA+GGG | - | chr2_2:23698474-23698493 | Msa0244890:intron | 5.0% |
!! | TCAATTAAATTTAATATTTA+AGG | + | chr2_2:23700396-23700415 | None:intergenic | 5.0% |
!!! | ATTTTTTTAATTCAAAATTA+GGG | - | chr2_2:23701976-23701995 | Msa0244890:intron | 5.0% |
TATGGTTGTGGTTGCAGCTG+GGG | - | chr2_2:23694256-23694275 | Msa0244890:intron | 50.0% | |
! | TGATGATGCTGCACCATCTG+GGG | + | chr2_2:23694320-23694339 | None:intergenic | 50.0% |
! | CTGATGATGCTGCACCATCT+GGG | + | chr2_2:23694321-23694340 | None:intergenic | 50.0% |
CAGTGGGCCAATTTACCTCA+AGG | + | chr2_2:23695443-23695462 | None:intergenic | 50.0% | |
! | TACTAGGGTACCTGATGGTG+TGG | + | chr2_2:23696448-23696467 | None:intergenic | 50.0% |
TAAACCACGCGGTAAGGTCT+TGG | + | chr2_2:23698818-23698837 | None:intergenic | 50.0% | |
!! | AAAGGAGTGGCTTTGGTGGA+AGG | + | chr2_2:23698943-23698962 | None:intergenic | 50.0% |
!! | TGAGAAAGGAGTGGCTTTGG+TGG | + | chr2_2:23698947-23698966 | None:intergenic | 50.0% |
TGGGTGATGTGAGAAAGGAG+TGG | + | chr2_2:23698956-23698975 | None:intergenic | 50.0% | |
TGGTGTGGGTGATGTGAGAA+AGG | + | chr2_2:23698961-23698980 | None:intergenic | 50.0% | |
!!! | GTAGTGTTTTGGGGCTCGTT+AGG | - | chr2_2:23699047-23699066 | Msa0244890:intron | 50.0% |
TGCCCTTAGGGCACAAGTTA+AGG | - | chr2_2:23699162-23699181 | Msa0244890:intron | 50.0% | |
TGCCCTTGGGGCATAAGTTA+AGG | + | chr2_2:23699294-23699313 | None:intergenic | 50.0% | |
TTGTGGTTGCAGCTGGGGAT+TGG | - | chr2_2:23694261-23694280 | Msa0244890:intron | 55.0% | |
TTGCAGCTGGGGATTGGATG+AGG | - | chr2_2:23694267-23694286 | Msa0244890:intron | 55.0% | |
! | CCTGATGATGCTGCACCATC+TGG | + | chr2_2:23694322-23694341 | None:intergenic | 55.0% |
CCAGATGGTGCAGCATCATC+AGG | - | chr2_2:23694319-23694338 | Msa0244890:intron | 55.0% | |
GCTACCATTGCCACACCATC+AGG | - | chr2_2:23696435-23696454 | Msa0244890:intron | 55.0% | |
! | GGTACCTGATGGTGTGGCAA+TGG | + | chr2_2:23696442-23696461 | None:intergenic | 55.0% |
ATGACCAAGACCTTACCGCG+TGG | - | chr2_2:23698811-23698830 | Msa0244890:intron | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_2 | gene | 23693956 | 23702617 | 23693956 | ID=Msa0244890;Name=Msa0244890 |
chr2_2 | mRNA | 23693956 | 23702617 | 23693956 | ID=Msa0244890-mRNA-1;Parent=Msa0244890;Name=Msa0244890-mRNA-1;_AED=0.15;_eAED=0.15;_QI=135|1|1|1|0.8|0.66|6|234|244 |
chr2_2 | exon | 23693956 | 23694184 | 23693956 | ID=Msa0244890-mRNA-1:exon:9117;Parent=Msa0244890-mRNA-1 |
chr2_2 | exon | 23694370 | 23694464 | 23694370 | ID=Msa0244890-mRNA-1:exon:9116;Parent=Msa0244890-mRNA-1 |
chr2_2 | exon | 23699668 | 23699838 | 23699668 | ID=Msa0244890-mRNA-1:exon:9115;Parent=Msa0244890-mRNA-1 |
chr2_2 | exon | 23701127 | 23701360 | 23701127 | ID=Msa0244890-mRNA-1:exon:9114;Parent=Msa0244890-mRNA-1 |
chr2_2 | exon | 23702135 | 23702300 | 23702135 | ID=Msa0244890-mRNA-1:exon:9113;Parent=Msa0244890-mRNA-1 |
chr2_2 | exon | 23702409 | 23702617 | 23702409 | ID=Msa0244890-mRNA-1:exon:9112;Parent=Msa0244890-mRNA-1 |
chr2_2 | five_prime_UTR | 23702483 | 23702617 | 23702483 | ID=Msa0244890-mRNA-1:five_prime_utr;Parent=Msa0244890-mRNA-1 |
chr2_2 | CDS | 23702409 | 23702482 | 23702409 | ID=Msa0244890-mRNA-1:cds;Parent=Msa0244890-mRNA-1 |
chr2_2 | CDS | 23702135 | 23702300 | 23702135 | ID=Msa0244890-mRNA-1:cds;Parent=Msa0244890-mRNA-1 |
chr2_2 | CDS | 23701127 | 23701360 | 23701127 | ID=Msa0244890-mRNA-1:cds;Parent=Msa0244890-mRNA-1 |
chr2_2 | CDS | 23699668 | 23699838 | 23699668 | ID=Msa0244890-mRNA-1:cds;Parent=Msa0244890-mRNA-1 |
chr2_2 | CDS | 23694375 | 23694464 | 23694375 | ID=Msa0244890-mRNA-1:cds;Parent=Msa0244890-mRNA-1 |
chr2_2 | three_prime_UTR | 23694370 | 23694374 | 23694370 | ID=Msa0244890-mRNA-1:three_prime_utr;Parent=Msa0244890-mRNA-1 |
chr2_2 | three_prime_UTR | 23693956 | 23694184 | 23693956 | ID=Msa0244890-mRNA-1:three_prime_utr;Parent=Msa0244890-mRNA-1 |
Gene Sequence |
Protein sequence |