Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0274650 | XP_013462585.1 | 98.667 | 525 | 6 | 1 | 1 | 525 | 1 | 524 | 0.0 | 1053 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0274650 | sp|Q94C70|NAT2_ARATH | 81.714 | 525 | 95 | 1 | 1 | 525 | 1 | 524 | 0.0 | 897 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006840 | Msa0274650 | 0.813977 | 1.947462e-51 | -8.615850e-47 |
| Msa0050530 | Msa0274650 | 0.811470 | 6.889868e-51 | -8.615850e-47 |
| Msa0069350 | Msa0274650 | 0.800578 | 1.349307e-48 | -8.615850e-47 |
| Msa0084990 | Msa0274650 | 0.821744 | 3.431339e-53 | -8.615850e-47 |
| Msa0100890 | Msa0274650 | 0.813152 | 2.958581e-51 | -8.615850e-47 |
| Msa0177830 | Msa0274650 | 0.825735 | 3.985219e-54 | -8.615850e-47 |
| Msa0177970 | Msa0274650 | 0.824492 | 7.837965e-54 | -8.615850e-47 |
| Msa0184700 | Msa0274650 | 0.803851 | 2.861575e-49 | -8.615850e-47 |
| Msa0191570 | Msa0274650 | 0.817893 | 2.603433e-52 | -8.615850e-47 |
| Msa0193720 | Msa0274650 | 0.818816 | 1.609299e-52 | -8.615850e-47 |
| Msa0204970 | Msa0274650 | 0.800680 | 1.286436e-48 | -8.615850e-47 |
| Msa0214210 | Msa0274650 | 0.800196 | 1.614653e-48 | -8.615850e-47 |
| Msa0235500 | Msa0274650 | 0.826728 | 2.313941e-54 | -8.615850e-47 |
| Msa0241040 | Msa0274650 | 0.823934 | 1.059977e-53 | -8.615850e-47 |
| Msa0249870 | Msa0274650 | 0.803501 | 3.382988e-49 | -8.615850e-47 |
| Msa0254540 | Msa0274650 | 0.800058 | 1.721717e-48 | -8.615850e-47 |
| Msa0274650 | Msa0278840 | 0.843641 | 1.236922e-58 | -8.615850e-47 |
| Msa0274650 | Msa0281540 | 0.806313 | 8.741233e-50 | -8.615850e-47 |
| Msa0274650 | Msa0312250 | 0.805848 | 1.095144e-49 | -8.615850e-47 |
| Msa0274650 | Msa0314080 | 0.889709 | 1.900081e-73 | -8.615850e-47 |
| Msa0274650 | Msa0318620 | 0.806451 | 8.174357e-50 | -8.615850e-47 |
| Msa0274650 | Msa0332280 | 0.804747 | 1.862009e-49 | -8.615850e-47 |
| Msa0274650 | Msa0420430 | 0.824748 | 6.821343e-54 | -8.615850e-47 |
| Msa0274650 | Msa0466520 | 0.808326 | 3.272961e-50 | -8.615850e-47 |
| Msa0274650 | Msa0541740 | 0.818379 | 2.020915e-52 | -8.615850e-47 |
| Msa0274650 | Msa0557850 | 0.819026 | 1.441811e-52 | -8.615850e-47 |
| Msa0274650 | Msa0562360 | 0.817040 | 4.053395e-52 | -8.615850e-47 |
| Msa0274650 | Msa0571350 | 0.814645 | 1.386666e-51 | -8.615850e-47 |
| Msa0274650 | Msa0575710 | 0.817273 | 3.591446e-52 | -8.615850e-47 |
| Msa0274650 | Msa0612520 | 0.827981 | 1.158345e-54 | -8.615850e-47 |
| Msa0274650 | Msa0616230 | 0.836596 | 8.531175e-57 | -8.615850e-47 |
| Msa0274650 | Msa0647440 | 0.806812 | 6.859288e-50 | -8.615850e-47 |
| Msa0274650 | Msa0653160 | 0.848543 | 5.732249e-60 | -8.615850e-47 |
| Msa0274650 | Msa0655710 | 0.829703 | 4.438525e-55 | -8.615850e-47 |
| Msa0274650 | Msa0657210 | 0.804766 | 1.845175e-49 | -8.615850e-47 |
| Msa0274650 | Msa0660090 | 0.800545 | 1.370583e-48 | -8.615850e-47 |
| Msa0274650 | Msa0660260 | 0.801979 | 6.971930e-49 | -8.615850e-47 |
| Msa0274650 | Msa0688620 | 0.822642 | 2.123490e-53 | -8.615850e-47 |
| Msa0274650 | Msa0690320 | 0.812695 | 3.724650e-51 | -8.615850e-47 |
| Msa0274650 | Msa0695560 | 0.837481 | 5.067019e-57 | -8.615850e-47 |
| Msa0274650 | Msa0699560 | 0.832359 | 9.886411e-56 | -8.615850e-47 |
| Msa0274650 | Msa0701250 | 0.812569 | 3.968908e-51 | -8.615850e-47 |
| Msa0274650 | Msa0749190 | 0.823540 | 1.311172e-53 | -8.615850e-47 |
| Msa0274650 | Msa0750520 | 0.825347 | 4.926240e-54 | -8.615850e-47 |
| Msa0274650 | Msa0900090 | 0.806726 | 7.151129e-50 | -8.615850e-47 |
| Msa0274650 | Msa0965470 | 0.823481 | 1.353113e-53 | -8.615850e-47 |
| Msa0274650 | Msa0978980 | 0.800701 | 1.273673e-48 | -8.615850e-47 |
| Msa0274650 | Msa1033420 | 0.826463 | 2.675118e-54 | -8.615850e-47 |
| Msa0274650 | Msa1046120 | 0.811790 | 5.869801e-51 | -8.615850e-47 |
| Msa0274650 | Msa1071410 | 0.823247 | 1.535073e-53 | -8.615850e-47 |
| Msa0274650 | Msa1073060 | 0.825229 | 5.252623e-54 | -8.615850e-47 |
| Msa0274650 | Msa1091050 | 0.816700 | 4.831100e-52 | -8.615850e-47 |
| Msa0274650 | Msa1106220 | 0.813431 | 2.568928e-51 | -8.615850e-47 |
| Msa0274650 | Msa1124470 | 0.806615 | 7.546778e-50 | -8.615850e-47 |
| Msa0274650 | Msa1130780 | 0.802520 | 5.395028e-49 | -8.615850e-47 |
| Msa0274650 | Msa1133970 | 0.814787 | 1.289811e-51 | -8.615850e-47 |
| Msa0274650 | Msa1134040 | 0.816991 | 4.156738e-52 | -8.615850e-47 |
| Msa0274650 | Msa1138800 | 0.801869 | 7.347099e-49 | -8.615850e-47 |
| Msa0274650 | Msa1144990 | 0.845018 | 5.273597e-59 | -8.615850e-47 |
| Msa0274650 | Msa1183900 | 0.808179 | 3.516366e-50 | -8.615850e-47 |
| Msa0274650 | Msa1212920 | 0.819720 | 1.001669e-52 | -8.615850e-47 |
| Msa0274650 | Msa1267930 | 0.812854 | 3.437883e-51 | -8.615850e-47 |
| Msa0274650 | Msa1299980 | 0.817050 | 4.030603e-52 | -8.615850e-47 |
| Msa0274650 | Msa1308860 | 0.828627 | 8.091959e-55 | -8.615850e-47 |
| Msa0274650 | Msa1331650 | 0.830789 | 2.409599e-55 | -8.615850e-47 |
| Msa0274650 | Msa1342810 | 0.837788 | 4.228237e-57 | -8.615850e-47 |
| Msa0274650 | Msa1368170 | 0.823375 | 1.432920e-53 | -8.615850e-47 |
| Msa0274650 | Msa1381800 | 0.820638 | 6.170789e-53 | -8.615850e-47 |
| Msa0274650 | Msa1385570 | 0.812532 | 4.043059e-51 | -8.615850e-47 |
| Msa0274650 | Msa1389310 | 0.826969 | 2.026606e-54 | -8.615850e-47 |
| Msa0274650 | Msa1389820 | 0.809056 | 2.284389e-50 | -8.615850e-47 |
| Msa0274650 | Msa1406720 | 0.805472 | 1.312831e-49 | -8.615850e-47 |
| Msa0274650 | Msa1417930 | 0.815170 | 1.060163e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0274650 | MtrunA17_Chr2g0284061 | 98.667 | 525 | 6 | 1 | 1 | 525 | 1 | 524 | 0.0 | 1053 |
| Msa0274650 | MtrunA17_Chr8g0379171 | 83.429 | 525 | 86 | 1 | 1 | 525 | 1 | 524 | 0.0 | 913 |
| Msa0274650 | MtrunA17_Chr3g0119521 | 69.515 | 515 | 156 | 1 | 12 | 525 | 6 | 520 | 0.0 | 761 |
| Msa0274650 | MtrunA17_Chr8g0364611 | 59.962 | 522 | 207 | 1 | 4 | 523 | 10 | 531 | 0.0 | 651 |
| Msa0274650 | MtrunA17_Chr3g0117941 | 58.349 | 521 | 215 | 1 | 5 | 523 | 10 | 530 | 0.0 | 627 |
| Msa0274650 | MtrunA17_Chr4g0059331 | 58.126 | 523 | 217 | 1 | 3 | 523 | 8 | 530 | 0.0 | 621 |
| Msa0274650 | MtrunA17_Chr5g0414131 | 56.405 | 523 | 225 | 2 | 4 | 523 | 14 | 536 | 0.0 | 597 |
| Msa0274650 | MtrunA17_Chr1g0154001 | 54.706 | 510 | 231 | 0 | 14 | 523 | 36 | 545 | 0.0 | 582 |
| Msa0274650 | MtrunA17_Chr1g0207021 | 54.459 | 527 | 233 | 4 | 2 | 525 | 5 | 527 | 0.0 | 570 |
| Msa0274650 | MtrunA17_Chr3g0134911 | 48.208 | 558 | 242 | 5 | 5 | 523 | 34 | 583 | 0.0 | 545 |
| Msa0274650 | MtrunA17_Chr5g0405471 | 51.321 | 530 | 236 | 5 | 12 | 523 | 35 | 560 | 0.0 | 538 |
| Msa0274650 | MtrunA17_Chr8g0367361 | 34.901 | 553 | 320 | 6 | 2 | 522 | 224 | 768 | 1.37e-109 | 343 |
| Msa0274650 | MtrunA17_Chr5g0412181 | 35.551 | 526 | 303 | 5 | 25 | 518 | 172 | 693 | 2.46e-104 | 328 |
| Msa0274650 | MtrunA17_Chr2g0320981 | 35.448 | 536 | 308 | 5 | 21 | 522 | 147 | 678 | 1.60e-103 | 325 |
| Msa0274650 | MtrunA17_Chr4g0027121 | 35.261 | 536 | 310 | 6 | 21 | 522 | 154 | 686 | 8.97e-100 | 316 |
| Msa0274650 | MtrunA17_Chr2g0332871 | 33.202 | 506 | 286 | 8 | 41 | 522 | 166 | 643 | 1.54e-91 | 293 |
| Msa0274650 | MtrunA17_Chr8g0379181 | 81.481 | 54 | 10 | 0 | 402 | 455 | 9 | 62 | 4.95e-23 | 92.4 |
| Msa0274650 | MtrunA17_Chr5g0418111 | 66.071 | 56 | 19 | 0 | 456 | 511 | 39 | 94 | 1.77e-19 | 83.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0274650 | AT2G34190.1 | 81.714 | 525 | 95 | 1 | 1 | 525 | 1 | 524 | 0.0 | 897 |
| Msa0274650 | AT2G05760.1 | 66.602 | 515 | 171 | 1 | 12 | 525 | 6 | 520 | 0.0 | 737 |
| Msa0274650 | AT5G62890.1 | 57.935 | 523 | 218 | 1 | 3 | 523 | 8 | 530 | 0.0 | 622 |
| Msa0274650 | AT5G62890.2 | 57.935 | 523 | 218 | 1 | 3 | 523 | 8 | 530 | 0.0 | 622 |
| Msa0274650 | AT5G62890.3 | 57.935 | 523 | 218 | 1 | 3 | 523 | 8 | 530 | 0.0 | 622 |
| Msa0274650 | AT1G60030.1 | 56.622 | 521 | 224 | 1 | 5 | 523 | 16 | 536 | 0.0 | 617 |
| Msa0274650 | AT2G26510.1 | 56.055 | 512 | 224 | 1 | 13 | 523 | 36 | 547 | 0.0 | 588 |
| Msa0274650 | AT1G10540.1 | 53.435 | 524 | 239 | 3 | 5 | 523 | 14 | 537 | 0.0 | 582 |
| Msa0274650 | AT5G49990.2 | 55.703 | 526 | 230 | 2 | 1 | 523 | 1 | 526 | 0.0 | 580 |
| Msa0274650 | AT5G49990.3 | 55.703 | 526 | 230 | 2 | 1 | 523 | 1 | 526 | 0.0 | 580 |
| Msa0274650 | AT5G49990.1 | 55.703 | 526 | 230 | 2 | 1 | 523 | 1 | 526 | 0.0 | 580 |
| Msa0274650 | AT5G49990.4 | 55.703 | 526 | 230 | 2 | 1 | 523 | 1 | 526 | 0.0 | 580 |
| Msa0274650 | AT1G49960.1 | 54.685 | 523 | 235 | 1 | 3 | 523 | 2 | 524 | 0.0 | 568 |
| Msa0274650 | AT1G65550.1 | 49.811 | 528 | 254 | 3 | 5 | 523 | 14 | 539 | 0.0 | 559 |
| Msa0274650 | AT5G62890.4 | 57.174 | 453 | 194 | 0 | 3 | 455 | 8 | 460 | 0.0 | 533 |
| Msa0274650 | AT1G10540.2 | 53.867 | 375 | 170 | 2 | 5 | 376 | 14 | 388 | 1.21e-142 | 416 |
| Msa0274650 | AT2G26510.3 | 55.769 | 364 | 161 | 0 | 13 | 376 | 36 | 399 | 2.22e-139 | 409 |
| Msa0274650 | AT2G26510.2 | 55.556 | 351 | 156 | 0 | 13 | 363 | 36 | 386 | 1.67e-133 | 394 |
| Msa0274650 | AT5G25420.1 | 43.349 | 436 | 179 | 5 | 5 | 440 | 26 | 393 | 6.74e-125 | 372 |
| Msa0274650 | AT2G27810.1 | 34.815 | 540 | 314 | 6 | 17 | 522 | 166 | 701 | 8.03e-98 | 311 |
| Msa0274650 | AT4G38050.1 | 35.393 | 534 | 309 | 5 | 21 | 522 | 175 | 704 | 1.20e-97 | 311 |
| Msa0274650 | AT2G27810.4 | 33.333 | 564 | 314 | 7 | 17 | 522 | 166 | 725 | 1.92e-92 | 298 |
| Msa0274650 | AT2G27810.2 | 35.681 | 426 | 254 | 4 | 17 | 424 | 166 | 589 | 1.23e-77 | 255 |
| Msa0274650 | AT2G27810.3 | 35.884 | 379 | 223 | 4 | 17 | 377 | 166 | 542 | 1.15e-65 | 222 |
Find 159 sgRNAs with CRISPR-Local
Find 278 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCAAGCATACAGATTATTT+TGG | 0.131330 | 2_3:+6511890 | Msa0274650:CDS |
| GGTGTAAAACTCTTCATTTC+TGG | 0.164331 | 2_3:-6514379 | None:intergenic |
| TGTCTTTCTTCAGGAAAATT+TGG | 0.179358 | 2_3:+6513495 | Msa0274650:intron |
| GGGAGGGTCTTATGCATTTA+TGG | 0.208667 | 2_3:+6511215 | Msa0274650:CDS |
| ATCTTGTTGAATGGACTATT+TGG | 0.208821 | 2_3:+6513168 | Msa0274650:CDS |
| GTAATTGCATTATCTGGTTT+TGG | 0.212700 | 2_3:+6512054 | Msa0274650:CDS |
| AACAGTGGAGTCAATTATTC+TGG | 0.216307 | 2_3:+6510846 | Msa0274650:intron |
| CAATTATATTGTGTTAATTC+TGG | 0.216551 | 2_3:-6512499 | None:intergenic |
| GTTGGACATTGTGTTGAAAT+TGG | 0.250807 | 2_3:+6512201 | Msa0274650:CDS |
| TGGCATGATGGCCGCTGTTT+TGG | 0.251529 | 2_3:+6512763 | Msa0274650:CDS |
| TCGTGAATAATGGATATAAT+TGG | 0.252861 | 2_3:-6511240 | None:intergenic |
| TTCATTTCTTGTGCCTTTGA+TGG | 0.265215 | 2_3:+6510915 | Msa0274650:CDS |
| ACCAAGTTTAGAACATTTAA+TGG | 0.265736 | 2_3:+6514351 | Msa0274650:CDS |
| GTTCCAGTAATTGCATTATC+TGG | 0.268188 | 2_3:+6512048 | Msa0274650:CDS |
| ACACTCTTTCAGACACTCTT+TGG | 0.275867 | 2_3:+6511171 | Msa0274650:CDS |
| TATAATATTTCTTCTTGCTT+TGG | 0.282010 | 2_3:-6510573 | None:intergenic |
| GCATAGATGCAAACCCTTCT+TGG | 0.282942 | 2_3:+6510634 | Msa0274650:CDS |
| TTTGATGTTGGTCATGCTTT+TGG | 0.285521 | 2_3:+6512743 | Msa0274650:CDS |
| CCATGGCATTCCCCTATCTT+TGG | 0.286512 | 2_3:-6514325 | None:intergenic |
| GTCTTCTATGGAGGCCAATT+TGG | 0.291156 | 2_3:-6511265 | None:intergenic |
| TTGTATCAACCACAATGATA+TGG | 0.300612 | 2_3:+6512431 | Msa0274650:CDS |
| TGTGTCCTGTTTGGCCTTGT+TGG | 0.301881 | 2_3:+6513564 | Msa0274650:CDS |
| CATAGATGCAAACCCTTCTT+GGG | 0.302981 | 2_3:+6510635 | Msa0274650:CDS |
| ATGAGGAGCCTCTTTATTAC+TGG | 0.305046 | 2_3:+6513712 | Msa0274650:CDS |
| GGCTCATAGTACCTCAATTA+AGG | 0.307644 | 2_3:-6512789 | None:intergenic |
| AGAGAGAATGTAGGGCTTCT+AGG | 0.315863 | 2_3:+6513294 | Msa0274650:intron |
| CATTATTCACGACTCCAAAT+TGG | 0.318094 | 2_3:+6511251 | Msa0274650:CDS |
| TGACACTGCTGAAATATTAA+TGG | 0.322004 | 2_3:-6510521 | None:intergenic |
| AATTATGGGCCATTTGTTCT+AGG | 0.323560 | 2_3:+6511922 | Msa0274650:CDS |
| AATAAGCCGAAAATAGCTTT+TGG | 0.326517 | 2_3:-6514722 | None:intergenic |
| TCTCGCTTCCATCATTTCAT+TGG | 0.327039 | 2_3:+6510368 | Msa0274650:five_prime_UTR |
| AAACCAGATAATGCAATTAC+TGG | 0.336298 | 2_3:-6512051 | None:intergenic |
| TTTGGGCTTTAGTCAATTAT+GGG | 0.341174 | 2_3:+6511908 | Msa0274650:CDS |
| AACCAAATGTGGGTCTTCTA+TGG | 0.351482 | 2_3:-6511277 | None:intergenic |
| CATAACTTTCTTCGTTAAGA+TGG | 0.352345 | 2_3:-6514432 | None:intergenic |
| GACTACAAGCCTGTTTGAAT+TGG | 0.353873 | 2_3:+6514622 | Msa0274650:three_prime_UTR |
| ACAAGAATAGCTCCAAAGAT+AGG | 0.366819 | 2_3:+6514313 | Msa0274650:CDS |
| TTCACTTCCAAGGCCCTTCA+TGG | 0.378070 | 2_3:+6513781 | Msa0274650:CDS |
| ATTTAACATAGACTTCTTCA+TGG | 0.386107 | 2_3:+6514587 | Msa0274650:three_prime_UTR |
| TTCTGAGCCGCGGTGTTGGC+TGG | 0.386703 | 2_3:+6513133 | Msa0274650:CDS |
| CTGCTCATACAAAGGCTAGA+TGG | 0.390944 | 2_3:+6513806 | Msa0274650:CDS |
| GGTGTTGGCTGGCAGGGAAT+TGG | 0.392481 | 2_3:+6513144 | Msa0274650:CDS |
| CCACCAATGGACCAACTTCA+TGG | 0.399447 | 2_3:+6510600 | Msa0274650:CDS |
| CATCTAGCCTTTGTATGAGC+AGG | 0.403393 | 2_3:-6513805 | None:intergenic |
| TTGTTTATCTGACAGTCAAC+TGG | 0.406456 | 2_3:+6513057 | Msa0274650:intron |
| GAGCCGCGGTGTTGGCTGGC+AGG | 0.407123 | 2_3:+6513137 | Msa0274650:CDS |
| TCAAATATGCCAATTCAAAC+AGG | 0.410323 | 2_3:-6514631 | None:intergenic |
| TCATTTCTTGTGCCTTTGAT+GGG | 0.420771 | 2_3:+6510916 | Msa0274650:CDS |
| AGCAGGGCCATGAAGGGCCT+TGG | 0.421593 | 2_3:-6513788 | None:intergenic |
| TTGGAGGGAAAGGGAAAGTA+AGG | 0.425984 | 2_3:-6510428 | None:intergenic |
| CAATTTGGAGTCGTGAATAA+TGG | 0.426971 | 2_3:-6511250 | None:intergenic |
| CGGTGTTGCACTTGCTAGCC+GGG | 0.429213 | 2_3:-6513097 | None:intergenic |
| TCCATTAAATGTTCTAAACT+TGG | 0.433772 | 2_3:-6514352 | None:intergenic |
| ACTCACCAACAAGGCCAAAC+AGG | 0.434703 | 2_3:-6513569 | None:intergenic |
| CGTGAATAATGGATATAATT+GGG | 0.435593 | 2_3:-6511239 | None:intergenic |
| GAATAGATAATCCCAAGAAA+AGG | 0.438521 | 2_3:-6513741 | None:intergenic |
| CTCCATAGAAGACCCACATT+TGG | 0.438916 | 2_3:+6511275 | Msa0274650:CDS |
| GTAGGAAAACCCCACTCAAA+AGG | 0.440834 | 2_3:-6512719 | None:intergenic |
| GCGGTGTTGCACTTGCTAGC+CGG | 0.441312 | 2_3:-6513098 | None:intergenic |
| GCTATGTACTGTGTCCTGTT+TGG | 0.442936 | 2_3:+6513555 | Msa0274650:CDS |
| ACCTCATTTCTTCTGCTCCA+TGG | 0.445011 | 2_3:+6512539 | Msa0274650:CDS |
| TGCACCTTGAACTGCTCTCA+TGG | 0.449979 | 2_3:-6511856 | None:intergenic |
| TCTGTTTGTAGCATTCTCTC+AGG | 0.452906 | 2_3:+6512239 | Msa0274650:CDS |
| GGAATTGGAATCTTGTTGAA+TGG | 0.453442 | 2_3:+6513159 | Msa0274650:CDS |
| CATGTTCTGAGCCGCGGTGT+TGG | 0.457466 | 2_3:+6513129 | Msa0274650:CDS |
| AATTAACACAATATAATTGC+AGG | 0.457977 | 2_3:+6512503 | Msa0274650:CDS |
| CAAGAATAGCTCCAAAGATA+GGG | 0.463643 | 2_3:+6514314 | Msa0274650:CDS |
| GGACTATTTGGAACACTGAC+TGG | 0.466218 | 2_3:+6513180 | Msa0274650:CDS |
| CTTATTTCTATAAGCTCTCT+AGG | 0.469989 | 2_3:+6514739 | Msa0274650:three_prime_UTR |
| AATAAATTACCTAGAACAAA+TGG | 0.470454 | 2_3:-6511931 | None:intergenic |
| TGCTCATACAAAGGCTAGAT+GGG | 0.470500 | 2_3:+6513807 | Msa0274650:CDS |
| ACAAAGTGTTGCTTAAATCA+TGG | 0.473081 | 2_3:+6510545 | Msa0274650:exon |
| TGAAATATTAATGGCTATGA+AGG | 0.474957 | 2_3:-6510512 | None:intergenic |
| TGTATCAACCACAATGATAT+GGG | 0.477279 | 2_3:+6512432 | Msa0274650:CDS |
| AGCCGCGGTGTTGGCTGGCA+GGG | 0.477678 | 2_3:+6513138 | Msa0274650:CDS |
| CCCTTCCTTTCAACCTCCAC+CGG | 0.480141 | 2_3:+6514400 | Msa0274650:CDS |
| TTCAGACACTCTTTGGAACT+CGG | 0.481780 | 2_3:+6511178 | Msa0274650:CDS |
| AATAGATAATCCCAAGAAAA+GGG | 0.484955 | 2_3:-6513740 | None:intergenic |
| AGAAACAACTTTGGAGGGAA+AGG | 0.489318 | 2_3:-6510438 | None:intergenic |
| AGAGTCATTCAAATTTCAGC+AGG | 0.489686 | 2_3:+6513339 | Msa0274650:CDS |
| TTGTATGAGCAGGGCCATGA+AGG | 0.491094 | 2_3:-6513795 | None:intergenic |
| TGAAAAGACAGAAACAACTT+TGG | 0.496810 | 2_3:-6510447 | None:intergenic |
| AAAAGTATGATTTCTAGATA+AGG | 0.496922 | 2_3:+6514481 | Msa0274650:three_prime_UTR |
| AGGGAAAGGGAAAGTAAGGT+TGG | 0.497576 | 2_3:-6510424 | None:intergenic |
| GGTAAAGACCAATGAAATGA+TGG | 0.497716 | 2_3:-6510376 | None:intergenic |
| AAAGCAAATCTCTCTAGTAT+TGG | 0.497957 | 2_3:-6512406 | None:intergenic |
| TGGAACACTGACTGGTTCAT+CGG | 0.499597 | 2_3:+6513188 | Msa0274650:CDS |
| ACCATGACAGAGAGAATGTA+GGG | 0.501591 | 2_3:+6513286 | Msa0274650:intron |
| ATGATATTCTTCTCAATGCT+AGG | 0.506019 | 2_3:+6513366 | Msa0274650:CDS |
| GCACATCTCTTAACAACAAG+TGG | 0.507738 | 2_3:+6512460 | Msa0274650:CDS |
| GGAGTGAGTCAATGTTGAAA+AGG | 0.510122 | 2_3:-6510403 | None:intergenic |
| AGAAATGTACTAACCAAATG+TGG | 0.512832 | 2_3:-6511288 | None:intergenic |
| GTGATGATTGTGTATCATAT+TGG | 0.512902 | 2_3:+6514536 | Msa0274650:three_prime_UTR |
| CCATGAAGTTGGTCCATTGG+TGG | 0.513106 | 2_3:-6510600 | None:intergenic |
| TAGGAAAACCCCACTCAAAA+GGG | 0.515152 | 2_3:-6512718 | None:intergenic |
| ATCAAAGGCACAAGAAATGA+AGG | 0.517148 | 2_3:-6510913 | None:intergenic |
| ACAGTGGAGTCAATTATTCT+GGG | 0.518411 | 2_3:+6510847 | Msa0274650:intron |
| AAACCCCACTCAAAAGGGTA+TGG | 0.522899 | 2_3:-6512713 | None:intergenic |
| ACCGGTGGAGGTTGAAAGGA+AGG | 0.527236 | 2_3:-6514401 | None:intergenic |
| AACTTTCTTCGTTAAGATGG+AGG | 0.532170 | 2_3:-6514429 | None:intergenic |
| TTTCTTGTGCCTTTGATGGG+TGG | 0.532477 | 2_3:+6510919 | Msa0274650:CDS |
| ACCATGGAGCAGAAGAAATG+AGG | 0.539829 | 2_3:-6512540 | None:intergenic |
| TTTCAGAGAATTCACTTCCA+AGG | 0.541420 | 2_3:+6513771 | Msa0274650:CDS |
| GTCGTACCACAGGGAACCCT+CGG | 0.543240 | 2_3:-6512086 | None:intergenic |
| AAAACCATGAGAGCAGTTCA+AGG | 0.544297 | 2_3:+6511852 | Msa0274650:CDS |
| GAAACAACTTTGGAGGGAAA+GGG | 0.544759 | 2_3:-6510437 | None:intergenic |
| ACTTTCTTCGTTAAGATGGA+GGG | 0.545990 | 2_3:-6514428 | None:intergenic |
| ATGCCATGAAGTTGGTCCAT+TGG | 0.548504 | 2_3:-6510603 | None:intergenic |
| GGGAAACACCAGTAATAAAG+AGG | 0.549962 | 2_3:-6513720 | None:intergenic |
| GCATGACCAACATCAAATGT+AGG | 0.550797 | 2_3:-6512737 | None:intergenic |
| AAAGACAGAAACAACTTTGG+AGG | 0.552398 | 2_3:-6510444 | None:intergenic |
| CTCAGAACATGAGGAGGCGG+CGG | 0.558241 | 2_3:-6513117 | None:intergenic |
| GTGAATTCTCTGAAATACTC+AGG | 0.558403 | 2_3:-6513763 | None:intergenic |
| AGTCAATGTTGAAAAGGAGA+AGG | 0.559185 | 2_3:-6510397 | None:intergenic |
| AACTCGGTTACCAACAGTGA+TGG | 0.563295 | 2_3:+6511194 | Msa0274650:CDS |
| TCATGGCCCTGCTCATACAA+AGG | 0.565723 | 2_3:+6513798 | Msa0274650:CDS |
| AACAATGAATGCAACAGTTG+AGG | 0.566026 | 2_3:-6514262 | None:intergenic |
| CATGAAGTTGGTCCATTGGT+GGG | 0.571065 | 2_3:-6510599 | None:intergenic |
| CGTCAAGAAAATATGTTGAG+AGG | 0.571206 | 2_3:+6514458 | Msa0274650:three_prime_UTR |
| TGCTACAAACAGAATTAACA+TGG | 0.573720 | 2_3:-6512229 | None:intergenic |
| AAGACAGAAACAACTTTGGA+GGG | 0.575540 | 2_3:-6510443 | None:intergenic |
| AGTGGATACTAACCCCAAGA+AGG | 0.577397 | 2_3:-6510648 | None:intergenic |
| ACTCGGTTACCAACAGTGAT+GGG | 0.579565 | 2_3:+6511195 | Msa0274650:CDS |
| AGTACTCTATGCCATGAAGT+TGG | 0.580671 | 2_3:-6510611 | None:intergenic |
| CGGCTCAGAACATGAGGAGG+CGG | 0.580815 | 2_3:-6513120 | None:intergenic |
| TAAGACCCTCCCATCACTGT+TGG | 0.582978 | 2_3:-6511204 | None:intergenic |
| CTTCTAGGAAGTACTCGTGT+TGG | 0.586135 | 2_3:+6513309 | Msa0274650:CDS |
| ATCTAGCCTTTGTATGAGCA+GGG | 0.587048 | 2_3:-6513804 | None:intergenic |
| TGGAGCAGAAGAAATGAGGT+TGG | 0.588053 | 2_3:-6512536 | None:intergenic |
| AAGAATAGCTCCAAAGATAG+GGG | 0.595815 | 2_3:+6514315 | Msa0274650:CDS |
| ACACCGCGGCTCAGAACATG+AGG | 0.597392 | 2_3:-6513126 | None:intergenic |
| GAGCATACACAGCTGCGTCC+CGG | 0.599026 | 2_3:+6513079 | Msa0274650:CDS |
| TGTATGAGCAGGGCCATGAA+GGG | 0.600095 | 2_3:-6513794 | None:intergenic |
| TGTTGTTAAGAGATGTGCAT+AGG | 0.600614 | 2_3:-6512455 | None:intergenic |
| AACCATGACAGAGAGAATGT+AGG | 0.602496 | 2_3:+6513285 | Msa0274650:intron |
| ACATCAGTTCCACCCATCAA+AGG | 0.612232 | 2_3:-6510928 | None:intergenic |
| GTGGATACTAACCCCAAGAA+GGG | 0.612506 | 2_3:-6510647 | None:intergenic |
| CCTCCTCATGTTCTGAGCCG+CGG | 0.613487 | 2_3:+6513123 | Msa0274650:CDS |
| AATATTATACCACCCACCAA+TGG | 0.613532 | 2_3:+6510587 | Msa0274650:CDS |
| GAAATGTACTAACCAAATGT+GGG | 0.622722 | 2_3:-6511287 | None:intergenic |
| TCAGGGTGATAAAGTGAGAG+TGG | 0.627396 | 2_3:+6511116 | Msa0274650:intron |
| CAAATGTGGGTCTTCTATGG+AGG | 0.629533 | 2_3:-6511274 | None:intergenic |
| CCGCGGCTCAGAACATGAGG+AGG | 0.643457 | 2_3:-6513123 | None:intergenic |
| ATAGATGCAAACCCTTCTTG+GGG | 0.648257 | 2_3:+6510636 | Msa0274650:CDS |
| TTTATTAATACTCACCAACA+AGG | 0.649656 | 2_3:-6513578 | None:intergenic |
| GTTCTAAACTTGGTCCACCA+TGG | 0.655549 | 2_3:-6514342 | None:intergenic |
| CGGTTACCAACAGTGATGGG+AGG | 0.660854 | 2_3:+6511198 | Msa0274650:CDS |
| TTACTAACATGAACTCAATG+AGG | 0.664480 | 2_3:+6513695 | Msa0274650:CDS |
| GGTTACCAACAGTGATGGGA+GGG | 0.664821 | 2_3:+6511199 | Msa0274650:CDS |
| GAAGTTGGTCCATTGGTGGG+TGG | 0.667936 | 2_3:-6510596 | None:intergenic |
| GCTACAAACAGAATTAACAT+GGG | 0.677346 | 2_3:-6512228 | None:intergenic |
| TGCATAGGCCCATATCATTG+TGG | 0.683156 | 2_3:-6512440 | None:intergenic |
| AAGATAGGGGAATGCCATGG+TGG | 0.684562 | 2_3:+6514328 | Msa0274650:CDS |
| ATTACTGGAACCATTCCAAG+TGG | 0.687109 | 2_3:-6512036 | None:intergenic |
| CCGGTGGAGGTTGAAAGGAA+GGG | 0.694820 | 2_3:-6514400 | None:intergenic |
| TTCCCTGCCAGCCAACACCG+CGG | 0.694982 | 2_3:-6513140 | None:intergenic |
| CCAAAGATAGGGGAATGCCA+TGG | 0.696229 | 2_3:+6514325 | Msa0274650:CDS |
| ATTTAACCGAGGGTTCCCTG+TGG | 0.725174 | 2_3:+6512080 | Msa0274650:CDS |
| AATTAAGGAGACCAAAACAG+CGG | 0.734250 | 2_3:-6512774 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTTTTTTGATAATCTA+GGG | - | chr2_3:6510974-6510993 | None:intergenic | 10.0% |
| !!! | TTTATTTTTTTTGATAATCT+AGG | - | chr2_3:6510975-6510994 | None:intergenic | 10.0% |
| !! | AAAAATAAAGAGAAGAAAAA+GGG | - | chr2_3:6510489-6510508 | None:intergenic | 15.0% |
| !! | TTGAATATCAAAGAAATTAA+GGG | - | chr2_3:6511010-6511029 | None:intergenic | 15.0% |
| !! | ATTGAATATCAAAGAAATTA+AGG | - | chr2_3:6511011-6511030 | None:intergenic | 15.0% |
| !!! | AGTTGGTATTTATTAATTAT+TGG | + | chr2_3:6511066-6511085 | Msa0274650:intron | 15.0% |
| !! | ATAGATTATAAAAATGTACT+AGG | - | chr2_3:6511324-6511343 | None:intergenic | 15.0% |
| !! | GAAAAATAAAGAGAAGAAAA+AGG | - | chr2_3:6510490-6510509 | None:intergenic | 20.0% |
| !! | TATAATATTTCTTCTTGCTT+TGG | - | chr2_3:6510576-6510595 | None:intergenic | 20.0% |
| !!! | TATTTAGTTTATTATGAGCT+AGG | + | chr2_3:6510778-6510797 | Msa0274650:intron | 20.0% |
| !!! | TTTTCTATTTTACGATGTTT+AGG | + | chr2_3:6511527-6511546 | Msa0274650:intron | 20.0% |
| !!! | TTTCTATTTTACGATGTTTA+GGG | + | chr2_3:6511528-6511547 | Msa0274650:intron | 20.0% |
| !!! | TTTTCTATTATACAATGCTT+AGG | + | chr2_3:6511720-6511739 | Msa0274650:intron | 20.0% |
| !! | AACAAATCTCTGAATATAAA+TGG | - | chr2_3:6511832-6511851 | None:intergenic | 20.0% |
| !! | AATAAATTACCTAGAACAAA+TGG | - | chr2_3:6511934-6511953 | None:intergenic | 20.0% |
| !! | CAATTATATTGTGTTAATTC+TGG | - | chr2_3:6512502-6512521 | None:intergenic | 20.0% |
| !! | AATTAACACAATATAATTGC+AGG | + | chr2_3:6512503-6512522 | Msa0274650:CDS | 20.0% |
| !!! | AACTACTTAAGAGATTATTT+TGG | - | chr2_3:6512571-6512590 | None:intergenic | 20.0% |
| !! | TGAAATAAGTTAATCCAAAA+AGG | - | chr2_3:6512813-6512832 | None:intergenic | 20.0% |
| !!! | TTCATAGTTTTCACTTTAAA+TGG | + | chr2_3:6513241-6513260 | Msa0274650:intron | 20.0% |
| !!! | GAAAGTACATTAATTTTGAT+AGG | - | chr2_3:6513417-6513436 | None:intergenic | 20.0% |
| !!! | GATATTTTATTGAAACCAAA+TGG | + | chr2_3:6513968-6513987 | Msa0274650:intron | 20.0% |
| !!! | AAAAGTATGATTTCTAGATA+AGG | + | chr2_3:6514481-6514500 | Msa0274650:three_prime_UTR | 20.0% |
| ! | TGAAATATTAATGGCTATGA+AGG | - | chr2_3:6510515-6510534 | None:intergenic | 25.0% |
| ! | TTCATTATATAATGGTGCTT+TGG | + | chr2_3:6510720-6510739 | Msa0274650:intron | 25.0% |
| ! | TATGATTCAATGAATGATTC+AGG | + | chr2_3:6511098-6511117 | Msa0274650:intron | 25.0% |
| ! | ATGATTCAATGAATGATTCA+GGG | + | chr2_3:6511099-6511118 | Msa0274650:intron | 25.0% |
| !!! | CGTGAATAATGGATATAATT+GGG | - | chr2_3:6511242-6511261 | None:intergenic | 25.0% |
| !!! | TCGTGAATAATGGATATAAT+TGG | - | chr2_3:6511243-6511262 | None:intergenic | 25.0% |
| ! | CTACTTATCTGTTTACTTTA+GGG | - | chr2_3:6511430-6511449 | None:intergenic | 25.0% |
| ! | TCTACTTATCTGTTTACTTT+AGG | - | chr2_3:6511431-6511450 | None:intergenic | 25.0% |
| !! | TCTTTTCATCTCAATTTACT+CGG | + | chr2_3:6511582-6511601 | Msa0274650:intron | 25.0% |
| ! | TGAAATGTACTACTAAGAAA+GGG | - | chr2_3:6511629-6511648 | None:intergenic | 25.0% |
| ! | TTGAAATGTACTACTAAGAA+AGG | - | chr2_3:6511630-6511649 | None:intergenic | 25.0% |
| !! | CAATTTTAAGCTCATGATTT+TGG | + | chr2_3:6511647-6511666 | Msa0274650:intron | 25.0% |
| !! | ATCAAGCATACAGATTATTT+TGG | + | chr2_3:6511890-6511909 | Msa0274650:CDS | 25.0% |
| !! | TCAAGCATACAGATTATTTT+GGG | + | chr2_3:6511891-6511910 | Msa0274650:CDS | 25.0% |
| ! | TGAAAAACCTGGAAATTAAT+AGG | - | chr2_3:6512014-6512033 | None:intergenic | 25.0% |
| !!! | TTTTTGTTTCCTTTTTCTTC+AGG | + | chr2_3:6512179-6512198 | Msa0274650:intron | 25.0% |
| ! | TTACAACAATATCTCAACAA+GGG | - | chr2_3:6512656-6512675 | None:intergenic | 25.0% |
| ! | TTTACAACAATATCTCAACA+AGG | - | chr2_3:6512657-6512676 | None:intergenic | 25.0% |
| ! | TTTATTAATACTCACCAACA+AGG | - | chr2_3:6513581-6513600 | None:intergenic | 25.0% |
| ! | AATAGATAATCCCAAGAAAA+GGG | - | chr2_3:6513743-6513762 | None:intergenic | 25.0% |
| ! | TAATTATCATCAGAAAGTGA+CGG | + | chr2_3:6514085-6514104 | Msa0274650:intron | 25.0% |
| ! | GAACTGAAAAACAAATCAAA+AGG | - | chr2_3:6514211-6514230 | None:intergenic | 25.0% |
| !! | ACCAAGTTTAGAACATTTAA+TGG | + | chr2_3:6514351-6514370 | Msa0274650:CDS | 25.0% |
| !! | TCCATTAAATGTTCTAAACT+TGG | - | chr2_3:6514355-6514374 | None:intergenic | 25.0% |
| !! | ATTTTCTTAGTGTGATAGTT+AGG | + | chr2_3:6514509-6514528 | Msa0274650:three_prime_UTR | 25.0% |
| ! | ATTTAACATAGACTTCTTCA+TGG | + | chr2_3:6514587-6514606 | Msa0274650:three_prime_UTR | 25.0% |
| TGAAAAGACAGAAACAACTT+TGG | - | chr2_3:6510450-6510469 | None:intergenic | 30.0% | |
| TGACACTGCTGAAATATTAA+TGG | - | chr2_3:6510524-6510543 | None:intergenic | 30.0% | |
| !! | ACAAAGTGTTGCTTAAATCA+TGG | + | chr2_3:6510545-6510564 | Msa0274650:exon | 30.0% |
| !! | ATGTTTTGAACTATGAACAG+TGG | + | chr2_3:6510831-6510850 | Msa0274650:intron | 30.0% |
| GAAATGTACTAACCAAATGT+GGG | - | chr2_3:6511290-6511309 | None:intergenic | 30.0% | |
| AGAAATGTACTAACCAAATG+TGG | - | chr2_3:6511291-6511310 | None:intergenic | 30.0% | |
| CAATGATTGATTACTGAGTT+CGG | + | chr2_3:6511463-6511482 | Msa0274650:intron | 30.0% | |
| !! | TTTTGGGCTTTAGTCAATTA+TGG | + | chr2_3:6511907-6511926 | Msa0274650:CDS | 30.0% |
| ! | TTTGGGCTTTAGTCAATTAT+GGG | + | chr2_3:6511908-6511927 | Msa0274650:CDS | 30.0% |
| AAAACCTGGAAATTAATAGG+AGG | - | chr2_3:6512011-6512030 | None:intergenic | 30.0% | |
| AAACCAGATAATGCAATTAC+TGG | - | chr2_3:6512054-6512073 | None:intergenic | 30.0% | |
| !! | GTAATTGCATTATCTGGTTT+TGG | + | chr2_3:6512054-6512073 | Msa0274650:CDS | 30.0% |
| GCTACAAACAGAATTAACAT+GGG | - | chr2_3:6512231-6512250 | None:intergenic | 30.0% | |
| TGCTACAAACAGAATTAACA+TGG | - | chr2_3:6512232-6512251 | None:intergenic | 30.0% | |
| TGACATCATAAAAGTGAAGT+TGG | - | chr2_3:6512270-6512289 | None:intergenic | 30.0% | |
| AAAGCAAATCTCTCTAGTAT+TGG | - | chr2_3:6512409-6512428 | None:intergenic | 30.0% | |
| TTGTATCAACCACAATGATA+TGG | + | chr2_3:6512431-6512450 | Msa0274650:CDS | 30.0% | |
| TGTATCAACCACAATGATAT+GGG | + | chr2_3:6512432-6512451 | Msa0274650:CDS | 30.0% | |
| !!! | GATTATTTTGGTACTAACCA+TGG | - | chr2_3:6512559-6512578 | None:intergenic | 30.0% |
| TCTTAAATATGTTGCCTTAC+AGG | + | chr2_3:6512681-6512700 | Msa0274650:intron | 30.0% | |
| ! | AGACTGTTTGAAATAGCTTA+TGG | + | chr2_3:6512860-6512879 | Msa0274650:intron | 30.0% |
| ! | TTTGAAATAGCTTATGGCTA+CGG | + | chr2_3:6512866-6512885 | Msa0274650:intron | 30.0% |
| !! | GTTGTTTTCATAAGCTATCA+TGG | - | chr2_3:6512939-6512958 | None:intergenic | 30.0% |
| !! | ATCTTGTTGAATGGACTATT+TGG | + | chr2_3:6513168-6513187 | Msa0274650:CDS | 30.0% |
| ATGATATTCTTCTCAATGCT+AGG | + | chr2_3:6513366-6513385 | Msa0274650:CDS | 30.0% | |
| CATAATTCATGTCTTTCTTC+AGG | + | chr2_3:6513486-6513505 | Msa0274650:intron | 30.0% | |
| TGTCTTTCTTCAGGAAAATT+TGG | + | chr2_3:6513495-6513514 | Msa0274650:intron | 30.0% | |
| AGTACATAGCAGCAAAAATA+GGG | - | chr2_3:6513545-6513564 | None:intergenic | 30.0% | |
| AAATGCTCAAACAAAGTCAA+AGG | - | chr2_3:6513610-6513629 | None:intergenic | 30.0% | |
| TTACTAACATGAACTCAATG+AGG | + | chr2_3:6513695-6513714 | Msa0274650:CDS | 30.0% | |
| GAATAGATAATCCCAAGAAA+AGG | - | chr2_3:6513744-6513763 | None:intergenic | 30.0% | |
| !! | TGCATGTACTGATTTATGTA+TGG | + | chr2_3:6514012-6514031 | Msa0274650:intron | 30.0% |
| ATAGTTGTGAATTCTTCATC+TGG | + | chr2_3:6514036-6514055 | Msa0274650:intron | 30.0% | |
| ! | ATTCATTGTTGCTGTGTTTT+TGG | + | chr2_3:6514275-6514294 | Msa0274650:CDS | 30.0% |
| CATAACTTTCTTCGTTAAGA+TGG | - | chr2_3:6514435-6514454 | None:intergenic | 30.0% | |
| GTGATGATTGTGTATCATAT+TGG | + | chr2_3:6514536-6514555 | Msa0274650:three_prime_UTR | 30.0% | |
| TCAAATATGCCAATTCAAAC+AGG | - | chr2_3:6514634-6514653 | None:intergenic | 30.0% | |
| ! | AATAAGCCGAAAATAGCTTT+TGG | - | chr2_3:6514725-6514744 | None:intergenic | 30.0% |
| GGTAAAGACCAATGAAATGA+TGG | - | chr2_3:6510379-6510398 | None:intergenic | 35.0% | |
| AGTCAATGTTGAAAAGGAGA+AGG | - | chr2_3:6510400-6510419 | None:intergenic | 35.0% | |
| AAGACAGAAACAACTTTGGA+GGG | - | chr2_3:6510446-6510465 | None:intergenic | 35.0% | |
| AAAGACAGAAACAACTTTGG+AGG | - | chr2_3:6510447-6510466 | None:intergenic | 35.0% | |
| AAGAAAAAGGGTTGAGAGAA+AGG | - | chr2_3:6510477-6510496 | None:intergenic | 35.0% | |
| AATATTATACCACCCACCAA+TGG | + | chr2_3:6510587-6510606 | Msa0274650:CDS | 35.0% | |
| TAAGAATGAAAATGCAGAGG+AGG | - | chr2_3:6510676-6510695 | None:intergenic | 35.0% | |
| GCTTAAGAATGAAAATGCAG+AGG | - | chr2_3:6510679-6510698 | None:intergenic | 35.0% | |
| ! | TGCTTTGGTTCATGCTATAT+AGG | + | chr2_3:6510735-6510754 | Msa0274650:intron | 35.0% |
| ! | ATTATGAGCTAGGACCATTT+TGG | + | chr2_3:6510788-6510807 | Msa0274650:intron | 35.0% |
| AACAGTGGAGTCAATTATTC+TGG | + | chr2_3:6510846-6510865 | Msa0274650:intron | 35.0% | |
| ACAGTGGAGTCAATTATTCT+GGG | + | chr2_3:6510847-6510866 | Msa0274650:intron | 35.0% | |
| ! | GGGTTTTCAGCATTACATTT+TGG | + | chr2_3:6510867-6510886 | Msa0274650:CDS | 35.0% |
| !!! | CAGCATTACATTTTGGCTTT+AGG | + | chr2_3:6510874-6510893 | Msa0274650:CDS | 35.0% |
| ! | ATCAAAGGCACAAGAAATGA+AGG | - | chr2_3:6510916-6510935 | None:intergenic | 35.0% |
| TTCATTTCTTGTGCCTTTGA+TGG | + | chr2_3:6510915-6510934 | Msa0274650:CDS | 35.0% | |
| TCATTTCTTGTGCCTTTGAT+GGG | + | chr2_3:6510916-6510935 | Msa0274650:CDS | 35.0% | |
| !!! | CAGATTCTGCTTTTTGTAGA+AGG | + | chr2_3:6511141-6511160 | Msa0274650:CDS | 35.0% |
| ! | CAATTTGGAGTCGTGAATAA+TGG | - | chr2_3:6511253-6511272 | None:intergenic | 35.0% |
| CATTATTCACGACTCCAAAT+TGG | + | chr2_3:6511251-6511270 | Msa0274650:CDS | 35.0% | |
| !! | TATCTGTTTACTTTAGGGCA+GGG | - | chr2_3:6511425-6511444 | None:intergenic | 35.0% |
| !! | TTATCTGTTTACTTTAGGGC+AGG | - | chr2_3:6511426-6511445 | None:intergenic | 35.0% |
| GTTAAAGACCAAGACACAAT+TGG | - | chr2_3:6511489-6511508 | None:intergenic | 35.0% | |
| ! | GTTTAGGGTTATAACGTACA+AGG | + | chr2_3:6511543-6511562 | Msa0274650:intron | 35.0% |
| ATTAGTGTTAGAACCGAGTT+TGG | + | chr2_3:6511686-6511705 | Msa0274650:intron | 35.0% | |
| AAGCTACAATTAGCCAAACT+CGG | - | chr2_3:6511702-6511721 | None:intergenic | 35.0% | |
| AATTATGGGCCATTTGTTCT+AGG | + | chr2_3:6511922-6511941 | Msa0274650:CDS | 35.0% | |
| GTTTCCTCCTATTAATTTCC+AGG | + | chr2_3:6512004-6512023 | Msa0274650:intron | 35.0% | |
| GTTCCAGTAATTGCATTATC+TGG | + | chr2_3:6512048-6512067 | Msa0274650:CDS | 35.0% | |
| !!! | GTTTTGGCTTATTTAACCGA+GGG | + | chr2_3:6512070-6512089 | Msa0274650:CDS | 35.0% |
| ! | TGTTTCCTTTTTCTTCAGGT+TGG | + | chr2_3:6512183-6512202 | Msa0274650:intron | 35.0% |
| AATGTCCAACCTGAAGAAAA+AGG | - | chr2_3:6512191-6512210 | None:intergenic | 35.0% | |
| GTTGGACATTGTGTTGAAAT+TGG | + | chr2_3:6512201-6512220 | Msa0274650:CDS | 35.0% | |
| TGTTGTTAAGAGATGTGCAT+AGG | - | chr2_3:6512458-6512477 | None:intergenic | 35.0% | |
| TATGGAATCTTCATCCTGTA+AGG | - | chr2_3:6512698-6512717 | None:intergenic | 35.0% | |
| ! | GGTTTTCCTACATTTGATGT+TGG | + | chr2_3:6512731-6512750 | Msa0274650:CDS | 35.0% |
| ! | TTTGATGTTGGTCATGCTTT+TGG | + | chr2_3:6512743-6512762 | Msa0274650:CDS | 35.0% |
| AATTAAGGAGACCAAAACAG+CGG | - | chr2_3:6512777-6512796 | None:intergenic | 35.0% | |
| !!! | TGTTTTGGTCTCCTTAATTG+AGG | + | chr2_3:6512778-6512797 | Msa0274650:CDS | 35.0% |
| ! | GCTATTTCAAACAGTCTAAC+AGG | - | chr2_3:6512857-6512876 | None:intergenic | 35.0% |
| TTGTTTATCTGACAGTCAAC+TGG | + | chr2_3:6513057-6513076 | Msa0274650:intron | 35.0% | |
| GGAATTGGAATCTTGTTGAA+TGG | + | chr2_3:6513159-6513178 | Msa0274650:CDS | 35.0% | |
| AGAGTCATTCAAATTTCAGC+AGG | + | chr2_3:6513339-6513358 | Msa0274650:CDS | 35.0% | |
| ATAGCAGCAAAAATAGGGAA+GGG | - | chr2_3:6513540-6513559 | None:intergenic | 35.0% | |
| CAGTACATAGCAGCAAAAAT+AGG | - | chr2_3:6513546-6513565 | None:intergenic | 35.0% | |
| !! | ATTGTGTTTTTCAGCTTCTG+TGG | + | chr2_3:6513654-6513673 | Msa0274650:intron | 35.0% |
| !! | TTGTGTTTTTCAGCTTCTGT+GGG | + | chr2_3:6513655-6513674 | Msa0274650:intron | 35.0% |
| !! | GTGAATTCTCTGAAATACTC+AGG | - | chr2_3:6513766-6513785 | None:intergenic | 35.0% |
| TTTCAGAGAATTCACTTCCA+AGG | + | chr2_3:6513771-6513790 | Msa0274650:CDS | 35.0% | |
| ! | TGAATCTGAAATTCCACCTA+AGG | - | chr2_3:6513900-6513919 | None:intergenic | 35.0% |
| AACAATGAATGCAACAGTTG+AGG | - | chr2_3:6514265-6514284 | None:intergenic | 35.0% | |
| ACAAGAATAGCTCCAAAGAT+AGG | + | chr2_3:6514313-6514332 | Msa0274650:CDS | 35.0% | |
| CAAGAATAGCTCCAAAGATA+GGG | + | chr2_3:6514314-6514333 | Msa0274650:CDS | 35.0% | |
| AAGAATAGCTCCAAAGATAG+GGG | + | chr2_3:6514315-6514334 | Msa0274650:CDS | 35.0% | |
| GGTGTAAAACTCTTCATTTC+TGG | - | chr2_3:6514382-6514401 | None:intergenic | 35.0% | |
| ACTTTCTTCGTTAAGATGGA+GGG | - | chr2_3:6514431-6514450 | None:intergenic | 35.0% | |
| AACTTTCTTCGTTAAGATGG+AGG | - | chr2_3:6514432-6514451 | None:intergenic | 35.0% | |
| CGTCAAGAAAATATGTTGAG+AGG | + | chr2_3:6514458-6514477 | Msa0274650:three_prime_UTR | 35.0% | |
| ! | TTCTTCATGGCCTTTCTTTT+TGG | + | chr2_3:6514600-6514619 | Msa0274650:three_prime_UTR | 35.0% |
| !! | GCATGTCCAAAAGCTATTTT+CGG | + | chr2_3:6514716-6514735 | Msa0274650:three_prime_UTR | 35.0% |
| TCTCGCTTCCATCATTTCAT+TGG | + | chr2_3:6510368-6510387 | Msa0274650:five_prime_UTR | 40.0% | |
| GGAGTGAGTCAATGTTGAAA+AGG | - | chr2_3:6510406-6510425 | None:intergenic | 40.0% | |
| ! | GAAACAACTTTGGAGGGAAA+GGG | - | chr2_3:6510440-6510459 | None:intergenic | 40.0% |
| ! | AGAAACAACTTTGGAGGGAA+AGG | - | chr2_3:6510441-6510460 | None:intergenic | 40.0% |
| AAAAAGGGTTGAGAGAAAGG+TGG | - | chr2_3:6510474-6510493 | None:intergenic | 40.0% | |
| AGTACTCTATGCCATGAAGT+TGG | - | chr2_3:6510614-6510633 | None:intergenic | 40.0% | |
| CATAGATGCAAACCCTTCTT+GGG | + | chr2_3:6510635-6510654 | Msa0274650:CDS | 40.0% | |
| ATAGATGCAAACCCTTCTTG+GGG | + | chr2_3:6510636-6510655 | Msa0274650:CDS | 40.0% | |
| CACTCTCAGTGAAACCAAAA+TGG | - | chr2_3:6510805-6510824 | None:intergenic | 40.0% | |
| TCCTAGATAGAGAAGAGAGT+TGG | + | chr2_3:6511049-6511068 | Msa0274650:intron | 40.0% | |
| ACCAACTCTCTTCTCTATCT+AGG | - | chr2_3:6511053-6511072 | None:intergenic | 40.0% | |
| ACACTCTTTCAGACACTCTT+TGG | + | chr2_3:6511171-6511190 | Msa0274650:CDS | 40.0% | |
| !! | TTCAGACACTCTTTGGAACT+CGG | + | chr2_3:6511178-6511197 | Msa0274650:CDS | 40.0% |
| AACCAAATGTGGGTCTTCTA+TGG | - | chr2_3:6511280-6511299 | None:intergenic | 40.0% | |
| AAAACCATGAGAGCAGTTCA+AGG | + | chr2_3:6511852-6511871 | Msa0274650:CDS | 40.0% | |
| !! | GTTTTTCAGTCCACTTGGAA+TGG | + | chr2_3:6512026-6512045 | Msa0274650:CDS | 40.0% |
| ATTACTGGAACCATTCCAAG+TGG | - | chr2_3:6512039-6512058 | None:intergenic | 40.0% | |
| !!! | GGTTTTGGCTTATTTAACCG+AGG | + | chr2_3:6512069-6512088 | Msa0274650:CDS | 40.0% |
| TGAACTATTGTCGTACCACA+GGG | - | chr2_3:6512098-6512117 | None:intergenic | 40.0% | |
| TCTTAAGTTCACCTCTTCCT+AGG | + | chr2_3:6512136-6512155 | Msa0274650:intron | 40.0% | |
| TAAAATACGAGCCTAGGAAG+AGG | - | chr2_3:6512150-6512169 | None:intergenic | 40.0% | |
| AGAAGCTAAAATACGAGCCT+AGG | - | chr2_3:6512156-6512175 | None:intergenic | 40.0% | |
| TCTGTTTGTAGCATTCTCTC+AGG | + | chr2_3:6512239-6512258 | Msa0274650:CDS | 40.0% | |
| GCACATCTCTTAACAACAAG+TGG | + | chr2_3:6512460-6512479 | Msa0274650:CDS | 40.0% | |
| ! | AGATTCCATACCCTTTTGAG+TGG | + | chr2_3:6512708-6512727 | Msa0274650:CDS | 40.0% |
| !! | GATTCCATACCCTTTTGAGT+GGG | + | chr2_3:6512709-6512728 | Msa0274650:CDS | 40.0% |
| !! | ATTCCATACCCTTTTGAGTG+GGG | + | chr2_3:6512710-6512729 | Msa0274650:CDS | 40.0% |
| TAGGAAAACCCCACTCAAAA+GGG | - | chr2_3:6512721-6512740 | None:intergenic | 40.0% | |
| GCATGACCAACATCAAATGT+AGG | - | chr2_3:6512740-6512759 | None:intergenic | 40.0% | |
| GGCTCATAGTACCTCAATTA+AGG | - | chr2_3:6512792-6512811 | None:intergenic | 40.0% | |
| !! | TGAGGTACTATGAGCCTTTT+TGG | + | chr2_3:6512796-6512815 | Msa0274650:intron | 40.0% |
| AACCATGACAGAGAGAATGT+AGG | + | chr2_3:6513285-6513304 | Msa0274650:intron | 40.0% | |
| ACCATGACAGAGAGAATGTA+GGG | + | chr2_3:6513286-6513305 | Msa0274650:intron | 40.0% | |
| CATAGCAGCAAAAATAGGGA+AGG | - | chr2_3:6513541-6513560 | None:intergenic | 40.0% | |
| TGCTCAAACAAAGTCAAAGG+TGG | - | chr2_3:6513607-6513626 | None:intergenic | 40.0% | |
| !! | TGTGTTTTTCAGCTTCTGTG+GGG | + | chr2_3:6513656-6513675 | Msa0274650:intron | 40.0% |
| ATGAGGAGCCTCTTTATTAC+TGG | + | chr2_3:6513712-6513731 | Msa0274650:CDS | 40.0% | |
| GGGAAACACCAGTAATAAAG+AGG | - | chr2_3:6513723-6513742 | None:intergenic | 40.0% | |
| ! | TACTGGTGTTTCCCTTTTCT+TGG | + | chr2_3:6513729-6513748 | Msa0274650:CDS | 40.0% |
| ! | ACTGGTGTTTCCCTTTTCTT+GGG | + | chr2_3:6513730-6513749 | Msa0274650:CDS | 40.0% |
| ! | ATCTAGCCTTTGTATGAGCA+GGG | - | chr2_3:6513807-6513826 | None:intergenic | 40.0% |
| TGCTCATACAAAGGCTAGAT+GGG | + | chr2_3:6513807-6513826 | Msa0274650:CDS | 40.0% | |
| GATAGTGAGTAGTAGCCATT+TGG | - | chr2_3:6513986-6514005 | None:intergenic | 40.0% | |
| CCATCACAAATAGAAACCGA+TGG | - | chr2_3:6514123-6514142 | None:intergenic | 40.0% | |
| !! | CCATCGGTTTCTATTTGTGA+TGG | + | chr2_3:6514120-6514139 | Msa0274650:intron | 40.0% |
| GTTAAGATGGAGGGAAAAAC+CGG | - | chr2_3:6514422-6514441 | None:intergenic | 40.0% | |
| GGCTTGTAGTCCAAAAAGAA+AGG | - | chr2_3:6514613-6514632 | None:intergenic | 40.0% | |
| GACTACAAGCCTGTTTGAAT+TGG | + | chr2_3:6514622-6514641 | Msa0274650:three_prime_UTR | 40.0% | |
| AGGGAAAGGGAAAGTAAGGT+TGG | - | chr2_3:6510427-6510446 | None:intergenic | 45.0% | |
| TTGGAGGGAAAGGGAAAGTA+AGG | - | chr2_3:6510431-6510450 | None:intergenic | 45.0% | |
| ! | CATGAAGTTGGTCCATTGGT+GGG | - | chr2_3:6510602-6510621 | None:intergenic | 45.0% |
| ! | ATGCCATGAAGTTGGTCCAT+TGG | - | chr2_3:6510606-6510625 | None:intergenic | 45.0% |
| GCATAGATGCAAACCCTTCT+TGG | + | chr2_3:6510634-6510653 | Msa0274650:CDS | 45.0% | |
| GTGGATACTAACCCCAAGAA+GGG | - | chr2_3:6510650-6510669 | None:intergenic | 45.0% | |
| AGTGGATACTAACCCCAAGA+AGG | - | chr2_3:6510651-6510670 | None:intergenic | 45.0% | |
| GAAAATGCAGAGGAGGAAAG+TGG | - | chr2_3:6510669-6510688 | None:intergenic | 45.0% | |
| TTTCTTGTGCCTTTGATGGG+TGG | + | chr2_3:6510919-6510938 | Msa0274650:CDS | 45.0% | |
| ACATCAGTTCCACCCATCAA+AGG | - | chr2_3:6510931-6510950 | None:intergenic | 45.0% | |
| TCAGGGTGATAAAGTGAGAG+TGG | + | chr2_3:6511116-6511135 | Msa0274650:intron | 45.0% | |
| AACTCGGTTACCAACAGTGA+TGG | + | chr2_3:6511194-6511213 | Msa0274650:CDS | 45.0% | |
| ACTCGGTTACCAACAGTGAT+GGG | + | chr2_3:6511195-6511214 | Msa0274650:CDS | 45.0% | |
| ! | GGGAGGGTCTTATGCATTTA+TGG | + | chr2_3:6511215-6511234 | Msa0274650:CDS | 45.0% |
| GTCTTCTATGGAGGCCAATT+TGG | - | chr2_3:6511268-6511287 | None:intergenic | 45.0% | |
| CAAATGTGGGTCTTCTATGG+AGG | - | chr2_3:6511277-6511296 | None:intergenic | 45.0% | |
| CTCCATAGAAGACCCACATT+TGG | + | chr2_3:6511275-6511294 | Msa0274650:CDS | 45.0% | |
| !! | GTTTACTTTAGGGCAGGGTT+TGG | - | chr2_3:6511420-6511439 | None:intergenic | 45.0% |
| !! | TCCAGGTTTTTCAGTCCACT+TGG | + | chr2_3:6512021-6512040 | Msa0274650:intron | 45.0% |
| !! | TCCAAGTGGACTGAAAAACC+TGG | - | chr2_3:6512025-6512044 | None:intergenic | 45.0% |
| GTGAACTATTGTCGTACCAC+AGG | - | chr2_3:6512099-6512118 | None:intergenic | 45.0% | |
| TGCATAGGCCCATATCATTG+TGG | - | chr2_3:6512443-6512462 | None:intergenic | 45.0% | |
| TGGAGCAGAAGAAATGAGGT+TGG | - | chr2_3:6512539-6512558 | None:intergenic | 45.0% | |
| ACCTCATTTCTTCTGCTCCA+TGG | + | chr2_3:6512539-6512558 | Msa0274650:CDS | 45.0% | |
| ACCATGGAGCAGAAGAAATG+AGG | - | chr2_3:6512543-6512562 | None:intergenic | 45.0% | |
| TCAACAAGGGACAAACTCAC+TGG | - | chr2_3:6512643-6512662 | None:intergenic | 45.0% | |
| AAACCCCACTCAAAAGGGTA+TGG | - | chr2_3:6512716-6512735 | None:intergenic | 45.0% | |
| GTAGGAAAACCCCACTCAAA+AGG | - | chr2_3:6512722-6512741 | None:intergenic | 45.0% | |
| ! | TGGTCATGCTTTTGGCATGA+TGG | + | chr2_3:6512751-6512770 | Msa0274650:CDS | 45.0% |
| ! | GGACTATTTGGAACACTGAC+TGG | + | chr2_3:6513180-6513199 | Msa0274650:CDS | 45.0% |
| ! | TGGAACACTGACTGGTTCAT+CGG | + | chr2_3:6513188-6513207 | Msa0274650:CDS | 45.0% |
| AGAGAGAATGTAGGGCTTCT+AGG | + | chr2_3:6513294-6513313 | Msa0274650:intron | 45.0% | |
| !! | CTTCTAGGAAGTACTCGTGT+TGG | + | chr2_3:6513309-6513328 | Msa0274650:CDS | 45.0% |
| GCTATGTACTGTGTCCTGTT+TGG | + | chr2_3:6513555-6513574 | Msa0274650:CDS | 45.0% | |
| ! | CATCTAGCCTTTGTATGAGC+AGG | - | chr2_3:6513808-6513827 | None:intergenic | 45.0% |
| CTGCTCATACAAAGGCTAGA+TGG | + | chr2_3:6513806-6513825 | Msa0274650:CDS | 45.0% | |
| CATATGCATGCACATGCCTT+AGG | + | chr2_3:6513881-6513900 | Msa0274650:intron | 45.0% | |
| ACGGAACAGTTATGCACCAT+CGG | + | chr2_3:6514104-6514123 | Msa0274650:intron | 45.0% | |
| ! | GTTCTAAACTTGGTCCACCA+TGG | - | chr2_3:6514345-6514364 | None:intergenic | 45.0% |
| AAAAACCGGTGGAGGTTGAA+AGG | - | chr2_3:6514408-6514427 | None:intergenic | 45.0% | |
| !!! | TTATTTTTTTCATTATATAA+TGG | + | chr2_3:6510712-6510731 | Msa0274650:intron | 5.0% |
| ! | CCATGAAGTTGGTCCATTGG+TGG | - | chr2_3:6510603-6510622 | None:intergenic | 50.0% |
| CCACCAATGGACCAACTTCA+TGG | + | chr2_3:6510600-6510619 | Msa0274650:CDS | 50.0% | |
| ! | GGTTACCAACAGTGATGGGA+GGG | + | chr2_3:6511199-6511218 | Msa0274650:CDS | 50.0% |
| TAAGACCCTCCCATCACTGT+TGG | - | chr2_3:6511207-6511226 | None:intergenic | 50.0% | |
| GAGTTCGGCCAATTGTGTCT+TGG | + | chr2_3:6511478-6511497 | Msa0274650:intron | 50.0% | |
| TGCACCTTGAACTGCTCTCA+TGG | - | chr2_3:6511859-6511878 | None:intergenic | 50.0% | |
| ATTTAACCGAGGGTTCCCTG+TGG | + | chr2_3:6512080-6512099 | Msa0274650:CDS | 50.0% | |
| GCCCTACATTCTCTCTGTCA+TGG | - | chr2_3:6513290-6513309 | None:intergenic | 50.0% | |
| !! | TGTGTCCTGTTTGGCCTTGT+TGG | + | chr2_3:6513564-6513583 | Msa0274650:CDS | 50.0% |
| ACTCACCAACAAGGCCAAAC+AGG | - | chr2_3:6513572-6513591 | None:intergenic | 50.0% | |
| TTCACTTCCAAGGCCCTTCA+TGG | + | chr2_3:6513781-6513800 | Msa0274650:CDS | 50.0% | |
| TGTATGAGCAGGGCCATGAA+GGG | - | chr2_3:6513797-6513816 | None:intergenic | 50.0% | |
| TTGTATGAGCAGGGCCATGA+AGG | - | chr2_3:6513798-6513817 | None:intergenic | 50.0% | |
| TCATGGCCCTGCTCATACAA+AGG | + | chr2_3:6513798-6513817 | Msa0274650:CDS | 50.0% | |
| ATGCATGCACATGCCTTAGG+TGG | + | chr2_3:6513884-6513903 | Msa0274650:intron | 50.0% | |
| CCATGGCATTCCCCTATCTT+TGG | - | chr2_3:6514328-6514347 | None:intergenic | 50.0% | |
| CCAAAGATAGGGGAATGCCA+TGG | + | chr2_3:6514325-6514344 | Msa0274650:CDS | 50.0% | |
| AAGATAGGGGAATGCCATGG+TGG | + | chr2_3:6514328-6514347 | Msa0274650:CDS | 50.0% | |
| AAGATGGAGGGAAAAACCGG+TGG | - | chr2_3:6514419-6514438 | None:intergenic | 50.0% | |
| ! | GAAGTTGGTCCATTGGTGGG+TGG | - | chr2_3:6510599-6510618 | None:intergenic | 55.0% |
| ! | CGGTTACCAACAGTGATGGG+AGG | + | chr2_3:6511198-6511217 | Msa0274650:CDS | 55.0% |
| ! | TGGCATGATGGCCGCTGTTT+TGG | + | chr2_3:6512763-6512782 | Msa0274650:CDS | 55.0% |
| CCGGTGGAGGTTGAAAGGAA+GGG | - | chr2_3:6514403-6514422 | None:intergenic | 55.0% | |
| CCCTTCCTTTCAACCTCCAC+CGG | + | chr2_3:6514400-6514419 | Msa0274650:CDS | 55.0% | |
| ACCGGTGGAGGTTGAAAGGA+AGG | - | chr2_3:6514404-6514423 | None:intergenic | 55.0% | |
| ATGGAGGGAAAAACCGGTGG+AGG | - | chr2_3:6514416-6514435 | None:intergenic | 55.0% | |
| GTCGTACCACAGGGAACCCT+CGG | - | chr2_3:6512089-6512108 | None:intergenic | 60.0% | |
| GAGCATACACAGCTGCGTCC+CGG | + | chr2_3:6513079-6513098 | Msa0274650:CDS | 60.0% | |
| !! | CGGTGTTGCACTTGCTAGCC+GGG | - | chr2_3:6513100-6513119 | None:intergenic | 60.0% |
| !! | GCGGTGTTGCACTTGCTAGC+CGG | - | chr2_3:6513101-6513120 | None:intergenic | 60.0% |
| CTCAGAACATGAGGAGGCGG+CGG | - | chr2_3:6513120-6513139 | None:intergenic | 60.0% | |
| CGGCTCAGAACATGAGGAGG+CGG | - | chr2_3:6513123-6513142 | None:intergenic | 60.0% | |
| ! | CCTCCTCATGTTCTGAGCCG+CGG | + | chr2_3:6513123-6513142 | Msa0274650:CDS | 60.0% |
| ACACCGCGGCTCAGAACATG+AGG | - | chr2_3:6513129-6513148 | None:intergenic | 60.0% | |
| ! | CATGTTCTGAGCCGCGGTGT+TGG | + | chr2_3:6513129-6513148 | Msa0274650:CDS | 60.0% |
| !! | GGTGTTGGCTGGCAGGGAAT+TGG | + | chr2_3:6513144-6513163 | Msa0274650:CDS | 60.0% |
| CCGCGGCTCAGAACATGAGG+AGG | - | chr2_3:6513126-6513145 | None:intergenic | 65.0% | |
| !! | TTCTGAGCCGCGGTGTTGGC+TGG | + | chr2_3:6513133-6513152 | Msa0274650:CDS | 65.0% |
| TTCCCTGCCAGCCAACACCG+CGG | - | chr2_3:6513143-6513162 | None:intergenic | 65.0% | |
| AGCAGGGCCATGAAGGGCCT+TGG | - | chr2_3:6513791-6513810 | None:intergenic | 65.0% | |
| !! | AGCCGCGGTGTTGGCTGGCA+GGG | + | chr2_3:6513138-6513157 | Msa0274650:CDS | 70.0% |
| !! | GAGCCGCGGTGTTGGCTGGC+AGG | + | chr2_3:6513137-6513156 | Msa0274650:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 6510339 | 6514761 | 6510339 | ID=Msa0274650;Name=Msa0274650 |
| chr2_3 | mRNA | 6510339 | 6514761 | 6510339 | ID=Msa0274650-mRNA-1;Parent=Msa0274650;Name=Msa0274650-mRNA-1;_AED=0.13;_eAED=0.13;_QI=225|1|1|1|1|1|13|321|525 |
| chr2_3 | exon | 6510339 | 6510657 | 6510339 | ID=Msa0274650-mRNA-1:exon:3069;Parent=Msa0274650-mRNA-1 |
| chr2_3 | exon | 6510851 | 6510948 | 6510851 | ID=Msa0274650-mRNA-1:exon:3070;Parent=Msa0274650-mRNA-1 |
| chr2_3 | exon | 6511120 | 6511296 | 6511120 | ID=Msa0274650-mRNA-1:exon:3071;Parent=Msa0274650-mRNA-1 |
| chr2_3 | exon | 6511843 | 6511943 | 6511843 | ID=Msa0274650-mRNA-1:exon:3072;Parent=Msa0274650-mRNA-1 |
| chr2_3 | exon | 6512026 | 6512101 | 6512026 | ID=Msa0274650-mRNA-1:exon:3073;Parent=Msa0274650-mRNA-1 |
| chr2_3 | exon | 6512201 | 6512260 | 6512201 | ID=Msa0274650-mRNA-1:exon:3074;Parent=Msa0274650-mRNA-1 |
| chr2_3 | exon | 6512376 | 6512560 | 6512376 | ID=Msa0274650-mRNA-1:exon:3075;Parent=Msa0274650-mRNA-1 |
| chr2_3 | exon | 6512703 | 6512799 | 6512703 | ID=Msa0274650-mRNA-1:exon:3076;Parent=Msa0274650-mRNA-1 |
| chr2_3 | exon | 6513072 | 6513217 | 6513072 | ID=Msa0274650-mRNA-1:exon:3077;Parent=Msa0274650-mRNA-1 |
| chr2_3 | exon | 6513296 | 6513387 | 6513296 | ID=Msa0274650-mRNA-1:exon:3078;Parent=Msa0274650-mRNA-1 |
| chr2_3 | exon | 6513508 | 6513585 | 6513508 | ID=Msa0274650-mRNA-1:exon:3079;Parent=Msa0274650-mRNA-1 |
| chr2_3 | exon | 6513668 | 6513828 | 6513668 | ID=Msa0274650-mRNA-1:exon:3080;Parent=Msa0274650-mRNA-1 |
| chr2_3 | exon | 6514228 | 6514761 | 6514228 | ID=Msa0274650-mRNA-1:exon:3081;Parent=Msa0274650-mRNA-1 |
| chr2_3 | five_prime_UTR | 6510339 | 6510563 | 6510339 | ID=Msa0274650-mRNA-1:five_prime_utr;Parent=Msa0274650-mRNA-1 |
| chr2_3 | CDS | 6510564 | 6510657 | 6510564 | ID=Msa0274650-mRNA-1:cds;Parent=Msa0274650-mRNA-1 |
| chr2_3 | CDS | 6510851 | 6510948 | 6510851 | ID=Msa0274650-mRNA-1:cds;Parent=Msa0274650-mRNA-1 |
| chr2_3 | CDS | 6511120 | 6511296 | 6511120 | ID=Msa0274650-mRNA-1:cds;Parent=Msa0274650-mRNA-1 |
| chr2_3 | CDS | 6511843 | 6511943 | 6511843 | ID=Msa0274650-mRNA-1:cds;Parent=Msa0274650-mRNA-1 |
| chr2_3 | CDS | 6512026 | 6512101 | 6512026 | ID=Msa0274650-mRNA-1:cds;Parent=Msa0274650-mRNA-1 |
| chr2_3 | CDS | 6512201 | 6512260 | 6512201 | ID=Msa0274650-mRNA-1:cds;Parent=Msa0274650-mRNA-1 |
| chr2_3 | CDS | 6512376 | 6512560 | 6512376 | ID=Msa0274650-mRNA-1:cds;Parent=Msa0274650-mRNA-1 |
| chr2_3 | CDS | 6512703 | 6512799 | 6512703 | ID=Msa0274650-mRNA-1:cds;Parent=Msa0274650-mRNA-1 |
| chr2_3 | CDS | 6513072 | 6513217 | 6513072 | ID=Msa0274650-mRNA-1:cds;Parent=Msa0274650-mRNA-1 |
| chr2_3 | CDS | 6513296 | 6513387 | 6513296 | ID=Msa0274650-mRNA-1:cds;Parent=Msa0274650-mRNA-1 |
| chr2_3 | CDS | 6513508 | 6513585 | 6513508 | ID=Msa0274650-mRNA-1:cds;Parent=Msa0274650-mRNA-1 |
| chr2_3 | CDS | 6513668 | 6513828 | 6513668 | ID=Msa0274650-mRNA-1:cds;Parent=Msa0274650-mRNA-1 |
| chr2_3 | CDS | 6514228 | 6514440 | 6514228 | ID=Msa0274650-mRNA-1:cds;Parent=Msa0274650-mRNA-1 |
| chr2_3 | three_prime_UTR | 6514441 | 6514761 | 6514441 | ID=Msa0274650-mRNA-1:three_prime_utr;Parent=Msa0274650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
