Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0256480 | XP_013464719.1 | 98.955 | 574 | 6 | 0 | 1 | 574 | 1 | 574 | 0.0 | 1180 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0256480 | sp|A2XGQ1|NUG2_ORYSI | 74.813 | 536 | 121 | 5 | 1 | 525 | 1 | 533 | 0.0 | 831 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0256480 | A0A072V9N1 | 98.955 | 574 | 6 | 0 | 1 | 574 | 1 | 574 | 0.0 | 1180 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0028930 | Msa0256480 | 0.801507 | 8.715258e-49 | -8.615850e-47 |
| Msa0106620 | Msa0256480 | 0.810466 | 1.136953e-50 | -8.615850e-47 |
| Msa0124450 | Msa0256480 | 0.810250 | 1.265372e-50 | -8.615850e-47 |
| Msa0127100 | Msa0256480 | 0.814131 | 1.801397e-51 | -8.615850e-47 |
| Msa0231190 | Msa0256480 | 0.815705 | 8.062158e-52 | -8.615850e-47 |
| Msa0232360 | Msa0256480 | 0.811799 | 5.842374e-51 | -8.615850e-47 |
| Msa0256480 | Msa0450400 | -0.804637 | 1.963457e-49 | -8.615850e-47 |
| Msa0256480 | Msa0476680 | 0.800969 | 1.122884e-48 | -8.615850e-47 |
| Msa0256480 | Msa0672550 | 0.836266 | 1.035198e-56 | -8.615850e-47 |
| Msa0256480 | Msa0783860 | 0.807482 | 4.947294e-50 | -8.615850e-47 |
| Msa0256480 | Msa0812090 | 0.805817 | 1.111370e-49 | -8.615850e-47 |
| Msa0256480 | Msa0822500 | 0.809775 | 1.601299e-50 | -8.615850e-47 |
| Msa0256480 | Msa0934140 | 0.807437 | 5.056472e-50 | -8.615850e-47 |
| Msa0256480 | Msa1034500 | 0.805306 | 1.422957e-49 | -8.615850e-47 |
| Msa0256480 | Msa1226270 | 0.803778 | 2.963966e-49 | -8.615850e-47 |
| Msa0256480 | Msa1450720 | 0.807634 | 4.592194e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0256480 | MtrunA17_Chr2g0317811 | 98.955 | 574 | 6 | 0 | 1 | 574 | 1 | 574 | 0.0 | 1180 |
| Msa0256480 | MtrunA17_Chr4g0042571 | 88.256 | 562 | 48 | 3 | 1 | 552 | 1 | 554 | 0.0 | 993 |
| Msa0256480 | MtrunA17_Chr1g0170031 | 34.596 | 396 | 226 | 7 | 197 | 566 | 125 | 513 | 1.13e-59 | 208 |
| Msa0256480 | MtrunA17_Chr4g0025451 | 30.422 | 332 | 159 | 9 | 193 | 460 | 150 | 473 | 6.59e-34 | 136 |
| Msa0256480 | MtrunA17_Chr5g0397611 | 71.622 | 74 | 21 | 0 | 7 | 80 | 14 | 87 | 6.99e-29 | 109 |
| Msa0256480 | MtrunA17_Chr7g0259841 | 26.354 | 277 | 170 | 9 | 206 | 461 | 110 | 373 | 1.28e-15 | 79.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0256480 | AT1G52980.1 | 73.322 | 566 | 140 | 4 | 4 | 561 | 3 | 565 | 0.0 | 821 |
| Msa0256480 | AT3G07050.1 | 32.468 | 385 | 232 | 5 | 182 | 539 | 105 | 488 | 2.92e-63 | 218 |
| Msa0256480 | AT2G27200.1 | 29.412 | 323 | 171 | 7 | 193 | 460 | 149 | 469 | 8.39e-37 | 144 |
| Msa0256480 | AT1G08410.1 | 28.235 | 340 | 180 | 8 | 193 | 473 | 149 | 483 | 6.10e-36 | 142 |
| Msa0256480 | AT4G02790.1 | 28.253 | 269 | 161 | 8 | 206 | 455 | 109 | 364 | 9.70e-18 | 85.9 |
Find 167 sgRNAs with CRISPR-Local
Find 355 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACATTTGCAATAGCTTTAA+TGG | 0.156377 | 2_2:+51243155 | None:intergenic |
| AAATGCATCAATTATGCTTT+TGG | 0.190939 | 2_2:-51242744 | Msa0256480:three_prime_UTR |
| AATGGCCGCAAGGTGGAATT+AGG | 0.211132 | 2_2:+51247928 | None:intergenic |
| CCAATACTGTTATAAGATTT+AGG | 0.238930 | 2_2:+51247979 | None:intergenic |
| CAGTTGCGGGTTTAGCTGTT+AGG | 0.243960 | 2_2:-51242894 | Msa0256480:three_prime_UTR |
| TTTGTTTATCACCTGGTCTT+TGG | 0.288271 | 2_2:-51242681 | Msa0256480:three_prime_UTR |
| TCTGGTGGATGGAAGCTCTT+TGG | 0.292827 | 2_2:+51247706 | None:intergenic |
| ATATTATATCTTAGTTATAA+TGG | 0.297578 | 2_2:+51242567 | None:intergenic |
| GTTGGAGTGCTTTGGTTTAC+CGG | 0.301059 | 2_2:+51247856 | None:intergenic |
| CTGGTACATTTCTTTGCTGC+TGG | 0.301939 | 2_2:+51243124 | None:intergenic |
| TTGACGATCTGGTTTGATTC+TGG | 0.314170 | 2_2:+51247688 | None:intergenic |
| TAATTACAATATTATTCTTA+AGG | 0.328853 | 2_2:-51247493 | Msa0256480:CDS |
| TCCGAGGAGCCTAATGTTAA+TGG | 0.329718 | 2_2:-51243222 | Msa0256480:CDS |
| TGCAAGGTTGCTCCAATTCC+AGG | 0.333863 | 2_2:-51245262 | Msa0256480:CDS |
| GAAACTGCTGACCAACTTCC+AGG | 0.340517 | 2_2:-51243063 | Msa0256480:CDS |
| AAGAAAGCGACCAAGTCTTT+TGG | 0.342972 | 2_2:-51247273 | Msa0256480:CDS |
| GAAACTCATGATTCACTTGT+TGG | 0.343827 | 2_2:+51242916 | None:intergenic |
| AGCGGAACGCTTCTCGGTCT+TGG | 0.349743 | 2_2:+51247811 | None:intergenic |
| ACTGATGACTTCCCAACATT+TGG | 0.350955 | 2_2:+51245466 | None:intergenic |
| TTTGAAGAGAAGCATGCTTC+TGG | 0.358421 | 2_2:-51246618 | Msa0256480:CDS |
| AATTACAATATTATTCTTAA+GGG | 0.359879 | 2_2:-51247492 | Msa0256480:CDS |
| AAAACGGAATAGATATTTAC+TGG | 0.363564 | 2_2:-51248027 | Msa0256480:five_prime_UTR |
| GCAAGTATTAACAAGTCCTT+TGG | 0.366903 | 2_2:-51245748 | Msa0256480:CDS |
| GAGCCTTTCTCCGATGCATT+TGG | 0.371646 | 2_2:-51247308 | Msa0256480:CDS |
| ATCATCTGGCAAACTCCTTA+AGG | 0.385274 | 2_2:-51243699 | Msa0256480:intron |
| TAAAGAAGATGCAGCGGAAA+TGG | 0.390262 | 2_2:+51242817 | None:intergenic |
| GCAATATCTGTTGGTTTCGT+TGG | 0.394302 | 2_2:-51245493 | Msa0256480:CDS |
| GTTTCAAAACCTCGCCTATA+TGG | 0.397582 | 2_2:+51244134 | None:intergenic |
| GGTGGCAGCGGAACGCTTCT+CGG | 0.403368 | 2_2:+51247805 | None:intergenic |
| ATGGCCGCAAGGTGGAATTA+GGG | 0.408939 | 2_2:+51247929 | None:intergenic |
| GAATCATGAGTTTCAGTTGC+GGG | 0.414469 | 2_2:-51242907 | Msa0256480:exon |
| TATAAATGAAGCTTCAGTTA+TGG | 0.417229 | 2_2:-51242704 | Msa0256480:three_prime_UTR |
| AGACAAATGAAGTTCAGAAA+TGG | 0.424139 | 2_2:+51242781 | None:intergenic |
| CTTCAGCTTTGCAAATCATC+TGG | 0.430614 | 2_2:-51243713 | Msa0256480:CDS |
| TGCTTAGGGTTCACTTCTAT+CGG | 0.432048 | 2_2:-51245554 | Msa0256480:intron |
| ACATCTATGCCATTAACATT+AGG | 0.435407 | 2_2:+51243213 | None:intergenic |
| ATACCGAACCATTGACGATC+TGG | 0.435791 | 2_2:+51247677 | None:intergenic |
| AGGCTCCTCGGACTCGGATA+AGG | 0.435926 | 2_2:+51243233 | None:intergenic |
| CGCTGCATCTTCTTTAACAA+AGG | 0.437183 | 2_2:-51242810 | Msa0256480:three_prime_UTR |
| TTGGCGTCGTTGGAGTGCTT+TGG | 0.439185 | 2_2:+51247848 | None:intergenic |
| AAAGATGCTGCTGACCATAT+AGG | 0.439860 | 2_2:-51244148 | Msa0256480:CDS |
| TGGCAGCAGATGCCTGGTTA+TGG | 0.442559 | 2_2:+51243175 | None:intergenic |
| TTCTTCAGATGTTGTTGTCC+AGG | 0.442566 | 2_2:-51246484 | Msa0256480:intron |
| CTTACGGTTACGAACGGGTC+GGG | 0.448708 | 2_2:+51247757 | None:intergenic |
| TTAGCTGTTAGGGTTTATGT+TGG | 0.450799 | 2_2:-51242883 | Msa0256480:three_prime_UTR |
| CCTAAATCTTATAACAGTAT+TGG | 0.450870 | 2_2:-51247979 | Msa0256480:five_prime_UTR |
| AGGGTCAAAGCAAACGCATA+TGG | 0.452368 | 2_2:-51246530 | Msa0256480:CDS |
| TCATCTTTGCTGCGGTCATA+AGG | 0.452623 | 2_2:+51243316 | None:intergenic |
| CAAAGAAATGTACCAGTTCA+AGG | 0.453415 | 2_2:-51243117 | Msa0256480:CDS |
| TTCGTTGGATATCCAAATGT+TGG | 0.461045 | 2_2:-51245478 | Msa0256480:CDS |
| AGTTGCGGGTTTAGCTGTTA+GGG | 0.461398 | 2_2:-51242893 | Msa0256480:three_prime_UTR |
| AAACTCATGATTCACTTGTT+GGG | 0.461628 | 2_2:+51242917 | None:intergenic |
| AACATTAGGCTCCTCGGACT+CGG | 0.463283 | 2_2:+51243227 | None:intergenic |
| GCGACATACCATGTTTGAAA+AGG | 0.465171 | 2_2:-51246550 | Msa0256480:CDS |
| TCTGTATAATCCCCAGTGCC+TGG | 0.466835 | 2_2:+51243045 | None:intergenic |
| TTATATAAATCCCCTTGAAC+TGG | 0.467150 | 2_2:+51243105 | None:intergenic |
| TGGTACATTTCTTTGCTGCT+GGG | 0.469996 | 2_2:+51243125 | None:intergenic |
| GCTGACCAACTTCCAGGCAC+TGG | 0.471613 | 2_2:-51243057 | Msa0256480:CDS |
| GGGTCAAAGCAAACGCATAT+GGG | 0.476137 | 2_2:-51246529 | Msa0256480:CDS |
| GTGGATGGATCCTGCTCAGA+TGG | 0.476614 | 2_2:+51242979 | None:intergenic |
| CTGACCAACTTCCAGGCACT+GGG | 0.477985 | 2_2:-51243056 | Msa0256480:CDS |
| AGCACTCCAACGACGCCAAT+CGG | 0.479185 | 2_2:-51247844 | Msa0256480:CDS |
| CTTTAATGGCAGCAGATGCC+TGG | 0.480035 | 2_2:+51243169 | None:intergenic |
| TCGTTGGATATCCAAATGTT+GGG | 0.481119 | 2_2:-51245477 | Msa0256480:CDS |
| CTTGGAGTCATTGCTCCGAT+TGG | 0.485851 | 2_2:+51247829 | None:intergenic |
| GTGCGATCTAATTCCTGCTT+GGG | 0.492181 | 2_2:-51245827 | Msa0256480:CDS |
| AAGGCATCCTGTCGCGGAGG+AGG | 0.493757 | 2_2:+51243252 | None:intergenic |
| TTCCAGGGGAAACAAAAGTC+TGG | 0.495795 | 2_2:-51245246 | Msa0256480:CDS |
| GGTCCAAATGCATCGGAGAA+AGG | 0.498114 | 2_2:+51247305 | None:intergenic |
| CACTGAGGTCCCATCTGAGC+AGG | 0.498975 | 2_2:-51242989 | Msa0256480:CDS |
| ATTCCTGCTTGGGCAACAAA+AGG | 0.500766 | 2_2:-51245817 | Msa0256480:CDS |
| CAAGGTGGAATTAGGGTTTG+TGG | 0.500994 | 2_2:+51247936 | None:intergenic |
| TGACCCTTACGGTTACGAAC+GGG | 0.505883 | 2_2:+51247752 | None:intergenic |
| AGTGCGATCTAATTCCTGCT+TGG | 0.506473 | 2_2:-51245828 | Msa0256480:CDS |
| TTTGCTGCGGTCATAAGGTC+AGG | 0.508113 | 2_2:+51243321 | None:intergenic |
| AAACCAGATCGTCAATGGTT+CGG | 0.508424 | 2_2:-51247680 | Msa0256480:intron |
| TTGTTGTGGTAGACAACTCC+TGG | 0.509529 | 2_2:+51245181 | None:intergenic |
| GCAGAAATAAGCTGCTCAGA+TGG | 0.511340 | 2_2:+51242949 | None:intergenic |
| TACTCAAGACATGACCCTTA+CGG | 0.515858 | 2_2:+51247741 | None:intergenic |
| ATTGCTCCGATTGGCGTCGT+TGG | 0.517967 | 2_2:+51247838 | None:intergenic |
| GAGCGAAACGTTAACCTCTC+CGG | 0.518412 | 2_2:-51247875 | Msa0256480:CDS |
| CGACATACCATGTTTGAAAA+GGG | 0.520906 | 2_2:-51246549 | Msa0256480:CDS |
| GTTATGGTTTGTTTATCACC+TGG | 0.521365 | 2_2:-51242688 | Msa0256480:three_prime_UTR |
| GCAGCTTATTTCTGCTGAGC+CGG | 0.521792 | 2_2:-51242941 | Msa0256480:CDS |
| CATGATTCACTTGTTGGGAC+CGG | 0.522319 | 2_2:+51242922 | None:intergenic |
| GAGACGGCGGACGGTGGCAG+CGG | 0.523409 | 2_2:+51247793 | None:intergenic |
| GAATCAAACCAGATCGTCAA+TGG | 0.524108 | 2_2:-51247685 | Msa0256480:CDS |
| GCCATTAACATTAGGCTCCT+CGG | 0.526368 | 2_2:+51243221 | None:intergenic |
| CTGCTTGGGCAACAAAAGGA+TGG | 0.530434 | 2_2:-51245813 | Msa0256480:CDS |
| ACTGTTATAAGATTTAGGCT+TGG | 0.533027 | 2_2:+51247984 | None:intergenic |
| AATCCCCAGTGCCTGGAAGT+TGG | 0.535162 | 2_2:+51243052 | None:intergenic |
| GAGCTTATAAAATAAAAGAA+TGG | 0.536265 | 2_2:-51244087 | Msa0256480:intron |
| ACGATCTGGTTTGATTCTGG+TGG | 0.539746 | 2_2:+51247691 | None:intergenic |
| TTGAATATTGTAGCAATCGA+GGG | 0.540439 | 2_2:-51247348 | Msa0256480:intron |
| GATAAGCAAGCAATATCTGT+TGG | 0.542451 | 2_2:-51245502 | Msa0256480:CDS |
| AGTCTTAGGTCCAAATGCAT+CGG | 0.546186 | 2_2:+51247298 | None:intergenic |
| TAATCAGAAGCCAAAAGACT+TGG | 0.549503 | 2_2:+51247263 | None:intergenic |
| TGATACTTCACGATTGGCAG+AGG | 0.551420 | 2_2:-51243296 | Msa0256480:CDS |
| CAAAGATGATACTTCACGAT+TGG | 0.552750 | 2_2:-51243302 | Msa0256480:CDS |
| TTTGAATATTGTAGCAATCG+AGG | 0.553512 | 2_2:-51247349 | Msa0256480:intron |
| GCAAGGTTGCTCCAATTCCA+GGG | 0.553714 | 2_2:-51245261 | Msa0256480:CDS |
| TGAAACAGATGTTGTGCTGA+AGG | 0.557161 | 2_2:-51245152 | Msa0256480:CDS |
| AGGACTTGTTAATACTTGCA+TGG | 0.558229 | 2_2:+51245752 | None:intergenic |
| AGATTTAGGCTTGGCTTACG+TGG | 0.562232 | 2_2:+51247993 | None:intergenic |
| TCTGGTTTGATTCTGGTGGA+TGG | 0.563288 | 2_2:+51247695 | None:intergenic |
| ATGATTTGCAAAGCTGAAGT+AGG | 0.563324 | 2_2:+51243717 | None:intergenic |
| TGATACAGGTTATAGATGCA+AGG | 0.563934 | 2_2:-51246041 | Msa0256480:intron |
| AAGAAAGCTGATGGTTCTCA+AGG | 0.565803 | 2_2:-51247227 | Msa0256480:intron |
| CAATGTGTCATAGGTTTGCA+AGG | 0.567384 | 2_2:-51245278 | Msa0256480:intron |
| CATTCTTCGTATCTCTGCAA+TGG | 0.569221 | 2_2:-51247909 | Msa0256480:exon |
| AAAGAAATGTACCAGTTCAA+GGG | 0.570482 | 2_2:-51243116 | Msa0256480:CDS |
| CATTGCAGAGATACGAAGAA+TGG | 0.571184 | 2_2:+51247910 | None:intergenic |
| TAATCATTAAGAAGCGACAT+AGG | 0.571596 | 2_2:+51247459 | None:intergenic |
| TGATAACATCTTGTGCCTTG+TGG | 0.576348 | 2_2:+51246015 | None:intergenic |
| CTTGCATGGAATGCTAGCGT+TGG | 0.576468 | 2_2:+51245766 | None:intergenic |
| TCAGATGGGACCTCAGTGGA+TGG | 0.578068 | 2_2:+51242994 | None:intergenic |
| TATTAACAAGTCCTTTGGAA+AGG | 0.579655 | 2_2:-51245743 | Msa0256480:intron |
| AGGCATCCTGTCGCGGAGGA+GGG | 0.580734 | 2_2:+51243253 | None:intergenic |
| ATTACAATATTATTCTTAAG+GGG | 0.583366 | 2_2:-51247491 | Msa0256480:CDS |
| GCTGAAGCTGATGAAGCAGA+TGG | 0.585177 | 2_2:-51246588 | Msa0256480:CDS |
| CAAGGTTGCTCCAATTCCAG+GGG | 0.586597 | 2_2:-51245260 | Msa0256480:CDS |
| CCGACCCGTTCGTAACCGTA+AGG | 0.586850 | 2_2:-51247756 | Msa0256480:CDS |
| TGAAGACAGTGACGCATCTG+AGG | 0.587822 | 2_2:-51243022 | Msa0256480:CDS |
| TCTTTAGCTAAGAAAGCTGA+TGG | 0.590099 | 2_2:-51247236 | Msa0256480:CDS |
| GCTTCTTAATGATTATCAGA+AGG | 0.590205 | 2_2:-51247451 | Msa0256480:intron |
| GTACATCTTGAGACGGCGGA+CGG | 0.590589 | 2_2:+51247784 | None:intergenic |
| AATAGATATTTACTGGTAGT+CGG | 0.593088 | 2_2:-51248020 | Msa0256480:five_prime_UTR |
| AGTGCTTTGGTTTACCGGAG+AGG | 0.596572 | 2_2:+51247861 | None:intergenic |
| GATACAGGTTATAGATGCAA+GGG | 0.598294 | 2_2:-51246040 | Msa0256480:intron |
| TGGATGGATCCTGCTCAGAT+GGG | 0.599401 | 2_2:+51242980 | None:intergenic |
| AGAGAAGCATGCTTCTGGTA+CGG | 0.604819 | 2_2:-51246613 | Msa0256480:CDS |
| GATACTTCACGATTGGCAGA+GGG | 0.606800 | 2_2:-51243295 | Msa0256480:CDS |
| CTGCTCAGATGGAACATCAG+TGG | 0.617367 | 2_2:+51242960 | None:intergenic |
| AAGAAATGTACCAGTTCAAG+GGG | 0.617586 | 2_2:-51243115 | Msa0256480:CDS |
| AGATGTTGTGCTGAAGGGTG+TGG | 0.624230 | 2_2:-51245146 | Msa0256480:intron |
| GAAACAGATGTTGTGCTGAA+GGG | 0.627938 | 2_2:-51245151 | Msa0256480:CDS |
| TGAATCATGAGTTTCAGTTG+CGG | 0.629227 | 2_2:-51242908 | Msa0256480:exon |
| TCGGATAAGGCATCCTGTCG+CGG | 0.632895 | 2_2:+51243246 | None:intergenic |
| CTGTTTCAGAGTCATTGTTG+TGG | 0.635053 | 2_2:+51245167 | None:intergenic |
| CCTTACGGTTACGAACGGGT+CGG | 0.635620 | 2_2:+51247756 | None:intergenic |
| GGTCAAAGCAAACGCATATG+GGG | 0.635960 | 2_2:-51246528 | Msa0256480:CDS |
| ATGACCCTTACGGTTACGAA+CGG | 0.636046 | 2_2:+51247751 | None:intergenic |
| AGACAGTGACGCATCTGAGG+AGG | 0.637292 | 2_2:-51243019 | Msa0256480:CDS |
| CGAGGCGGTTGACCATAACC+AGG | 0.638416 | 2_2:-51243187 | Msa0256480:CDS |
| CTTTGTTAAAGAAGATGCAG+CGG | 0.638625 | 2_2:+51242811 | None:intergenic |
| CTGCTCAGATGGGACCTCAG+TGG | 0.639451 | 2_2:+51242990 | None:intergenic |
| AGTGGATATAGTTTGCACAA+TGG | 0.643957 | 2_2:-51242620 | Msa0256480:three_prime_UTR |
| CGACCCGTTCGTAACCGTAA+GGG | 0.644461 | 2_2:-51247755 | Msa0256480:CDS |
| TGCTGCTGACCATATAGGCG+AGG | 0.647460 | 2_2:-51244143 | Msa0256480:CDS |
| AGTATATTACCCTTACAAAG+AGG | 0.647626 | 2_2:-51245222 | Msa0256480:CDS |
| AAATTGCAAGCACAAACACA+TGG | 0.648597 | 2_2:-51245971 | Msa0256480:CDS |
| TCAAGAGTATACCTTTCCAA+AGG | 0.649269 | 2_2:+51245732 | None:intergenic |
| GGATGCCTTATCCGAGTCCG+AGG | 0.651459 | 2_2:-51243238 | Msa0256480:CDS |
| TACGAAGAATGGCCGCAAGG+TGG | 0.653009 | 2_2:+51247921 | None:intergenic |
| TCAGATGGAACATCAGTGGA+TGG | 0.657138 | 2_2:+51242964 | None:intergenic |
| TGGCATAGATGTTGACGAGG+CGG | 0.657212 | 2_2:-51243202 | Msa0256480:CDS |
| AGATACGAAGAATGGCCGCA+AGG | 0.658864 | 2_2:+51247918 | None:intergenic |
| CATCTTGAGACGGCGGACGG+TGG | 0.663339 | 2_2:+51247787 | None:intergenic |
| GTGAAGTATCATCTTTGCTG+CGG | 0.666582 | 2_2:+51243308 | None:intergenic |
| TCTGTGTGTGTCCAAAGACC+AGG | 0.685108 | 2_2:+51242670 | None:intergenic |
| GATAAGGCATCCTGTCGCGG+AGG | 0.685952 | 2_2:+51243249 | None:intergenic |
| ATACTTCACGATTGGCAGAG+GGG | 0.703263 | 2_2:-51243294 | Msa0256480:CDS |
| TAATGGCATAGATGTTGACG+AGG | 0.709797 | 2_2:-51243205 | Msa0256480:CDS |
| TGACCAACTTCCAGGCACTG+GGG | 0.724091 | 2_2:-51243055 | Msa0256480:CDS |
| ATAGATGCAAGGGATCCACA+AGG | 0.751368 | 2_2:-51246030 | Msa0256480:CDS |
| CAAACCCTAATTCCACCTTG+CGG | 0.770913 | 2_2:-51247933 | Msa0256480:five_prime_UTR |
| TGAGGAGGATCCATCCACTG+AGG | 0.772372 | 2_2:-51243004 | Msa0256480:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATTACAATATTATTCTTA+AGG | - | chr2_2:51243060-51243079 | Msa0256480:CDS | 10.0% |
| !! | AATTACAATATTATTCTTAA+GGG | - | chr2_2:51243061-51243080 | Msa0256480:CDS | 10.0% |
| !! | AATGTAAAGAAATAAATTAA+GGG | + | chr2_2:51244674-51244693 | None:intergenic | 10.0% |
| !! | TAATGTAAAGAAATAAATTA+AGG | + | chr2_2:51244675-51244694 | None:intergenic | 10.0% |
| !!! | ATGAATTTATTTTAATCTTA+AGG | + | chr2_2:51246117-51246136 | None:intergenic | 10.0% |
| !!! | ATTTGAAATAATATCTTTAA+AGG | - | chr2_2:51246218-51246237 | Msa0256480:intron | 10.0% |
| !! | AAATAAAATAGTTTAAATGA+AGG | - | chr2_2:51246251-51246270 | Msa0256480:intron | 10.0% |
| !! | AATAAAATAGTTTAAATGAA+GGG | - | chr2_2:51246252-51246271 | Msa0256480:intron | 10.0% |
| !!! | TTAATACTTTATTTATTTTC+AGG | - | chr2_2:51246365-51246384 | Msa0256480:intron | 10.0% |
| !!! | TTAGTTTGATATTAAAAAAA+AGG | - | chr2_2:51246903-51246922 | Msa0256480:intron | 10.0% |
| !! | ATATTATATCTTAGTTATAA+TGG | + | chr2_2:51247989-51248008 | None:intergenic | 10.0% |
| !! | ATTACAATATTATTCTTAAG+GGG | - | chr2_2:51243062-51243081 | Msa0256480:CDS | 15.0% |
| !! | TGTAAATTATGTGAATTTAT+TGG | - | chr2_2:51243172-51243191 | Msa0256480:CDS | 15.0% |
| !! | ATCACAATAATATTAAACAA+CGG | + | chr2_2:51244182-51244201 | None:intergenic | 15.0% |
| !!! | TCATATACTCATATTTTAAT+GGG | - | chr2_2:51246176-51246195 | Msa0256480:intron | 15.0% |
| !!! | AAATTCAGCTTGTTAATTTT+AGG | - | chr2_2:51242940-51242959 | Msa0256480:CDS | 20.0% |
| !!! | AATTCAGCTTGTTAATTTTA+GGG | - | chr2_2:51242941-51242960 | Msa0256480:CDS | 20.0% |
| !! | AATTTGTAAAAATGACATGT+CGG | - | chr2_2:51243502-51243521 | Msa0256480:intron | 20.0% |
| !!! | GTTTTTTAAAACCAAAGAAA+AGG | - | chr2_2:51243544-51243563 | Msa0256480:intron | 20.0% |
| !! | TTTATTTGCTTAATGAAGAA+TGG | - | chr2_2:51243783-51243802 | Msa0256480:intron | 20.0% |
| !! | AATATATAAACAAGTATTCC+CGG | + | chr2_2:51243833-51243852 | None:intergenic | 20.0% |
| !!! | TGAAGAGTTAAACAAAATTT+TGG | + | chr2_2:51244113-51244132 | None:intergenic | 20.0% |
| !!! | TAATTATTCATGTGTTGTTT+TGG | - | chr2_2:51245631-51245650 | Msa0256480:intron | 20.0% |
| !!! | AATTATTCATGTGTTGTTTT+GGG | - | chr2_2:51245632-51245651 | Msa0256480:intron | 20.0% |
| !! | ATGAGCATAAAATATTCATT+GGG | + | chr2_2:51245972-51245991 | None:intergenic | 20.0% |
| !!! | GTCATATACTCATATTTTAA+TGG | - | chr2_2:51246175-51246194 | Msa0256480:intron | 20.0% |
| !! | GAGCTTATAAAATAAAAGAA+TGG | - | chr2_2:51246466-51246485 | Msa0256480:intron | 20.0% |
| !! | AAAAACAAGAATACAAAAGT+TGG | + | chr2_2:51246547-51246566 | None:intergenic | 20.0% |
| !! | AATTCAAAAAGAATACCTTA+AGG | + | chr2_2:51246872-51246891 | None:intergenic | 20.0% |
| !! | AAAGTTCAAGAAAAACAAAT+TGG | + | chr2_2:51247140-51247159 | None:intergenic | 20.0% |
| !! | ATATTTCTTATGTTAAGACA+AGG | - | chr2_2:51247161-51247180 | Msa0256480:intron | 20.0% |
| !!! | TTCTCTAAAACAAAAATATC+AGG | + | chr2_2:51247710-51247729 | None:intergenic | 20.0% |
| ! | AAAACGGAATAGATATTTAC+TGG | - | chr2_2:51242526-51242545 | Msa0256480:three_prime_UTR | 25.0% |
| ! | AATAGATATTTACTGGTAGT+CGG | - | chr2_2:51242533-51242552 | Msa0256480:three_prime_UTR | 25.0% |
| ! | CCAATACTGTTATAAGATTT+AGG | + | chr2_2:51242577-51242596 | None:intergenic | 25.0% |
| ! | CCTAAATCTTATAACAGTAT+TGG | - | chr2_2:51242574-51242593 | Msa0256480:three_prime_UTR | 25.0% |
| !!! | TTAATTTTAGGGTTTTGGTT+TGG | - | chr2_2:51242952-51242971 | Msa0256480:CDS | 25.0% |
| !!! | TAATTTTAGGGTTTTGGTTT+GGG | - | chr2_2:51242953-51242972 | Msa0256480:CDS | 25.0% |
| !!! | TATGTGAATTTATTGGTTTG+TGG | - | chr2_2:51243179-51243198 | Msa0256480:CDS | 25.0% |
| ! | ATCTGAATTTCGCTATAAAT+TGG | - | chr2_2:51243354-51243373 | Msa0256480:intron | 25.0% |
| ! | TCTGAATTTCGCTATAAATT+GGG | - | chr2_2:51243355-51243374 | Msa0256480:intron | 25.0% |
| !! | ATATTTGGTGAAATTCATGT+AGG | - | chr2_2:51243618-51243637 | Msa0256480:intron | 25.0% |
| ! | TCATGTCAATACAACATTTA+GGG | + | chr2_2:51243661-51243680 | None:intergenic | 25.0% |
| ! | TTCATGTCAATACAACATTT+AGG | + | chr2_2:51243662-51243681 | None:intergenic | 25.0% |
| ! | AGATTAAGAACAACATCATT+TGG | + | chr2_2:51243872-51243891 | None:intergenic | 25.0% |
| !!! | TAAACAAAATTTTGGCAACA+GGG | + | chr2_2:51244105-51244124 | None:intergenic | 25.0% |
| !!! | TTAAACAAAATTTTGGCAAC+AGG | + | chr2_2:51244106-51244125 | None:intergenic | 25.0% |
| !!! | TATTTAAGTTGATGAATCCA+TGG | - | chr2_2:51244405-51244424 | Msa0256480:intron | 25.0% |
| !!! | TTCATCTTTAGTTGATTTGT+TGG | - | chr2_2:51244845-51244864 | Msa0256480:intron | 25.0% |
| !! | TGAAGGTATATAAGAGTTAA+TGG | + | chr2_2:51244946-51244965 | None:intergenic | 25.0% |
| ! | CTACAAATTAAAACTTAAGC+AGG | + | chr2_2:51245172-51245191 | None:intergenic | 25.0% |
| ! | TGCTAAAATGCTTATAATTC+TGG | + | chr2_2:51245233-51245252 | None:intergenic | 25.0% |
| !!! | AGAATTATAAGCATTTTAGC+AGG | - | chr2_2:51245232-51245251 | Msa0256480:CDS | 25.0% |
| ! | AGATTACTAAACAATCATGT+TGG | - | chr2_2:51245550-51245569 | Msa0256480:CDS | 25.0% |
| ! | AAAATATAGGATGTATCACA+AGG | + | chr2_2:51245591-51245610 | None:intergenic | 25.0% |
| !! | TGATACATCCTATATTTTTC+TGG | - | chr2_2:51245593-51245612 | Msa0256480:intron | 25.0% |
| !! | GATACATCCTATATTTTTCT+GGG | - | chr2_2:51245594-51245613 | Msa0256480:intron | 25.0% |
| ! | TTCAAAACCCAGAAAAATAT+AGG | + | chr2_2:51245604-51245623 | None:intergenic | 25.0% |
| ! | CATTCTTACAAATCAAAATG+AGG | + | chr2_2:51245815-51245834 | None:intergenic | 25.0% |
| ! | ATAAAAGTTACGATCATTCA+GGG | + | chr2_2:51245905-51245924 | None:intergenic | 25.0% |
| ! | AATAAAAGTTACGATCATTC+AGG | + | chr2_2:51245906-51245925 | None:intergenic | 25.0% |
| ! | ATGTTATAGATTGTGATTGT+TGG | - | chr2_2:51245926-51245945 | Msa0256480:intron | 25.0% |
| ! | CATGAGCATAAAATATTCAT+TGG | + | chr2_2:51245973-51245992 | None:intergenic | 25.0% |
| ! | TAATATTGTTCCTATTGTAG+TGG | - | chr2_2:51246148-51246167 | Msa0256480:intron | 25.0% |
| ! | AATATTGTTCCTATTGTAGT+GGG | - | chr2_2:51246149-51246168 | Msa0256480:intron | 25.0% |
| !!! | AACATTTGCAATAGCTTTAA+TGG | + | chr2_2:51247401-51247420 | None:intergenic | 25.0% |
| !! | AAATGCATCAATTATGCTTT+TGG | - | chr2_2:51247809-51247828 | Msa0256480:CDS | 25.0% |
| !! | AATGCATCAATTATGCTTTT+GGG | - | chr2_2:51247810-51247829 | Msa0256480:CDS | 25.0% |
| ! | TATAAATGAAGCTTCAGTTA+TGG | - | chr2_2:51247849-51247868 | Msa0256480:CDS | 25.0% |
| ACTGTTATAAGATTTAGGCT+TGG | + | chr2_2:51242572-51242591 | None:intergenic | 30.0% | |
| !!! | GCTTGTTAATTTTAGGGTTT+TGG | - | chr2_2:51242947-51242966 | Msa0256480:CDS | 30.0% |
| !! | TGAGTTTTTCAGAGAAGAAA+TGG | - | chr2_2:51243021-51243040 | Msa0256480:CDS | 30.0% |
| TAATCATTAAGAAGCGACAT+AGG | + | chr2_2:51243097-51243116 | None:intergenic | 30.0% | |
| GCTTCTTAATGATTATCAGA+AGG | - | chr2_2:51243102-51243121 | Msa0256480:CDS | 30.0% | |
| TTTGAATATTGTAGCAATCG+AGG | - | chr2_2:51243204-51243223 | Msa0256480:CDS | 30.0% | |
| TTGAATATTGTAGCAATCGA+GGG | - | chr2_2:51243205-51243224 | Msa0256480:CDS | 30.0% | |
| ! | AAATTGGGTTGTTTAGTTAG+TGG | - | chr2_2:51243370-51243389 | Msa0256480:intron | 30.0% |
| !! | TTTAGTTAGTGGTGTTACAT+GGG | - | chr2_2:51243381-51243400 | Msa0256480:intron | 30.0% |
| CAAATTATTACCAGTGTTGT+CGG | + | chr2_2:51243488-51243507 | None:intergenic | 30.0% | |
| CAATACAACATTTAGGGAAT+GGG | + | chr2_2:51243655-51243674 | None:intergenic | 30.0% | |
| TCAATACAACATTTAGGGAA+TGG | + | chr2_2:51243656-51243675 | None:intergenic | 30.0% | |
| ATCTGAAAGGAAAGTAATGT+AGG | + | chr2_2:51243912-51243931 | None:intergenic | 30.0% | |
| AAGTTTGTCACAGTAAAGTA+AGG | - | chr2_2:51244304-51244323 | Msa0256480:intron | 30.0% | |
| AGTTTGTCACAGTAAAGTAA+GGG | - | chr2_2:51244305-51244324 | Msa0256480:intron | 30.0% | |
| TAAGGGAAAAAACTAGAAGT+TGG | - | chr2_2:51244322-51244341 | Msa0256480:intron | 30.0% | |
| AAGGGAAAAAACTAGAAGTT+GGG | - | chr2_2:51244323-51244342 | Msa0256480:intron | 30.0% | |
| ! | AAAAGTGTATGATATCTGCT+GGG | + | chr2_2:51244459-51244478 | None:intergenic | 30.0% |
| ! | TATTAACAAGTCCTTTGGAA+AGG | - | chr2_2:51244810-51244829 | Msa0256480:intron | 30.0% |
| ATTAACGCATTACTGGAAAT+TGG | + | chr2_2:51244871-51244890 | None:intergenic | 30.0% | |
| ! | TTCATTGATTAACGCATTAC+TGG | + | chr2_2:51244878-51244897 | None:intergenic | 30.0% |
| TAAAAAAAGACAAGTGAAGC+TGG | - | chr2_2:51244898-51244917 | Msa0256480:intron | 30.0% | |
| GTATATAAGAGTTAATGGAG+AGG | + | chr2_2:51244941-51244960 | None:intergenic | 30.0% | |
| ATAAGATAGCAAATAGCTGA+AGG | + | chr2_2:51244963-51244982 | None:intergenic | 30.0% | |
| TATTGCTCATTATCATGCTT+AGG | - | chr2_2:51244984-51245003 | Msa0256480:intron | 30.0% | |
| ATTGCTCATTATCATGCTTA+GGG | - | chr2_2:51244985-51245004 | Msa0256480:intron | 30.0% | |
| AGTATATTACCCTTACAAAG+AGG | - | chr2_2:51245331-51245350 | Msa0256480:intron | 30.0% | |
| CAAAAAGATCCTCTTTGTAA+GGG | + | chr2_2:51245343-51245362 | None:intergenic | 30.0% | |
| TCAAAAAGATCCTCTTTGTA+AGG | + | chr2_2:51245344-51245363 | None:intergenic | 30.0% | |
| !! | ATCTTTTTGATTGATTGTCC+AGG | - | chr2_2:51245354-51245373 | Msa0256480:intron | 30.0% |
| AACCAAAGTAAAAAGGAAAC+AGG | + | chr2_2:51245443-51245462 | None:intergenic | 30.0% | |
| TGATCACAATCATATTCTGT+GGG | + | chr2_2:51245780-51245799 | None:intergenic | 30.0% | |
| TTGATCACAATCATATTCTG+TGG | + | chr2_2:51245781-51245800 | None:intergenic | 30.0% | |
| GTACATATCAATCAAAGACA+CGG | + | chr2_2:51245839-51245858 | None:intergenic | 30.0% | |
| TGTCTTTGATTGATATGTAC+TGG | - | chr2_2:51245839-51245858 | Msa0256480:intron | 30.0% | |
| TAAAAGTTACGATCATTCAG+GGG | + | chr2_2:51245904-51245923 | None:intergenic | 30.0% | |
| ! | GTCAATAGTAGAAGTTTTTG+TGG | - | chr2_2:51245996-51246015 | Msa0256480:CDS | 30.0% |
| ATATTGTTCCTATTGTAGTG+GGG | - | chr2_2:51246150-51246169 | Msa0256480:intron | 30.0% | |
| ! | AAGATATAAAGAGCATGCAT+GGG | + | chr2_2:51246308-51246327 | None:intergenic | 30.0% |
| ! | AAAGATATAAAGAGCATGCA+TGG | + | chr2_2:51246309-51246328 | None:intergenic | 30.0% |
| ! | GATTATTATCGTTGTTGTTG+TGG | - | chr2_2:51246341-51246360 | Msa0256480:intron | 30.0% |
| GTAAGGAATTATGAACAGTA+AGG | - | chr2_2:51246638-51246657 | Msa0256480:intron | 30.0% | |
| ! | ACTTTACATGCCATTTATAC+TGG | - | chr2_2:51246689-51246708 | Msa0256480:intron | 30.0% |
| ! | GTAGCTTGTATACAAAAACT+AGG | - | chr2_2:51246764-51246783 | Msa0256480:intron | 30.0% |
| ATCTAGTCTAAGTCAAATTG+AGG | + | chr2_2:51246972-51246991 | None:intergenic | 30.0% | |
| TTGACATGCTGTAACATAAA+GGG | + | chr2_2:51247096-51247115 | None:intergenic | 30.0% | |
| TTTGACATGCTGTAACATAA+AGG | + | chr2_2:51247097-51247116 | None:intergenic | 30.0% | |
| ACATCTATGCCATTAACATT+AGG | + | chr2_2:51247343-51247362 | None:intergenic | 30.0% | |
| AAAGAAATGTACCAGTTCAA+GGG | - | chr2_2:51247437-51247456 | Msa0256480:intron | 30.0% | |
| TTATATAAATCCCCTTGAAC+TGG | + | chr2_2:51247451-51247470 | None:intergenic | 30.0% | |
| AAACTCATGATTCACTTGTT+GGG | + | chr2_2:51247639-51247658 | None:intergenic | 30.0% | |
| AGACAAATGAAGTTCAGAAA+TGG | + | chr2_2:51247775-51247794 | None:intergenic | 30.0% | |
| !!! | TTTGTTGAGCATAGTTTTAG+TGG | - | chr2_2:51247915-51247934 | Msa0256480:five_prime_UTR | 30.0% |
| GTTCGGTATGTTCAATTTCA+GGG | - | chr2_2:51242890-51242909 | Msa0256480:three_prime_UTR | 35.0% | |
| ! | GTTTGGGTTTGTGATTTGTA+GGG | - | chr2_2:51242969-51242988 | Msa0256480:CDS | 35.0% |
| TAATCAGAAGCCAAAAGACT+TGG | + | chr2_2:51243293-51243312 | None:intergenic | 35.0% | |
| TCTTTAGCTAAGAAAGCTGA+TGG | - | chr2_2:51243317-51243336 | Msa0256480:CDS | 35.0% | |
| !! | GTTTAGTTAGTGGTGTTACA+TGG | - | chr2_2:51243380-51243399 | Msa0256480:intron | 35.0% |
| !! | TACTTGCTAGTCCTTTTCTT+TGG | + | chr2_2:51243558-51243577 | None:intergenic | 35.0% |
| ! | TCACTCGAACACTCTTTTAT+AGG | + | chr2_2:51243691-51243710 | None:intergenic | 35.0% |
| TACGGAGGAGCTAAATAATT+TGG | + | chr2_2:51243723-51243742 | None:intergenic | 35.0% | |
| ! | AAATTATTTAGCTCCTCCGT+AGG | - | chr2_2:51243722-51243741 | Msa0256480:CDS | 35.0% |
| TAACCAAGTTACAACACCTA+CGG | + | chr2_2:51243741-51243760 | None:intergenic | 35.0% | |
| ATAAACAAGTATTCCCGGTA+AGG | + | chr2_2:51243828-51243847 | None:intergenic | 35.0% | |
| !! | TCTCTTCAAAAGCATCTGAA+AGG | + | chr2_2:51243925-51243944 | None:intergenic | 35.0% |
| CGACATACCATGTTTGAAAA+GGG | - | chr2_2:51244004-51244023 | Msa0256480:intron | 35.0% | |
| TCTTCACCTTTCTATGTTGA+TGG | - | chr2_2:51244127-51244146 | Msa0256480:CDS | 35.0% | |
| CAGAATCCATCAACATAGAA+AGG | + | chr2_2:51244136-51244155 | None:intergenic | 35.0% | |
| GAAACACATAAATGCTTGTC+AGG | + | chr2_2:51244160-51244179 | None:intergenic | 35.0% | |
| !! | TAAGTTGATGAATCCATGGT+TGG | - | chr2_2:51244409-51244428 | Msa0256480:intron | 35.0% |
| ! | CAAAAGTGTATGATATCTGC+TGG | + | chr2_2:51244460-51244479 | None:intergenic | 35.0% |
| TATTGTATCTGTCCTGATAC+AGG | - | chr2_2:51244498-51244517 | Msa0256480:intron | 35.0% | |
| TTGCATCTATAACCTGTATC+AGG | + | chr2_2:51244513-51244532 | None:intergenic | 35.0% | |
| TGATACAGGTTATAGATGCA+AGG | - | chr2_2:51244512-51244531 | Msa0256480:intron | 35.0% | |
| GATACAGGTTATAGATGCAA+GGG | - | chr2_2:51244513-51244532 | Msa0256480:intron | 35.0% | |
| AAATTGCAAGCACAAACACA+TGG | - | chr2_2:51244582-51244601 | Msa0256480:intron | 35.0% | |
| ! | CATGGTGCTTTTATTGAACA+AGG | - | chr2_2:51244600-51244619 | Msa0256480:intron | 35.0% |
| !! | AGGACTTGTTAATACTTGCA+TGG | + | chr2_2:51244804-51244823 | None:intergenic | 35.0% |
| GCAAGTATTAACAAGTCCTT+TGG | - | chr2_2:51244805-51244824 | Msa0256480:intron | 35.0% | |
| ! | TCAAGAGTATACCTTTCCAA+AGG | + | chr2_2:51244824-51244843 | None:intergenic | 35.0% |
| TAAGAGTTAATGGAGAGGAA+AGG | + | chr2_2:51244936-51244955 | None:intergenic | 35.0% | |
| GATAAGCAAGCAATATCTGT+TGG | - | chr2_2:51245051-51245070 | Msa0256480:intron | 35.0% | |
| TTCGTTGGATATCCAAATGT+TGG | - | chr2_2:51245075-51245094 | Msa0256480:intron | 35.0% | |
| TCGTTGGATATCCAAATGTT+GGG | - | chr2_2:51245076-51245095 | Msa0256480:intron | 35.0% | |
| CAAACCTATGACACATTGAT+CGG | + | chr2_2:51245273-51245292 | None:intergenic | 35.0% | |
| ! | CTCCTGTTTCCTTTTTACTT+TGG | - | chr2_2:51245438-51245457 | Msa0256480:intron | 35.0% |
| ATCACGCAACCAAAGTAAAA+AGG | + | chr2_2:51245450-51245469 | None:intergenic | 35.0% | |
| ATCTAAGAATAGCTCTTCCT+GGG | + | chr2_2:51245665-51245684 | None:intergenic | 35.0% | |
| AATCTAAGAATAGCTCTTCC+TGG | + | chr2_2:51245666-51245685 | None:intergenic | 35.0% | |
| TGACTAGCATATTACCTATG+TGG | - | chr2_2:51245702-51245721 | Msa0256480:intron | 35.0% | |
| TAATATACGACCAGTGTAAG+TGG | + | chr2_2:51245744-51245763 | None:intergenic | 35.0% | |
| TGTAGTTCAAGCATCTTGTA+AGG | - | chr2_2:51246621-51246640 | Msa0256480:CDS | 35.0% | |
| AGGAATTATGAACAGTAAGG+TGG | - | chr2_2:51246641-51246660 | Msa0256480:intron | 35.0% | |
| CAAATCAAGGCCAGTATAAA+TGG | + | chr2_2:51246702-51246721 | None:intergenic | 35.0% | |
| !! | CATTTATACTGGCCTTGATT+TGG | - | chr2_2:51246700-51246719 | Msa0256480:intron | 35.0% |
| ACACACAGATAACCAAATCA+AGG | + | chr2_2:51246715-51246734 | None:intergenic | 35.0% | |
| ATGCCATATATCTTGTCATC+AGG | - | chr2_2:51246796-51246815 | Msa0256480:intron | 35.0% | |
| TGCCATATATCTTGTCATCA+GGG | - | chr2_2:51246797-51246816 | Msa0256480:intron | 35.0% | |
| AACCCTGATGACAAGATATA+TGG | + | chr2_2:51246802-51246821 | None:intergenic | 35.0% | |
| ! | ATGATTTGCAAAGCTGAAGT+AGG | + | chr2_2:51246839-51246858 | None:intergenic | 35.0% |
| ! | TTTATGCGACTTTTACTCGA+TGG | - | chr2_2:51247191-51247210 | Msa0256480:intron | 35.0% |
| CAAAGATGATACTTCACGAT+TGG | - | chr2_2:51247251-51247270 | Msa0256480:CDS | 35.0% | |
| CAAAGAAATGTACCAGTTCA+AGG | - | chr2_2:51247436-51247455 | Msa0256480:intron | 35.0% | |
| AAGAAATGTACCAGTTCAAG+GGG | - | chr2_2:51247438-51247457 | Msa0256480:intron | 35.0% | |
| GAAACTCATGATTCACTTGT+TGG | + | chr2_2:51247640-51247659 | None:intergenic | 35.0% | |
| TGAATCATGAGTTTCAGTTG+CGG | - | chr2_2:51247645-51247664 | Msa0256480:intron | 35.0% | |
| TTAGCTGTTAGGGTTTATGT+TGG | - | chr2_2:51247670-51247689 | Msa0256480:intron | 35.0% | |
| CTTTGTTAAAGAAGATGCAG+CGG | + | chr2_2:51247745-51247764 | None:intergenic | 35.0% | |
| !! | GTTATGGTTTGTTTATCACC+TGG | - | chr2_2:51247865-51247884 | Msa0256480:CDS | 35.0% |
| ! | TTTGTTTATCACCTGGTCTT+TGG | - | chr2_2:51247872-51247891 | Msa0256480:CDS | 35.0% |
| ! | AGTGGATATAGTTTGCACAA+TGG | - | chr2_2:51247933-51247952 | Msa0256480:five_prime_UTR | 35.0% |
| CATTGCAGAGATACGAAGAA+TGG | + | chr2_2:51242646-51242665 | None:intergenic | 40.0% | |
| CATTCTTCGTATCTCTGCAA+TGG | - | chr2_2:51242644-51242663 | Msa0256480:three_prime_UTR | 40.0% | |
| ! | TTTTGTACATCTTGAGACGG+CGG | + | chr2_2:51242776-51242795 | None:intergenic | 40.0% |
| !! | GGGTTTTGTACATCTTGAGA+CGG | + | chr2_2:51242779-51242798 | None:intergenic | 40.0% |
| TACTCAAGACATGACCCTTA+CGG | + | chr2_2:51242815-51242834 | None:intergenic | 40.0% | |
| ! | TTGACGATCTGGTTTGATTC+TGG | + | chr2_2:51242868-51242887 | None:intergenic | 40.0% |
| GAATCAAACCAGATCGTCAA+TGG | - | chr2_2:51242868-51242887 | Msa0256480:three_prime_UTR | 40.0% | |
| AAACCAGATCGTCAATGGTT+CGG | - | chr2_2:51242873-51242892 | Msa0256480:three_prime_UTR | 40.0% | |
| ! | GGTTCGGTATGTTCAATTTC+AGG | - | chr2_2:51242889-51242908 | Msa0256480:three_prime_UTR | 40.0% |
| ! | GGTTTGGGTTTGTGATTTGT+AGG | - | chr2_2:51242968-51242987 | Msa0256480:CDS | 40.0% |
| AGTCTTAGGTCCAAATGCAT+CGG | + | chr2_2:51243258-51243277 | None:intergenic | 40.0% | |
| !! | GGTCGCTTTCTTTTAGTCTT+AGG | + | chr2_2:51243272-51243291 | None:intergenic | 40.0% |
| ! | AAGAAAGCGACCAAGTCTTT+TGG | - | chr2_2:51243280-51243299 | Msa0256480:CDS | 40.0% |
| AAGAAAGCTGATGGTTCTCA+AGG | - | chr2_2:51243326-51243345 | Msa0256480:CDS | 40.0% | |
| !! | TTAGTGGTGTTACATGGGAT+AGG | - | chr2_2:51243386-51243405 | Msa0256480:intron | 40.0% |
| !! | CGGTGCTACAAAGAAAATGA+CGG | - | chr2_2:51243522-51243541 | Msa0256480:intron | 40.0% |
| CCAAATATAAGACTCGCAGT+TGG | + | chr2_2:51243606-51243625 | None:intergenic | 40.0% | |
| ! | CCAACTGCGAGTCTTATATT+TGG | - | chr2_2:51243603-51243622 | Msa0256480:intron | 40.0% |
| AACATTTAGGGAATGGGTAG+TGG | + | chr2_2:51243649-51243668 | None:intergenic | 40.0% | |
| ! | GCAGTTTTCTGTTTCCTTAC+CGG | - | chr2_2:51243811-51243830 | Msa0256480:intron | 40.0% |
| ! | CAGTTTTCTGTTTCCTTACC+GGG | - | chr2_2:51243812-51243831 | Msa0256480:intron | 40.0% |
| ! | TTTGAAGAGAAGCATGCTTC+TGG | - | chr2_2:51243935-51243954 | Msa0256480:intron | 40.0% |
| GCGACATACCATGTTTGAAA+AGG | - | chr2_2:51244003-51244022 | Msa0256480:intron | 40.0% | |
| ! | GCTTTGACCCTTTTCAAACA+TGG | + | chr2_2:51244014-51244033 | None:intergenic | 40.0% |
| TTCTTCAGATGTTGTTGTCC+AGG | - | chr2_2:51244069-51244088 | Msa0256480:intron | 40.0% | |
| CAAACAAATTCGACCAACCA+TGG | + | chr2_2:51244425-51244444 | None:intergenic | 40.0% | |
| TGATAACATCTTGTGCCTTG+TGG | + | chr2_2:51244541-51244560 | None:intergenic | 40.0% | |
| ATCGCACTGCAAAAAGAATG+AGG | + | chr2_2:51244713-51244732 | None:intergenic | 40.0% | |
| TTAATGGAGAGGAAAGGAGA+TGG | + | chr2_2:51244930-51244949 | None:intergenic | 40.0% | |
| TGCTTAGGGTTCACTTCTAT+CGG | - | chr2_2:51244999-51245018 | Msa0256480:intron | 40.0% | |
| !! | GCAATATCTGTTGGTTTCGT+TGG | - | chr2_2:51245060-51245079 | Msa0256480:intron | 40.0% |
| ACTGATGACTTCCCAACATT+TGG | + | chr2_2:51245090-51245109 | None:intergenic | 40.0% | |
| CAGGAAATAAGAAGCAGTGA+AGG | + | chr2_2:51245153-51245172 | None:intergenic | 40.0% | |
| !! | TTAGCAGGTTGATTGACATG+TGG | - | chr2_2:51245247-51245266 | Msa0256480:CDS | 40.0% |
| CAATGTGTCATAGGTTTGCA+AGG | - | chr2_2:51245275-51245294 | Msa0256480:intron | 40.0% | |
| !! | ACTTTTGTTTCCCCTGGAAT+TGG | + | chr2_2:51245306-51245325 | None:intergenic | 40.0% |
| CTGTTTCAGAGTCATTGTTG+TGG | + | chr2_2:51245389-51245408 | None:intergenic | 40.0% | |
| TGAAACAGATGTTGTGCTGA+AGG | - | chr2_2:51245401-51245420 | Msa0256480:intron | 40.0% | |
| GAAACAGATGTTGTGCTGAA+GGG | - | chr2_2:51245402-51245421 | Msa0256480:intron | 40.0% | |
| ! | TTTTGTTCGATTCCCAAGAC+TGG | - | chr2_2:51245486-51245505 | Msa0256480:CDS | 40.0% |
| ATGTTTGCACTTCCAGTCTT+GGG | + | chr2_2:51245501-51245520 | None:intergenic | 40.0% | |
| TATGTTTGCACTTCCAGTCT+TGG | + | chr2_2:51245502-51245521 | None:intergenic | 40.0% | |
| ! | TAAAGAGCATGCATGGGTTT+GGG | + | chr2_2:51246302-51246321 | None:intergenic | 40.0% |
| ! | ATAAAGAGCATGCATGGGTT+TGG | + | chr2_2:51246303-51246322 | None:intergenic | 40.0% |
| AAAGATGCTGCTGACCATAT+AGG | - | chr2_2:51246405-51246424 | Msa0256480:intron | 40.0% | |
| GTTTCAAAACCTCGCCTATA+TGG | + | chr2_2:51246422-51246441 | None:intergenic | 40.0% | |
| !!! | GGTTTTGAAACGTGTGAAGA+AGG | - | chr2_2:51246431-51246450 | Msa0256480:intron | 40.0% |
| CTACTATTCACCACGAAGTA+AGG | + | chr2_2:51246507-51246526 | None:intergenic | 40.0% | |
| CTTCAGCTTTGCAAATCATC+TGG | - | chr2_2:51246840-51246859 | Msa0256480:intron | 40.0% | |
| ATCATCTGGCAAACTCCTTA+AGG | - | chr2_2:51246854-51246873 | Msa0256480:intron | 40.0% | |
| ! | TTCTTTAGCTCCATCACAGA+GGG | + | chr2_2:51247002-51247021 | None:intergenic | 40.0% |
| ! | TTTCTTTAGCTCCATCACAG+AGG | + | chr2_2:51247003-51247022 | None:intergenic | 40.0% |
| ! | TTTTACTCGATGGCTTTTCC+AGG | - | chr2_2:51247201-51247220 | Msa0256480:intron | 40.0% |
| ! | TTTACTCGATGGCTTTTCCA+GGG | - | chr2_2:51247202-51247221 | Msa0256480:intron | 40.0% |
| ! | GTGAAGTATCATCTTTGCTG+CGG | + | chr2_2:51247248-51247267 | None:intergenic | 40.0% |
| TAATGGCATAGATGTTGACG+AGG | - | chr2_2:51247348-51247367 | Msa0256480:intron | 40.0% | |
| TGGTACATTTCTTTGCTGCT+GGG | + | chr2_2:51247431-51247450 | None:intergenic | 40.0% | |
| GAATCATGAGTTTCAGTTGC+GGG | - | chr2_2:51247646-51247665 | Msa0256480:intron | 40.0% | |
| TAAAGAAGATGCAGCGGAAA+TGG | + | chr2_2:51247739-51247758 | None:intergenic | 40.0% | |
| CGCTGCATCTTCTTTAACAA+AGG | - | chr2_2:51247743-51247762 | Msa0256480:CDS | 40.0% | |
| !! | TGCTTTTGGGAATTCTGTTC+TGG | - | chr2_2:51247823-51247842 | Msa0256480:CDS | 40.0% |
| AGATTTAGGCTTGGCTTACG+TGG | + | chr2_2:51242563-51242582 | None:intergenic | 45.0% | |
| CAAGGTGGAATTAGGGTTTG+TGG | + | chr2_2:51242620-51242639 | None:intergenic | 45.0% | |
| CAAACCCTAATTCCACCTTG+CGG | - | chr2_2:51242620-51242639 | Msa0256480:three_prime_UTR | 45.0% | |
| ! | GTTGGAGTGCTTTGGTTTAC+CGG | + | chr2_2:51242700-51242719 | None:intergenic | 45.0% |
| ATGACCCTTACGGTTACGAA+CGG | + | chr2_2:51242805-51242824 | None:intergenic | 45.0% | |
| ! | TCTGGTTTGATTCTGGTGGA+TGG | + | chr2_2:51242861-51242880 | None:intergenic | 45.0% |
| ! | ACGATCTGGTTTGATTCTGG+TGG | + | chr2_2:51242865-51242884 | None:intergenic | 45.0% |
| ATACCGAACCATTGACGATC+TGG | + | chr2_2:51242879-51242898 | None:intergenic | 45.0% | |
| ! | TTTAGGGAATGGGTAGTGGT+AGG | + | chr2_2:51243645-51243664 | None:intergenic | 45.0% |
| ! | AGAGAAGCATGCTTCTGGTA+CGG | - | chr2_2:51243940-51243959 | Msa0256480:intron | 45.0% |
| AGGGTCAAAGCAAACGCATA+TGG | - | chr2_2:51244023-51244042 | Msa0256480:intron | 45.0% | |
| GGGTCAAAGCAAACGCATAT+GGG | - | chr2_2:51244024-51244043 | Msa0256480:intron | 45.0% | |
| GGTCAAAGCAAACGCATATG+GGG | - | chr2_2:51244025-51244044 | Msa0256480:intron | 45.0% | |
| ATAGATGCAAGGGATCCACA+AGG | - | chr2_2:51244523-51244542 | Msa0256480:intron | 45.0% | |
| AGTGCGATCTAATTCCTGCT+TGG | - | chr2_2:51244725-51244744 | Msa0256480:intron | 45.0% | |
| GTGCGATCTAATTCCTGCTT+GGG | - | chr2_2:51244726-51244745 | Msa0256480:intron | 45.0% | |
| ATTCCTGCTTGGGCAACAAA+AGG | - | chr2_2:51244736-51244755 | Msa0256480:intron | 45.0% | |
| TTCCAGGGGAAACAAAAGTC+TGG | - | chr2_2:51245307-51245326 | Msa0256480:intron | 45.0% | |
| TTGTTGTGGTAGACAACTCC+TGG | + | chr2_2:51245375-51245394 | None:intergenic | 45.0% | |
| GGATGTATCACAAGGCTGAT+TGG | + | chr2_2:51245583-51245602 | None:intergenic | 45.0% | |
| !!! | TTGTTTTGGGACTAAGTCCC+AGG | - | chr2_2:51245645-51245664 | Msa0256480:intron | 45.0% |
| GGGTAAAATGACAGCCACAT+AGG | + | chr2_2:51245719-51245738 | None:intergenic | 45.0% | |
| ! | TTTTACCCAGCCACTTACAC+TGG | - | chr2_2:51245731-51245750 | Msa0256480:intron | 45.0% |
| ! | TTGTTCCTATTGTAGTGGGG+TGG | - | chr2_2:51246153-51246172 | Msa0256480:intron | 45.0% |
| TATGACCACCCCACTACAAT+AGG | + | chr2_2:51246161-51246180 | None:intergenic | 45.0% | |
| TTCCTTGTCTCCTTACTTCG+TGG | - | chr2_2:51246494-51246513 | Msa0256480:CDS | 45.0% | |
| AGATGCTTGAACTACAGCGA+AGG | + | chr2_2:51246617-51246636 | None:intergenic | 45.0% | |
| GATAGATATGCCCTCTGTGA+TGG | - | chr2_2:51246989-51247008 | Msa0256480:intron | 45.0% | |
| TCATCTTTGCTGCGGTCATA+AGG | + | chr2_2:51247240-51247259 | None:intergenic | 45.0% | |
| TGATACTTCACGATTGGCAG+AGG | - | chr2_2:51247257-51247276 | Msa0256480:CDS | 45.0% | |
| GATACTTCACGATTGGCAGA+GGG | - | chr2_2:51247258-51247277 | Msa0256480:CDS | 45.0% | |
| ATACTTCACGATTGGCAGAG+GGG | - | chr2_2:51247259-51247278 | Msa0256480:CDS | 45.0% | |
| TCCGAGGAGCCTAATGTTAA+TGG | - | chr2_2:51247331-51247350 | Msa0256480:CDS | 45.0% | |
| GCCATTAACATTAGGCTCCT+CGG | + | chr2_2:51247335-51247354 | None:intergenic | 45.0% | |
| CTGGTACATTTCTTTGCTGC+TGG | + | chr2_2:51247432-51247451 | None:intergenic | 45.0% | |
| TCAGATGGAACATCAGTGGA+TGG | + | chr2_2:51247592-51247611 | None:intergenic | 45.0% | |
| GCAGAAATAAGCTGCTCAGA+TGG | + | chr2_2:51247607-51247626 | None:intergenic | 45.0% | |
| ! | CATGATTCACTTGTTGGGAC+CGG | + | chr2_2:51247634-51247653 | None:intergenic | 45.0% |
| AGTTGCGGGTTTAGCTGTTA+GGG | - | chr2_2:51247660-51247679 | Msa0256480:intron | 45.0% | |
| ATGGCCGCAAGGTGGAATTA+GGG | + | chr2_2:51242627-51242646 | None:intergenic | 50.0% | |
| AATGGCCGCAAGGTGGAATT+AGG | + | chr2_2:51242628-51242647 | None:intergenic | 50.0% | |
| AGATACGAAGAATGGCCGCA+AGG | + | chr2_2:51242638-51242657 | None:intergenic | 50.0% | |
| GAGCGAAACGTTAACCTCTC+CGG | - | chr2_2:51242678-51242697 | Msa0256480:three_prime_UTR | 50.0% | |
| ! | AGTGCTTTGGTTTACCGGAG+AGG | + | chr2_2:51242695-51242714 | None:intergenic | 50.0% |
| CTTGGAGTCATTGCTCCGAT+TGG | + | chr2_2:51242727-51242746 | None:intergenic | 50.0% | |
| TGACCCTTACGGTTACGAAC+GGG | + | chr2_2:51242804-51242823 | None:intergenic | 50.0% | |
| ! | TCTGGTGGATGGAAGCTCTT+TGG | + | chr2_2:51242850-51242869 | None:intergenic | 50.0% |
| GAGCCTTTCTCCGATGCATT+TGG | - | chr2_2:51243245-51243264 | Msa0256480:CDS | 50.0% | |
| GGTCCAAATGCATCGGAGAA+AGG | + | chr2_2:51243251-51243270 | None:intergenic | 50.0% | |
| CCAAGTTACAACACCTACGG+AGG | + | chr2_2:51243738-51243757 | None:intergenic | 50.0% | |
| ! | CCTCCGTAGGTGTTGTAACT+TGG | - | chr2_2:51243735-51243754 | Msa0256480:CDS | 50.0% |
| GCTGAAGCTGATGAAGCAGA+TGG | - | chr2_2:51243965-51243984 | Msa0256480:intron | 50.0% | |
| ! | CATCCTTTTGTTGCCCAAGC+AGG | + | chr2_2:51244742-51244761 | None:intergenic | 50.0% |
| CTGCTTGGGCAACAAAAGGA+TGG | - | chr2_2:51244740-51244759 | Msa0256480:intron | 50.0% | |
| CTTGCATGGAATGCTAGCGT+TGG | + | chr2_2:51244790-51244809 | None:intergenic | 50.0% | |
| GTGGCCGATCAATGTGTCAT+AGG | - | chr2_2:51245266-51245285 | Msa0256480:CDS | 50.0% | |
| TGCAAGGTTGCTCCAATTCC+AGG | - | chr2_2:51245291-51245310 | Msa0256480:intron | 50.0% | |
| GCAAGGTTGCTCCAATTCCA+GGG | - | chr2_2:51245292-51245311 | Msa0256480:intron | 50.0% | |
| CAAGGTTGCTCCAATTCCAG+GGG | - | chr2_2:51245293-51245312 | Msa0256480:intron | 50.0% | |
| !! | TGCCAGACTTTTGTTTCCCC+TGG | + | chr2_2:51245312-51245331 | None:intergenic | 50.0% |
| AGATGTTGTGCTGAAGGGTG+TGG | - | chr2_2:51245407-51245426 | Msa0256480:intron | 50.0% | |
| TACGACCAGTGTAAGTGGCT+GGG | + | chr2_2:51245739-51245758 | None:intergenic | 50.0% | |
| ATACGACCAGTGTAAGTGGC+TGG | + | chr2_2:51245740-51245759 | None:intergenic | 50.0% | |
| TACGATCATTCAGGGGATGC+TGG | + | chr2_2:51245897-51245916 | None:intergenic | 50.0% | |
| CACCACGAAGTAAGGAGACA+AGG | + | chr2_2:51246499-51246518 | None:intergenic | 50.0% | |
| TTTGCTGCGGTCATAAGGTC+AGG | + | chr2_2:51247235-51247254 | None:intergenic | 50.0% | |
| AACATTAGGCTCCTCGGACT+CGG | + | chr2_2:51247329-51247348 | None:intergenic | 50.0% | |
| TGGCATAGATGTTGACGAGG+CGG | - | chr2_2:51247351-51247370 | Msa0256480:intron | 50.0% | |
| CTTTAATGGCAGCAGATGCC+TGG | + | chr2_2:51247387-51247406 | None:intergenic | 50.0% | |
| GAAACTGCTGACCAACTTCC+AGG | - | chr2_2:51247490-51247509 | Msa0256480:CDS | 50.0% | |
| TGAAGACAGTGACGCATCTG+AGG | - | chr2_2:51247531-51247550 | Msa0256480:CDS | 50.0% | |
| TGGATGGATCCTGCTCAGAT+GGG | + | chr2_2:51247576-51247595 | None:intergenic | 50.0% | |
| CTGCTCAGATGGAACATCAG+TGG | + | chr2_2:51247596-51247615 | None:intergenic | 50.0% | |
| !! | GCAGCTTATTTCTGCTGAGC+CGG | - | chr2_2:51247612-51247631 | Msa0256480:intron | 50.0% |
| CAGTTGCGGGTTTAGCTGTT+AGG | - | chr2_2:51247659-51247678 | Msa0256480:intron | 50.0% | |
| TCTGTGTGTGTCCAAAGACC+AGG | + | chr2_2:51247886-51247905 | None:intergenic | 50.0% | |
| TACGAAGAATGGCCGCAAGG+TGG | + | chr2_2:51242635-51242654 | None:intergenic | 55.0% | |
| ! | TTGGCGTCGTTGGAGTGCTT+TGG | + | chr2_2:51242708-51242727 | None:intergenic | 55.0% |
| AGCACTCCAACGACGCCAAT+CGG | - | chr2_2:51242709-51242728 | Msa0256480:three_prime_UTR | 55.0% | |
| ATTGCTCCGATTGGCGTCGT+TGG | + | chr2_2:51242718-51242737 | None:intergenic | 55.0% | |
| GTACATCTTGAGACGGCGGA+CGG | + | chr2_2:51242772-51242791 | None:intergenic | 55.0% | |
| CTTACGGTTACGAACGGGTC+GGG | + | chr2_2:51242799-51242818 | None:intergenic | 55.0% | |
| CCTTACGGTTACGAACGGGT+CGG | + | chr2_2:51242800-51242819 | None:intergenic | 55.0% | |
| CGACCCGTTCGTAACCGTAA+GGG | - | chr2_2:51242798-51242817 | Msa0256480:three_prime_UTR | 55.0% | |
| TGACACGACACCGACAACAC+TGG | - | chr2_2:51243475-51243494 | Msa0256480:intron | 55.0% | |
| CAACAGGGTGACACACTACC+TGG | + | chr2_2:51244090-51244109 | None:intergenic | 55.0% | |
| ! | GTTGTGCTGAAGGGTGTGGT+AGG | - | chr2_2:51245411-51245430 | Msa0256480:intron | 55.0% |
| TCAGGGGATGCTGGACTGAT+AGG | + | chr2_2:51245888-51245907 | None:intergenic | 55.0% | |
| TGCTGCTGACCATATAGGCG+AGG | - | chr2_2:51246410-51246429 | Msa0256480:intron | 55.0% | |
| ! | ACTCGATGGCTTTTCCAGGG+TGG | - | chr2_2:51247205-51247224 | Msa0256480:intron | 55.0% |
| TAAGGTCAGGTTCACCACCC+TGG | + | chr2_2:51247222-51247241 | None:intergenic | 55.0% | |
| CGCGGAGGAGGGACAAAAAA+GGG | + | chr2_2:51247292-51247311 | None:intergenic | 55.0% | |
| TCGCGGAGGAGGGACAAAAA+AGG | + | chr2_2:51247293-51247312 | None:intergenic | 55.0% | |
| ! | TCGGATAAGGCATCCTGTCG+CGG | + | chr2_2:51247310-51247329 | None:intergenic | 55.0% |
| TGGCAGCAGATGCCTGGTTA+TGG | + | chr2_2:51247381-51247400 | None:intergenic | 55.0% | |
| AGACAGTGACGCATCTGAGG+AGG | - | chr2_2:51247534-51247553 | Msa0256480:CDS | 55.0% | |
| TGAGGAGGATCCATCCACTG+AGG | - | chr2_2:51247549-51247568 | Msa0256480:CDS | 55.0% | |
| TCAGATGGGACCTCAGTGGA+TGG | + | chr2_2:51247562-51247581 | None:intergenic | 55.0% | |
| GTGGATGGATCCTGCTCAGA+TGG | + | chr2_2:51247577-51247596 | None:intergenic | 55.0% | |
| AGCGGAACGCTTCTCGGTCT+TGG | + | chr2_2:51242745-51242764 | None:intergenic | 60.0% | |
| CCGACCCGTTCGTAACCGTA+AGG | - | chr2_2:51242797-51242816 | Msa0256480:three_prime_UTR | 60.0% | |
| GAGCATGCATGGGTTTGGGC+TGG | + | chr2_2:51246298-51246317 | None:intergenic | 60.0% | |
| ! | TTTTGTCCCTCCTCCGCGAC+AGG | - | chr2_2:51247294-51247313 | Msa0256480:CDS | 60.0% |
| ! | GATAAGGCATCCTGTCGCGG+AGG | + | chr2_2:51247307-51247326 | None:intergenic | 60.0% |
| GGATGCCTTATCCGAGTCCG+AGG | - | chr2_2:51247315-51247334 | Msa0256480:CDS | 60.0% | |
| AGGCTCCTCGGACTCGGATA+AGG | + | chr2_2:51247323-51247342 | None:intergenic | 60.0% | |
| CGAGGCGGTTGACCATAACC+AGG | - | chr2_2:51247366-51247385 | Msa0256480:intron | 60.0% | |
| CTGCTCAGATGGGACCTCAG+TGG | + | chr2_2:51247566-51247585 | None:intergenic | 60.0% | |
| CACTGAGGTCCCATCTGAGC+AGG | - | chr2_2:51247564-51247583 | Msa0256480:CDS | 60.0% | |
| GGTGGCAGCGGAACGCTTCT+CGG | + | chr2_2:51242751-51242770 | None:intergenic | 65.0% | |
| CATCTTGAGACGGCGGACGG+TGG | + | chr2_2:51242769-51242788 | None:intergenic | 65.0% | |
| AGGCATCCTGTCGCGGAGGA+GGG | + | chr2_2:51247303-51247322 | None:intergenic | 65.0% | |
| ! | AAGGCATCCTGTCGCGGAGG+AGG | + | chr2_2:51247304-51247323 | None:intergenic | 65.0% |
| GAGACGGCGGACGGTGGCAG+CGG | + | chr2_2:51242763-51242782 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 51242514 | 51248061 | 51242514 | ID=Msa0256480;Name=Msa0256480 |
| chr2_2 | mRNA | 51242514 | 51248061 | 51242514 | ID=Msa0256480-mRNA-1;Parent=Msa0256480;Name=Msa0256480-mRNA-1;_AED=0.06;_eAED=0.06;_QI=149|1|1|1|1|1|11|407|574 |
| chr2_2 | exon | 51242514 | 51243352 | 51242514 | ID=Msa0256480-mRNA-1:exon:15464;Parent=Msa0256480-mRNA-1 |
| chr2_2 | exon | 51243700 | 51243757 | 51243700 | ID=Msa0256480-mRNA-1:exon:15463;Parent=Msa0256480-mRNA-1 |
| chr2_2 | exon | 51244088 | 51244188 | 51244088 | ID=Msa0256480-mRNA-1:exon:15462;Parent=Msa0256480-mRNA-1 |
| chr2_2 | exon | 51245147 | 51245287 | 51245147 | ID=Msa0256480-mRNA-1:exon:15461;Parent=Msa0256480-mRNA-1 |
| chr2_2 | exon | 51245441 | 51245569 | 51245441 | ID=Msa0256480-mRNA-1:exon:15460;Parent=Msa0256480-mRNA-1 |
| chr2_2 | exon | 51245744 | 51245848 | 51245744 | ID=Msa0256480-mRNA-1:exon:15459;Parent=Msa0256480-mRNA-1 |
| chr2_2 | exon | 51245954 | 51246055 | 51245954 | ID=Msa0256480-mRNA-1:exon:15458;Parent=Msa0256480-mRNA-1 |
| chr2_2 | exon | 51246485 | 51246645 | 51246485 | ID=Msa0256480-mRNA-1:exon:15457;Parent=Msa0256480-mRNA-1 |
| chr2_2 | exon | 51247228 | 51247357 | 51247228 | ID=Msa0256480-mRNA-1:exon:15456;Parent=Msa0256480-mRNA-1 |
| chr2_2 | exon | 51247452 | 51247585 | 51247452 | ID=Msa0256480-mRNA-1:exon:15455;Parent=Msa0256480-mRNA-1 |
| chr2_2 | exon | 51247681 | 51248061 | 51247681 | ID=Msa0256480-mRNA-1:exon:15454;Parent=Msa0256480-mRNA-1 |
| chr2_2 | five_prime_UTR | 51247913 | 51248061 | 51247913 | ID=Msa0256480-mRNA-1:five_prime_utr;Parent=Msa0256480-mRNA-1 |
| chr2_2 | CDS | 51247681 | 51247912 | 51247681 | ID=Msa0256480-mRNA-1:cds;Parent=Msa0256480-mRNA-1 |
| chr2_2 | CDS | 51247452 | 51247585 | 51247452 | ID=Msa0256480-mRNA-1:cds;Parent=Msa0256480-mRNA-1 |
| chr2_2 | CDS | 51247228 | 51247357 | 51247228 | ID=Msa0256480-mRNA-1:cds;Parent=Msa0256480-mRNA-1 |
| chr2_2 | CDS | 51246485 | 51246645 | 51246485 | ID=Msa0256480-mRNA-1:cds;Parent=Msa0256480-mRNA-1 |
| chr2_2 | CDS | 51245954 | 51246055 | 51245954 | ID=Msa0256480-mRNA-1:cds;Parent=Msa0256480-mRNA-1 |
| chr2_2 | CDS | 51245744 | 51245848 | 51245744 | ID=Msa0256480-mRNA-1:cds;Parent=Msa0256480-mRNA-1 |
| chr2_2 | CDS | 51245441 | 51245569 | 51245441 | ID=Msa0256480-mRNA-1:cds;Parent=Msa0256480-mRNA-1 |
| chr2_2 | CDS | 51245147 | 51245287 | 51245147 | ID=Msa0256480-mRNA-1:cds;Parent=Msa0256480-mRNA-1 |
| chr2_2 | CDS | 51244088 | 51244188 | 51244088 | ID=Msa0256480-mRNA-1:cds;Parent=Msa0256480-mRNA-1 |
| chr2_2 | CDS | 51243700 | 51243757 | 51243700 | ID=Msa0256480-mRNA-1:cds;Parent=Msa0256480-mRNA-1 |
| chr2_2 | CDS | 51242921 | 51243352 | 51242921 | ID=Msa0256480-mRNA-1:cds;Parent=Msa0256480-mRNA-1 |
| chr2_2 | three_prime_UTR | 51242514 | 51242920 | 51242514 | ID=Msa0256480-mRNA-1:three_prime_utr;Parent=Msa0256480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
