Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0783860 | sp|Q8L5Z7|SNX2A_ARATH | 67.152 | 481 | 139 | 6 | 48 | 510 | 101 | 580 | 0.0 | 640 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0783860 | G7K781 | 97.481 | 516 | 12 | 1 | 1 | 515 | 1 | 516 | 0.0 | 1028 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0028930 | Msa0783860 | 0.800215 | 1.600122e-48 | -8.615850e-47 |
| Msa0092410 | Msa0783860 | 0.803644 | 3.158876e-49 | -8.615850e-47 |
| Msa0106620 | Msa0783860 | 0.810309 | 1.228712e-50 | -8.615850e-47 |
| Msa0662890 | Msa0783860 | 0.802775 | 4.779348e-49 | -8.615850e-47 |
| Msa0783860 | Msa0789560 | 0.800619 | 1.324134e-48 | -8.615850e-47 |
| Msa0783860 | Msa0818770 | 0.817604 | 3.025167e-52 | -8.615850e-47 |
| Msa0783860 | Msa0934140 | 0.806934 | 6.462720e-50 | -8.615850e-47 |
| Msa0783860 | Msa0971650 | 0.800566 | 1.357414e-48 | -8.615850e-47 |
| Msa0783860 | Msa1063420 | 0.804892 | 1.736397e-49 | -8.615850e-47 |
| Msa0783860 | Msa1253660 | 0.807831 | 4.171045e-50 | -8.615850e-47 |
| Msa0783860 | Msa1265590 | 0.805929 | 1.052815e-49 | -8.615850e-47 |
| Msa0783860 | Msa1332050 | 0.836157 | 1.103159e-56 | -8.615850e-47 |
| Msa0783860 | Msa1420270 | 0.800935 | 1.141258e-48 | -8.615850e-47 |
| Msa0783860 | Msa1424350 | 0.800840 | 1.193326e-48 | -8.615850e-47 |
| Msa0783860 | Msa1457160 | 0.805528 | 1.278005e-49 | -8.615850e-47 |
| Msa0124450 | Msa0783860 | 0.805837 | 1.100722e-49 | -8.615850e-47 |
| Msa0127100 | Msa0783860 | 0.809463 | 1.868879e-50 | -8.615850e-47 |
| Msa0192640 | Msa0783860 | 0.807409 | 5.127201e-50 | -8.615850e-47 |
| Msa0199420 | Msa0783860 | 0.802711 | 4.928293e-49 | -8.615850e-47 |
| Msa0231190 | Msa0783860 | 0.814186 | 1.751360e-51 | -8.615850e-47 |
| Msa0389910 | Msa0783860 | 0.803569 | 3.274978e-49 | -8.615850e-47 |
| Msa0256480 | Msa0783860 | 0.807482 | 4.947294e-50 | -8.615850e-47 |
| Msa0269560 | Msa0783860 | 0.802988 | 4.319400e-49 | -8.615850e-47 |
| Msa0322900 | Msa0783860 | 0.816689 | 4.859541e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0783860 | MtrunA17_Chr5g0437691 | 97.481 | 516 | 12 | 1 | 1 | 515 | 1 | 516 | 0.0 | 1028 |
| Msa0783860 | MtrunA17_Chr5g0431661 | 61.609 | 547 | 164 | 9 | 13 | 515 | 21 | 565 | 0.0 | 629 |
| Msa0783860 | MtrunA17_Chr1g0178331 | 25.641 | 429 | 260 | 13 | 90 | 512 | 28 | 403 | 2.98e-19 | 90.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0783860 | AT5G58440.1 | 67.152 | 481 | 139 | 6 | 48 | 510 | 101 | 580 | 0.0 | 640 |
| Msa0783860 | AT5G07120.1 | 65.517 | 493 | 151 | 6 | 41 | 515 | 81 | 572 | 0.0 | 633 |
| Msa0783860 | AT5G07120.2 | 65.517 | 493 | 151 | 6 | 41 | 515 | 81 | 572 | 0.0 | 633 |
| Msa0783860 | AT5G07120.3 | 65.598 | 468 | 142 | 6 | 41 | 490 | 81 | 547 | 0.0 | 599 |
| Msa0783860 | AT5G06140.1 | 25.799 | 438 | 260 | 13 | 77 | 503 | 9 | 392 | 5.13e-22 | 98.6 |
Find 165 sgRNAs with CRISPR-Local
Find 366 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGTGTAAGGAGGAGGTTTC+GGG | 0.165443 | 5_2:+68176044 | Msa0783860:CDS |
| GGCTGCCACGGCAGCTGTTT+GGG | 0.165894 | 5_2:+68176777 | Msa0783860:CDS |
| GAGAAGTATCTGAGGAAATT+AGG | 0.188004 | 5_2:+68176638 | Msa0783860:CDS |
| GTTGCTTCATCCAGAATATT+TGG | 0.216818 | 5_2:+68178304 | Msa0783860:CDS |
| AATGAATTGAACGGTGATTT+AGG | 0.226921 | 5_2:-68175787 | None:intergenic |
| AGGCTGCCACGGCAGCTGTT+TGG | 0.229002 | 5_2:+68176776 | Msa0783860:CDS |
| AAATCGATTCTACGAGGTTT+TGG | 0.264850 | 5_2:-68175627 | None:intergenic |
| TGTTGAAGAAGATGAGTTTA+TGG | 0.268491 | 5_2:+68176928 | Msa0783860:CDS |
| ATCCGATTCGATTCAGATTT+CGG | 0.277980 | 5_2:+68175918 | Msa0783860:CDS |
| TAGTTATTAGCCGTATTAAT+TGG | 0.286864 | 5_2:+68180929 | Msa0783860:three_prime_UTR |
| AACAATTACAAGACATTTCC+AGG | 0.296839 | 5_2:-68180838 | Msa0783870:intron |
| AGCTGTTTGGGGCGGAGAGT+GGG | 0.297842 | 5_2:+68176789 | Msa0783860:CDS |
| CGGTGGTTGTTGAACGTTGC+CGG | 0.302336 | 5_2:-68175758 | None:intergenic |
| AATACGGCTAATAACTAATA+TGG | 0.303595 | 5_2:-68180923 | Msa0783870:intron |
| CTTGTCTCCACCAAATATTC+TGG | 0.315427 | 5_2:-68178314 | None:intergenic |
| CAGCTGTTTGGGGCGGAGAG+TGG | 0.335447 | 5_2:+68176788 | Msa0783860:CDS |
| TACGTTGTCGGAGCGGTTAT+CGG | 0.335566 | 5_2:+68176074 | Msa0783860:CDS |
| AACAATCTGTTAGTAATGAT+TGG | 0.339972 | 5_2:+68176885 | Msa0783860:CDS |
| AAATCTAGAGTATCATAAAA+AGG | 0.343696 | 5_2:-68180670 | Msa0783870:intron |
| TTGGTGTAAGGAGGAGGTTT+CGG | 0.349103 | 5_2:+68176043 | Msa0783860:CDS |
| TCGGAAACGGGAAAGTTGTT+TGG | 0.349786 | 5_2:-68175527 | None:intergenic |
| AGCTAGCTTCTTTACATTCA+CGG | 0.377360 | 5_2:+68178266 | Msa0783860:CDS |
| AGAAGTATCTGAGGAAATTA+GGG | 0.377649 | 5_2:+68176639 | Msa0783860:CDS |
| AAGGAGGAGGTTTCGGGAGG+TGG | 0.379579 | 5_2:+68176050 | Msa0783860:CDS |
| AAACTATCTACAAAGATTAC+AGG | 0.380213 | 5_2:-68180863 | Msa0783870:intron |
| AAACTTTGCAGGAAAATAAT+AGG | 0.382071 | 5_2:+68180359 | Msa0783860:intron |
| TTATCGTGGTTATGTGATTC+CGG | 0.384264 | 5_2:+68176101 | Msa0783860:CDS |
| ACAATCTGTTAGTAATGATT+GGG | 0.384603 | 5_2:+68176886 | Msa0783860:CDS |
| GTAACGAACTCGCTTGTTCC+AGG | 0.386518 | 5_2:+68175967 | Msa0783860:CDS |
| AACTCGAATCAAGCCGGATC+CGG | 0.388623 | 5_2:+68175883 | Msa0783860:CDS |
| AACGTTGCCGGAGGAGTTAT+CGG | 0.389957 | 5_2:-68175746 | None:intergenic |
| TTTGGATTATGGATTATTCA+TGG | 0.398633 | 5_2:-68175609 | None:intergenic |
| AACGGGAAAGTTGTTTGGAT+TGG | 0.403299 | 5_2:-68175522 | None:intergenic |
| TTAGGGTTGCATCCTGTGAT+TGG | 0.408182 | 5_2:+68176656 | Msa0783860:CDS |
| ATGACTCCATTTCATCGTCT+TGG | 0.409874 | 5_2:-68175693 | None:intergenic |
| TTCGGTTCCCGATCCGGATC+CGG | 0.411031 | 5_2:-68175896 | None:intergenic |
| GCGAGGGTTTGTTGTCAATC+AGG | 0.412246 | 5_2:+68180435 | Msa0783860:CDS |
| TGAAATTCCTCCAATTAATA+CGG | 0.412620 | 5_2:-68180939 | Msa0783870:intron |
| ATCGGATTCGGTTCCCGATC+CGG | 0.414736 | 5_2:-68175902 | None:intergenic |
| TGACTCCATTTCATCGTCTT+GGG | 0.419261 | 5_2:-68175692 | None:intergenic |
| TGTTGAGTTAACTCGGAAAC+GGG | 0.419690 | 5_2:-68175539 | None:intergenic |
| TCGGGAGGTGGTTACGTTGT+CGG | 0.422008 | 5_2:+68176062 | Msa0783860:CDS |
| GGAGAAGAAGGATAAGTTGA+TGG | 0.424046 | 5_2:+68176949 | Msa0783860:CDS |
| AGATGAGTTTATGGAGAAGA+AGG | 0.434834 | 5_2:+68176937 | Msa0783860:CDS |
| AACGGTGATTTAGGACTTTG+CGG | 0.435214 | 5_2:-68175778 | None:intergenic |
| CGGAGTTTGGTGTAAGGAGG+AGG | 0.443749 | 5_2:+68176037 | Msa0783860:CDS |
| GGAGTTATCGGCGCCGTTGT+CGG | 0.444282 | 5_2:-68175734 | None:intergenic |
| AATCTGAATCGAATCGGATT+CGG | 0.449392 | 5_2:-68175914 | None:intergenic |
| AATTCGAATCTCAAAGAGTA+AGG | 0.452607 | 5_2:+68177910 | Msa0783860:CDS |
| TACACAAACAATCAAACATC+TGG | 0.453598 | 5_2:+68177998 | Msa0783860:CDS |
| GATGCAGAAGGAGGAGTTTG+TGG | 0.457480 | 5_2:+68176595 | Msa0783860:CDS |
| GGTGAAACAATGGGTGAGCT+AGG | 0.463965 | 5_2:+68177843 | Msa0783860:CDS |
| TGGCGTCAAGGATGCTTGAT+GGG | 0.464255 | 5_2:+68176747 | Msa0783860:CDS |
| AATCAAGCCGGATCCGGATC+GGG | 0.465368 | 5_2:+68175889 | Msa0783860:CDS |
| AAAGTGGAAGGGATTTGCTT+AGG | 0.466015 | 5_2:+68176846 | Msa0783860:CDS |
| AAGCGCGAAGAACGTGATCT+TGG | 0.468626 | 5_2:-68175669 | None:intergenic |
| GTGGCGTCAAGGATGCTTGA+TGG | 0.468981 | 5_2:+68176746 | Msa0783860:CDS |
| TAGGGTTGCATCCTGTGATT+GGG | 0.469279 | 5_2:+68176657 | Msa0783860:CDS |
| CGCTTCCCAAGACGATGAAA+TGG | 0.471624 | 5_2:+68175687 | Msa0783860:CDS |
| AAAGGAGTGGCTTGCTGTGA+TGG | 0.479855 | 5_2:-68180886 | Msa0783870:intron |
| GTGTTGAGTTAACTCGGAAA+CGG | 0.485651 | 5_2:-68175540 | None:intergenic |
| GTCAGCAAAAGCATTGTTGA+TGG | 0.489842 | 5_2:-68178203 | None:intergenic |
| GCTGCCACGGCAGCTGTTTG+GGG | 0.491006 | 5_2:+68176778 | Msa0783860:CDS |
| ACTTAGCAATGTTTCTCAGC+AGG | 0.492076 | 5_2:+68176985 | Msa0783860:CDS |
| GCTGTTTGGGGCGGAGAGTG+GGG | 0.492352 | 5_2:+68176790 | Msa0783860:CDS |
| GACAGCAGCTAGAATGTACT+TGG | 0.506870 | 5_2:+68180628 | Msa0783860:exon |
| TTTGAATGATGTGGCTCAGC+CGG | 0.506966 | 5_2:+68176820 | Msa0783860:CDS |
| AACCGAAATCTGAATCGAAT+CGG | 0.507244 | 5_2:-68175920 | None:intergenic |
| GGAGCAGAGGAGATTAGCGT+TGG | 0.508817 | 5_2:+68176616 | Msa0783860:CDS |
| GGCAGGCTATGCAGAGAAGA+TGG | 0.512741 | 5_2:+68180558 | Msa0783860:intron |
| CTGCAGCTGTCAAAGCAAGC+AGG | 0.519113 | 5_2:+68177958 | Msa0783860:CDS |
| GCAAGACATGGGTGAAACAA+TGG | 0.520277 | 5_2:+68177833 | Msa0783860:CDS |
| CAAGACATGGGTGAAACAAT+GGG | 0.522777 | 5_2:+68177834 | Msa0783860:CDS |
| TCCTCACTCTTCCCAATCAC+AGG | 0.526809 | 5_2:-68176668 | None:intergenic |
| TCATCTTCTTCAACAACCAA+TGG | 0.528992 | 5_2:-68176920 | None:intergenic |
| TTGAAAGAATTGACAAGGAA+AGG | 0.529294 | 5_2:+68180389 | Msa0783860:CDS |
| GATAAACTCCACGAATACCT+TGG | 0.530791 | 5_2:+68178169 | Msa0783860:CDS |
| ATAAACTCCACGAATACCTT+GGG | 0.530869 | 5_2:+68178170 | Msa0783860:CDS |
| GTTACCTCTTGCTCCTCTTG+AGG | 0.531300 | 5_2:-68175949 | None:intergenic |
| GTGGCTCAGCCGGCGAAAAG+TGG | 0.533089 | 5_2:+68176830 | Msa0783860:CDS |
| GAATCAAGCCGGATCCGGAT+CGG | 0.536739 | 5_2:+68175888 | Msa0783860:CDS |
| CGGAGAAAAGTTCGGTAGAG+AGG | 0.538061 | 5_2:+68176130 | Msa0783860:CDS |
| CTCAGCCGGCGAAAAGTGGA+AGG | 0.538183 | 5_2:+68176834 | Msa0783860:CDS |
| TTATTAGCCGTATTAATTGG+AGG | 0.538590 | 5_2:+68180932 | Msa0783860:three_prime_UTR |
| ATGGGGCGGTGAGGCTGCCA+CGG | 0.539166 | 5_2:+68176765 | Msa0783860:CDS |
| AAGATTGCTTCAGCGTAAGA+AGG | 0.540494 | 5_2:-68175820 | None:intergenic |
| GGTTGTTGATTTGAATGATG+TGG | 0.541262 | 5_2:+68176811 | Msa0783860:CDS |
| TAGAGAGTATGAACGAATCA+AGG | 0.545450 | 5_2:+68178408 | Msa0783860:CDS |
| TGTCAAGTTTCAGCAAGACA+TGG | 0.545641 | 5_2:+68177821 | Msa0783860:CDS |
| TAGGGTTTGATCGTGACCGT+TGG | 0.545881 | 5_2:-68175857 | None:intergenic |
| GTTGATGAGGACGACGGATG+TGG | 0.546141 | 5_2:+68176727 | Msa0783860:CDS |
| TTATGTGATTCCGGTGAGGC+CGG | 0.549014 | 5_2:+68176110 | Msa0783860:CDS |
| TCCGCCCCAAACAGCTGCCG+TGG | 0.549263 | 5_2:-68176782 | None:intergenic |
| GGTGAGGCCGGAGAAAAGTT+CGG | 0.551056 | 5_2:+68176122 | Msa0783860:CDS |
| GAAAAGTTCGGTAGAGAGGA+AGG | 0.555027 | 5_2:+68176134 | Msa0783860:CDS |
| AGGAGGAGTTTGTGGAGCAG+AGG | 0.558001 | 5_2:+68176603 | Msa0783860:CDS |
| GCATTGTCCCAAGGTATTCG+TGG | 0.559449 | 5_2:-68178177 | None:intergenic |
| TAATATATCATGTACAACTC+TGG | 0.561621 | 5_2:-68180764 | Msa0783870:intron |
| GTCAAGGATGCTTGATGGGG+CGG | 0.562029 | 5_2:+68176751 | Msa0783860:CDS |
| ACTATGAAAAGCCGCCTCAT+CGG | 0.563542 | 5_2:-68180981 | Msa0783870:intron |
| GCCACGGCAGCTGTTTGGGG+CGG | 0.564908 | 5_2:+68176781 | Msa0783860:CDS |
| CTGTCAACAATGCACTTGAT+CGG | 0.565466 | 5_2:-68178225 | None:intergenic |
| AACGGCGCCGATAACTCCTC+CGG | 0.568830 | 5_2:+68175739 | Msa0783860:CDS |
| GAATTTGTGTTGAGTTAACT+CGG | 0.569977 | 5_2:-68175546 | None:intergenic |
| AGCACTCTCAGTTACTCTAA+CGG | 0.577710 | 5_2:-68178371 | None:intergenic |
| GCTTCATCCAGAATATTTGG+TGG | 0.579181 | 5_2:+68178307 | Msa0783860:CDS |
| AAGGGAAGTTGCCGTTGATG+AGG | 0.580166 | 5_2:+68176714 | Msa0783860:CDS |
| TTCGGTTTCTGATCCTCAAG+AGG | 0.582017 | 5_2:+68175936 | Msa0783860:CDS |
| AGAGAAGATGGCTGCTGTGT+GGG | 0.582156 | 5_2:+68180570 | Msa0783860:CDS |
| CGCCGTTGTCGGTGTCGTCG+TGG | 0.583473 | 5_2:-68175723 | None:intergenic |
| GTCAAGTTTCAGCAAGACAT+GGG | 0.591750 | 5_2:+68177822 | Msa0783860:CDS |
| AACAATGGGTGAGCTAGGGT+TGG | 0.592568 | 5_2:+68177848 | Msa0783860:CDS |
| AAGAAGAAGAAGATGAAACT+CGG | 0.594006 | 5_2:-68175578 | None:intergenic |
| GTTACTAAGCTTGTTTGACG+TGG | 0.594146 | 5_2:-68175426 | None:intergenic |
| TTGGGGAGGTGCTAAGCCAT+TGG | 0.595216 | 5_2:+68176904 | Msa0783860:CDS |
| ACTTTCAAAACATGCTGCGA+GGG | 0.598205 | 5_2:+68180419 | Msa0783860:CDS |
| TTCACTTCATTCGACACCAA+CGG | 0.599087 | 5_2:+68175841 | Msa0783860:CDS |
| TATTTGGTGGAGACAAGTCT+AGG | 0.601151 | 5_2:+68178320 | Msa0783860:CDS |
| TGTAAGGAGGAGGTTTCGGG+AGG | 0.601303 | 5_2:+68176047 | Msa0783860:CDS |
| GTTGTCGGAGCGGTTATCGG+AGG | 0.601385 | 5_2:+68176077 | Msa0783860:CDS |
| GGATGCTTGATGGGGCGGTG+AGG | 0.604410 | 5_2:+68176756 | Msa0783860:CDS |
| AATCGGAGTTTGGTGTAAGG+AGG | 0.604994 | 5_2:+68176034 | Msa0783860:CDS |
| GGCGTCAAGGATGCTTGATG+GGG | 0.610367 | 5_2:+68176748 | Msa0783860:CDS |
| ACATCCGTCGTCCTCATCAA+CGG | 0.610443 | 5_2:-68176725 | None:intergenic |
| GTTTGGATTGGATAATCACA+TGG | 0.612529 | 5_2:-68175510 | None:intergenic |
| ATTCGAATCTCAAAGAGTAA+GGG | 0.612875 | 5_2:+68177911 | Msa0783860:CDS |
| CTAGAAAACTCGAATCAAGC+CGG | 0.614203 | 5_2:+68175877 | Msa0783860:CDS |
| CGGTTATCGGAGGTTTATCG+TGG | 0.619246 | 5_2:+68176087 | Msa0783860:CDS |
| GGACGACGGATGTGGCGTCA+AGG | 0.620316 | 5_2:+68176735 | Msa0783860:CDS |
| CTCCACGACGACACCGACAA+CGG | 0.620443 | 5_2:+68175721 | Msa0783860:CDS |
| GTGAAACAATGGGTGAGCTA+GGG | 0.620469 | 5_2:+68177844 | Msa0783860:CDS |
| TGGTTGTTGAACGTTGCCGG+AGG | 0.621381 | 5_2:-68175755 | None:intergenic |
| GACTTTCAAAACATGCTGCG+AGG | 0.622052 | 5_2:+68180418 | Msa0783860:CDS |
| GTATGATAACTACTTCCACC+TGG | 0.623384 | 5_2:-68175985 | None:intergenic |
| GTGGAGACAAGTCTAGGATG+CGG | 0.623924 | 5_2:+68178326 | Msa0783860:CDS |
| TGATCCTCAAGAGGAGCAAG+AGG | 0.633181 | 5_2:+68175945 | Msa0783860:CDS |
| CTATCAGGTGATGCAGAAGG+AGG | 0.634617 | 5_2:+68176586 | Msa0783860:intron |
| ATTCTATCAGGTGATGCAGA+AGG | 0.635217 | 5_2:+68176583 | Msa0783860:intron |
| TGTCTTGCTGAAACTTGACA+AGG | 0.636299 | 5_2:-68177818 | None:intergenic |
| TTTGATGTAATAAACCGATG+AGG | 0.640009 | 5_2:+68180967 | Msa0783860:three_prime_UTR |
| AAAATACTTTGAGCATTCGG+CGG | 0.644491 | 5_2:+68180725 | Msa0783860:three_prime_UTR |
| GTCTTGCTGAAACTTGACAA+GGG | 0.646463 | 5_2:-68177817 | None:intergenic |
| CAATCTGTTAGTAATGATTG+GGG | 0.646740 | 5_2:+68176887 | Msa0783860:CDS |
| AATTATCAAAGATCTCAACC+TGG | 0.649241 | 5_2:+68180820 | Msa0783860:three_prime_UTR |
| GGATCGAGGAATGAATTGAA+CGG | 0.649991 | 5_2:-68175796 | None:intergenic |
| TCAGCCGGCGAAAAGTGGAA+GGG | 0.652000 | 5_2:+68176835 | Msa0783860:CDS |
| ACGGCTAATAACTAATATGG+AGG | 0.653150 | 5_2:-68180920 | Msa0783870:intron |
| ATTGCTTCAGCGTAAGAAGG+AGG | 0.654082 | 5_2:-68175817 | None:intergenic |
| TGATGGCTAGCATTGTCCCA+AGG | 0.654220 | 5_2:-68178186 | None:intergenic |
| TGAGCTTGAAAGAATTGACA+AGG | 0.655714 | 5_2:+68180384 | Msa0783860:CDS |
| AGGTGGTTACGTTGTCGGAG+CGG | 0.656214 | 5_2:+68176067 | Msa0783860:CDS |
| GATGTAATAAACCGATGAGG+CGG | 0.659641 | 5_2:+68180970 | Msa0783860:three_prime_UTR |
| CGTTGTCGGTGTCGTCGTGG+AGG | 0.663809 | 5_2:-68175720 | None:intergenic |
| CAGCGTAAGAAGGAGGATCG+AGG | 0.672129 | 5_2:-68175810 | None:intergenic |
| TAGCGTTGGAGAAGTATCTG+AGG | 0.672262 | 5_2:+68176630 | Msa0783860:CDS |
| CAGAGAAGATGGCTGCTGTG+TGG | 0.678220 | 5_2:+68180569 | Msa0783860:CDS |
| ACGAACTCGCTTGTTCCAGG+TGG | 0.679084 | 5_2:+68175970 | Msa0783860:CDS |
| TTTGGATTGGATAATCACAT+GGG | 0.691871 | 5_2:-68175509 | None:intergenic |
| TCTGTTAGTAATGATTGGGG+AGG | 0.700339 | 5_2:+68176890 | Msa0783860:CDS |
| TCCTGTGATTGGGAAGAGTG+AGG | 0.720504 | 5_2:+68176667 | Msa0783860:CDS |
| GTGGTTATGTGATTCCGGTG+AGG | 0.721489 | 5_2:+68176106 | Msa0783860:CDS |
| GGTGATTTAGGACTTTGCGG+TGG | 0.721823 | 5_2:-68175775 | None:intergenic |
| TTTCGAAAATCGATTCTACG+AGG | 0.730440 | 5_2:-68175633 | None:intergenic |
| GTTGCCGTTGATGAGGACGA+CGG | 0.733554 | 5_2:+68176721 | Msa0783860:CDS |
| ATACGTATCTGATTACGACG+AGG | 0.794773 | 5_2:+68176004 | Msa0783860:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAATACATTTTTTGTATT+CGG | + | chr5_2:68178437-68178456 | Msa0783860:intron | 10.0% |
| !!! | AAAAAGAAAAAATAGTTTTA+AGG | + | chr5_2:68180276-68180295 | Msa0783860:intron | 10.0% |
| !! | ATTTACATATTATTTCAAAA+AGG | - | chr5_2:68180319-68180338 | Msa0783870:intron | 10.0% |
| !!! | TAATCATTTTTTCATTACTT+TGG | + | chr5_2:68175400-68175419 | Msa0783860:five_prime_UTR | 15.0% |
| !! | AAATTGTTAATTACAATAAG+TGG | - | chr5_2:68176503-68176522 | None:intergenic | 15.0% |
| !! | TCATCATACAATTATATAAT+TGG | - | chr5_2:68178069-68178088 | None:intergenic | 15.0% |
| !!! | ATAGAAATACAGATTTTAAA+TGG | - | chr5_2:68180252-68180271 | Msa0783870:intron | 15.0% |
| !!! | GTAGAATCAATTATCAATTT+TGG | + | chr5_2:68176386-68176405 | Msa0783860:intron | 20.0% |
| !!! | TAGTTAAATTAGTTTCTAGT+TGG | + | chr5_2:68176455-68176474 | Msa0783860:intron | 20.0% |
| !! | CAAAATATTGATATTAAGCA+CGG | - | chr5_2:68176560-68176579 | None:intergenic | 20.0% |
| !!! | AATATTTTGCATATTCTATC+AGG | + | chr5_2:68176571-68176590 | Msa0783860:intron | 20.0% |
| !!! | ACAAGATTTTAAATGATCAT+TGG | - | chr5_2:68177504-68177523 | None:intergenic | 20.0% |
| !!! | ATCATTTAAAATCTTGTTTG+TGG | + | chr5_2:68177507-68177526 | Msa0783860:intron | 20.0% |
| !! | ACTAAACATGATATAATAGT+CGG | + | chr5_2:68177593-68177612 | Msa0783860:intron | 20.0% |
| !! | TATAGACACATGAATATATA+TGG | - | chr5_2:68178586-68178605 | None:intergenic | 20.0% |
| !!! | TCTTTGATAATCTAATTAGA+TGG | - | chr5_2:68178793-68178812 | None:intergenic | 20.0% |
| !! | TTTACAAATGCATCAAAATA+TGG | - | chr5_2:68178966-68178985 | None:intergenic | 20.0% |
| !!! | AAACATTGGATTTTACATAT+AGG | - | chr5_2:68179087-68179106 | None:intergenic | 20.0% |
| !!! | ATTCTGGTTTTTTAAAACAT+TGG | - | chr5_2:68179101-68179120 | None:intergenic | 20.0% |
| !! | TTATCAAAATCATCAAATAG+TGG | + | chr5_2:68179227-68179246 | Msa0783860:intron | 20.0% |
| !!! | TTTTATACTTGTTATGTACT+TGG | - | chr5_2:68179426-68179445 | None:intergenic | 20.0% |
| !! | AAGTACATAACAAGTATAAA+AGG | + | chr5_2:68179425-68179444 | Msa0783860:intron | 20.0% |
| !! | TCAAAAATCAAAATCACTAA+AGG | - | chr5_2:68180063-68180082 | None:intergenic | 20.0% |
| !! | AATAATATCAAGTGTAAATG+TGG | + | chr5_2:68180336-68180355 | Msa0783860:intron | 20.0% |
| !!! | AAATCTAGAGTATCATAAAA+AGG | - | chr5_2:68180673-68180692 | Msa0783870:intron | 20.0% |
| !!! | ATTTTTATACTACATAAGCT+TGG | - | chr5_2:68180710-68180729 | Msa0783870:intron | 20.0% |
| !! | ATAAAAATACTTTGAGCATT+CGG | + | chr5_2:68180722-68180741 | Msa0783860:three_prime_UTR | 20.0% |
| !! | TTTGGATTATGGATTATTCA+TGG | - | chr5_2:68175612-68175631 | None:intergenic | 25.0% |
| ! | TTTGTTAGTTGCAAATTAGT+CGG | + | chr5_2:68176174-68176193 | Msa0783860:intron | 25.0% |
| ! | TTAATTACAATAAGTGGTGT+GGG | - | chr5_2:68176497-68176516 | None:intergenic | 25.0% |
| ! | AACAATCTGTTAGTAATGAT+TGG | + | chr5_2:68176885-68176904 | Msa0783860:CDS | 25.0% |
| ! | ACAATCTGTTAGTAATGATT+GGG | + | chr5_2:68176886-68176905 | Msa0783860:CDS | 25.0% |
| ! | AGTAAAATGTAGATTCATTG+TGG | + | chr5_2:68177078-68177097 | Msa0783860:intron | 25.0% |
| !!! | TTTTAACTAACATCACATTG+CGG | - | chr5_2:68177256-68177275 | None:intergenic | 25.0% |
| ! | ATGTGATGTTAGTTAAAAGT+AGG | + | chr5_2:68177258-68177277 | Msa0783860:intron | 25.0% |
| !! | ATTTTACTTCTTTGATTGCT+AGG | + | chr5_2:68177749-68177768 | Msa0783860:intron | 25.0% |
| !! | TTTTACTTCTTTGATTGCTA+GGG | + | chr5_2:68177750-68177769 | Msa0783860:intron | 25.0% |
| ! | TGTGTCAAATTATCAAATAG+TGG | - | chr5_2:68178693-68178712 | None:intergenic | 25.0% |
| ! | AATTGCATTGCATTATAAAG+AGG | - | chr5_2:68178887-68178906 | None:intergenic | 25.0% |
| !! | TTGGATTTTACATAATGAGA+TGG | - | chr5_2:68179297-68179316 | None:intergenic | 25.0% |
| ! | CTCAATGATCAATAAAACAT+TGG | - | chr5_2:68179316-68179335 | None:intergenic | 25.0% |
| ! | TAGATATGCCTAAAATGATT+AGG | + | chr5_2:68179785-68179804 | Msa0783860:intron | 25.0% |
| ! | CTTTATAGATGGATAAAAAG+GGG | - | chr5_2:68179850-68179869 | None:intergenic | 25.0% |
| ! | CCTTTATAGATGGATAAAAA+GGG | - | chr5_2:68179851-68179870 | None:intergenic | 25.0% |
| ! | AAATCATAAGATAGGTTCAA+AGG | - | chr5_2:68180140-68180159 | None:intergenic | 25.0% |
| ! | GCTTTCATAAATCATAAGAT+AGG | - | chr5_2:68180148-68180167 | None:intergenic | 25.0% |
| ! | AAACTTTGCAGGAAAATAAT+AGG | + | chr5_2:68180359-68180378 | Msa0783860:intron | 25.0% |
| !! | CTCTAGATTTTTATCTCATT+AGG | + | chr5_2:68180683-68180702 | Msa0783860:three_prime_UTR | 25.0% |
| ! | TAATATATCATGTACAACTC+TGG | - | chr5_2:68180767-68180786 | Msa0783870:intron | 25.0% |
| ! | AAACTATCTACAAAGATTAC+AGG | - | chr5_2:68180866-68180885 | Msa0783870:intron | 25.0% |
| ! | ATGGAGGAGAAAAAAAAAAA+AGG | - | chr5_2:68180907-68180926 | Msa0783870:intron | 25.0% |
| ! | AATACGGCTAATAACTAATA+TGG | - | chr5_2:68180926-68180945 | Msa0783870:intron | 25.0% |
| ! | TAGTTATTAGCCGTATTAAT+TGG | + | chr5_2:68180929-68180948 | Msa0783860:three_prime_UTR | 25.0% |
| ! | TGAAATTCCTCCAATTAATA+CGG | - | chr5_2:68180942-68180961 | Msa0783870:intron | 25.0% |
| ! | TTTGGATTGGATAATCACAT+GGG | - | chr5_2:68175512-68175531 | None:intergenic | 30.0% |
| GAATTTGTGTTGAGTTAACT+CGG | - | chr5_2:68175549-68175568 | None:intergenic | 30.0% | |
| AAGAAGAAGAAGATGAAACT+CGG | - | chr5_2:68175581-68175600 | None:intergenic | 30.0% | |
| AATGAATTGAACGGTGATTT+AGG | - | chr5_2:68175790-68175809 | None:intergenic | 30.0% | |
| AACTAATCCAAGTGTATGTT+TGG | - | chr5_2:68176429-68176448 | None:intergenic | 30.0% | |
| GTTAATTACAATAAGTGGTG+TGG | - | chr5_2:68176498-68176517 | None:intergenic | 30.0% | |
| !! | AGAAGTATCTGAGGAAATTA+GGG | + | chr5_2:68176639-68176658 | Msa0783860:CDS | 30.0% |
| CAATCTGTTAGTAATGATTG+GGG | + | chr5_2:68176887-68176906 | Msa0783860:CDS | 30.0% | |
| TGTTGAAGAAGATGAGTTTA+TGG | + | chr5_2:68176928-68176947 | Msa0783860:CDS | 30.0% | |
| TGATGCATTTAATTCACAGT+AGG | + | chr5_2:68177169-68177188 | Msa0783860:intron | 30.0% | |
| !!! | GAAGTTAGGGTTTTAGAAAA+AGG | + | chr5_2:68177195-68177214 | Msa0783860:intron | 30.0% |
| AAAGGTTCATAACCACAATA+TGG | + | chr5_2:68177213-68177232 | Msa0783860:intron | 30.0% | |
| AAGGTTCATAACCACAATAT+GGG | + | chr5_2:68177214-68177233 | Msa0783860:intron | 30.0% | |
| ! | TTAGCTCCAAAGTTAATTTG+AGG | + | chr5_2:68177367-68177386 | Msa0783860:intron | 30.0% |
| ! | TCCAAAGTTAATTTGAGGTT+AGG | + | chr5_2:68177372-68177391 | Msa0783860:intron | 30.0% |
| TCCTAACCTCAAATTAACTT+TGG | - | chr5_2:68177376-68177395 | None:intergenic | 30.0% | |
| TTGTGGTGTAATCAAGTATT+AGG | + | chr5_2:68177524-68177543 | Msa0783860:intron | 30.0% | |
| !! | TCTAGTGTCATTGTGTTTTA+TGG | + | chr5_2:68177637-68177656 | Msa0783860:intron | 30.0% |
| ! | ATGGTAATGCAATTCTTCAA+AGG | - | chr5_2:68177683-68177702 | None:intergenic | 30.0% |
| ! | TGGAACTGAATGAATTGTTT+TGG | + | chr5_2:68177714-68177733 | Msa0783860:intron | 30.0% |
| !!! | CTGAATGAATTGTTTTGGAA+TGG | + | chr5_2:68177719-68177738 | Msa0783860:intron | 30.0% |
| AATTCGAATCTCAAAGAGTA+AGG | + | chr5_2:68177910-68177929 | Msa0783860:CDS | 30.0% | |
| ATTCGAATCTCAAAGAGTAA+GGG | + | chr5_2:68177911-68177930 | Msa0783860:CDS | 30.0% | |
| TACACAAACAATCAAACATC+TGG | + | chr5_2:68177998-68178017 | Msa0783860:CDS | 30.0% | |
| AGACAGCTAAAGATTATACT+TGG | - | chr5_2:68178109-68178128 | None:intergenic | 30.0% | |
| ! | TAATGTTTTATGTGTGTTGC+AGG | + | chr5_2:68178147-68178166 | Msa0783860:intron | 30.0% |
| ATGTTGATATGTATGCTGAA+GGG | - | chr5_2:68178525-68178544 | None:intergenic | 30.0% | |
| TATGTTGATATGTATGCTGA+AGG | - | chr5_2:68178526-68178545 | None:intergenic | 30.0% | |
| !!! | CATATTTTTGCTTTTAGAGC+TGG | + | chr5_2:68178542-68178561 | Msa0783860:intron | 30.0% |
| TACCAGTCAAATTTATACCA+GGG | - | chr5_2:68178837-68178856 | None:intergenic | 30.0% | |
| GTCTTTATAGACAAGTTTCA+TGG | + | chr5_2:68178907-68178926 | Msa0783860:intron | 30.0% | |
| TCATCAATCAATAGCTGATT+TGG | + | chr5_2:68179024-68179043 | Msa0783860:intron | 30.0% | |
| TACAATTCACTAATCCAATC+AGG | + | chr5_2:68179353-68179372 | Msa0783860:intron | 30.0% | |
| ACAATTCACTAATCCAATCA+GGG | + | chr5_2:68179354-68179373 | Msa0783860:intron | 30.0% | |
| TGCAAGCATACAATATAAGT+TGG | + | chr5_2:68179384-68179403 | Msa0783860:intron | 30.0% | |
| !! | ATACAATATAAGTTGGTGAG+TGG | + | chr5_2:68179391-68179410 | Msa0783860:intron | 30.0% |
| !! | ATACTTGTTATGTACTTGGT+TGG | - | chr5_2:68179422-68179441 | None:intergenic | 30.0% |
| AGTGCTTAAAATTTCAACAC+AGG | + | chr5_2:68179471-68179490 | Msa0783860:intron | 30.0% | |
| ATCCAAGGTATAACTTAACA+TGG | + | chr5_2:68179539-68179558 | Msa0783860:intron | 30.0% | |
| ATCCATGTTAAGTTATACCT+TGG | - | chr5_2:68179544-68179563 | None:intergenic | 30.0% | |
| !! | ATGAGTCTTTAACTTGATTG+TGG | + | chr5_2:68179751-68179770 | Msa0783860:intron | 30.0% |
| ! | CTACAAAGCCTAATCATTTT+AGG | - | chr5_2:68179796-68179815 | None:intergenic | 30.0% |
| ! | CCCTTTTTATCCATCTATAA+AGG | + | chr5_2:68179848-68179867 | Msa0783860:intron | 30.0% |
| GCCTTTATAGATGGATAAAA+AGG | - | chr5_2:68179852-68179871 | None:intergenic | 30.0% | |
| !! | GTTTGAGACTTCATTTTGTT+GGG | - | chr5_2:68179913-68179932 | None:intergenic | 30.0% |
| !! | AGTTTGAGACTTCATTTTGT+TGG | - | chr5_2:68179914-68179933 | None:intergenic | 30.0% |
| AGAAAAGAGAAGATAAACGA+GGG | - | chr5_2:68180464-68180483 | Msa0783870:intron | 30.0% | |
| AAGAAAAGAGAAGATAAACG+AGG | - | chr5_2:68180465-68180484 | Msa0783870:intron | 30.0% | |
| ! | GTTTATCTTCTCTTTTCTTC+AGG | + | chr5_2:68180466-68180485 | Msa0783860:intron | 30.0% |
| AATTATCAAAGATCTCAACC+TGG | + | chr5_2:68180820-68180839 | Msa0783860:three_prime_UTR | 30.0% | |
| AACAATTACAAGACATTTCC+AGG | - | chr5_2:68180841-68180860 | Msa0783870:intron | 30.0% | |
| GGAGAAAAAAAAAAAAGGAG+TGG | - | chr5_2:68180902-68180921 | Msa0783870:intron | 30.0% | |
| TTATTAGCCGTATTAATTGG+AGG | + | chr5_2:68180932-68180951 | Msa0783860:three_prime_UTR | 30.0% | |
| TTTGATGTAATAAACCGATG+AGG | + | chr5_2:68180967-68180986 | Msa0783860:three_prime_UTR | 30.0% | |
| ! | GTTTGGATTGGATAATCACA+TGG | - | chr5_2:68175513-68175532 | None:intergenic | 35.0% |
| !!! | TTCTACGAGGTTTTGGATTA+TGG | - | chr5_2:68175623-68175642 | None:intergenic | 35.0% |
| !! | AAATCGATTCTACGAGGTTT+TGG | - | chr5_2:68175630-68175649 | None:intergenic | 35.0% |
| ! | TTTCGAAAATCGATTCTACG+AGG | - | chr5_2:68175636-68175655 | None:intergenic | 35.0% |
| AATCTGAATCGAATCGGATT+CGG | - | chr5_2:68175917-68175936 | None:intergenic | 35.0% | |
| ! | ATCCGATTCGATTCAGATTT+CGG | + | chr5_2:68175918-68175937 | Msa0783860:CDS | 35.0% |
| AACCGAAATCTGAATCGAAT+CGG | - | chr5_2:68175923-68175942 | None:intergenic | 35.0% | |
| !! | AAAAATCGGAGTTTGGTGTA+AGG | + | chr5_2:68176031-68176050 | Msa0783860:CDS | 35.0% |
| TTATCGTGGTTATGTGATTC+CGG | + | chr5_2:68176101-68176120 | Msa0783860:CDS | 35.0% | |
| AAGTTCAAGTGATTCGTGTT+TGG | + | chr5_2:68176278-68176297 | Msa0783860:intron | 35.0% | |
| GTTTGGATACATTCATGTAG+AGG | + | chr5_2:68176295-68176314 | Msa0783860:intron | 35.0% | |
| ! | AATTGATTCTACTCGAAGCT+AGG | - | chr5_2:68176378-68176397 | None:intergenic | 35.0% |
| ! | TGTTTGGTTCCATTTCTAGA+GGG | - | chr5_2:68176413-68176432 | None:intergenic | 35.0% |
| ! | ATGTTTGGTTCCATTTCTAG+AGG | - | chr5_2:68176414-68176433 | None:intergenic | 35.0% |
| AATGGAACCAAACATACACT+TGG | + | chr5_2:68176419-68176438 | Msa0783860:intron | 35.0% | |
| !! | GAGAAGTATCTGAGGAAATT+AGG | + | chr5_2:68176638-68176657 | Msa0783860:CDS | 35.0% |
| !! | GGTTGTTGATTTGAATGATG+TGG | + | chr5_2:68176811-68176830 | Msa0783860:CDS | 35.0% |
| !! | GGATTTGCTTAGGATTTTCA+AGG | + | chr5_2:68176856-68176875 | Msa0783860:CDS | 35.0% |
| TCATCTTCTTCAACAACCAA+TGG | - | chr5_2:68176923-68176942 | None:intergenic | 35.0% | |
| AGATGAGTTTATGGAGAAGA+AGG | + | chr5_2:68176937-68176956 | Msa0783860:CDS | 35.0% | |
| ! | TTCACAGTAGGTTTGAAGTT+AGG | + | chr5_2:68177181-68177200 | Msa0783860:intron | 35.0% |
| ! | TCACAGTAGGTTTGAAGTTA+GGG | + | chr5_2:68177182-68177201 | Msa0783860:intron | 35.0% |
| GAGATATCAAACCCATATTG+TGG | - | chr5_2:68177228-68177247 | None:intergenic | 35.0% | |
| GTTAAAAGTAGGACTCATTG+TGG | + | chr5_2:68177269-68177288 | Msa0783860:intron | 35.0% | |
| !!! | ATGCAGACGCAATTCTTTTT+TGG | - | chr5_2:68177402-68177421 | None:intergenic | 35.0% |
| AAAAAAGAATTGCGTCTGCA+TGG | + | chr5_2:68177401-68177420 | Msa0783860:intron | 35.0% | |
| ATTCAGATATGACCCAAGTA+TGG | - | chr5_2:68177459-68177478 | None:intergenic | 35.0% | |
| TCAACTAGACGAAAGAGAAA+AGG | - | chr5_2:68177565-68177584 | None:intergenic | 35.0% | |
| !!! | CATTACCATTTTTTGTCACG+TGG | + | chr5_2:68177694-68177713 | Msa0783860:intron | 35.0% |
| CAGCTAAAGATTATACTTGG+AGG | - | chr5_2:68178106-68178125 | None:intergenic | 35.0% | |
| ATAAACTCCACGAATACCTT+GGG | + | chr5_2:68178170-68178189 | Msa0783860:CDS | 35.0% | |
| ! | AGCTAGCTTCTTTACATTCA+CGG | + | chr5_2:68178266-68178285 | Msa0783860:CDS | 35.0% |
| GTTGCTTCATCCAGAATATT+TGG | + | chr5_2:68178304-68178323 | Msa0783860:CDS | 35.0% | |
| ! | TAGAGAGTATGAACGAATCA+AGG | + | chr5_2:68178408-68178427 | Msa0783860:CDS | 35.0% |
| ATCGAAGTTACAGATGCTAA+GGG | - | chr5_2:68178473-68178492 | None:intergenic | 35.0% | |
| AATCGAAGTTACAGATGCTA+AGG | - | chr5_2:68178474-68178493 | None:intergenic | 35.0% | |
| TGTTGATATGTATGCTGAAG+GGG | - | chr5_2:68178524-68178543 | None:intergenic | 35.0% | |
| CAATAACCTGCATAACCTTA+TGG | + | chr5_2:68178754-68178773 | Msa0783860:intron | 35.0% | |
| ACTTATCCATAAGGTTATGC+AGG | - | chr5_2:68178763-68178782 | None:intergenic | 35.0% | |
| !! | GGCATTGATACTTATCCATA+AGG | - | chr5_2:68178772-68178791 | None:intergenic | 35.0% |
| CTACCAGTCAAATTTATACC+AGG | - | chr5_2:68178838-68178857 | None:intergenic | 35.0% | |
| AACTTGACTTCTAAATCTGC+TGG | + | chr5_2:68179058-68179077 | Msa0783860:intron | 35.0% | |
| CCAAATCAGCTATTACATTC+TGG | - | chr5_2:68179117-68179136 | None:intergenic | 35.0% | |
| CCAGAATGTAATAGCTGATT+TGG | + | chr5_2:68179114-68179133 | Msa0783860:intron | 35.0% | |
| TCATCAAATAGTGGTAGATC+TGG | + | chr5_2:68179236-68179255 | Msa0783860:intron | 35.0% | |
| !! | TGGATTAGTGAATTGTAGAC+TGG | - | chr5_2:68179350-68179369 | None:intergenic | 35.0% |
| CATAACAAGTATAAAAGGCG+AGG | + | chr5_2:68179430-68179449 | Msa0783860:intron | 35.0% | |
| CGCATTCTATTCAAGTCTAT+AGG | - | chr5_2:68179714-68179733 | None:intergenic | 35.0% | |
| ACTTGAATAGAATGCGAGTT+TGG | + | chr5_2:68179718-68179737 | Msa0783860:intron | 35.0% | |
| CTTGAATAGAATGCGAGTTT+GGG | + | chr5_2:68179719-68179738 | Msa0783860:intron | 35.0% | |
| TTGAATAGAATGCGAGTTTG+GGG | + | chr5_2:68179720-68179739 | Msa0783860:intron | 35.0% | |
| GGAATGTTTGATGCAATCTA+TGG | - | chr5_2:68179829-68179848 | None:intergenic | 35.0% | |
| ! | TTCATTTTGTTGGGAGCTAT+GGG | - | chr5_2:68179904-68179923 | None:intergenic | 35.0% |
| AGAAAACACAGACATAACCA+TGG | + | chr5_2:68179936-68179955 | Msa0783860:intron | 35.0% | |
| TGATGAATCAAATGGCAATG+AGG | + | chr5_2:68180006-68180025 | Msa0783860:intron | 35.0% | |
| GATGAATCAAATGGCAATGA+GGG | + | chr5_2:68180007-68180026 | Msa0783860:intron | 35.0% | |
| ATGAATCAAATGGCAATGAG+GGG | + | chr5_2:68180008-68180027 | Msa0783860:intron | 35.0% | |
| CAAAATCACTAAAGGCCAAA+GGG | - | chr5_2:68180055-68180074 | None:intergenic | 35.0% | |
| TCAAAATCACTAAAGGCCAA+AGG | - | chr5_2:68180056-68180075 | None:intergenic | 35.0% | |
| ! | AACTGATGGACAAAATCACA+AGG | - | chr5_2:68180087-68180106 | None:intergenic | 35.0% |
| GCATAACAAGTTCAAACTGA+TGG | - | chr5_2:68180101-68180120 | None:intergenic | 35.0% | |
| TGTAAATGTGGAAACTTTGC+AGG | + | chr5_2:68180348-68180367 | Msa0783860:intron | 35.0% | |
| AAAATACTTTGAGCATTCGG+CGG | + | chr5_2:68180725-68180744 | Msa0783860:three_prime_UTR | 35.0% | |
| ACGGCTAATAACTAATATGG+AGG | - | chr5_2:68180923-68180942 | Msa0783870:intron | 35.0% | |
| ! | GTTACTAAGCTTGTTTGACG+TGG | - | chr5_2:68175429-68175448 | None:intergenic | 40.0% |
| ! | TTTTGTGATGTGTCACGTTC+AGG | - | chr5_2:68175461-68175480 | None:intergenic | 40.0% |
| AACGGGAAAGTTGTTTGGAT+TGG | - | chr5_2:68175525-68175544 | None:intergenic | 40.0% | |
| TGTTGAGTTAACTCGGAAAC+GGG | - | chr5_2:68175542-68175561 | None:intergenic | 40.0% | |
| GTGTTGAGTTAACTCGGAAA+CGG | - | chr5_2:68175543-68175562 | None:intergenic | 40.0% | |
| TGACTCCATTTCATCGTCTT+GGG | - | chr5_2:68175695-68175714 | None:intergenic | 40.0% | |
| ATGACTCCATTTCATCGTCT+TGG | - | chr5_2:68175696-68175715 | None:intergenic | 40.0% | |
| ! | AACGGTGATTTAGGACTTTG+CGG | - | chr5_2:68175781-68175800 | None:intergenic | 40.0% |
| GGATCGAGGAATGAATTGAA+CGG | - | chr5_2:68175799-68175818 | None:intergenic | 40.0% | |
| AAGATTGCTTCAGCGTAAGA+AGG | - | chr5_2:68175823-68175842 | None:intergenic | 40.0% | |
| TTCACTTCATTCGACACCAA+CGG | + | chr5_2:68175841-68175860 | Msa0783860:CDS | 40.0% | |
| !! | GGCTTGATTCGAGTTTTCTA+GGG | - | chr5_2:68175878-68175897 | None:intergenic | 40.0% |
| CTAGAAAACTCGAATCAAGC+CGG | + | chr5_2:68175877-68175896 | Msa0783860:CDS | 40.0% | |
| GTATGATAACTACTTCCACC+TGG | - | chr5_2:68175988-68176007 | None:intergenic | 40.0% | |
| ATACGTATCTGATTACGACG+AGG | + | chr5_2:68176004-68176023 | Msa0783860:CDS | 40.0% | |
| TACGACGAGGACTGAAAAAT+CGG | + | chr5_2:68176017-68176036 | Msa0783860:CDS | 40.0% | |
| AGGACTGAAAAATCGGAGTT+TGG | + | chr5_2:68176024-68176043 | Msa0783860:CDS | 40.0% | |
| !! | AATTTTGGCCCCTCTAGAAA+TGG | + | chr5_2:68176401-68176420 | Msa0783860:intron | 40.0% |
| ! | GTTTGGTTCCATTTCTAGAG+GGG | - | chr5_2:68176412-68176431 | None:intergenic | 40.0% |
| ATTCTATCAGGTGATGCAGA+AGG | + | chr5_2:68176583-68176602 | Msa0783860:intron | 40.0% | |
| !! | AGAGTGTTTTTGCAGGTTCA+AGG | + | chr5_2:68176695-68176714 | Msa0783860:CDS | 40.0% |
| !! | GAGTGTTTTTGCAGGTTCAA+GGG | + | chr5_2:68176696-68176715 | Msa0783860:CDS | 40.0% |
| ! | AAAGTGGAAGGGATTTGCTT+AGG | + | chr5_2:68176846-68176865 | Msa0783860:CDS | 40.0% |
| TCTGTTAGTAATGATTGGGG+AGG | + | chr5_2:68176890-68176909 | Msa0783860:CDS | 40.0% | |
| ! | GGAGAAGAAGGATAAGTTGA+TGG | + | chr5_2:68176949-68176968 | Msa0783860:CDS | 40.0% |
| ACTTAGCAATGTTTCTCAGC+AGG | + | chr5_2:68176985-68177004 | Msa0783860:CDS | 40.0% | |
| ACTTCCTAACATGCACTAAG+AGG | - | chr5_2:68177128-68177147 | None:intergenic | 40.0% | |
| ATTTCCAAACCCACACTAAG+AGG | - | chr5_2:68177319-68177338 | None:intergenic | 40.0% | |
| ACTGCAATGTGACCATACTT+GGG | + | chr5_2:68177444-68177463 | Msa0783860:intron | 40.0% | |
| CTAGACGAAAGAGAAAAGGT+TGG | - | chr5_2:68177561-68177580 | None:intergenic | 40.0% | |
| CAGTTCCACGTGACAAAAAA+TGG | - | chr5_2:68177702-68177721 | None:intergenic | 40.0% | |
| ! | CATCTGCATTTACTTGTTGC+AGG | + | chr5_2:68177788-68177807 | Msa0783860:intron | 40.0% |
| GTCTTGCTGAAACTTGACAA+GGG | - | chr5_2:68177820-68177839 | None:intergenic | 40.0% | |
| TGTCTTGCTGAAACTTGACA+AGG | - | chr5_2:68177821-68177840 | None:intergenic | 40.0% | |
| TGTCAAGTTTCAGCAAGACA+TGG | + | chr5_2:68177821-68177840 | Msa0783860:CDS | 40.0% | |
| GTCAAGTTTCAGCAAGACAT+GGG | + | chr5_2:68177822-68177841 | Msa0783860:CDS | 40.0% | |
| CAAGACATGGGTGAAACAAT+GGG | + | chr5_2:68177834-68177853 | Msa0783860:CDS | 40.0% | |
| GATAAACTCCACGAATACCT+TGG | + | chr5_2:68178169-68178188 | Msa0783860:CDS | 40.0% | |
| !! | GTCAGCAAAAGCATTGTTGA+TGG | - | chr5_2:68178206-68178225 | None:intergenic | 40.0% |
| CTGTCAACAATGCACTTGAT+CGG | - | chr5_2:68178228-68178247 | None:intergenic | 40.0% | |
| GCTTCATCCAGAATATTTGG+TGG | + | chr5_2:68178307-68178326 | Msa0783860:CDS | 40.0% | |
| CTTGTCTCCACCAAATATTC+TGG | - | chr5_2:68178317-68178336 | None:intergenic | 40.0% | |
| ! | TATTTGGTGGAGACAAGTCT+AGG | + | chr5_2:68178320-68178339 | Msa0783860:CDS | 40.0% |
| AGCACTCTCAGTTACTCTAA+CGG | - | chr5_2:68178374-68178393 | None:intergenic | 40.0% | |
| ! | AAGGGGAAGCACAAATTTAC+AGG | - | chr5_2:68178507-68178526 | None:intergenic | 40.0% |
| ! | TTAGTGTCATTCAAACACCC+TGG | + | chr5_2:68178817-68178836 | Msa0783860:intron | 40.0% |
| CACCCTGGTATAAATTTGAC+TGG | + | chr5_2:68178832-68178851 | Msa0783860:intron | 40.0% | |
| TGTTCCATTGAGAGCTTCAT+TGG | + | chr5_2:68179198-68179217 | Msa0783860:intron | 40.0% | |
| ACTAATCCAATCAGGGTTGA+TGG | + | chr5_2:68179361-68179380 | Msa0783860:intron | 40.0% | |
| ACCATACATGAGATAGTGAG+TGG | + | chr5_2:68179513-68179532 | Msa0783860:intron | 40.0% | |
| TCCACTCACTATCTCATGTA+TGG | - | chr5_2:68179517-68179536 | None:intergenic | 40.0% | |
| ATGGATATGAGATGGTCAGA+TGG | - | chr5_2:68179585-68179604 | None:intergenic | 40.0% | |
| ATCTGACCATCTCATATCCA+TGG | + | chr5_2:68179584-68179603 | Msa0783860:intron | 40.0% | |
| TCAAGTCTATAGGAGTCTAC+TGG | - | chr5_2:68179704-68179723 | None:intergenic | 40.0% | |
| ! | TCGTTTGCTGCCTTTATAGA+TGG | - | chr5_2:68179861-68179880 | None:intergenic | 40.0% |
| ! | CTTCATTTTGTTGGGAGCTA+TGG | - | chr5_2:68179905-68179924 | None:intergenic | 40.0% |
| CATTTGATTCATCAGCTGGA+TGG | - | chr5_2:68180000-68180019 | None:intergenic | 40.0% | |
| CATCCAGCTGATGAATCAAA+TGG | + | chr5_2:68179998-68180017 | Msa0783860:intron | 40.0% | |
| ! | TTGCCATTTGATTCATCAGC+TGG | - | chr5_2:68180004-68180023 | None:intergenic | 40.0% |
| CAACTTCAAATTGTGATGCC+AGG | + | chr5_2:68180174-68180193 | Msa0783860:intron | 40.0% | |
| TTCAAATTGTGATGCCAGGT+TGG | + | chr5_2:68180178-68180197 | Msa0783860:intron | 40.0% | |
| CAAAAAGGACTTCAGTGCAT+TGG | - | chr5_2:68180304-68180323 | Msa0783870:intron | 40.0% | |
| ACTTTCAAAACATGCTGCGA+GGG | + | chr5_2:68180419-68180438 | Msa0783860:CDS | 40.0% | |
| CTTCAGGCTGTTATGTTACT+TGG | + | chr5_2:68180482-68180501 | Msa0783860:intron | 40.0% | |
| ! | CTCTACATCACGTGTTTTAC+AGG | + | chr5_2:68180537-68180556 | Msa0783860:intron | 40.0% |
| GATGTAATAAACCGATGAGG+CGG | + | chr5_2:68180970-68180989 | Msa0783860:three_prime_UTR | 40.0% | |
| TCGGAAACGGGAAAGTTGTT+TGG | - | chr5_2:68175530-68175549 | None:intergenic | 45.0% | |
| ATTGCTTCAGCGTAAGAAGG+AGG | - | chr5_2:68175820-68175839 | None:intergenic | 45.0% | |
| !! | CGGCTTGATTCGAGTTTTCT+AGG | - | chr5_2:68175879-68175898 | None:intergenic | 45.0% |
| TTCGGTTTCTGATCCTCAAG+AGG | + | chr5_2:68175936-68175955 | Msa0783860:CDS | 45.0% | |
| !! | AATCGGAGTTTGGTGTAAGG+AGG | + | chr5_2:68176034-68176053 | Msa0783860:CDS | 45.0% |
| TTGGTGTAAGGAGGAGGTTT+CGG | + | chr5_2:68176043-68176062 | Msa0783860:CDS | 45.0% | |
| ! | CTCTCTACCGAACTTTTCTC+CGG | - | chr5_2:68176132-68176151 | None:intergenic | 45.0% |
| GAAAAGTTCGGTAGAGAGGA+AGG | + | chr5_2:68176134-68176153 | Msa0783860:CDS | 45.0% | |
| GGTAGAGAGGAAGGTAATGT+TGG | + | chr5_2:68176143-68176162 | Msa0783860:intron | 45.0% | |
| !! | TAGCGTTGGAGAAGTATCTG+AGG | + | chr5_2:68176630-68176649 | Msa0783860:CDS | 45.0% |
| TTAGGGTTGCATCCTGTGAT+TGG | + | chr5_2:68176656-68176675 | Msa0783860:CDS | 45.0% | |
| TAGGGTTGCATCCTGTGATT+GGG | + | chr5_2:68176657-68176676 | Msa0783860:CDS | 45.0% | |
| !!! | GGAGTTGAGAGTGTTTTTGC+AGG | + | chr5_2:68176688-68176707 | Msa0783860:CDS | 45.0% |
| TTTGAATGATGTGGCTCAGC+CGG | + | chr5_2:68176820-68176839 | Msa0783860:CDS | 45.0% | |
| !! | AAATCCCTTCCACTTTTCGC+CGG | - | chr5_2:68176842-68176861 | None:intergenic | 45.0% |
| CATGCACTAAGAGGACACAA+GGG | - | chr5_2:68177119-68177138 | None:intergenic | 45.0% | |
| ACATGCACTAAGAGGACACA+AGG | - | chr5_2:68177120-68177139 | None:intergenic | 45.0% | |
| GTGTCCTCTTAGTGCATGTT+AGG | + | chr5_2:68177121-68177140 | Msa0783860:intron | 45.0% | |
| GACTGCAATGTGACCATACT+TGG | + | chr5_2:68177443-68177462 | Msa0783860:intron | 45.0% | |
| GCAAGACATGGGTGAAACAA+TGG | + | chr5_2:68177833-68177852 | Msa0783860:CDS | 45.0% | |
| GTGAAACAATGGGTGAGCTA+GGG | + | chr5_2:68177844-68177863 | Msa0783860:CDS | 45.0% | |
| ! | GATAGTGAGTGGAGTATCCA+AGG | + | chr5_2:68179524-68179543 | Msa0783860:intron | 45.0% |
| TTGCAGCCATGGATATGAGA+TGG | - | chr5_2:68179593-68179612 | None:intergenic | 45.0% | |
| ! | AACTCGAGATTTTGCAGCCA+TGG | - | chr5_2:68179604-68179623 | None:intergenic | 45.0% |
| TCGAGTTAACTCAGAATCGC+AGG | + | chr5_2:68179617-68179636 | Msa0783860:intron | 45.0% | |
| TCGCAGGAGTTTATCACTCT+AGG | + | chr5_2:68179633-68179652 | Msa0783860:intron | 45.0% | |
| ATAGAATGCGAGTTTGGGGA+CGG | + | chr5_2:68179724-68179743 | Msa0783860:intron | 45.0% | |
| CATAACCATGGTTGCAAGTC+TGG | + | chr5_2:68179948-68179967 | Msa0783860:intron | 45.0% | |
| TCTTTCCAGACTTGCAACCA+TGG | - | chr5_2:68179956-68179975 | None:intergenic | 45.0% | |
| CATCAGCTGGATGGTCTATT+GGG | - | chr5_2:68179991-68180010 | None:intergenic | 45.0% | |
| TCATCAGCTGGATGGTCTAT+TGG | - | chr5_2:68179992-68180011 | None:intergenic | 45.0% | |
| !! | AGGGTGAAATGTGGTGGATT+GGG | - | chr5_2:68180036-68180055 | None:intergenic | 45.0% |
| !! | AAGGGTGAAATGTGGTGGAT+TGG | - | chr5_2:68180037-68180056 | None:intergenic | 45.0% |
| ATCCACCACATTTCACCCTT+TGG | + | chr5_2:68180037-68180056 | Msa0783860:intron | 45.0% | |
| AAAGGCCAAAGGGTGAAATG+TGG | - | chr5_2:68180045-68180064 | None:intergenic | 45.0% | |
| AAAGAGAACTACACCACCCT+AGG | - | chr5_2:68180204-68180223 | Msa0783870:CDS | 45.0% | |
| GACTTTCAAAACATGCTGCG+AGG | + | chr5_2:68180418-68180437 | Msa0783860:CDS | 45.0% | |
| ! | ACATCACGTGTTTTACAGGC+AGG | + | chr5_2:68180541-68180560 | Msa0783860:intron | 45.0% |
| GACAGCAGCTAGAATGTACT+TGG | + | chr5_2:68180628-68180647 | Msa0783860:exon | 45.0% | |
| AAGCGCGAAGAACGTGATCT+TGG | - | chr5_2:68175672-68175691 | None:intergenic | 50.0% | |
| CGCTTCCCAAGACGATGAAA+TGG | + | chr5_2:68175687-68175706 | Msa0783860:CDS | 50.0% | |
| AACGTTGCCGGAGGAGTTAT+CGG | - | chr5_2:68175749-68175768 | None:intergenic | 50.0% | |
| ! | GGTGATTTAGGACTTTGCGG+TGG | - | chr5_2:68175778-68175797 | None:intergenic | 50.0% |
| TAGGGTTTGATCGTGACCGT+TGG | - | chr5_2:68175860-68175879 | None:intergenic | 50.0% | |
| AACTCGAATCAAGCCGGATC+CGG | + | chr5_2:68175883-68175902 | Msa0783860:CDS | 50.0% | |
| TGATCCTCAAGAGGAGCAAG+AGG | + | chr5_2:68175945-68175964 | Msa0783860:CDS | 50.0% | |
| GTTACCTCTTGCTCCTCTTG+AGG | - | chr5_2:68175952-68175971 | None:intergenic | 50.0% | |
| GTAACGAACTCGCTTGTTCC+AGG | + | chr5_2:68175967-68175986 | Msa0783860:CDS | 50.0% | |
| TGGTGTAAGGAGGAGGTTTC+GGG | + | chr5_2:68176044-68176063 | Msa0783860:CDS | 50.0% | |
| TACGTTGTCGGAGCGGTTAT+CGG | + | chr5_2:68176074-68176093 | Msa0783860:CDS | 50.0% | |
| CGGTTATCGGAGGTTTATCG+TGG | + | chr5_2:68176087-68176106 | Msa0783860:CDS | 50.0% | |
| GTGGTTATGTGATTCCGGTG+AGG | + | chr5_2:68176106-68176125 | Msa0783860:CDS | 50.0% | |
| TTATGTGATTCCGGTGAGGC+CGG | + | chr5_2:68176110-68176129 | Msa0783860:CDS | 50.0% | |
| CGGAGAAAAGTTCGGTAGAG+AGG | + | chr5_2:68176130-68176149 | Msa0783860:CDS | 50.0% | |
| CTATCAGGTGATGCAGAAGG+AGG | + | chr5_2:68176586-68176605 | Msa0783860:intron | 50.0% | |
| GATGCAGAAGGAGGAGTTTG+TGG | + | chr5_2:68176595-68176614 | Msa0783860:CDS | 50.0% | |
| TCCTGTGATTGGGAAGAGTG+AGG | + | chr5_2:68176667-68176686 | Msa0783860:CDS | 50.0% | |
| TCCTCACTCTTCCCAATCAC+AGG | - | chr5_2:68176671-68176690 | None:intergenic | 50.0% | |
| AAGGGAAGTTGCCGTTGATG+AGG | + | chr5_2:68176714-68176733 | Msa0783860:CDS | 50.0% | |
| ACATCCGTCGTCCTCATCAA+CGG | - | chr5_2:68176728-68176747 | None:intergenic | 50.0% | |
| TGGCGTCAAGGATGCTTGAT+GGG | + | chr5_2:68176747-68176766 | Msa0783860:CDS | 50.0% | |
| CCCACACTAAGAGGACACAA+GGG | - | chr5_2:68177310-68177329 | None:intergenic | 50.0% | |
| CCCTTGTGTCCTCTTAGTGT+GGG | + | chr5_2:68177307-68177326 | Msa0783860:intron | 50.0% | |
| ACCCACACTAAGAGGACACA+AGG | - | chr5_2:68177311-68177330 | None:intergenic | 50.0% | |
| GTGTCCTCTTAGTGTGGGTT+TGG | + | chr5_2:68177312-68177331 | Msa0783860:intron | 50.0% | |
| GTATGGTCACATTGCAGTCG+CGG | - | chr5_2:68177442-68177461 | None:intergenic | 50.0% | |
| GGTGAAACAATGGGTGAGCT+AGG | + | chr5_2:68177843-68177862 | Msa0783860:CDS | 50.0% | |
| AACAATGGGTGAGCTAGGGT+TGG | + | chr5_2:68177848-68177867 | Msa0783860:CDS | 50.0% | |
| ! | GCATTGTCCCAAGGTATTCG+TGG | - | chr5_2:68178180-68178199 | None:intergenic | 50.0% |
| TGATGGCTAGCATTGTCCCA+AGG | - | chr5_2:68178189-68178208 | None:intergenic | 50.0% | |
| ! | GTGGAGACAAGTCTAGGATG+CGG | + | chr5_2:68178326-68178345 | Msa0783860:CDS | 50.0% |
| GCGTCCAATGAAGCTCTCAA+TGG | - | chr5_2:68179205-68179224 | None:intergenic | 50.0% | |
| CTTGCACCATCAACCCTGAT+TGG | - | chr5_2:68179370-68179389 | None:intergenic | 50.0% | |
| !! | GCGAGGGTTTGTTGTCAATC+AGG | + | chr5_2:68180435-68180454 | Msa0783860:CDS | 50.0% |
| AGAGAAGATGGCTGCTGTGT+GGG | + | chr5_2:68180570-68180589 | Msa0783860:CDS | 50.0% | |
| !! | AAAGGAGTGGCTTGCTGTGA+TGG | - | chr5_2:68180889-68180908 | Msa0783870:intron | 50.0% |
| TGGTTGTTGAACGTTGCCGG+AGG | - | chr5_2:68175758-68175777 | None:intergenic | 55.0% | |
| CGGTGGTTGTTGAACGTTGC+CGG | - | chr5_2:68175761-68175780 | None:intergenic | 55.0% | |
| CAGCGTAAGAAGGAGGATCG+AGG | - | chr5_2:68175813-68175832 | None:intergenic | 55.0% | |
| GAATCAAGCCGGATCCGGAT+CGG | + | chr5_2:68175888-68175907 | Msa0783860:CDS | 55.0% | |
| AATCAAGCCGGATCCGGATC+GGG | + | chr5_2:68175889-68175908 | Msa0783860:CDS | 55.0% | |
| ! | ATCGGATTCGGTTCCCGATC+CGG | - | chr5_2:68175905-68175924 | None:intergenic | 55.0% |
| ACGAACTCGCTTGTTCCAGG+TGG | + | chr5_2:68175970-68175989 | Msa0783860:CDS | 55.0% | |
| !! | CGGAGTTTGGTGTAAGGAGG+AGG | + | chr5_2:68176037-68176056 | Msa0783860:CDS | 55.0% |
| TGTAAGGAGGAGGTTTCGGG+AGG | + | chr5_2:68176047-68176066 | Msa0783860:CDS | 55.0% | |
| TCGGGAGGTGGTTACGTTGT+CGG | + | chr5_2:68176062-68176081 | Msa0783860:CDS | 55.0% | |
| AGGTGGTTACGTTGTCGGAG+CGG | + | chr5_2:68176067-68176086 | Msa0783860:CDS | 55.0% | |
| ! | GAACTTTTCTCCGGCCTCAC+CGG | - | chr5_2:68176123-68176142 | None:intergenic | 55.0% |
| GGTGAGGCCGGAGAAAAGTT+CGG | + | chr5_2:68176122-68176141 | Msa0783860:CDS | 55.0% | |
| AGGAGGAGTTTGTGGAGCAG+AGG | + | chr5_2:68176603-68176622 | Msa0783860:CDS | 55.0% | |
| GGAGCAGAGGAGATTAGCGT+TGG | + | chr5_2:68176616-68176635 | Msa0783860:CDS | 55.0% | |
| ! | GTTGCCGTTGATGAGGACGA+CGG | + | chr5_2:68176721-68176740 | Msa0783860:CDS | 55.0% |
| ! | GTTGATGAGGACGACGGATG+TGG | + | chr5_2:68176727-68176746 | Msa0783860:CDS | 55.0% |
| GTGGCGTCAAGGATGCTTGA+TGG | + | chr5_2:68176746-68176765 | Msa0783860:CDS | 55.0% | |
| GGCGTCAAGGATGCTTGATG+GGG | + | chr5_2:68176748-68176767 | Msa0783860:CDS | 55.0% | |
| GTCAAGGATGCTTGATGGGG+CGG | + | chr5_2:68176751-68176770 | Msa0783860:CDS | 55.0% | |
| TCAGCCGGCGAAAAGTGGAA+GGG | + | chr5_2:68176835-68176854 | Msa0783860:CDS | 55.0% | |
| !! | TTGGGGAGGTGCTAAGCCAT+TGG | + | chr5_2:68176904-68176923 | Msa0783860:CDS | 55.0% |
| GCCCTTGTGTCCTCTTAGTG+TGG | + | chr5_2:68177115-68177134 | Msa0783860:intron | 55.0% | |
| CTGCAGCTGTCAAAGCAAGC+AGG | + | chr5_2:68177958-68177977 | Msa0783860:CDS | 55.0% | |
| GGCCAAAGGGTGAAATGTGG+TGG | - | chr5_2:68180042-68180061 | None:intergenic | 55.0% | |
| !! | TTGTGATGCCAGGTTGGCCT+AGG | + | chr5_2:68180184-68180203 | Msa0783860:intron | 55.0% |
| !! | TGTGATGCCAGGTTGGCCTA+GGG | + | chr5_2:68180185-68180204 | Msa0783860:intron | 55.0% |
| GGCAGGCTATGCAGAGAAGA+TGG | + | chr5_2:68180558-68180577 | Msa0783860:intron | 55.0% | |
| CAGAGAAGATGGCTGCTGTG+TGG | + | chr5_2:68180569-68180588 | Msa0783860:CDS | 55.0% | |
| CTCCACGACGACACCGACAA+CGG | + | chr5_2:68175721-68175740 | Msa0783860:CDS | 60.0% | |
| GGAGTTATCGGCGCCGTTGT+CGG | - | chr5_2:68175737-68175756 | None:intergenic | 60.0% | |
| !! | AACGGCGCCGATAACTCCTC+CGG | + | chr5_2:68175739-68175758 | Msa0783860:CDS | 60.0% |
| TTCGGTTCCCGATCCGGATC+CGG | - | chr5_2:68175899-68175918 | None:intergenic | 60.0% | |
| AAGGAGGAGGTTTCGGGAGG+TGG | + | chr5_2:68176050-68176069 | Msa0783860:CDS | 60.0% | |
| GTTGTCGGAGCGGTTATCGG+AGG | + | chr5_2:68176077-68176096 | Msa0783860:CDS | 60.0% | |
| ! | AGCTGTTTGGGGCGGAGAGT+GGG | + | chr5_2:68176789-68176808 | Msa0783860:CDS | 60.0% |
| CTCAGCCGGCGAAAAGTGGA+AGG | + | chr5_2:68176834-68176853 | Msa0783860:CDS | 60.0% | |
| TACACCACCCTAGGCCAACC+TGG | - | chr5_2:68180195-68180214 | Msa0783870:CDS | 60.0% | |
| !! | CGTTGTCGGTGTCGTCGTGG+AGG | - | chr5_2:68175723-68175742 | None:intergenic | 65.0% |
| GGACGACGGATGTGGCGTCA+AGG | + | chr5_2:68176735-68176754 | Msa0783860:CDS | 65.0% | |
| GGATGCTTGATGGGGCGGTG+AGG | + | chr5_2:68176756-68176775 | Msa0783860:CDS | 65.0% | |
| AGGCTGCCACGGCAGCTGTT+TGG | + | chr5_2:68176776-68176795 | Msa0783860:CDS | 65.0% | |
| GGCTGCCACGGCAGCTGTTT+GGG | + | chr5_2:68176777-68176796 | Msa0783860:CDS | 65.0% | |
| GCTGCCACGGCAGCTGTTTG+GGG | + | chr5_2:68176778-68176797 | Msa0783860:CDS | 65.0% | |
| ! | CAGCTGTTTGGGGCGGAGAG+TGG | + | chr5_2:68176788-68176807 | Msa0783860:CDS | 65.0% |
| ! | GCTGTTTGGGGCGGAGAGTG+GGG | + | chr5_2:68176790-68176809 | Msa0783860:CDS | 65.0% |
| GTGGCTCAGCCGGCGAAAAG+TGG | + | chr5_2:68176830-68176849 | Msa0783860:CDS | 65.0% | |
| !! | GATGCCAGGTTGGCCTAGGG+TGG | + | chr5_2:68180188-68180207 | Msa0783860:intron | 65.0% |
| !! | CGCCGTTGTCGGTGTCGTCG+TGG | - | chr5_2:68175726-68175745 | None:intergenic | 70.0% |
| ATGGGGCGGTGAGGCTGCCA+CGG | + | chr5_2:68176765-68176784 | Msa0783860:CDS | 70.0% | |
| GCCACGGCAGCTGTTTGGGG+CGG | + | chr5_2:68176781-68176800 | Msa0783860:CDS | 70.0% | |
| TCCGCCCCAAACAGCTGCCG+TGG | - | chr5_2:68176785-68176804 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 68175394 | 68180993 | 68175394 | ID=Msa0783860;Name=Msa0783860 |
| chr5_2 | mRNA | 68175394 | 68180993 | 68175394 | ID=Msa0783860-mRNA-1;Parent=Msa0783860;Name=Msa0783860-mRNA-1;_AED=0.12;_eAED=0.12;_QI=267|1|1|1|1|1|6|354|515 |
| chr5_2 | exon | 68175394 | 68176155 | 68175394 | ID=Msa0783860-mRNA-1:exon:20400;Parent=Msa0783860-mRNA-1 |
| chr5_2 | exon | 68176593 | 68177006 | 68176593 | ID=Msa0783860-mRNA-1:exon:20401;Parent=Msa0783860-mRNA-1 |
| chr5_2 | exon | 68177810 | 68178019 | 68177810 | ID=Msa0783860-mRNA-1:exon:20402;Parent=Msa0783860-mRNA-1 |
| chr5_2 | exon | 68178169 | 68178429 | 68178169 | ID=Msa0783860-mRNA-1:exon:20403;Parent=Msa0783860-mRNA-1 |
| chr5_2 | exon | 68180370 | 68180456 | 68180370 | ID=Msa0783860-mRNA-1:exon:20404;Parent=Msa0783860-mRNA-1 |
| chr5_2 | exon | 68180559 | 68180993 | 68180559 | ID=Msa0783860-mRNA-1:exon:20405;Parent=Msa0783860-mRNA-1 |
| chr5_2 | five_prime_UTR | 68175394 | 68175660 | 68175394 | ID=Msa0783860-mRNA-1:five_prime_utr;Parent=Msa0783860-mRNA-1 |
| chr5_2 | CDS | 68175661 | 68176155 | 68175661 | ID=Msa0783860-mRNA-1:cds;Parent=Msa0783860-mRNA-1 |
| chr5_2 | CDS | 68176593 | 68177006 | 68176593 | ID=Msa0783860-mRNA-1:cds;Parent=Msa0783860-mRNA-1 |
| chr5_2 | CDS | 68177810 | 68178019 | 68177810 | ID=Msa0783860-mRNA-1:cds;Parent=Msa0783860-mRNA-1 |
| chr5_2 | CDS | 68178169 | 68178429 | 68178169 | ID=Msa0783860-mRNA-1:cds;Parent=Msa0783860-mRNA-1 |
| chr5_2 | CDS | 68180370 | 68180456 | 68180370 | ID=Msa0783860-mRNA-1:cds;Parent=Msa0783860-mRNA-1 |
| chr5_2 | CDS | 68180559 | 68180639 | 68180559 | ID=Msa0783860-mRNA-1:cds;Parent=Msa0783860-mRNA-1 |
| chr5_2 | three_prime_UTR | 68180640 | 68180993 | 68180640 | ID=Msa0783860-mRNA-1:three_prime_utr;Parent=Msa0783860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
