Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0028930 | AAF19528.1 | 98.124 | 533 | 10 | 0 | 12 | 544 | 1 | 533 | 0.0 | 1053 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0028930 | sp|Q9LE82|RAGP1_ARATH | 69.109 | 505 | 149 | 3 | 12 | 515 | 1 | 499 | 0.0 | 705 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0028930 | Q9SBS1 | 98.124 | 533 | 10 | 0 | 12 | 544 | 1 | 533 | 0.0 | 1053 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002560 | Msa0028930 | 0.817240 | 3.653560e-52 | -8.615850e-47 |
| Msa0007850 | Msa0028930 | 0.811545 | 6.636235e-51 | -8.615850e-47 |
| Msa0008200 | Msa0028930 | 0.812362 | 4.403990e-51 | -8.615850e-47 |
| Msa0017390 | Msa0028930 | 0.845258 | 4.543012e-59 | -8.615850e-47 |
| Msa0020390 | Msa0028930 | 0.811274 | 7.599834e-51 | -8.615850e-47 |
| Msa0020410 | Msa0028930 | 0.806162 | 9.404388e-50 | -8.615850e-47 |
| Msa0024710 | Msa0028930 | 0.804482 | 2.115115e-49 | -8.615850e-47 |
| Msa0028930 | Msa0033880 | 0.812626 | 3.857574e-51 | -8.615850e-47 |
| Msa0028930 | Msa0037160 | 0.826923 | 2.077898e-54 | -8.615850e-47 |
| Msa0028930 | Msa0041690 | 0.823466 | 1.364597e-53 | -8.615850e-47 |
| Msa0028930 | Msa0042280 | 0.800750 | 1.244757e-48 | -8.615850e-47 |
| Msa0028930 | Msa0047160 | 0.805376 | 1.375215e-49 | -8.615850e-47 |
| Msa0028930 | Msa0048180 | 0.808046 | 3.753678e-50 | -8.615850e-47 |
| Msa0028930 | Msa0054820 | 0.816037 | 6.796436e-52 | -8.615850e-47 |
| Msa0028930 | Msa0065550 | 0.832895 | 7.279455e-56 | -8.615850e-47 |
| Msa0028930 | Msa0072720 | 0.816215 | 6.203061e-52 | -8.615850e-47 |
| Msa0028930 | Msa0078480 | 0.801976 | 6.984342e-49 | -8.615850e-47 |
| Msa0028930 | Msa0079110 | 0.837155 | 6.142269e-57 | -8.615850e-47 |
| Msa0028930 | Msa0081210 | 0.808499 | 3.004909e-50 | -8.615850e-47 |
| Msa0028930 | Msa0081650 | 0.825281 | 5.107332e-54 | -8.615850e-47 |
| Msa0028930 | Msa0090520 | 0.804479 | 2.117925e-49 | -8.615850e-47 |
| Msa0028930 | Msa0093850 | 0.803901 | 2.793726e-49 | -8.615850e-47 |
| Msa0028930 | Msa0097590 | 0.808930 | 2.430980e-50 | -8.615850e-47 |
| Msa0028930 | Msa0097610 | 0.805644 | 1.208456e-49 | -8.615850e-47 |
| Msa0028930 | Msa0100160 | 0.808021 | 3.800307e-50 | -8.615850e-47 |
| Msa0028930 | Msa0103250 | 0.835257 | 1.863848e-56 | -8.615850e-47 |
| Msa0028930 | Msa0106620 | 0.856776 | 2.559583e-62 | -8.615850e-47 |
| Msa0028930 | Msa0106710 | 0.860557 | 1.901413e-63 | -8.615850e-47 |
| Msa0028930 | Msa0124450 | 0.948564 | 7.350314e-107 | -8.615850e-47 |
| Msa0028930 | Msa0127100 | 0.944578 | 1.508151e-103 | -8.615850e-47 |
| Msa0028930 | Msa0127850 | 0.804020 | 2.639823e-49 | -8.615850e-47 |
| Msa0028930 | Msa0136120 | 0.814643 | 1.387679e-51 | -8.615850e-47 |
| Msa0028930 | Msa0137990 | 0.801080 | 1.065939e-48 | -8.615850e-47 |
| Msa0028930 | Msa0138640 | 0.806718 | 7.178094e-50 | -8.615850e-47 |
| Msa0028930 | Msa0138750 | 0.804926 | 1.708132e-49 | -8.615850e-47 |
| Msa0028930 | Msa0139670 | 0.804275 | 2.335461e-49 | -8.615850e-47 |
| Msa0028930 | Msa0142500 | 0.803152 | 3.995215e-49 | -8.615850e-47 |
| Msa0028930 | Msa0149440 | 0.802433 | 5.624036e-49 | -8.615850e-47 |
| Msa0028930 | Msa0168870 | 0.804838 | 1.782154e-49 | -8.615850e-47 |
| Msa0028930 | Msa0183850 | 0.800671 | 1.292032e-48 | -8.615850e-47 |
| Msa0028930 | Msa0183900 | 0.800018 | 1.754509e-48 | -8.615850e-47 |
| Msa0028930 | Msa0188350 | 0.818395 | 2.004208e-52 | -8.615850e-47 |
| Msa0028930 | Msa0189040 | 0.808359 | 3.220378e-50 | -8.615850e-47 |
| Msa0028930 | Msa0192480 | 0.812721 | 3.675962e-51 | -8.615850e-47 |
| Msa0028930 | Msa0192640 | 0.824617 | 7.323579e-54 | -8.615850e-47 |
| Msa0028930 | Msa0199940 | 0.811987 | 5.317665e-51 | -8.615850e-47 |
| Msa0028930 | Msa0202410 | 0.841734 | 3.970029e-58 | -8.615850e-47 |
| Msa0028930 | Msa0204960 | 0.813299 | 2.745544e-51 | -8.615850e-47 |
| Msa0028930 | Msa0205010 | 0.850264 | 1.899554e-60 | -8.615850e-47 |
| Msa0028930 | Msa0207350 | 0.839049 | 1.998564e-57 | -8.615850e-47 |
| Msa0028930 | Msa0214550 | 0.803796 | 2.937495e-49 | -8.615850e-47 |
| Msa0028930 | Msa0217700 | 0.819561 | 1.088736e-52 | -8.615850e-47 |
| Msa0028930 | Msa0220730 | 0.802848 | 4.616459e-49 | -8.615850e-47 |
| Msa0028930 | Msa0223080 | 0.815510 | 8.911037e-52 | -8.615850e-47 |
| Msa0028930 | Msa0223230 | 0.822242 | 2.631171e-53 | -8.615850e-47 |
| Msa0028930 | Msa0223330 | 0.812777 | 3.574707e-51 | -8.615850e-47 |
| Msa0028930 | Msa0225620 | 0.821190 | 4.606380e-53 | -8.615850e-47 |
| Msa0028930 | Msa0231100 | 0.814024 | 1.902092e-51 | -8.615850e-47 |
| Msa0028930 | Msa0231190 | 0.826058 | 3.341435e-54 | -8.615850e-47 |
| Msa0028930 | Msa0233370 | 0.817447 | 3.282650e-52 | -8.615850e-47 |
| Msa0028930 | Msa0237200 | 0.826395 | 2.777230e-54 | -8.615850e-47 |
| Msa0028930 | Msa0237210 | 0.843351 | 1.477923e-58 | -8.615850e-47 |
| Msa0028930 | Msa0238030 | 0.811822 | 5.777483e-51 | -8.615850e-47 |
| Msa0028930 | Msa0240900 | 0.824204 | 9.162822e-54 | -8.615850e-47 |
| Msa0028930 | Msa0241140 | 0.834885 | 2.313485e-56 | -8.615850e-47 |
| Msa0028930 | Msa0241830 | 0.855931 | 4.530130e-62 | -8.615850e-47 |
| Msa0028930 | Msa0244970 | 0.804056 | 2.594056e-49 | -8.615850e-47 |
| Msa0028930 | Msa0244980 | 0.818286 | 2.122345e-52 | -8.615850e-47 |
| Msa0028930 | Msa0249580 | 0.819225 | 1.298898e-52 | -8.615850e-47 |
| Msa0028930 | Msa0254940 | 0.805403 | 1.357895e-49 | -8.615850e-47 |
| Msa0028930 | Msa0256480 | 0.801507 | 8.715258e-49 | -8.615850e-47 |
| Msa0028930 | Msa0257490 | 0.810662 | 1.031079e-50 | -8.615850e-47 |
| Msa0028930 | Msa0259210 | 0.801518 | 8.669444e-49 | -8.615850e-47 |
| Msa0028930 | Msa0274970 | 0.821991 | 3.007858e-53 | -8.615850e-47 |
| Msa0028930 | Msa0274980 | 0.825371 | 4.861150e-54 | -8.615850e-47 |
| Msa0028930 | Msa0275160 | 0.808731 | 2.681116e-50 | -8.615850e-47 |
| Msa0028930 | Msa0275360 | 0.813194 | 2.895249e-51 | -8.615850e-47 |
| Msa0028930 | Msa0278570 | 0.820309 | 7.342193e-53 | -8.615850e-47 |
| Msa0028930 | Msa0279850 | 0.823427 | 1.393582e-53 | -8.615850e-47 |
| Msa0028930 | Msa0281530 | 0.814240 | 1.703788e-51 | -8.615850e-47 |
| Msa0028930 | Msa0283420 | 0.813525 | 2.449526e-51 | -8.615850e-47 |
| Msa0028930 | Msa0288080 | 0.802699 | 4.957362e-49 | -8.615850e-47 |
| Msa0028930 | Msa0295460 | -0.806636 | 7.472949e-50 | -8.615850e-47 |
| Msa0028930 | Msa0296250 | 0.821204 | 4.572631e-53 | -8.615850e-47 |
| Msa0028930 | Msa0296790 | 0.821594 | 3.715792e-53 | -8.615850e-47 |
| Msa0028930 | Msa0296820 | 0.827723 | 1.336685e-54 | -8.615850e-47 |
| Msa0028930 | Msa0302160 | 0.819695 | 1.014757e-52 | -8.615850e-47 |
| Msa0028930 | Msa0312910 | 0.810650 | 1.037096e-50 | -8.615850e-47 |
| Msa0028930 | Msa0315680 | 0.823616 | 1.258761e-53 | -8.615850e-47 |
| Msa0028930 | Msa0315690 | 0.838369 | 2.996236e-57 | -8.615850e-47 |
| Msa0028930 | Msa0317970 | 0.846854 | 1.672110e-59 | -8.615850e-47 |
| Msa0028930 | Msa0320590 | 0.807906 | 4.019796e-50 | -8.615850e-47 |
| Msa0028930 | Msa0321690 | 0.833782 | 4.376172e-56 | -8.615850e-47 |
| Msa0028930 | Msa0322240 | 0.824975 | 6.032725e-54 | -8.615850e-47 |
| Msa0028930 | Msa0322900 | 0.852282 | 5.113240e-61 | -8.615850e-47 |
| Msa0028930 | Msa0323260 | 0.805102 | 1.570034e-49 | -8.615850e-47 |
| Msa0028930 | Msa0326480 | 0.820069 | 8.333703e-53 | -8.615850e-47 |
| Msa0028930 | Msa0339490 | 0.823714 | 1.193835e-53 | -8.615850e-47 |
| Msa0028930 | Msa0341690 | 0.827024 | 1.966052e-54 | -8.615850e-47 |
| Msa0028930 | Msa0341840 | 0.801585 | 8.399865e-49 | -8.615850e-47 |
| Msa0028930 | Msa0342010 | 0.806673 | 7.336929e-50 | -8.615850e-47 |
| Msa0028930 | Msa0357900 | 0.836786 | 7.630900e-57 | -8.615850e-47 |
| Msa0028930 | Msa0363060 | 0.820463 | 6.768485e-53 | -8.615850e-47 |
| Msa0028930 | Msa0371320 | 0.808074 | 3.702993e-50 | -8.615850e-47 |
| Msa0028930 | Msa0372810 | 0.830642 | 2.617301e-55 | -8.615850e-47 |
| Msa0028930 | Msa0376020 | 0.818938 | 1.509456e-52 | -8.615850e-47 |
| Msa0028930 | Msa0377450 | 0.807696 | 4.456194e-50 | -8.615850e-47 |
| Msa0028930 | Msa0378970 | 0.840478 | 8.485974e-58 | -8.615850e-47 |
| Msa0028930 | Msa0382370 | 0.819721 | 1.000740e-52 | -8.615850e-47 |
| Msa0028930 | Msa0388990 | 0.800861 | 1.181420e-48 | -8.615850e-47 |
| Msa0028930 | Msa0389910 | 0.846912 | 1.612175e-59 | -8.615850e-47 |
| Msa0028930 | Msa0395980 | 0.814369 | 1.595990e-51 | -8.615850e-47 |
| Msa0028930 | Msa0403500 | 0.807746 | 4.347495e-50 | -8.615850e-47 |
| Msa0028930 | Msa0403770 | 0.808866 | 2.509004e-50 | -8.615850e-47 |
| Msa0028930 | Msa0405130 | 0.808169 | 3.533643e-50 | -8.615850e-47 |
| Msa0028930 | Msa0419720 | 0.851148 | 1.071404e-60 | -8.615850e-47 |
| Msa0028930 | Msa0428050 | 0.806144 | 9.486844e-50 | -8.615850e-47 |
| Msa0028930 | Msa0428580 | 0.823160 | 1.608781e-53 | -8.615850e-47 |
| Msa0028930 | Msa0432160 | 0.813166 | 2.937224e-51 | -8.615850e-47 |
| Msa0028930 | Msa0434570 | 0.802180 | 6.341193e-49 | -8.615850e-47 |
| Msa0028930 | Msa0437020 | 0.828646 | 8.008666e-55 | -8.615850e-47 |
| Msa0028930 | Msa0450400 | -0.821452 | 4.007976e-53 | -8.615850e-47 |
| Msa0028930 | Msa0450480 | 0.822801 | 1.950610e-53 | -8.615850e-47 |
| Msa0028930 | Msa0467100 | 0.830061 | 3.629793e-55 | -8.615850e-47 |
| Msa0028930 | Msa0468410 | 0.825240 | 5.222679e-54 | -8.615850e-47 |
| Msa0028930 | Msa0473330 | 0.825820 | 3.805700e-54 | -8.615850e-47 |
| Msa0028930 | Msa0474940 | 0.817578 | 3.066984e-52 | -8.615850e-47 |
| Msa0028930 | Msa0476680 | 0.821828 | 3.280022e-53 | -8.615850e-47 |
| Msa0028930 | Msa0480780 | 0.837352 | 5.466772e-57 | -8.615850e-47 |
| Msa0028930 | Msa0481970 | 0.818280 | 2.128424e-52 | -8.615850e-47 |
| Msa0028930 | Msa0485240 | 0.809171 | 2.158978e-50 | -8.615850e-47 |
| Msa0028930 | Msa0491000 | 0.823150 | 1.617515e-53 | -8.615850e-47 |
| Msa0028930 | Msa0510930 | 0.815345 | 9.695630e-52 | -8.615850e-47 |
| Msa0028930 | Msa0511770 | 0.827333 | 1.657554e-54 | -8.615850e-47 |
| Msa0028930 | Msa0513260 | 0.812026 | 5.213646e-51 | -8.615850e-47 |
| Msa0028930 | Msa0516020 | 0.818953 | 1.497562e-52 | -8.615850e-47 |
| Msa0028930 | Msa0517640 | 0.832764 | 7.846745e-56 | -8.615850e-47 |
| Msa0028930 | Msa0518030 | 0.828719 | 7.689536e-55 | -8.615850e-47 |
| Msa0028930 | Msa0521010 | 0.821031 | 5.010962e-53 | -8.615850e-47 |
| Msa0028930 | Msa0521670 | 0.807367 | 5.232101e-50 | -8.615850e-47 |
| Msa0028930 | Msa0523050 | 0.813712 | 2.227348e-51 | -8.615850e-47 |
| Msa0028930 | Msa0531250 | 0.843365 | 1.465394e-58 | -8.615850e-47 |
| Msa0028930 | Msa0531650 | 0.800904 | 1.158015e-48 | -8.615850e-47 |
| Msa0028930 | Msa0532960 | 0.814672 | 1.367584e-51 | -8.615850e-47 |
| Msa0028930 | Msa0547990 | 0.833010 | 6.817178e-56 | -8.615850e-47 |
| Msa0028930 | Msa0554290 | 0.835712 | 1.430141e-56 | -8.615850e-47 |
| Msa0028930 | Msa0560500 | 0.827012 | 1.978363e-54 | -8.615850e-47 |
| Msa0028930 | Msa0576680 | 0.804088 | 2.555231e-49 | -8.615850e-47 |
| Msa0028930 | Msa0581280 | 0.833573 | 4.935915e-56 | -8.615850e-47 |
| Msa0028930 | Msa0583500 | 0.804688 | 1.915331e-49 | -8.615850e-47 |
| Msa0028930 | Msa0588090 | 0.846356 | 2.286248e-59 | -8.615850e-47 |
| Msa0028930 | Msa0592270 | 0.802026 | 6.818166e-49 | -8.615850e-47 |
| Msa0028930 | Msa0593700 | 0.818186 | 2.235293e-52 | -8.615850e-47 |
| Msa0028930 | Msa0617170 | 0.807093 | 5.982667e-50 | -8.615850e-47 |
| Msa0028930 | Msa0624060 | 0.801585 | 8.399865e-49 | -8.615850e-47 |
| Msa0028930 | Msa0624470 | 0.800952 | 1.132237e-48 | -8.615850e-47 |
| Msa0028930 | Msa0628420 | 0.840028 | 1.112929e-57 | -8.615850e-47 |
| Msa0028930 | Msa0629240 | 0.800044 | 1.733311e-48 | -8.615850e-47 |
| Msa0028930 | Msa0644030 | 0.821220 | 4.533061e-53 | -8.615850e-47 |
| Msa0028930 | Msa0647430 | 0.816082 | 6.644109e-52 | -8.615850e-47 |
| Msa0028930 | Msa0652690 | 0.833361 | 5.573245e-56 | -8.615850e-47 |
| Msa0028930 | Msa0658590 | 0.817977 | 2.492004e-52 | -8.615850e-47 |
| Msa0028930 | Msa0666230 | 0.810715 | 1.004279e-50 | -8.615850e-47 |
| Msa0028930 | Msa0672100 | 0.801054 | 1.079167e-48 | -8.615850e-47 |
| Msa0028930 | Msa0672550 | 0.833475 | 5.222036e-56 | -8.615850e-47 |
| Msa0028930 | Msa0689440 | 0.808394 | 3.165085e-50 | -8.615850e-47 |
| Msa0028930 | Msa0691290 | 0.803151 | 3.997614e-49 | -8.615850e-47 |
| Msa0028930 | Msa0703440 | 0.800877 | 1.172508e-48 | -8.615850e-47 |
| Msa0028930 | Msa0705990 | 0.806980 | 6.320826e-50 | -8.615850e-47 |
| Msa0028930 | Msa0709120 | 0.802224 | 6.210124e-49 | -8.615850e-47 |
| Msa0028930 | Msa0712560 | 0.832682 | 8.221658e-56 | -8.615850e-47 |
| Msa0028930 | Msa0721280 | 0.812503 | 4.102729e-51 | -8.615850e-47 |
| Msa0028930 | Msa0738100 | 0.817678 | 2.910670e-52 | -8.615850e-47 |
| Msa0028930 | Msa0748920 | 0.824121 | 9.581031e-54 | -8.615850e-47 |
| Msa0028930 | Msa0763990 | 0.802537 | 5.353468e-49 | -8.615850e-47 |
| Msa0028930 | Msa0764010 | 0.806630 | 7.494411e-50 | -8.615850e-47 |
| Msa0028930 | Msa0780930 | 0.824959 | 6.082487e-54 | -8.615850e-47 |
| Msa0028930 | Msa0783860 | 0.800215 | 1.600122e-48 | -8.615850e-47 |
| Msa0028930 | Msa0786750 | 0.800187 | 1.621026e-48 | -8.615850e-47 |
| Msa0028930 | Msa0791090 | 0.807983 | 3.871325e-50 | -8.615850e-47 |
| Msa0028930 | Msa0798290 | 0.804788 | 1.825865e-49 | -8.615850e-47 |
| Msa0028930 | Msa0805970 | 0.802171 | 6.367846e-49 | -8.615850e-47 |
| Msa0028930 | Msa0817460 | 0.800869 | 1.176910e-48 | -8.615850e-47 |
| Msa0028930 | Msa0818770 | 0.805474 | 1.311654e-49 | -8.615850e-47 |
| Msa0028930 | Msa0822500 | 0.826568 | 2.526301e-54 | -8.615850e-47 |
| Msa0028930 | Msa0831100 | 0.818399 | 2.000530e-52 | -8.615850e-47 |
| Msa0028930 | Msa0833190 | -0.807760 | 4.317824e-50 | -8.615850e-47 |
| Msa0028930 | Msa0849440 | 0.821009 | 5.070933e-53 | -8.615850e-47 |
| Msa0028930 | Msa0870650 | 0.801370 | 9.297244e-49 | -8.615850e-47 |
| Msa0028930 | Msa0876810 | 0.807886 | 4.059861e-50 | -8.615850e-47 |
| Msa0028930 | Msa0878510 | 0.802007 | 6.881042e-49 | -8.615850e-47 |
| Msa0028930 | Msa0892640 | 0.807688 | 4.472166e-50 | -8.615850e-47 |
| Msa0028930 | Msa0894400 | 0.805468 | 1.315648e-49 | -8.615850e-47 |
| Msa0028930 | Msa0897200 | 0.813587 | 2.373820e-51 | -8.615850e-47 |
| Msa0028930 | Msa0901110 | 0.816027 | 6.832946e-52 | -8.615850e-47 |
| Msa0028930 | Msa0903780 | 0.809885 | 1.516986e-50 | -8.615850e-47 |
| Msa0028930 | Msa0923780 | 0.819087 | 1.396203e-52 | -8.615850e-47 |
| Msa0028930 | Msa0928120 | 0.800484 | 1.410183e-48 | -8.615850e-47 |
| Msa0028930 | Msa0934140 | 0.831616 | 1.509198e-55 | -8.615850e-47 |
| Msa0028930 | Msa0940580 | 0.800175 | 1.630364e-48 | -8.615850e-47 |
| Msa0028930 | Msa0944200 | 0.816092 | 6.609768e-52 | -8.615850e-47 |
| Msa0028930 | Msa0944610 | 0.809955 | 1.464896e-50 | -8.615850e-47 |
| Msa0028930 | Msa0945240 | 0.839030 | 2.022090e-57 | -8.615850e-47 |
| Msa0028930 | Msa0962840 | 0.803938 | 2.745489e-49 | -8.615850e-47 |
| Msa0028930 | Msa0971650 | 0.815153 | 1.069746e-51 | -8.615850e-47 |
| Msa0028930 | Msa0974950 | 0.803474 | 3.426048e-49 | -8.615850e-47 |
| Msa0028930 | Msa0986510 | 0.812591 | 3.924743e-51 | -8.615850e-47 |
| Msa0028930 | Msa0997430 | 0.811229 | 7.772477e-51 | -8.615850e-47 |
| Msa0028930 | Msa1006840 | 0.824898 | 6.289928e-54 | -8.615850e-47 |
| Msa0028930 | Msa1012740 | 0.801727 | 7.853771e-49 | -8.615850e-47 |
| Msa0028930 | Msa1024680 | 0.817704 | 2.871854e-52 | -8.615850e-47 |
| Msa0028930 | Msa1027360 | 0.813209 | 2.874344e-51 | -8.615850e-47 |
| Msa0028930 | Msa1029070 | 0.801919 | 7.174156e-49 | -8.615850e-47 |
| Msa0028930 | Msa1034500 | 0.841710 | 4.028169e-58 | -8.615850e-47 |
| Msa0028930 | Msa1051330 | 0.800650 | 1.304914e-48 | -8.615850e-47 |
| Msa0028930 | Msa1063420 | 0.826843 | 2.171078e-54 | -8.615850e-47 |
| Msa0028930 | Msa1070390 | 0.822762 | 1.991867e-53 | -8.615850e-47 |
| Msa0028930 | Msa1071050 | 0.862768 | 4.010698e-64 | -8.615850e-47 |
| Msa0028930 | Msa1072710 | 0.807051 | 6.104359e-50 | -8.615850e-47 |
| Msa0028930 | Msa1076560 | 0.804818 | 1.799513e-49 | -8.615850e-47 |
| Msa0028930 | Msa1078170 | 0.813658 | 2.290019e-51 | -8.615850e-47 |
| Msa0028930 | Msa1079230 | 0.803105 | 4.084896e-49 | -8.615850e-47 |
| Msa0028930 | Msa1089320 | 0.821491 | 3.925632e-53 | -8.615850e-47 |
| Msa0028930 | Msa1089450 | 0.835585 | 1.539929e-56 | -8.615850e-47 |
| Msa0028930 | Msa1095620 | 0.825273 | 5.129376e-54 | -8.615850e-47 |
| Msa0028930 | Msa1098890 | 0.829182 | 5.939081e-55 | -8.615850e-47 |
| Msa0028930 | Msa1118450 | 0.853244 | 2.715701e-61 | -8.615850e-47 |
| Msa0028930 | Msa1121260 | 0.822128 | 2.795468e-53 | -8.615850e-47 |
| Msa0028930 | Msa1123350 | 0.812568 | 3.971775e-51 | -8.615850e-47 |
| Msa0028930 | Msa1123380 | 0.800147 | 1.651884e-48 | -8.615850e-47 |
| Msa0028930 | Msa1123770 | 0.812565 | 3.976815e-51 | -8.615850e-47 |
| Msa0028930 | Msa1127540 | 0.815129 | 1.082771e-51 | -8.615850e-47 |
| Msa0028930 | Msa1127590 | 0.834604 | 2.722270e-56 | -8.615850e-47 |
| Msa0028930 | Msa1135890 | 0.828100 | 1.084272e-54 | -8.615850e-47 |
| Msa0028930 | Msa1145240 | 0.820932 | 5.282336e-53 | -8.615850e-47 |
| Msa0028930 | Msa1156160 | 0.800772 | 1.232296e-48 | -8.615850e-47 |
| Msa0028930 | Msa1158230 | 0.829090 | 6.250975e-55 | -8.615850e-47 |
| Msa0028930 | Msa1167010 | 0.801133 | 1.039718e-48 | -8.615850e-47 |
| Msa0028930 | Msa1169910 | 0.813042 | 3.126171e-51 | -8.615850e-47 |
| Msa0028930 | Msa1173300 | 0.801887 | 7.284110e-49 | -8.615850e-47 |
| Msa0028930 | Msa1193290 | 0.809869 | 1.528586e-50 | -8.615850e-47 |
| Msa0028930 | Msa1201640 | 0.820176 | 7.876348e-53 | -8.615850e-47 |
| Msa0028930 | Msa1202580 | 0.806407 | 8.349287e-50 | -8.615850e-47 |
| Msa0028930 | Msa1206270 | 0.808935 | 2.424831e-50 | -8.615850e-47 |
| Msa0028930 | Msa1206650 | 0.800904 | 1.158015e-48 | -8.615850e-47 |
| Msa0028930 | Msa1209200 | 0.827343 | 1.648976e-54 | -8.615850e-47 |
| Msa0028930 | Msa1216260 | 0.829257 | 5.695094e-55 | -8.615850e-47 |
| Msa0028930 | Msa1218450 | 0.841602 | 4.302292e-58 | -8.615850e-47 |
| Msa0028930 | Msa1219000 | 0.819595 | 1.069708e-52 | -8.615850e-47 |
| Msa0028930 | Msa1226270 | 0.824207 | 9.145209e-54 | -8.615850e-47 |
| Msa0028930 | Msa1226470 | 0.819706 | 1.008589e-52 | -8.615850e-47 |
| Msa0028930 | Msa1236160 | -0.824446 | 8.038568e-54 | -8.615850e-47 |
| Msa0028930 | Msa1243870 | 0.826482 | 2.648099e-54 | -8.615850e-47 |
| Msa0028930 | Msa1246360 | 0.805244 | 1.465945e-49 | -8.615850e-47 |
| Msa0028930 | Msa1250110 | 0.812669 | 3.774184e-51 | -8.615850e-47 |
| Msa0028930 | Msa1262890 | 0.807035 | 6.153255e-50 | -8.615850e-47 |
| Msa0028930 | Msa1264210 | 0.804998 | 1.650107e-49 | -8.615850e-47 |
| Msa0028930 | Msa1265280 | 0.802908 | 4.488290e-49 | -8.615850e-47 |
| Msa0028930 | Msa1265590 | 0.856676 | 2.738061e-62 | -8.615850e-47 |
| Msa0028930 | Msa1265630 | 0.807706 | 4.433863e-50 | -8.615850e-47 |
| Msa0028930 | Msa1270660 | 0.804550 | 2.046766e-49 | -8.615850e-47 |
| Msa0028930 | Msa1275110 | 0.804540 | 2.056730e-49 | -8.615850e-47 |
| Msa0028930 | Msa1275590 | 0.810336 | 1.212411e-50 | -8.615850e-47 |
| Msa0028930 | Msa1277080 | 0.807256 | 5.522905e-50 | -8.615850e-47 |
| Msa0028930 | Msa1307180 | 0.825661 | 4.150677e-54 | -8.615850e-47 |
| Msa0028930 | Msa1307600 | 0.809338 | 1.988464e-50 | -8.615850e-47 |
| Msa0028930 | Msa1315750 | 0.808214 | 3.457658e-50 | -8.615850e-47 |
| Msa0028930 | Msa1316360 | 0.829733 | 4.364393e-55 | -8.615850e-47 |
| Msa0028930 | Msa1317960 | 0.810891 | 9.198054e-51 | -8.615850e-47 |
| Msa0028930 | Msa1330270 | 0.811685 | 6.187665e-51 | -8.615850e-47 |
| Msa0028930 | Msa1332760 | 0.818225 | 2.190272e-52 | -8.615850e-47 |
| Msa0028930 | Msa1335160 | 0.808817 | 2.570434e-50 | -8.615850e-47 |
| Msa0028930 | Msa1336190 | 0.800818 | 1.205823e-48 | -8.615850e-47 |
| Msa0028930 | Msa1337480 | 0.821395 | 4.130554e-53 | -8.615850e-47 |
| Msa0028930 | Msa1340200 | 0.809460 | 1.871554e-50 | -8.615850e-47 |
| Msa0028930 | Msa1340550 | 0.800934 | 1.141667e-48 | -8.615850e-47 |
| Msa0028930 | Msa1344310 | 0.807357 | 5.257900e-50 | -8.615850e-47 |
| Msa0028930 | Msa1348650 | -0.804421 | 2.177389e-49 | -8.615850e-47 |
| Msa0028930 | Msa1349520 | 0.839680 | 1.370912e-57 | -8.615850e-47 |
| Msa0028930 | Msa1351540 | 0.819680 | 1.022714e-52 | -8.615850e-47 |
| Msa0028930 | Msa1357890 | 0.811374 | 7.226783e-51 | -8.615850e-47 |
| Msa0028930 | Msa1359560 | 0.816947 | 4.252726e-52 | -8.615850e-47 |
| Msa0028930 | Msa1360980 | 0.813780 | 2.151845e-51 | -8.615850e-47 |
| Msa0028930 | Msa1364210 | 0.822711 | 2.046379e-53 | -8.615850e-47 |
| Msa0028930 | Msa1369690 | 0.808724 | 2.691105e-50 | -8.615850e-47 |
| Msa0028930 | Msa1369890 | 0.823532 | 1.316416e-53 | -8.615850e-47 |
| Msa0028930 | Msa1372280 | 0.801924 | 7.157079e-49 | -8.615850e-47 |
| Msa0028930 | Msa1373820 | 0.811992 | 5.304240e-51 | -8.615850e-47 |
| Msa0028930 | Msa1378410 | 0.803035 | 4.224640e-49 | -8.615850e-47 |
| Msa0028930 | Msa1381480 | 0.802493 | 5.464994e-49 | -8.615850e-47 |
| Msa0028930 | Msa1383530 | 0.830023 | 3.709452e-55 | -8.615850e-47 |
| Msa0028930 | Msa1383740 | 0.803294 | 3.733415e-49 | -8.615850e-47 |
| Msa0028930 | Msa1384870 | 0.802795 | 4.734896e-49 | -8.615850e-47 |
| Msa0028930 | Msa1385720 | 0.812558 | 3.991974e-51 | -8.615850e-47 |
| Msa0028930 | Msa1393430 | 0.806398 | 8.389021e-50 | -8.615850e-47 |
| Msa0028930 | Msa1393840 | -0.838346 | 3.036832e-57 | -8.615850e-47 |
| Msa0028930 | Msa1398090 | 0.811905 | 5.540082e-51 | -8.615850e-47 |
| Msa0028930 | Msa1407190 | 0.815706 | 8.055888e-52 | -8.615850e-47 |
| Msa0028930 | Msa1411950 | 0.832815 | 7.622998e-56 | -8.615850e-47 |
| Msa0028930 | Msa1412130 | 0.809134 | 2.198495e-50 | -8.615850e-47 |
| Msa0028930 | Msa1412660 | 0.802123 | 6.512536e-49 | -8.615850e-47 |
| Msa0028930 | Msa1416370 | 0.822753 | 2.001532e-53 | -8.615850e-47 |
| Msa0028930 | Msa1418240 | 0.806932 | 6.470721e-50 | -8.615850e-47 |
| Msa0028930 | Msa1424350 | 0.821712 | 3.490656e-53 | -8.615850e-47 |
| Msa0028930 | Msa1425880 | 0.808768 | 2.633349e-50 | -8.615850e-47 |
| Msa0028930 | Msa1432130 | 0.811046 | 8.514355e-51 | -8.615850e-47 |
| Msa0028930 | Msa1434090 | 0.836747 | 7.807887e-57 | -8.615850e-47 |
| Msa0028930 | Msa1437270 | 0.826098 | 3.268523e-54 | -8.615850e-47 |
| Msa0028930 | Msa1440310 | 0.858877 | 6.093507e-63 | -8.615850e-47 |
| Msa0028930 | Msa1440880 | 0.817726 | 2.840092e-52 | -8.615850e-47 |
| Msa0028930 | Msa1446820 | 0.819949 | 8.875969e-53 | -8.615850e-47 |
| Msa0028930 | Msa1447180 | 0.800753 | 1.243285e-48 | -8.615850e-47 |
| Msa0028930 | Msa1448490 | 0.809453 | 1.878209e-50 | -8.615850e-47 |
| Msa0028930 | Msa1450720 | 0.843985 | 1.000482e-58 | -8.615850e-47 |
| Msa0028930 | Msa1451160 | 0.827480 | 1.528666e-54 | -8.615850e-47 |
| Msa0028930 | Msa1454450 | 0.804431 | 2.167338e-49 | -8.615850e-47 |
| Msa0028930 | Msa1454680 | 0.812603 | 3.901870e-51 | -8.615850e-47 |
| Msa0028930 | Msa1458090 | 0.803323 | 3.682202e-49 | -8.615850e-47 |
| Msa0028930 | Msa1458770 | 0.812131 | 4.947907e-51 | -8.615850e-47 |
| Msa0028930 | Msa1461540 | 0.812426 | 4.266139e-51 | -8.615850e-47 |
| Msa0028930 | Msa1462360 | 0.805241 | 1.467727e-49 | -8.615850e-47 |
| Msa0028930 | Msa1466540 | 0.802503 | 5.440723e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0028930 | MtrunA17_Chr1g0185561 | 96.248 | 533 | 20 | 0 | 12 | 544 | 1 | 533 | 0.0 | 1035 |
| Msa0028930 | MtrunA17_Chr1g0205881 | 67.778 | 540 | 169 | 3 | 7 | 544 | 2 | 538 | 0.0 | 713 |
| Msa0028930 | MtrunA17_Chr5g0414351 | 27.742 | 310 | 193 | 5 | 215 | 494 | 216 | 524 | 3.73e-22 | 100 |
| Msa0028930 | MtrunA17_Chr5g0414351 | 27.138 | 269 | 196 | 0 | 235 | 503 | 209 | 477 | 5.40e-20 | 93.6 |
| Msa0028930 | MtrunA17_Chr5g0414351 | 24.658 | 292 | 158 | 7 | 215 | 473 | 328 | 590 | 1.61e-11 | 67.0 |
| Msa0028930 | MtrunA17_Chr3g0134391 | 46.067 | 89 | 45 | 2 | 28 | 115 | 36 | 122 | 6.93e-18 | 81.3 |
| Msa0028930 | MtrunA17_Chr1g0152901 | 35.000 | 100 | 63 | 1 | 17 | 116 | 17 | 114 | 1.87e-14 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0028930 | AT3G63130.1 | 69.109 | 505 | 149 | 3 | 12 | 515 | 1 | 499 | 0.0 | 705 |
| Msa0028930 | AT3G63130.2 | 69.109 | 505 | 149 | 3 | 12 | 515 | 1 | 499 | 0.0 | 705 |
| Msa0028930 | AT5G19320.1 | 67.546 | 493 | 158 | 2 | 22 | 512 | 10 | 502 | 0.0 | 637 |
| Msa0028930 | AT5G19320.2 | 67.546 | 493 | 158 | 2 | 22 | 512 | 10 | 502 | 0.0 | 637 |
| Msa0028930 | AT3G06000.1 | 50.000 | 184 | 79 | 2 | 332 | 515 | 16 | 186 | 2.68e-47 | 164 |
| Msa0028930 | AT1G10510.1 | 30.292 | 274 | 191 | 0 | 230 | 503 | 203 | 476 | 4.45e-25 | 109 |
| Msa0028930 | AT1G10510.1 | 30.249 | 281 | 191 | 4 | 222 | 498 | 307 | 586 | 7.32e-21 | 96.7 |
| Msa0028930 | AT1G47200.1 | 36.697 | 109 | 67 | 1 | 24 | 132 | 56 | 162 | 6.83e-15 | 73.6 |
| Msa0028930 | AT5G43070.1 | 41.111 | 90 | 51 | 1 | 23 | 112 | 39 | 126 | 7.77e-15 | 72.8 |
Find 126 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCACCGTCACTGGAAATTT+TGG | 0.158218 | 1_1:+54062252 | Msa0028930:CDS |
| GCAACTTAAATCCAGGTTTC+TGG | 0.190819 | 1_1:-54062501 | None:intergenic |
| GTTTCTAGGTTCTGTTGATA+TGG | 0.260007 | 1_1:+54061091 | Msa0028930:intron |
| CCTCAGTTATTTGAACTTAG+AGG | 0.267220 | 1_1:+54062189 | Msa0028930:CDS |
| CGTCTCCAGTCATGTTATTA+TGG | 0.271627 | 1_1:-54061940 | None:intergenic |
| ACCTGACATGCTGGGTCCTT+TGG | 0.274094 | 1_1:+54062591 | Msa0028930:CDS |
| GGTCGCAGAGCTTTCATTAA+TGG | 0.274791 | 1_1:+54061500 | Msa0028930:CDS |
| CATATCTTTGTAAAAGAGTT+TGG | 0.287321 | 1_1:-54061560 | None:intergenic |
| ATGTCTATTGCAAACATAAT+TGG | 0.305651 | 1_1:-54062764 | None:intergenic |
| GTCGCAGAGCTTTCATTAAT+GGG | 0.308702 | 1_1:+54061501 | Msa0028930:CDS |
| CAAGAGGGAAGGAGGAGAAT+GGG | 0.312236 | 1_1:+54061420 | Msa0028930:CDS |
| TTGCTCTTGCTGAAGCGCTT+GGG | 0.313724 | 1_1:+54062056 | Msa0028930:CDS |
| TGTTTCAGTAATAGAAGTTT+TGG | 0.325309 | 1_1:+54061581 | Msa0028930:CDS |
| TTCATCTTTCAATTCATTCT+CGG | 0.330579 | 1_1:-54062365 | None:intergenic |
| ACTTCAATAGCTTCTGCTTC+TGG | 0.333568 | 1_1:-54061695 | None:intergenic |
| ATATATGTTCTTAATATATC+TGG | 0.334642 | 1_1:+54062874 | Msa0028930:three_prime_UTR |
| GTTGCTCTTGCTGAAGCGCT+TGG | 0.338191 | 1_1:+54062055 | Msa0028930:CDS |
| CCATTCTCCTCCTTCCCTCT+TGG | 0.345911 | 1_1:-54061419 | None:intergenic |
| TCATCAACGTCCTCTCCTTC+AGG | 0.355513 | 1_1:-54062625 | None:intergenic |
| ATATCTGGCAAGACAAGAAA+TGG | 0.359192 | 1_1:+54062889 | Msa0028930:three_prime_UTR |
| TGAGATTTAAGAAGATTCAT+AGG | 0.375062 | 1_1:+54062702 | Msa0028930:exon |
| TGTGAAACGTTCCCCAGCTT+TGG | 0.391512 | 1_1:+54061988 | Msa0028930:CDS |
| AGCCCTTGCTAATGCTTTGA+AGG | 0.393810 | 1_1:+54062225 | Msa0028930:CDS |
| CCCTTCCACTGAGAAGCTTA+AGG | 0.398979 | 1_1:+54061907 | Msa0028930:CDS |
| CCAAGAGGGAAGGAGGAGAA+TGG | 0.407320 | 1_1:+54061419 | Msa0028930:CDS |
| AGAGCTTCTAAAACCATTGA+TGG | 0.410753 | 1_1:+54061535 | Msa0028930:CDS |
| GAAGGAATCTGCACCGTCAC+TGG | 0.422448 | 1_1:+54062243 | Msa0028930:CDS |
| AAAGAGTTTGGTCCCATCAA+TGG | 0.422926 | 1_1:-54061548 | None:intergenic |
| CACCCATGGCATTATTTGAC+AGG | 0.423148 | 1_1:-54061769 | None:intergenic |
| TCCAAAGGACCCAGCATGTC+AGG | 0.424980 | 1_1:-54062592 | None:intergenic |
| GAGCTTTATTTGATGAATGA+TGG | 0.428296 | 1_1:+54061845 | Msa0028930:CDS |
| ACAAATTTGATCACATGGTC+TGG | 0.437019 | 1_1:+54062451 | Msa0028930:CDS |
| TGGGGAGTTGATATCTGAAA+AGG | 0.439605 | 1_1:+54061439 | Msa0028930:CDS |
| AAATAATGCCATGGGTGAAA+AGG | 0.442002 | 1_1:+54061775 | Msa0028930:CDS |
| GCCAACTTCATTTCTGATGA+AGG | 0.446090 | 1_1:+54062535 | Msa0028930:CDS |
| CACCGAAAATCTTCCAAAGC+TGG | 0.450378 | 1_1:-54062001 | None:intergenic |
| AATAATGCCATGGGTGAAAA+GGG | 0.461364 | 1_1:+54061776 | Msa0028930:CDS |
| CATAAGCTTACTCGATTCCT+TGG | 0.462204 | 1_1:-54061375 | None:intergenic |
| AGAAAATAGACGGAGTCGTC+AGG | 0.468919 | 1_1:-54061214 | None:intergenic |
| GGAAATGAATTGCCAGCAAA+AGG | 0.470098 | 1_1:-54062952 | None:intergenic |
| CGGTGTTCATCTACCAGAGT+AGG | 0.471423 | 1_1:+54062019 | Msa0028930:CDS |
| AGGTGCAGGTTTAATTAGTA+AGG | 0.472052 | 1_1:+54062387 | Msa0028930:CDS |
| ATCTTTAATTGATATTAGCA+TGG | 0.476224 | 1_1:-54061630 | None:intergenic |
| CCTTAAATCACAAAATGACT+TGG | 0.476235 | 1_1:+54061820 | Msa0028930:CDS |
| GGCCTCCAAGTCAGAGTACT+AGG | 0.483558 | 1_1:+54061162 | Msa0028930:CDS |
| AAATGGGCAAATGGTATGAA+TGG | 0.483563 | 1_1:+54062906 | Msa0028930:three_prime_UTR |
| ATCGAGTAAGCTTATGTTGG+AGG | 0.487701 | 1_1:+54061382 | Msa0028930:CDS |
| ACCGAAAATCTTCCAAAGCT+GGG | 0.488948 | 1_1:-54062000 | None:intergenic |
| GAAGCTGTTGTCCAGAAACC+TGG | 0.491319 | 1_1:+54062490 | Msa0028930:CDS |
| CGGATAAATTTAACTTGGTG+AGG | 0.494899 | 1_1:-54062345 | None:intergenic |
| TGCTCTTGCTGAAGCGCTTG+GGG | 0.498032 | 1_1:+54062057 | Msa0028930:CDS |
| TAAATCACAAAATGACTTGG+AGG | 0.498668 | 1_1:+54061823 | Msa0028930:CDS |
| CAAGACAAGAAATGGGCAAA+TGG | 0.499438 | 1_1:+54062897 | Msa0028930:three_prime_UTR |
| GAGAATGAATTGAAAGATGA+AGG | 0.503082 | 1_1:+54062367 | Msa0028930:CDS |
| CATTTCCATAATAACATGAC+TGG | 0.503127 | 1_1:+54061935 | Msa0028930:CDS |
| AACATGTTTGGTGTGGAAGC+TGG | 0.506518 | 1_1:+54062115 | Msa0028930:CDS |
| CCAACTTCATTTCTGATGAA+GGG | 0.507173 | 1_1:+54062536 | Msa0028930:CDS |
| GATTTGCGTGACAACATGTT+TGG | 0.507634 | 1_1:+54062103 | Msa0028930:CDS |
| AATTAAAGATCAACTGAAAG+AGG | 0.511896 | 1_1:+54061643 | Msa0028930:CDS |
| TGCAACCCAACACTTTGAAA+AGG | 0.512976 | 1_1:+54061313 | Msa0028930:CDS |
| TCTGTAAGATCAGCAAATAC+AGG | 0.513065 | 1_1:-54062160 | None:intergenic |
| ATATTCAGCAACTTAAATCC+AGG | 0.517009 | 1_1:-54062508 | None:intergenic |
| GCAGAACTCCCATCACCATC+AGG | 0.519389 | 1_1:-54061338 | None:intergenic |
| TGCTGTGCAAATTTATGCCA+AGG | 0.523338 | 1_1:+54061358 | Msa0028930:CDS |
| ACCTTAAGCTTCTCAGTGGA+AGG | 0.523910 | 1_1:-54061908 | None:intergenic |
| GGGGAGTTGATATCTGAAAA+GGG | 0.524553 | 1_1:+54061440 | Msa0028930:CDS |
| TATATTATTGCATAGGATTG+TGG | 0.526265 | 1_1:+54060455 | Msa0028930:intron |
| TCTTTAATTGATATTAGCAT+GGG | 0.527745 | 1_1:-54061629 | None:intergenic |
| AACCTAGTACTCTGACTTGG+AGG | 0.528886 | 1_1:-54061164 | None:intergenic |
| ATGAATCTTCTTAAATCTCA+AGG | 0.529266 | 1_1:-54062699 | None:intergenic |
| GAAAAGGAGCCTGATGGTGA+TGG | 0.530765 | 1_1:+54061329 | Msa0028930:CDS |
| TAACAAAGATGAGGCTGAGA+AGG | 0.532357 | 1_1:+54061256 | Msa0028930:CDS |
| AACAGCTTCTGCCAACAGCT+TGG | 0.534878 | 1_1:-54062476 | None:intergenic |
| TGTTAGTTGAACGAATGGTC+AGG | 0.535510 | 1_1:+54061189 | Msa0028930:CDS |
| TAACCTGTCAAATAATGCCA+TGG | 0.536436 | 1_1:+54061766 | Msa0028930:CDS |
| ATTCTCGGATAAATTTAACT+TGG | 0.537197 | 1_1:-54062350 | None:intergenic |
| CCCTTCATCAGAAATGAAGT+TGG | 0.537535 | 1_1:-54062536 | None:intergenic |
| TATCTGGCAAGACAAGAAAT+GGG | 0.538330 | 1_1:+54062890 | Msa0028930:three_prime_UTR |
| TTTGTGATTTAAGGAGTGCC+CGG | 0.539029 | 1_1:-54061811 | None:intergenic |
| AGGTTTAATTAGTAAGGCGC+TGG | 0.544570 | 1_1:+54062393 | Msa0028930:CDS |
| AAGAGGGAAGGAGGAGAATG+GGG | 0.549859 | 1_1:+54061421 | Msa0028930:CDS |
| GTTGATGTTAGTTGAACGAA+TGG | 0.555548 | 1_1:+54061184 | Msa0028930:CDS |
| TCTACCAGAGTAGGCTCTGA+AGG | 0.560072 | 1_1:+54062028 | Msa0028930:CDS |
| GAAGGATGCAAAGGAAATTG+AGG | 0.561870 | 1_1:+54061274 | Msa0028930:CDS |
| AAGAGGACCAAGAGGGAAGG+AGG | 0.565309 | 1_1:+54061412 | Msa0028930:CDS |
| ATCAACCTAGTACTCTGACT+TGG | 0.566163 | 1_1:-54061167 | None:intergenic |
| ATTCCTTCAAAGCATTAGCA+AGG | 0.570197 | 1_1:-54062228 | None:intergenic |
| AGGAGAGGACGTTGATGAAG+AGG | 0.572691 | 1_1:+54062630 | Msa0028930:CDS |
| AGTAAGGCGCTGGAAGGTCG+TGG | 0.574225 | 1_1:+54062403 | Msa0028930:CDS |
| TTCCTTCAAAGCATTAGCAA+GGG | 0.575261 | 1_1:-54062227 | None:intergenic |
| GAGCTTCTAAAACCATTGAT+GGG | 0.582760 | 1_1:+54061536 | Msa0028930:CDS |
| GAACACTTTCAATCAAGTTG+TGG | 0.586485 | 1_1:+54061141 | Msa0028930:CDS |
| AACCTGTCAAATAATGCCAT+GGG | 0.587490 | 1_1:+54061767 | Msa0028930:CDS |
| TCAGGATCATTCTCATCCAA+AGG | 0.589310 | 1_1:-54062607 | None:intergenic |
| GGAATCGAGTAAGCTTATGT+TGG | 0.591102 | 1_1:+54061379 | Msa0028930:CDS |
| GACTTGGAGTCAAAACTGAA+AGG | 0.592400 | 1_1:+54062676 | Msa0028930:CDS |
| ACCACCTTCAGAGCCTACTC+TGG | 0.593405 | 1_1:-54062032 | None:intergenic |
| ATGGTCTGGAGCCAAGCTGT+TGG | 0.593553 | 1_1:+54062465 | Msa0028930:CDS |
| TGATTCTGATAATGATGACT+TGG | 0.594422 | 1_1:+54062660 | Msa0028930:CDS |
| CAGAGCTTTCATTAATGGGG+AGG | 0.598559 | 1_1:+54061505 | Msa0028930:CDS |
| TTAATTAGTAAGGCGCTGGA+AGG | 0.600794 | 1_1:+54062397 | Msa0028930:CDS |
| GAATTGAAAGATGAAGGTGC+AGG | 0.601464 | 1_1:+54062373 | Msa0028930:CDS |
| TAATGCCATGGGTGAAAAGG+GGG | 0.611795 | 1_1:+54061778 | Msa0028930:CDS |
| AAAAGGAGCCTGATGGTGAT+GGG | 0.618474 | 1_1:+54061330 | Msa0028930:CDS |
| TACTTTCTAGAGAAAATAGA+CGG | 0.618656 | 1_1:-54061224 | None:intergenic |
| GATGAATGATGGTATATCAG+AGG | 0.619244 | 1_1:+54061856 | Msa0028930:CDS |
| TGAGGCTGAGAAGGATGCAA+AGG | 0.619486 | 1_1:+54061265 | Msa0028930:CDS |
| ATATCCAAAATTTCCAGTGA+CGG | 0.620331 | 1_1:-54062256 | None:intergenic |
| GAAAAGAGGACCAAGAGGGA+AGG | 0.620402 | 1_1:+54061409 | Msa0028930:CDS |
| CACTTTGAAAAGGAGCCTGA+TGG | 0.620964 | 1_1:+54061323 | Msa0028930:CDS |
| CCTTAAGCTTCTCAGTGGAA+GGG | 0.628373 | 1_1:-54061907 | None:intergenic |
| TGAGTACAAATTTGATCACA+TGG | 0.630339 | 1_1:+54062446 | Msa0028930:CDS |
| CCGAAAATCTTCCAAAGCTG+GGG | 0.630768 | 1_1:-54061999 | None:intergenic |
| TTGGATGAGAATGATCCTGA+AGG | 0.631234 | 1_1:+54062610 | Msa0028930:CDS |
| ATAATGCCATGGGTGAAAAG+GGG | 0.631439 | 1_1:+54061777 | Msa0028930:CDS |
| TGAGAATGATCCTGAAGGAG+AGG | 0.636079 | 1_1:+54062615 | Msa0028930:CDS |
| TGATTGAAAGTGTTCGATGT+TGG | 0.637029 | 1_1:-54061133 | None:intergenic |
| AATAACATGACTGGAGACGA+AGG | 0.637173 | 1_1:+54061944 | Msa0028930:CDS |
| TGGACTTCTTAACAAAGATG+AGG | 0.646938 | 1_1:+54061247 | Msa0028930:CDS |
| AAGAACCTTAAGCTTCTCAG+TGG | 0.653888 | 1_1:-54061912 | None:intergenic |
| CCTCTAAGTTCAAATAACTG+AGG | 0.660358 | 1_1:-54062189 | None:intergenic |
| GCGTGACAACATGTTTGGTG+TGG | 0.661175 | 1_1:+54062108 | Msa0028930:CDS |
| TCGCAGAGCTTTCATTAATG+GGG | 0.661648 | 1_1:+54061502 | Msa0028930:CDS |
| TATTTGAACTTAGAGGACGA+TGG | 0.662229 | 1_1:+54062196 | Msa0028930:CDS |
| ACCAGAGTAGGCTCTGAAGG+TGG | 0.671940 | 1_1:+54062031 | Msa0028930:CDS |
| AGTGTTCGATGTTGGTACGA+CGG | 0.709109 | 1_1:-54061125 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAGAAAAGTGTATAAATAA+AGG | + | chr1_1:54059843-54059862 | Msa0028930:intron | 15.0% |
| !!! | AAGAAAAGTGTATAAATAAA+GGG | + | chr1_1:54059844-54059863 | Msa0028930:intron | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | + | chr1_1:54059908-54059927 | Msa0028930:intron | 15.0% |
| !! | TGATGATTAAAAAAATTAGT+TGG | - | chr1_1:54060098-54060117 | None:intergenic | 15.0% |
| !!! | TTTTTCATATGGTATAATTA+TGG | + | chr1_1:54060689-54060708 | Msa0028930:intron | 15.0% |
| !!! | TTTTCATATGGTATAATTAT+GGG | + | chr1_1:54060690-54060709 | Msa0028930:intron | 15.0% |
| !!! | CATTTTAATTTTTGAAAACT+TGG | + | chr1_1:54060778-54060797 | Msa0028930:intron | 15.0% |
| !!! | GATATATTTTAACAACAATA+GGG | - | chr1_1:54060907-54060926 | None:intergenic | 15.0% |
| !!! | TTGATTTTGATTTTATACTA+TGG | + | chr1_1:54060951-54060970 | Msa0028930:intron | 15.0% |
| !!! | ATTAATGAATTTTTAAGAGT+AGG | + | chr1_1:54060993-54061012 | Msa0028930:intron | 15.0% |
| !! | ATATATGTTCTTAATATATC+TGG | + | chr1_1:54062874-54062893 | Msa0028930:three_prime_UTR | 15.0% |
| !! | TTGAAAATGAAAAAATGTGA+TGG | - | chr1_1:54059715-54059734 | None:intergenic | 20.0% |
| !! | AGTAATAAAGATATTTGGAT+TGG | - | chr1_1:54059777-54059796 | None:intergenic | 20.0% |
| !!! | AGAAAAGTGTATAAATAAAG+GGG | + | chr1_1:54059845-54059864 | Msa0028930:intron | 20.0% |
| !! | GAAAGTGAAATATATTGTAT+TGG | + | chr1_1:54059867-54059886 | Msa0028930:intron | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+GGG | + | chr1_1:54059978-54059997 | Msa0028930:intron | 20.0% |
| !! | CTTATACTATATTATTGCAT+AGG | + | chr1_1:54060448-54060467 | Msa0028930:intron | 20.0% |
| !!! | CGATATATTTTAACAACAAT+AGG | - | chr1_1:54060908-54060927 | None:intergenic | 20.0% |
| !!! | TTATTGTTATACTTGTTTCT+AGG | + | chr1_1:54061077-54061096 | Msa0028930:intron | 20.0% |
| !! | TCTTTAATTGATATTAGCAT+GGG | - | chr1_1:54061632-54061651 | None:intergenic | 20.0% |
| !! | ATCTTTAATTGATATTAGCA+TGG | - | chr1_1:54061633-54061652 | None:intergenic | 20.0% |
| !!! | AGATTTTTGATTTCATAACT+TGG | + | chr1_1:54062831-54062850 | Msa0028930:three_prime_UTR | 20.0% |
| !!! | TATGAATGGTAGAAATTTTT+GGG | + | chr1_1:54062920-54062939 | Msa0028930:three_prime_UTR | 20.0% |
| !! | AAATGAAAAAATGTGATGGA+TGG | - | chr1_1:54059711-54059730 | None:intergenic | 25.0% |
| !! | AAAGATATTTGGATTGGATA+GGG | - | chr1_1:54059771-54059790 | None:intergenic | 25.0% |
| !! | TAAAGATATTTGGATTGGAT+AGG | - | chr1_1:54059772-54059791 | None:intergenic | 25.0% |
| ! | GAGGTAGTAATAAAGATATT+TGG | - | chr1_1:54059782-54059801 | None:intergenic | 25.0% |
| !! | TTGAAATGAGTCAGTTATTT+TGG | + | chr1_1:54059955-54059974 | Msa0028930:intron | 25.0% |
| !!! | TGAAATGAGTCAGTTATTTT+GGG | + | chr1_1:54059956-54059975 | Msa0028930:intron | 25.0% |
| !!! | GGACACTTTTTTTTAGAAAA+TGG | + | chr1_1:54059977-54059996 | Msa0028930:intron | 25.0% |
| !!! | TTCAGTTCTGTTTCATTTTT+AGG | + | chr1_1:54060302-54060321 | Msa0028930:intron | 25.0% |
| !!! | TCAGTTCTGTTTCATTTTTA+GGG | + | chr1_1:54060303-54060322 | Msa0028930:intron | 25.0% |
| ! | TTACTTCTACAAAGTAACTA+TGG | - | chr1_1:54060353-54060372 | None:intergenic | 25.0% |
| ! | TATATTATTGCATAGGATTG+TGG | + | chr1_1:54060455-54060474 | Msa0028930:intron | 25.0% |
| ! | TACTTAATGGGATAATACTT+TGG | + | chr1_1:54060546-54060565 | Msa0028930:intron | 25.0% |
| !!! | TGTTGTTTGATTTGAAATAC+CGG | + | chr1_1:54060579-54060598 | Msa0028930:intron | 25.0% |
| !! | TGCTTGATATGTTTTTCATA+TGG | + | chr1_1:54060678-54060697 | Msa0028930:intron | 25.0% |
| !!! | TGCGCAAATTAATCTTTTTT+AGG | + | chr1_1:54060735-54060754 | Msa0028930:intron | 25.0% |
| !!! | GCGCAAATTAATCTTTTTTA+GGG | + | chr1_1:54060736-54060755 | Msa0028930:intron | 25.0% |
| !! | TACTTTCTAGAGAAAATAGA+CGG | - | chr1_1:54061227-54061246 | None:intergenic | 25.0% |
| !!! | TCTATTTTCTCTAGAAAGTA+TGG | + | chr1_1:54061227-54061246 | Msa0028930:CDS | 25.0% |
| !!! | AAACTGTTTTTGACATTTCT+GGG | + | chr1_1:54061477-54061496 | Msa0028930:CDS | 25.0% |
| ! | CATATCTTTGTAAAAGAGTT+TGG | - | chr1_1:54061563-54061582 | None:intergenic | 25.0% |
| !! | TGTTTCAGTAATAGAAGTTT+TGG | + | chr1_1:54061581-54061600 | Msa0028930:CDS | 25.0% |
| ! | AATTAAAGATCAACTGAAAG+AGG | + | chr1_1:54061643-54061662 | Msa0028930:CDS | 25.0% |
| !! | ATATTTTCTTCTGCATTAGA+AGG | + | chr1_1:54061725-54061744 | Msa0028930:CDS | 25.0% |
| ! | ATTCTCGGATAAATTTAACT+TGG | - | chr1_1:54062353-54062372 | None:intergenic | 25.0% |
| ! | TTCATCTTTCAATTCATTCT+CGG | - | chr1_1:54062368-54062387 | None:intergenic | 25.0% |
| ! | ATGAATCTTCTTAAATCTCA+AGG | - | chr1_1:54062702-54062721 | None:intergenic | 25.0% |
| ! | TGAGATTTAAGAAGATTCAT+AGG | + | chr1_1:54062702-54062721 | Msa0028930:exon | 25.0% |
| ! | ATGTCTATTGCAAACATAAT+TGG | - | chr1_1:54062767-54062786 | None:intergenic | 25.0% |
| !! | GTATGAATGGTAGAAATTTT+TGG | + | chr1_1:54062919-54062938 | Msa0028930:three_prime_UTR | 25.0% |
| ! | ACTGCACTTTATCTTTTTCT+AGG | + | chr1_1:54060155-54060174 | Msa0028930:intron | 30.0% |
| ! | CTGCACTTTATCTTTTTCTA+GGG | + | chr1_1:54060156-54060175 | Msa0028930:intron | 30.0% |
| ATTATCCCATTAAGTAGAGT+GGG | - | chr1_1:54060542-54060561 | None:intergenic | 30.0% | |
| TATTATCCCATTAAGTAGAG+TGG | - | chr1_1:54060543-54060562 | None:intergenic | 30.0% | |
| GTGACTATAAATTACAGATC+CGG | - | chr1_1:54060601-54060620 | None:intergenic | 30.0% | |
| ATCGCTATATATGCATATTG+TGG | + | chr1_1:54060924-54060943 | Msa0028930:intron | 30.0% | |
| !!! | GAAACTGTTTTTGACATTTC+TGG | + | chr1_1:54061476-54061495 | Msa0028930:CDS | 30.0% |
| !!! | AACTGTTTTTGACATTTCTG+GGG | + | chr1_1:54061478-54061497 | Msa0028930:CDS | 30.0% |
| !!! | CAGTAATAGAAGTTTTGGTT+TGG | + | chr1_1:54061586-54061605 | Msa0028930:CDS | 30.0% |
| ! | ATCTGTCAGATTTTATTGCT+GGG | + | chr1_1:54061669-54061688 | Msa0028930:CDS | 30.0% |
| !! | CCAAGTCATTTTGTGATTTA+AGG | - | chr1_1:54061823-54061842 | None:intergenic | 30.0% |
| CCTTAAATCACAAAATGACT+TGG | + | chr1_1:54061820-54061839 | Msa0028930:CDS | 30.0% | |
| ! | TAAATCACAAAATGACTTGG+AGG | + | chr1_1:54061823-54061842 | Msa0028930:CDS | 30.0% |
| !! | GAGCTTTATTTGATGAATGA+TGG | + | chr1_1:54061845-54061864 | Msa0028930:CDS | 30.0% |
| CATTTCCATAATAACATGAC+TGG | + | chr1_1:54061935-54061954 | Msa0028930:CDS | 30.0% | |
| ATATCCAAAATTTCCAGTGA+CGG | - | chr1_1:54062259-54062278 | None:intergenic | 30.0% | |
| GAGAATGAATTGAAAGATGA+AGG | + | chr1_1:54062367-54062386 | Msa0028930:CDS | 30.0% | |
| TGAGTACAAATTTGATCACA+TGG | + | chr1_1:54062446-54062465 | Msa0028930:CDS | 30.0% | |
| ATATTCAGCAACTTAAATCC+AGG | - | chr1_1:54062511-54062530 | None:intergenic | 30.0% | |
| ! | TGATTCTGATAATGATGACT+TGG | + | chr1_1:54062660-54062679 | Msa0028930:CDS | 30.0% |
| !! | GCTACTTCAGATTATTTTGT+AGG | + | chr1_1:54062741-54062760 | Msa0028930:three_prime_UTR | 30.0% |
| CAAAGTAGGTCAATTATACC+GGG | - | chr1_1:54059808-54059827 | None:intergenic | 35.0% | |
| CCAAAGTAGGTCAATTATAC+CGG | - | chr1_1:54059809-54059828 | None:intergenic | 35.0% | |
| TCTGTGTGAAAAACCAAAGT+AGG | - | chr1_1:54059822-54059841 | None:intergenic | 35.0% | |
| AGAAAATGGGTCAGTTATTC+CGG | + | chr1_1:54059991-54060010 | Msa0028930:intron | 35.0% | |
| AGAGAAGAGAAAGAAAAGAG+GGG | - | chr1_1:54060245-54060264 | None:intergenic | 35.0% | |
| CAGAGAAGAGAAAGAAAAGA+GGG | - | chr1_1:54060246-54060265 | None:intergenic | 35.0% | |
| CATAGGATTGTGGTCAAATA+GGG | + | chr1_1:54060465-54060484 | Msa0028930:intron | 35.0% | |
| ! | CCAGATTTTCGATATCAAAG+CGG | - | chr1_1:54060499-54060518 | None:intergenic | 35.0% |
| AGAGACCTTGTTCAAATCAA+GGG | - | chr1_1:54060654-54060673 | None:intergenic | 35.0% | |
| !!! | TGAGTCTTCTGCTGTTTTTT+AGG | + | chr1_1:54061018-54061037 | Msa0028930:intron | 35.0% |
| ! | GTTTCTAGGTTCTGTTGATA+TGG | + | chr1_1:54061091-54061110 | Msa0028930:intron | 35.0% |
| !! | TGATTGAAAGTGTTCGATGT+TGG | - | chr1_1:54061136-54061155 | None:intergenic | 35.0% |
| ! | GAACACTTTCAATCAAGTTG+TGG | + | chr1_1:54061141-54061160 | Msa0028930:CDS | 35.0% |
| GTTGATGTTAGTTGAACGAA+TGG | + | chr1_1:54061184-54061203 | Msa0028930:CDS | 35.0% | |
| TGGACTTCTTAACAAAGATG+AGG | + | chr1_1:54061247-54061266 | Msa0028930:CDS | 35.0% | |
| !!! | ATGTTGGAGGTTTTGAAAAG+AGG | + | chr1_1:54061395-54061414 | Msa0028930:CDS | 35.0% |
| !! | TTTTGAAAAGAGGACCAAGA+GGG | + | chr1_1:54061405-54061424 | Msa0028930:CDS | 35.0% |
| !!! | ACTGTTTTTGACATTTCTGG+GGG | + | chr1_1:54061479-54061498 | Msa0028930:CDS | 35.0% |
| !! | AGAGCTTCTAAAACCATTGA+TGG | + | chr1_1:54061535-54061554 | Msa0028930:CDS | 35.0% |
| !! | GAGCTTCTAAAACCATTGAT+GGG | + | chr1_1:54061536-54061555 | Msa0028930:CDS | 35.0% |
| ! | GATCTGTCAGATTTTATTGC+TGG | + | chr1_1:54061668-54061687 | Msa0028930:CDS | 35.0% |
| TAACCTGTCAAATAATGCCA+TGG | + | chr1_1:54061766-54061785 | Msa0028930:CDS | 35.0% | |
| AACCTGTCAAATAATGCCAT+GGG | + | chr1_1:54061767-54061786 | Msa0028930:CDS | 35.0% | |
| AAATAATGCCATGGGTGAAA+AGG | + | chr1_1:54061775-54061794 | Msa0028930:CDS | 35.0% | |
| AATAATGCCATGGGTGAAAA+GGG | + | chr1_1:54061776-54061795 | Msa0028930:CDS | 35.0% | |
| GATGAATGATGGTATATCAG+AGG | + | chr1_1:54061856-54061875 | Msa0028930:CDS | 35.0% | |
| TCTGTAAGATCAGCAAATAC+AGG | - | chr1_1:54062163-54062182 | None:intergenic | 35.0% | |
| CCTCTAAGTTCAAATAACTG+AGG | - | chr1_1:54062192-54062211 | None:intergenic | 35.0% | |
| CCTCAGTTATTTGAACTTAG+AGG | + | chr1_1:54062189-54062208 | Msa0028930:CDS | 35.0% | |
| TATTTGAACTTAGAGGACGA+TGG | + | chr1_1:54062196-54062215 | Msa0028930:CDS | 35.0% | |
| ! | TTCCTTCAAAGCATTAGCAA+GGG | - | chr1_1:54062230-54062249 | None:intergenic | 35.0% |
| ! | ATTCCTTCAAAGCATTAGCA+AGG | - | chr1_1:54062231-54062250 | None:intergenic | 35.0% |
| ! | GTCACTGGAAATTTTGGATA+TGG | + | chr1_1:54062258-54062277 | Msa0028930:CDS | 35.0% |
| ! | TGGAAATTTTGGATATGGCT+GGG | + | chr1_1:54062263-54062282 | Msa0028930:CDS | 35.0% |
| !! | CGGATAAATTTAACTTGGTG+AGG | - | chr1_1:54062348-54062367 | None:intergenic | 35.0% |
| AGGTGCAGGTTTAATTAGTA+AGG | + | chr1_1:54062387-54062406 | Msa0028930:CDS | 35.0% | |
| ACAAATTTGATCACATGGTC+TGG | + | chr1_1:54062451-54062470 | Msa0028930:CDS | 35.0% | |
| CCAACTTCATTTCTGATGAA+GGG | + | chr1_1:54062536-54062555 | Msa0028930:CDS | 35.0% | |
| ATATCTGGCAAGACAAGAAA+TGG | + | chr1_1:54062889-54062908 | Msa0028930:three_prime_UTR | 35.0% | |
| TATCTGGCAAGACAAGAAAT+GGG | + | chr1_1:54062890-54062909 | Msa0028930:three_prime_UTR | 35.0% | |
| AAATGGGCAAATGGTATGAA+TGG | + | chr1_1:54062906-54062925 | Msa0028930:three_prime_UTR | 35.0% | |
| ! | TGGTGGCGTTTAAAAAAAGC+TGG | + | chr1_1:54059660-54059679 | Msa0028930:intron | 40.0% |
| CCGGTATAATTGACCTACTT+TGG | + | chr1_1:54059806-54059825 | Msa0028930:intron | 40.0% | |
| GAAAATGGGTCAGTTATTCC+GGG | + | chr1_1:54059992-54060011 | Msa0028930:intron | 40.0% | |
| ! | TAGTTGGAGCCTTTTTATGC+TGG | - | chr1_1:54060082-54060101 | None:intergenic | 40.0% |
| GCAGAGAAGAGAAAGAAAAG+AGG | - | chr1_1:54060247-54060266 | None:intergenic | 40.0% | |
| CAAAGTAACTATGGCGCTAT+GGG | - | chr1_1:54060344-54060363 | None:intergenic | 40.0% | |
| ACAAAGTAACTATGGCGCTA+TGG | - | chr1_1:54060345-54060364 | None:intergenic | 40.0% | |
| GCATAGGATTGTGGTCAAAT+AGG | + | chr1_1:54060464-54060483 | Msa0028930:intron | 40.0% | |
| CCGCTTTGATATCGAAAATC+TGG | + | chr1_1:54060496-54060515 | Msa0028930:intron | 40.0% | |
| GAGACCTTGTTCAAATCAAG+GGG | - | chr1_1:54060653-54060672 | None:intergenic | 40.0% | |
| CAGAGACCTTGTTCAAATCA+AGG | - | chr1_1:54060655-54060674 | None:intergenic | 40.0% | |
| ! | CTTGATTTGAACAAGGTCTC+TGG | + | chr1_1:54060653-54060672 | Msa0028930:intron | 40.0% |
| CCTCAGATTAATCAGTCCTT+GGG | - | chr1_1:54060812-54060831 | None:intergenic | 40.0% | |
| CCAAGGACTGATTAATCTGA+GGG | + | chr1_1:54060810-54060829 | Msa0028930:intron | 40.0% | |
| CAAGGACTGATTAATCTGAG+GGG | + | chr1_1:54060811-54060830 | Msa0028930:intron | 40.0% | |
| !!! | TTCTGCTGTTTTTTAGGCAC+TGG | + | chr1_1:54061024-54061043 | Msa0028930:intron | 40.0% |
| ATCAACCTAGTACTCTGACT+TGG | - | chr1_1:54061170-54061189 | None:intergenic | 40.0% | |
| TGTTAGTTGAACGAATGGTC+AGG | + | chr1_1:54061189-54061208 | Msa0028930:CDS | 40.0% | |
| TAACAAAGATGAGGCTGAGA+AGG | + | chr1_1:54061256-54061275 | Msa0028930:CDS | 40.0% | |
| GAAGGATGCAAAGGAAATTG+AGG | + | chr1_1:54061274-54061293 | Msa0028930:CDS | 40.0% | |
| ! | TGCAACCCAACACTTTGAAA+AGG | + | chr1_1:54061313-54061332 | Msa0028930:CDS | 40.0% |
| !! | AGGCTCCTTTTCAAAGTGTT+GGG | - | chr1_1:54061321-54061340 | None:intergenic | 40.0% |
| TGCTGTGCAAATTTATGCCA+AGG | + | chr1_1:54061358-54061377 | Msa0028930:CDS | 40.0% | |
| CATAAGCTTACTCGATTCCT+TGG | - | chr1_1:54061378-54061397 | None:intergenic | 40.0% | |
| GGAATCGAGTAAGCTTATGT+TGG | + | chr1_1:54061379-54061398 | Msa0028930:CDS | 40.0% | |
| ATCGAGTAAGCTTATGTTGG+AGG | + | chr1_1:54061382-54061401 | Msa0028930:CDS | 40.0% | |
| !!! | GTTTTGAAAAGAGGACCAAG+AGG | + | chr1_1:54061404-54061423 | Msa0028930:CDS | 40.0% |
| !! | TGGGGAGTTGATATCTGAAA+AGG | + | chr1_1:54061439-54061458 | Msa0028930:CDS | 40.0% |
| !! | GGGGAGTTGATATCTGAAAA+GGG | + | chr1_1:54061440-54061459 | Msa0028930:CDS | 40.0% |
| GTCGCAGAGCTTTCATTAAT+GGG | + | chr1_1:54061501-54061520 | Msa0028930:CDS | 40.0% | |
| TCGCAGAGCTTTCATTAATG+GGG | + | chr1_1:54061502-54061521 | Msa0028930:CDS | 40.0% | |
| AAAGAGTTTGGTCCCATCAA+TGG | - | chr1_1:54061551-54061570 | None:intergenic | 40.0% | |
| ACTTCAATAGCTTCTGCTTC+TGG | - | chr1_1:54061698-54061717 | None:intergenic | 40.0% | |
| ATAATGCCATGGGTGAAAAG+GGG | + | chr1_1:54061777-54061796 | Msa0028930:CDS | 40.0% | |
| !! | TTTGTGATTTAAGGAGTGCC+CGG | - | chr1_1:54061814-54061833 | None:intergenic | 40.0% |
| AAGAACCTTAAGCTTCTCAG+TGG | - | chr1_1:54061915-54061934 | None:intergenic | 40.0% | |
| CGTCTCCAGTCATGTTATTA+TGG | - | chr1_1:54061943-54061962 | None:intergenic | 40.0% | |
| AATAACATGACTGGAGACGA+AGG | + | chr1_1:54061944-54061963 | Msa0028930:CDS | 40.0% | |
| ACCGAAAATCTTCCAAAGCT+GGG | - | chr1_1:54062003-54062022 | None:intergenic | 40.0% | |
| GATTTGCGTGACAACATGTT+TGG | + | chr1_1:54062103-54062122 | Msa0028930:CDS | 40.0% | |
| ! | CTGGAAATTTTGGATATGGC+TGG | + | chr1_1:54062262-54062281 | Msa0028930:CDS | 40.0% |
| ! | GAATTGAAAGATGAAGGTGC+AGG | + | chr1_1:54062373-54062392 | Msa0028930:CDS | 40.0% |
| AGGTTTAATTAGTAAGGCGC+TGG | + | chr1_1:54062393-54062412 | Msa0028930:CDS | 40.0% | |
| !! | TTAATTAGTAAGGCGCTGGA+AGG | + | chr1_1:54062397-54062416 | Msa0028930:CDS | 40.0% |
| GCAACTTAAATCCAGGTTTC+TGG | - | chr1_1:54062504-54062523 | None:intergenic | 40.0% | |
| GCCAACTTCATTTCTGATGA+AGG | + | chr1_1:54062535-54062554 | Msa0028930:CDS | 40.0% | |
| CCCTTCATCAGAAATGAAGT+TGG | - | chr1_1:54062539-54062558 | None:intergenic | 40.0% | |
| TAAAAACTCACCTGACATGC+TGG | + | chr1_1:54062582-54062601 | Msa0028930:CDS | 40.0% | |
| AAAAACTCACCTGACATGCT+GGG | + | chr1_1:54062583-54062602 | Msa0028930:CDS | 40.0% | |
| TCAGGATCATTCTCATCCAA+AGG | - | chr1_1:54062610-54062629 | None:intergenic | 40.0% | |
| TTGGATGAGAATGATCCTGA+AGG | + | chr1_1:54062610-54062629 | Msa0028930:CDS | 40.0% | |
| GACTTGGAGTCAAAACTGAA+AGG | + | chr1_1:54062676-54062695 | Msa0028930:CDS | 40.0% | |
| CAAGACAAGAAATGGGCAAA+TGG | + | chr1_1:54062897-54062916 | Msa0028930:three_prime_UTR | 40.0% | |
| TAAAGCGTGCGTGGAAAAAC+TGG | - | chr1_1:54059748-54059767 | None:intergenic | 45.0% | |
| CTTTATTACTACCTCCGTCC+CGG | + | chr1_1:54059787-54059806 | Msa0028930:intron | 45.0% | |
| GTAGGTCAATTATACCGGGA+CGG | - | chr1_1:54059804-54059823 | None:intergenic | 45.0% | |
| AAAATATACTCCCTCCGTCC+CGG | - | chr1_1:54060013-54060032 | None:intergenic | 45.0% | |
| TGCGTTCTCATTTCTCACTC+AGG | + | chr1_1:54060206-54060225 | Msa0028930:intron | 45.0% | |
| ATTGCGCCCACTCTACTTAA+TGG | + | chr1_1:54060533-54060552 | Msa0028930:intron | 45.0% | |
| TTGCGCCCACTCTACTTAAT+GGG | + | chr1_1:54060534-54060553 | Msa0028930:intron | 45.0% | |
| CCTTGTTCAAATCAAGGGGA+CGG | - | chr1_1:54060649-54060668 | None:intergenic | 45.0% | |
| AAACTTGGTATCCAGTCCCA+AGG | + | chr1_1:54060793-54060812 | Msa0028930:intron | 45.0% | |
| GATTAATCAGTCCTTGGGAC+TGG | - | chr1_1:54060807-54060826 | None:intergenic | 45.0% | |
| CCCAAGGACTGATTAATCTG+AGG | + | chr1_1:54060809-54060828 | Msa0028930:intron | 45.0% | |
| CCCTCAGATTAATCAGTCCT+TGG | - | chr1_1:54060813-54060832 | None:intergenic | 45.0% | |
| TCAAATGGGACAACCACAAG+TGG | - | chr1_1:54060851-54060870 | None:intergenic | 45.0% | |
| ! | CTCTTGCTCTGGCTTCAAAT+GGG | - | chr1_1:54060865-54060884 | None:intergenic | 45.0% |
| AGCAAGAGCAAAGCTCTGTA+TGG | + | chr1_1:54060877-54060896 | Msa0028930:intron | 45.0% | |
| !!! | CTGTTTTTTAGGCACTGGTG+AGG | + | chr1_1:54061029-54061048 | Msa0028930:intron | 45.0% |
| AGTGTTCGATGTTGGTACGA+CGG | - | chr1_1:54061128-54061147 | None:intergenic | 45.0% | |
| !! | AACCTAGTACTCTGACTTGG+AGG | - | chr1_1:54061167-54061186 | None:intergenic | 45.0% |
| AGAAAATAGACGGAGTCGTC+AGG | - | chr1_1:54061217-54061236 | None:intergenic | 45.0% | |
| ! | CAGGCTCCTTTTCAAAGTGT+TGG | - | chr1_1:54061322-54061341 | None:intergenic | 45.0% |
| ! | CACTTTGAAAAGGAGCCTGA+TGG | + | chr1_1:54061323-54061342 | Msa0028930:CDS | 45.0% |
| ! | AAAAGGAGCCTGATGGTGAT+GGG | + | chr1_1:54061330-54061349 | Msa0028930:CDS | 45.0% |
| GGTCGCAGAGCTTTCATTAA+TGG | + | chr1_1:54061500-54061519 | Msa0028930:CDS | 45.0% | |
| CAGAGCTTTCATTAATGGGG+AGG | + | chr1_1:54061505-54061524 | Msa0028930:CDS | 45.0% | |
| CACCCATGGCATTATTTGAC+AGG | - | chr1_1:54061772-54061791 | None:intergenic | 45.0% | |
| TAATGCCATGGGTGAAAAGG+GGG | + | chr1_1:54061778-54061797 | Msa0028930:CDS | 45.0% | |
| ! | AAAAGGGGGTTAGAGCATTC+CGG | + | chr1_1:54061792-54061811 | Msa0028930:CDS | 45.0% |
| CCTTAAGCTTCTCAGTGGAA+GGG | - | chr1_1:54061910-54061929 | None:intergenic | 45.0% | |
| ACCTTAAGCTTCTCAGTGGA+AGG | - | chr1_1:54061911-54061930 | None:intergenic | 45.0% | |
| CCGAAAATCTTCCAAAGCTG+GGG | - | chr1_1:54062002-54062021 | None:intergenic | 45.0% | |
| !!! | CCCCAGCTTTGGAAGATTTT+CGG | + | chr1_1:54061999-54062018 | Msa0028930:CDS | 45.0% |
| CACCGAAAATCTTCCAAAGC+TGG | - | chr1_1:54062004-54062023 | None:intergenic | 45.0% | |
| !! | AACATGTTTGGTGTGGAAGC+TGG | + | chr1_1:54062115-54062134 | Msa0028930:CDS | 45.0% |
| AGCCCTTGCTAATGCTTTGA+AGG | + | chr1_1:54062225-54062244 | Msa0028930:CDS | 45.0% | |
| ! | TGCACCGTCACTGGAAATTT+TGG | + | chr1_1:54062252-54062271 | Msa0028930:CDS | 45.0% |
| TGAGAATGATCCTGAAGGAG+AGG | + | chr1_1:54062615-54062634 | Msa0028930:CDS | 45.0% | |
| ATGGGTCAGTTATTCCGGGA+CGG | + | chr1_1:54059996-54060015 | Msa0028930:intron | 50.0% | |
| TTCCCCGCTCCAGCATAAAA+AGG | + | chr1_1:54060070-54060089 | Msa0028930:intron | 50.0% | |
| ! | AGCCTTTTTATGCTGGAGCG+GGG | - | chr1_1:54060075-54060094 | None:intergenic | 50.0% |
| ! | GAGCCTTTTTATGCTGGAGC+GGG | - | chr1_1:54060076-54060095 | None:intergenic | 50.0% |
| ! | GGAGCCTTTTTATGCTGGAG+CGG | - | chr1_1:54060077-54060096 | None:intergenic | 50.0% |
| ! | CCGTCCCCTTGATTTGAACA+AGG | + | chr1_1:54060646-54060665 | Msa0028930:intron | 50.0% |
| GACAACCACAAGTGGACAGT+GGG | - | chr1_1:54060843-54060862 | None:intergenic | 50.0% | |
| ! | GCTCTTGCTCTGGCTTCAAA+TGG | - | chr1_1:54060866-54060885 | None:intergenic | 50.0% |
| ACAGAGCTTTGCTCTTGCTC+TGG | - | chr1_1:54060876-54060895 | None:intergenic | 50.0% | |
| TGAGGCTGAGAAGGATGCAA+AGG | + | chr1_1:54061265-54061284 | Msa0028930:CDS | 50.0% | |
| ! | GAAAAGGAGCCTGATGGTGA+TGG | + | chr1_1:54061329-54061348 | Msa0028930:CDS | 50.0% |
| GAAAAGAGGACCAAGAGGGA+AGG | + | chr1_1:54061409-54061428 | Msa0028930:CDS | 50.0% | |
| CAAGAGGGAAGGAGGAGAAT+GGG | + | chr1_1:54061420-54061439 | Msa0028930:CDS | 50.0% | |
| AAGAGGGAAGGAGGAGAATG+GGG | + | chr1_1:54061421-54061440 | Msa0028930:CDS | 50.0% | |
| ! | TCTAACCCCCTTTTCACCCA+TGG | - | chr1_1:54061786-54061805 | None:intergenic | 50.0% |
| ! | AAAGGGGGTTAGAGCATTCC+GGG | + | chr1_1:54061793-54061812 | Msa0028930:CDS | 50.0% |
| CCCTTCCACTGAGAAGCTTA+AGG | + | chr1_1:54061907-54061926 | Msa0028930:CDS | 50.0% | |
| TGTGAAACGTTCCCCAGCTT+TGG | + | chr1_1:54061988-54062007 | Msa0028930:CDS | 50.0% | |
| CGGTGTTCATCTACCAGAGT+AGG | + | chr1_1:54062019-54062038 | Msa0028930:CDS | 50.0% | |
| ! | TCTACCAGAGTAGGCTCTGA+AGG | + | chr1_1:54062028-54062047 | Msa0028930:CDS | 50.0% |
| ! | TTGCTCTTGCTGAAGCGCTT+GGG | + | chr1_1:54062056-54062075 | Msa0028930:CDS | 50.0% |
| ! | GCGTGACAACATGTTTGGTG+TGG | + | chr1_1:54062108-54062127 | Msa0028930:CDS | 50.0% |
| AACAGCTTCTGCCAACAGCT+TGG | - | chr1_1:54062479-54062498 | None:intergenic | 50.0% | |
| GAAGCTGTTGTCCAGAAACC+TGG | + | chr1_1:54062490-54062509 | Msa0028930:CDS | 50.0% | |
| TCATCAACGTCCTCTCCTTC+AGG | - | chr1_1:54062628-54062647 | None:intergenic | 50.0% | |
| ! | AGGAGAGGACGTTGATGAAG+AGG | + | chr1_1:54062630-54062649 | Msa0028930:CDS | 50.0% |
| GCGTGCGTGGAAAAACTGGA+GGG | - | chr1_1:54059744-54059763 | None:intergenic | 55.0% | |
| AGCGTGCGTGGAAAAACTGG+AGG | - | chr1_1:54059745-54059764 | None:intergenic | 55.0% | |
| TGGATAGGGTAAAGCGTGCG+TGG | - | chr1_1:54059757-54059776 | None:intergenic | 55.0% | |
| GGTCAATTATACCGGGACGG+AGG | - | chr1_1:54059801-54059820 | None:intergenic | 55.0% | |
| GTCAGTTATTCCGGGACGGA+GGG | + | chr1_1:54060000-54060019 | Msa0028930:intron | 55.0% | |
| CCACAAGTGGACAGTGGGAT+TGG | - | chr1_1:54060838-54060857 | None:intergenic | 55.0% | |
| CCAATCCCACTGTCCACTTG+TGG | + | chr1_1:54060835-54060854 | Msa0028930:intron | 55.0% | |
| GGACAACCACAAGTGGACAG+TGG | - | chr1_1:54060844-54060863 | None:intergenic | 55.0% | |
| ! | GGCCTCCAAGTCAGAGTACT+AGG | + | chr1_1:54061162-54061181 | Msa0028930:CDS | 55.0% |
| GCAGAACTCCCATCACCATC+AGG | - | chr1_1:54061341-54061360 | None:intergenic | 55.0% | |
| AAGAGGACCAAGAGGGAAGG+AGG | + | chr1_1:54061412-54061431 | Msa0028930:CDS | 55.0% | |
| CCATTCTCCTCCTTCCCTCT+TGG | - | chr1_1:54061422-54061441 | None:intergenic | 55.0% | |
| CCAAGAGGGAAGGAGGAGAA+TGG | + | chr1_1:54061419-54061438 | Msa0028930:CDS | 55.0% | |
| !! | ACCAGAGTAGGCTCTGAAGG+TGG | + | chr1_1:54062031-54062050 | Msa0028930:CDS | 55.0% |
| ACCACCTTCAGAGCCTACTC+TGG | - | chr1_1:54062035-54062054 | None:intergenic | 55.0% | |
| ! | GTTGCTCTTGCTGAAGCGCT+TGG | + | chr1_1:54062055-54062074 | Msa0028930:CDS | 55.0% |
| ! | TGCTCTTGCTGAAGCGCTTG+GGG | + | chr1_1:54062057-54062076 | Msa0028930:CDS | 55.0% |
| GAAGGAATCTGCACCGTCAC+TGG | + | chr1_1:54062243-54062262 | Msa0028930:CDS | 55.0% | |
| ! | ATGGTCTGGAGCCAAGCTGT+TGG | + | chr1_1:54062465-54062484 | Msa0028930:CDS | 55.0% |
| ACCTGACATGCTGGGTCCTT+TGG | + | chr1_1:54062591-54062610 | Msa0028930:CDS | 55.0% | |
| TCCAAAGGACCCAGCATGTC+AGG | - | chr1_1:54062595-54062614 | None:intergenic | 55.0% | |
| GGTCAGTTATTCCGGGACGG+AGG | + | chr1_1:54059999-54060018 | Msa0028930:intron | 60.0% | |
| !! | AGTAAGGCGCTGGAAGGTCG+TGG | + | chr1_1:54062403-54062422 | Msa0028930:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 54059659 | 54062959 | 54059659 | ID=Msa0028930;Name=Msa0028930 |
| chr1_1 | mRNA | 54059659 | 54062959 | 54059659 | ID=Msa0028930-mRNA-1;Parent=Msa0028930;Name=Msa0028930-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0|0.25|0.25|1|1|4|248|544 |
| chr1_1 | exon | 54059659 | 54059666 | 54059659 | ID=Msa0028930-mRNA-1:exon:15936;Parent=Msa0028930-mRNA-1 |
| chr1_1 | exon | 54060348 | 54060354 | 54060348 | ID=Msa0028930-mRNA-1:exon:15937;Parent=Msa0028930-mRNA-1 |
| chr1_1 | exon | 54060470 | 54060476 | 54060470 | ID=Msa0028930-mRNA-1:exon:15938;Parent=Msa0028930-mRNA-1 |
| chr1_1 | exon | 54061099 | 54062959 | 54061099 | ID=Msa0028930-mRNA-1:exon:15939;Parent=Msa0028930-mRNA-1 |
| chr1_1 | CDS | 54059659 | 54059666 | 54059659 | ID=Msa0028930-mRNA-1:cds;Parent=Msa0028930-mRNA-1 |
| chr1_1 | CDS | 54060348 | 54060354 | 54060348 | ID=Msa0028930-mRNA-1:cds;Parent=Msa0028930-mRNA-1 |
| chr1_1 | CDS | 54060470 | 54060476 | 54060470 | ID=Msa0028930-mRNA-1:cds;Parent=Msa0028930-mRNA-1 |
| chr1_1 | CDS | 54061099 | 54062711 | 54061099 | ID=Msa0028930-mRNA-1:cds;Parent=Msa0028930-mRNA-1 |
| chr1_1 | three_prime_UTR | 54062712 | 54062959 | 54062712 | ID=Msa0028930-mRNA-1:three_prime_utr;Parent=Msa0028930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
