Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0124450 | sp|Q9LE82|RAGP1_ARATH | 68.911 | 505 | 150 | 3 | 6 | 509 | 1 | 499 | 0.0 | 704 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0124450 | Q9SBS1 | 97.936 | 533 | 11 | 0 | 6 | 538 | 1 | 533 | 0.0 | 1050 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002560 | Msa0124450 | 0.827675 | 1.372544e-54 | -8.615850e-47 |
| Msa0007850 | Msa0124450 | 0.809527 | 1.810468e-50 | -8.615850e-47 |
| Msa0008200 | Msa0124450 | 0.823379 | 1.429943e-53 | -8.615850e-47 |
| Msa0010490 | Msa0124450 | 0.814844 | 1.252353e-51 | -8.615850e-47 |
| Msa0012930 | Msa0124450 | 0.807788 | 4.259672e-50 | -8.615850e-47 |
| Msa0017390 | Msa0124450 | 0.844188 | 8.827029e-59 | -8.615850e-47 |
| Msa0020390 | Msa0124450 | 0.823357 | 1.446801e-53 | -8.615850e-47 |
| Msa0020410 | Msa0124450 | 0.809721 | 1.644815e-50 | -8.615850e-47 |
| Msa0028930 | Msa0124450 | 0.948564 | 7.350314e-107 | -8.615850e-47 |
| Msa0029260 | Msa0124450 | 0.807153 | 5.808229e-50 | -8.615850e-47 |
| Msa0033880 | Msa0124450 | 0.817229 | 3.675073e-52 | -8.615850e-47 |
| Msa0035130 | Msa0124450 | 0.826399 | 2.771480e-54 | -8.615850e-47 |
| Msa0037160 | Msa0124450 | 0.805439 | 1.334013e-49 | -8.615850e-47 |
| Msa0041690 | Msa0124450 | 0.805159 | 1.526808e-49 | -8.615850e-47 |
| Msa0045340 | Msa0124450 | 0.801869 | 7.344088e-49 | -8.615850e-47 |
| Msa0047160 | Msa0124450 | 0.828847 | 7.159181e-55 | -8.615850e-47 |
| Msa0048180 | Msa0124450 | 0.820793 | 5.684540e-53 | -8.615850e-47 |
| Msa0054820 | Msa0124450 | 0.800118 | 1.674473e-48 | -8.615850e-47 |
| Msa0065550 | Msa0124450 | 0.831670 | 1.463600e-55 | -8.615850e-47 |
| Msa0071250 | Msa0124450 | 0.806746 | 7.080855e-50 | -8.615850e-47 |
| Msa0077900 | Msa0124450 | 0.803105 | 4.085113e-49 | -8.615850e-47 |
| Msa0080830 | Msa0124450 | 0.801330 | 9.472640e-49 | -8.615850e-47 |
| Msa0081210 | Msa0124450 | 0.804252 | 2.361775e-49 | -8.615850e-47 |
| Msa0081650 | Msa0124450 | 0.820519 | 6.573145e-53 | -8.615850e-47 |
| Msa0090520 | Msa0124450 | 0.828836 | 7.204732e-55 | -8.615850e-47 |
| Msa0090550 | Msa0124450 | 0.815563 | 8.672664e-52 | -8.615850e-47 |
| Msa0094470 | Msa0124450 | 0.810735 | 9.943878e-51 | -8.615850e-47 |
| Msa0097590 | Msa0124450 | 0.802187 | 6.318758e-49 | -8.615850e-47 |
| Msa0097610 | Msa0124450 | 0.802792 | 4.741915e-49 | -8.615850e-47 |
| Msa0103250 | Msa0124450 | 0.824044 | 9.991788e-54 | -8.615850e-47 |
| Msa0104120 | Msa0124450 | 0.809843 | 1.548349e-50 | -8.615850e-47 |
| Msa0104670 | Msa0124450 | 0.800429 | 1.447284e-48 | -8.615850e-47 |
| Msa0105520 | Msa0124450 | 0.806550 | 7.789593e-50 | -8.615850e-47 |
| Msa0106620 | Msa0124450 | 0.859851 | 3.106018e-63 | -8.615850e-47 |
| Msa0106710 | Msa0124450 | 0.851900 | 6.563660e-61 | -8.615850e-47 |
| Msa0115400 | Msa0124450 | 0.809409 | 1.919572e-50 | -8.615850e-47 |
| Msa0119900 | Msa0124450 | 0.800890 | 1.165584e-48 | -8.615850e-47 |
| Msa0124450 | Msa0127100 | 0.942693 | 4.566503e-102 | -8.615850e-47 |
| Msa0124450 | Msa0127850 | 0.810459 | 1.140518e-50 | -8.615850e-47 |
| Msa0124450 | Msa0131330 | 0.817122 | 3.883603e-52 | -8.615850e-47 |
| Msa0124450 | Msa0136120 | 0.817168 | 3.791938e-52 | -8.615850e-47 |
| Msa0124450 | Msa0137990 | 0.827104 | 1.880886e-54 | -8.615850e-47 |
| Msa0124450 | Msa0138750 | 0.820330 | 7.262947e-53 | -8.615850e-47 |
| Msa0124450 | Msa0139670 | 0.804269 | 2.342523e-49 | -8.615850e-47 |
| Msa0124450 | Msa0148080 | 0.804828 | 1.790812e-49 | -8.615850e-47 |
| Msa0124450 | Msa0149440 | 0.835162 | 1.969802e-56 | -8.615850e-47 |
| Msa0124450 | Msa0168870 | 0.823525 | 1.321785e-53 | -8.615850e-47 |
| Msa0124450 | Msa0169300 | 0.805036 | 1.620355e-49 | -8.615850e-47 |
| Msa0124450 | Msa0174000 | 0.801503 | 8.730812e-49 | -8.615850e-47 |
| Msa0124450 | Msa0179190 | 0.803036 | 4.222108e-49 | -8.615850e-47 |
| Msa0124450 | Msa0183870 | 0.802491 | 5.471531e-49 | -8.615850e-47 |
| Msa0124450 | Msa0183900 | 0.820251 | 7.569437e-53 | -8.615850e-47 |
| Msa0124450 | Msa0188350 | 0.834456 | 2.966222e-56 | -8.615850e-47 |
| Msa0124450 | Msa0189300 | 0.812665 | 3.782553e-51 | -8.615850e-47 |
| Msa0124450 | Msa0192480 | 0.824760 | 6.776785e-54 | -8.615850e-47 |
| Msa0124450 | Msa0192640 | 0.817521 | 3.158526e-52 | -8.615850e-47 |
| Msa0124450 | Msa0197610 | 0.814854 | 1.246492e-51 | -8.615850e-47 |
| Msa0124450 | Msa0199940 | 0.809291 | 2.035168e-50 | -8.615850e-47 |
| Msa0124450 | Msa0202410 | 0.845337 | 4.323904e-59 | -8.615850e-47 |
| Msa0124450 | Msa0204960 | 0.829121 | 6.146389e-55 | -8.615850e-47 |
| Msa0124450 | Msa0205010 | 0.848607 | 5.503148e-60 | -8.615850e-47 |
| Msa0124450 | Msa0206690 | 0.821486 | 3.935879e-53 | -8.615850e-47 |
| Msa0124450 | Msa0207350 | 0.800153 | 1.647548e-48 | -8.615850e-47 |
| Msa0124450 | Msa0214550 | 0.815083 | 1.108613e-51 | -8.615850e-47 |
| Msa0124450 | Msa0217700 | 0.813312 | 2.728628e-51 | -8.615850e-47 |
| Msa0124450 | Msa0220730 | 0.817181 | 3.767292e-52 | -8.615850e-47 |
| Msa0124450 | Msa0223080 | 0.829073 | 6.312794e-55 | -8.615850e-47 |
| Msa0124450 | Msa0223230 | 0.833340 | 5.642159e-56 | -8.615850e-47 |
| Msa0124450 | Msa0223330 | 0.809942 | 1.474696e-50 | -8.615850e-47 |
| Msa0124450 | Msa0231100 | 0.810153 | 1.327781e-50 | -8.615850e-47 |
| Msa0124450 | Msa0231190 | 0.812464 | 4.183695e-51 | -8.615850e-47 |
| Msa0124450 | Msa0233370 | 0.840714 | 7.362773e-58 | -8.615850e-47 |
| Msa0124450 | Msa0237200 | 0.830439 | 2.934550e-55 | -8.615850e-47 |
| Msa0124450 | Msa0237210 | 0.849987 | 2.271261e-60 | -8.615850e-47 |
| Msa0124450 | Msa0240900 | 0.837694 | 4.469236e-57 | -8.615850e-47 |
| Msa0124450 | Msa0241140 | 0.831237 | 1.871011e-55 | -8.615850e-47 |
| Msa0124450 | Msa0241830 | 0.838943 | 2.129155e-57 | -8.615850e-47 |
| Msa0124450 | Msa0244970 | 0.815411 | 9.371033e-52 | -8.615850e-47 |
| Msa0124450 | Msa0244980 | 0.836679 | 8.125929e-57 | -8.615850e-47 |
| Msa0124450 | Msa0249580 | 0.823097 | 1.663909e-53 | -8.615850e-47 |
| Msa0124450 | Msa0256480 | 0.810250 | 1.265372e-50 | -8.615850e-47 |
| Msa0124450 | Msa0257490 | 0.815225 | 1.030927e-51 | -8.615850e-47 |
| Msa0124450 | Msa0262480 | 0.809813 | 1.571614e-50 | -8.615850e-47 |
| Msa0124450 | Msa0274970 | 0.832381 | 9.763103e-56 | -8.615850e-47 |
| Msa0124450 | Msa0274980 | 0.824108 | 9.649582e-54 | -8.615850e-47 |
| Msa0124450 | Msa0275360 | 0.827254 | 1.731832e-54 | -8.615850e-47 |
| Msa0124450 | Msa0278570 | 0.805925 | 1.055031e-49 | -8.615850e-47 |
| Msa0124450 | Msa0279850 | 0.825563 | 4.379296e-54 | -8.615850e-47 |
| Msa0124450 | Msa0281530 | 0.840216 | 9.935020e-58 | -8.615850e-47 |
| Msa0124450 | Msa0283420 | 0.812995 | 3.202625e-51 | -8.615850e-47 |
| Msa0124450 | Msa0295460 | -0.831148 | 1.966718e-55 | -8.615850e-47 |
| Msa0124450 | Msa0296250 | 0.827665 | 1.380213e-54 | -8.615850e-47 |
| Msa0124450 | Msa0296790 | 0.824211 | 9.125443e-54 | -8.615850e-47 |
| Msa0124450 | Msa0296820 | 0.810317 | 1.224108e-50 | -8.615850e-47 |
| Msa0124450 | Msa0302160 | 0.833971 | 3.924974e-56 | -8.615850e-47 |
| Msa0124450 | Msa0307850 | 0.800668 | 1.293562e-48 | -8.615850e-47 |
| Msa0124450 | Msa0308440 | 0.809284 | 2.041506e-50 | -8.615850e-47 |
| Msa0124450 | Msa0315680 | 0.832791 | 7.728038e-56 | -8.615850e-47 |
| Msa0124450 | Msa0315690 | 0.846893 | 1.631482e-59 | -8.615850e-47 |
| Msa0124450 | Msa0317970 | 0.858693 | 6.915545e-63 | -8.615850e-47 |
| Msa0124450 | Msa0320590 | 0.834627 | 2.686781e-56 | -8.615850e-47 |
| Msa0124450 | Msa0321690 | 0.846976 | 1.548205e-59 | -8.615850e-47 |
| Msa0124450 | Msa0322240 | 0.835101 | 2.041691e-56 | -8.615850e-47 |
| Msa0124450 | Msa0322900 | 0.848303 | 6.677451e-60 | -8.615850e-47 |
| Msa0124450 | Msa0323260 | 0.808748 | 2.659598e-50 | -8.615850e-47 |
| Msa0124450 | Msa0324240 | 0.813282 | 2.770133e-51 | -8.615850e-47 |
| Msa0124450 | Msa0326480 | 0.838662 | 2.516735e-57 | -8.615850e-47 |
| Msa0124450 | Msa0339490 | 0.836242 | 1.049798e-56 | -8.615850e-47 |
| Msa0124450 | Msa0341690 | 0.821705 | 3.502920e-53 | -8.615850e-47 |
| Msa0124450 | Msa0341840 | 0.800603 | 1.333963e-48 | -8.615850e-47 |
| Msa0124450 | Msa0357900 | 0.837148 | 6.165086e-57 | -8.615850e-47 |
| Msa0124450 | Msa0358890 | 0.800784 | 1.224948e-48 | -8.615850e-47 |
| Msa0124450 | Msa0360210 | 0.811141 | 8.122287e-51 | -8.615850e-47 |
| Msa0124450 | Msa0363060 | 0.811257 | 7.665642e-51 | -8.615850e-47 |
| Msa0124450 | Msa0365860 | 0.802303 | 5.980387e-49 | -8.615850e-47 |
| Msa0124450 | Msa0372810 | 0.831958 | 1.242871e-55 | -8.615850e-47 |
| Msa0124450 | Msa0376020 | 0.834567 | 2.782451e-56 | -8.615850e-47 |
| Msa0124450 | Msa0377450 | 0.833772 | 4.402156e-56 | -8.615850e-47 |
| Msa0124450 | Msa0378970 | 0.857681 | 1.382670e-62 | -8.615850e-47 |
| Msa0124450 | Msa0382370 | 0.820468 | 6.750492e-53 | -8.615850e-47 |
| Msa0124450 | Msa0389910 | 0.836640 | 8.314260e-57 | -8.615850e-47 |
| Msa0124450 | Msa0392270 | 0.804278 | 2.332642e-49 | -8.615850e-47 |
| Msa0124450 | Msa0395980 | 0.808608 | 2.848958e-50 | -8.615850e-47 |
| Msa0124450 | Msa0403500 | 0.806674 | 7.335735e-50 | -8.615850e-47 |
| Msa0124450 | Msa0403770 | 0.805100 | 1.570987e-49 | -8.615850e-47 |
| Msa0124450 | Msa0406770 | 0.805748 | 1.149380e-49 | -8.615850e-47 |
| Msa0124450 | Msa0408300 | 0.806725 | 7.153693e-50 | -8.615850e-47 |
| Msa0124450 | Msa0419720 | 0.872309 | 3.510001e-67 | -8.615850e-47 |
| Msa0124450 | Msa0428050 | 0.802814 | 4.692556e-49 | -8.615850e-47 |
| Msa0124450 | Msa0428580 | 0.835074 | 2.073288e-56 | -8.615850e-47 |
| Msa0124450 | Msa0432160 | 0.811420 | 7.063329e-51 | -8.615850e-47 |
| Msa0124450 | Msa0437020 | 0.846477 | 2.119088e-59 | -8.615850e-47 |
| Msa0124450 | Msa0450400 | -0.830187 | 3.381334e-55 | -8.615850e-47 |
| Msa0124450 | Msa0450480 | 0.837306 | 5.619030e-57 | -8.615850e-47 |
| Msa0124450 | Msa0456880 | 0.816593 | 5.105610e-52 | -8.615850e-47 |
| Msa0124450 | Msa0474940 | 0.837043 | 6.561175e-57 | -8.615850e-47 |
| Msa0124450 | Msa0476680 | 0.816039 | 6.792036e-52 | -8.615850e-47 |
| Msa0124450 | Msa0480780 | 0.838452 | 2.851922e-57 | -8.615850e-47 |
| Msa0124450 | Msa0481280 | 0.807322 | 5.349191e-50 | -8.615850e-47 |
| Msa0124450 | Msa0481970 | 0.836590 | 8.560249e-57 | -8.615850e-47 |
| Msa0124450 | Msa0491000 | 0.824604 | 7.376038e-54 | -8.615850e-47 |
| Msa0124450 | Msa0510930 | 0.823786 | 1.148331e-53 | -8.615850e-47 |
| Msa0124450 | Msa0511770 | 0.840284 | 9.538017e-58 | -8.615850e-47 |
| Msa0124450 | Msa0513260 | 0.812783 | 3.564189e-51 | -8.615850e-47 |
| Msa0124450 | Msa0516020 | 0.833777 | 4.388880e-56 | -8.615850e-47 |
| Msa0124450 | Msa0517640 | 0.854090 | 1.550901e-61 | -8.615850e-47 |
| Msa0124450 | Msa0518030 | 0.825301 | 5.051582e-54 | -8.615850e-47 |
| Msa0124450 | Msa0521010 | 0.816409 | 5.613371e-52 | -8.615850e-47 |
| Msa0124450 | Msa0521670 | 0.810939 | 8.981337e-51 | -8.615850e-47 |
| Msa0124450 | Msa0523050 | 0.820345 | 7.205225e-53 | -8.615850e-47 |
| Msa0124450 | Msa0526020 | 0.801968 | 7.009360e-49 | -8.615850e-47 |
| Msa0124450 | Msa0527020 | 0.808369 | 3.204483e-50 | -8.615850e-47 |
| Msa0124450 | Msa0531250 | 0.849005 | 4.267673e-60 | -8.615850e-47 |
| Msa0124450 | Msa0531650 | 0.809583 | 1.761525e-50 | -8.615850e-47 |
| Msa0124450 | Msa0532960 | 0.823255 | 1.528419e-53 | -8.615850e-47 |
| Msa0124450 | Msa0542490 | 0.808904 | 2.462740e-50 | -8.615850e-47 |
| Msa0124450 | Msa0547160 | 0.803653 | 3.145598e-49 | -8.615850e-47 |
| Msa0124450 | Msa0547990 | 0.839535 | 1.495106e-57 | -8.615850e-47 |
| Msa0124450 | Msa0554290 | 0.834663 | 2.631176e-56 | -8.615850e-47 |
| Msa0124450 | Msa0560500 | 0.841841 | 3.719923e-58 | -8.615850e-47 |
| Msa0124450 | Msa0569780 | 0.805887 | 1.074706e-49 | -8.615850e-47 |
| Msa0124450 | Msa0581110 | 0.800532 | 1.378866e-48 | -8.615850e-47 |
| Msa0124450 | Msa0581280 | 0.848442 | 6.112507e-60 | -8.615850e-47 |
| Msa0124450 | Msa0588090 | 0.857528 | 1.535429e-62 | -8.615850e-47 |
| Msa0124450 | Msa0593700 | 0.807986 | 3.866550e-50 | -8.615850e-47 |
| Msa0124450 | Msa0600080 | 0.817731 | 2.832657e-52 | -8.615850e-47 |
| Msa0124450 | Msa0614510 | 0.801850 | 7.413083e-49 | -8.615850e-47 |
| Msa0124450 | Msa0615580 | 0.809049 | 2.293071e-50 | -8.615850e-47 |
| Msa0124450 | Msa0616450 | 0.801363 | 9.327662e-49 | -8.615850e-47 |
| Msa0124450 | Msa0617170 | 0.841317 | 5.112636e-58 | -8.615850e-47 |
| Msa0124450 | Msa0618950 | 0.819491 | 1.129608e-52 | -8.615850e-47 |
| Msa0124450 | Msa0618970 | 0.807112 | 5.927121e-50 | -8.615850e-47 |
| Msa0124450 | Msa0619200 | 0.803310 | 3.706060e-49 | -8.615850e-47 |
| Msa0124450 | Msa0620230 | 0.800871 | 1.175985e-48 | -8.615850e-47 |
| Msa0124450 | Msa0623990 | 0.803735 | 3.024911e-49 | -8.615850e-47 |
| Msa0124450 | Msa0624060 | 0.815459 | 9.144074e-52 | -8.615850e-47 |
| Msa0124450 | Msa0628420 | 0.849075 | 4.079339e-60 | -8.615850e-47 |
| Msa0124450 | Msa0644030 | 0.831024 | 2.110387e-55 | -8.615850e-47 |
| Msa0124450 | Msa0652690 | 0.834983 | 2.185338e-56 | -8.615850e-47 |
| Msa0124450 | Msa0658590 | 0.814501 | 1.492345e-51 | -8.615850e-47 |
| Msa0124450 | Msa0666230 | 0.823733 | 1.181734e-53 | -8.615850e-47 |
| Msa0124450 | Msa0672100 | 0.800692 | 1.279103e-48 | -8.615850e-47 |
| Msa0124450 | Msa0672550 | 0.845170 | 4.799355e-59 | -8.615850e-47 |
| Msa0124450 | Msa0676130 | 0.805872 | 1.082097e-49 | -8.615850e-47 |
| Msa0124450 | Msa0676180 | 0.801200 | 1.007418e-48 | -8.615850e-47 |
| Msa0124450 | Msa0689440 | 0.837417 | 5.263566e-57 | -8.615850e-47 |
| Msa0124450 | Msa0691290 | 0.830431 | 2.947954e-55 | -8.615850e-47 |
| Msa0124450 | Msa0695130 | 0.814053 | 1.874309e-51 | -8.615850e-47 |
| Msa0124450 | Msa0704890 | 0.826756 | 2.278544e-54 | -8.615850e-47 |
| Msa0124450 | Msa0705390 | 0.815229 | 1.028936e-51 | -8.615850e-47 |
| Msa0124450 | Msa0705990 | 0.840702 | 7.417682e-58 | -8.615850e-47 |
| Msa0124450 | Msa0709120 | 0.803580 | 3.257297e-49 | -8.615850e-47 |
| Msa0124450 | Msa0712560 | 0.832597 | 8.633914e-56 | -8.615850e-47 |
| Msa0124450 | Msa0721280 | 0.822275 | 2.583878e-53 | -8.615850e-47 |
| Msa0124450 | Msa0723550 | 0.809619 | 1.730584e-50 | -8.615850e-47 |
| Msa0124450 | Msa0748920 | 0.812553 | 4.001663e-51 | -8.615850e-47 |
| Msa0124450 | Msa0752700 | 0.816662 | 4.926337e-52 | -8.615850e-47 |
| Msa0124450 | Msa0763990 | 0.803350 | 3.635238e-49 | -8.615850e-47 |
| Msa0124450 | Msa0764010 | 0.803661 | 3.133938e-49 | -8.615850e-47 |
| Msa0124450 | Msa0780930 | 0.808835 | 2.548213e-50 | -8.615850e-47 |
| Msa0124450 | Msa0783860 | 0.805837 | 1.100722e-49 | -8.615850e-47 |
| Msa0124450 | Msa0786750 | 0.800404 | 1.464523e-48 | -8.615850e-47 |
| Msa0124450 | Msa0791090 | 0.813372 | 2.645950e-51 | -8.615850e-47 |
| Msa0124450 | Msa0794970 | 0.822660 | 2.103783e-53 | -8.615850e-47 |
| Msa0124450 | Msa0798290 | 0.800768 | 1.234486e-48 | -8.615850e-47 |
| Msa0124450 | Msa0800370 | 0.825850 | 3.743676e-54 | -8.615850e-47 |
| Msa0124450 | Msa0818770 | 0.818123 | 2.309827e-52 | -8.615850e-47 |
| Msa0124450 | Msa0822500 | 0.819889 | 9.163070e-53 | -8.615850e-47 |
| Msa0124450 | Msa0831100 | 0.839176 | 1.852880e-57 | -8.615850e-47 |
| Msa0124450 | Msa0833190 | -0.825668 | 4.133587e-54 | -8.615850e-47 |
| Msa0124450 | Msa0880450 | 0.802913 | 4.477546e-49 | -8.615850e-47 |
| Msa0124450 | Msa0890550 | 0.803825 | 2.897038e-49 | -8.615850e-47 |
| Msa0124450 | Msa0892640 | 0.816186 | 6.296233e-52 | -8.615850e-47 |
| Msa0124450 | Msa0894400 | 0.818258 | 2.153219e-52 | -8.615850e-47 |
| Msa0124450 | Msa0897200 | 0.805759 | 1.143217e-49 | -8.615850e-47 |
| Msa0124450 | Msa0901110 | 0.804400 | 2.199468e-49 | -8.615850e-47 |
| Msa0124450 | Msa0921000 | 0.820017 | 8.563596e-53 | -8.615850e-47 |
| Msa0124450 | Msa0923780 | 0.818190 | 2.230870e-52 | -8.615850e-47 |
| Msa0124450 | Msa0933760 | 0.811196 | 7.901971e-51 | -8.615850e-47 |
| Msa0124450 | Msa0934140 | 0.846390 | 2.238639e-59 | -8.615850e-47 |
| Msa0124450 | Msa0944200 | 0.811257 | 7.665642e-51 | -8.615850e-47 |
| Msa0124450 | Msa0945240 | 0.839658 | 1.388911e-57 | -8.615850e-47 |
| Msa0124450 | Msa0959520 | 0.809900 | 1.505388e-50 | -8.615850e-47 |
| Msa0124450 | Msa0962840 | 0.802084 | 6.635733e-49 | -8.615850e-47 |
| Msa0124450 | Msa0970530 | 0.804304 | 2.303243e-49 | -8.615850e-47 |
| Msa0124450 | Msa0970600 | 0.807579 | 4.718308e-50 | -8.615850e-47 |
| Msa0124450 | Msa0971650 | 0.806040 | 9.976445e-50 | -8.615850e-47 |
| Msa0124450 | Msa0974950 | 0.817885 | 2.614425e-52 | -8.615850e-47 |
| Msa0124450 | Msa0997430 | 0.812230 | 4.706692e-51 | -8.615850e-47 |
| Msa0124450 | Msa1006840 | 0.834142 | 3.555809e-56 | -8.615850e-47 |
| Msa0124450 | Msa1012740 | 0.814899 | 1.217970e-51 | -8.615850e-47 |
| Msa0124450 | Msa1021520 | 0.802355 | 5.836250e-49 | -8.615850e-47 |
| Msa0124450 | Msa1024680 | 0.833524 | 5.075115e-56 | -8.615850e-47 |
| Msa0124450 | Msa1027250 | 0.811751 | 5.984183e-51 | -8.615850e-47 |
| Msa0124450 | Msa1027300 | 0.809172 | 2.157637e-50 | -8.615850e-47 |
| Msa0124450 | Msa1027360 | 0.802569 | 5.272427e-49 | -8.615850e-47 |
| Msa0124450 | Msa1029070 | 0.822239 | 2.634715e-53 | -8.615850e-47 |
| Msa0124450 | Msa1034500 | 0.839073 | 1.970667e-57 | -8.615850e-47 |
| Msa0124450 | Msa1051330 | 0.810936 | 8.993964e-51 | -8.615850e-47 |
| Msa0124450 | Msa1063420 | 0.842294 | 2.823115e-58 | -8.615850e-47 |
| Msa0124450 | Msa1070390 | 0.809002 | 2.346360e-50 | -8.615850e-47 |
| Msa0124450 | Msa1071050 | 0.856153 | 3.899122e-62 | -8.615850e-47 |
| Msa0124450 | Msa1072710 | 0.824949 | 6.115887e-54 | -8.615850e-47 |
| Msa0124450 | Msa1078170 | 0.809014 | 2.332530e-50 | -8.615850e-47 |
| Msa0124450 | Msa1080640 | 0.800918 | 1.150494e-48 | -8.615850e-47 |
| Msa0124450 | Msa1089320 | 0.835423 | 1.692727e-56 | -8.615850e-47 |
| Msa0124450 | Msa1089450 | 0.853215 | 2.768113e-61 | -8.615850e-47 |
| Msa0124450 | Msa1093840 | 0.802735 | 4.872060e-49 | -8.615850e-47 |
| Msa0124450 | Msa1095620 | 0.808102 | 3.651788e-50 | -8.615850e-47 |
| Msa0124450 | Msa1098890 | 0.809450 | 1.881277e-50 | -8.615850e-47 |
| Msa0124450 | Msa1108710 | 0.803615 | 3.203220e-49 | -8.615850e-47 |
| Msa0124450 | Msa1109680 | 0.800613 | 1.327652e-48 | -8.615850e-47 |
| Msa0124450 | Msa1118450 | 0.838643 | 2.545177e-57 | -8.615850e-47 |
| Msa0124450 | Msa1123350 | 0.816661 | 4.929540e-52 | -8.615850e-47 |
| Msa0124450 | Msa1123380 | 0.810421 | 1.162530e-50 | -8.615850e-47 |
| Msa0124450 | Msa1123770 | 0.838923 | 2.154880e-57 | -8.615850e-47 |
| Msa0124450 | Msa1126450 | 0.805528 | 1.278414e-49 | -8.615850e-47 |
| Msa0124450 | Msa1127590 | 0.838040 | 3.641132e-57 | -8.615850e-47 |
| Msa0124450 | Msa1133400 | 0.824890 | 6.315805e-54 | -8.615850e-47 |
| Msa0124450 | Msa1135890 | 0.832162 | 1.106182e-55 | -8.615850e-47 |
| Msa0124450 | Msa1144040 | 0.802424 | 5.647609e-49 | -8.615850e-47 |
| Msa0124450 | Msa1145240 | 0.822923 | 1.826894e-53 | -8.615850e-47 |
| Msa0124450 | Msa1145810 | 0.800069 | 1.713423e-48 | -8.615850e-47 |
| Msa0124450 | Msa1156160 | 0.820715 | 5.924420e-53 | -8.615850e-47 |
| Msa0124450 | Msa1158230 | 0.834436 | 3.001440e-56 | -8.615850e-47 |
| Msa0124450 | Msa1160590 | 0.802082 | 6.640024e-49 | -8.615850e-47 |
| Msa0124450 | Msa1163730 | 0.803426 | 3.505180e-49 | -8.615850e-47 |
| Msa0124450 | Msa1165780 | 0.807783 | 4.270187e-50 | -8.615850e-47 |
| Msa0124450 | Msa1169910 | 0.837135 | 6.215578e-57 | -8.615850e-47 |
| Msa0124450 | Msa1175200 | 0.803012 | 4.270480e-49 | -8.615850e-47 |
| Msa0124450 | Msa1193290 | 0.802539 | 5.348725e-49 | -8.615850e-47 |
| Msa0124450 | Msa1201640 | 0.811396 | 7.148350e-51 | -8.615850e-47 |
| Msa0124450 | Msa1202580 | 0.821838 | 3.263768e-53 | -8.615850e-47 |
| Msa0124450 | Msa1206270 | 0.805172 | 1.517568e-49 | -8.615850e-47 |
| Msa0124450 | Msa1206310 | 0.816884 | 4.393963e-52 | -8.615850e-47 |
| Msa0124450 | Msa1206360 | 0.824834 | 6.510759e-54 | -8.615850e-47 |
| Msa0124450 | Msa1206650 | 0.807612 | 4.643379e-50 | -8.615850e-47 |
| Msa0124450 | Msa1209200 | 0.840722 | 7.326440e-58 | -8.615850e-47 |
| Msa0124450 | Msa1216260 | 0.823555 | 1.300619e-53 | -8.615850e-47 |
| Msa0124450 | Msa1218450 | 0.854082 | 1.559261e-61 | -8.615850e-47 |
| Msa0124450 | Msa1219000 | 0.818231 | 2.183658e-52 | -8.615850e-47 |
| Msa0124450 | Msa1221060 | 0.800554 | 1.364595e-48 | -8.615850e-47 |
| Msa0124450 | Msa1225860 | -0.801104 | 1.053873e-48 | -8.615850e-47 |
| Msa0124450 | Msa1226270 | 0.809818 | 1.567884e-50 | -8.615850e-47 |
| Msa0124450 | Msa1226470 | 0.824768 | 6.750399e-54 | -8.615850e-47 |
| Msa0124450 | Msa1236160 | -0.813258 | 2.803853e-51 | -8.615850e-47 |
| Msa0124450 | Msa1243870 | 0.808808 | 2.582043e-50 | -8.615850e-47 |
| Msa0124450 | Msa1254730 | 0.806940 | 6.444178e-50 | -8.615850e-47 |
| Msa0124450 | Msa1262890 | 0.824410 | 8.193601e-54 | -8.615850e-47 |
| Msa0124450 | Msa1265590 | 0.852885 | 3.440543e-61 | -8.615850e-47 |
| Msa0124450 | Msa1265630 | 0.831689 | 1.447506e-55 | -8.615850e-47 |
| Msa0124450 | Msa1270660 | 0.807013 | 6.219318e-50 | -8.615850e-47 |
| Msa0124450 | Msa1294820 | 0.806022 | 1.006475e-49 | -8.615850e-47 |
| Msa0124450 | Msa1307180 | 0.837116 | 6.285090e-57 | -8.615850e-47 |
| Msa0124450 | Msa1307600 | 0.802494 | 5.462966e-49 | -8.615850e-47 |
| Msa0124450 | Msa1316360 | 0.838805 | 2.312338e-57 | -8.615850e-47 |
| Msa0124450 | Msa1330270 | 0.821332 | 4.271100e-53 | -8.615850e-47 |
| Msa0124450 | Msa1332050 | 0.812021 | 5.227026e-51 | -8.615850e-47 |
| Msa0124450 | Msa1332590 | 0.813691 | 2.251557e-51 | -8.615850e-47 |
| Msa0124450 | Msa1332760 | 0.822303 | 2.546163e-53 | -8.615850e-47 |
| Msa0124450 | Msa1336560 | 0.823748 | 1.172140e-53 | -8.615850e-47 |
| Msa0124450 | Msa1340200 | 0.831166 | 1.947603e-55 | -8.615850e-47 |
| Msa0124450 | Msa1342630 | 0.805660 | 1.198919e-49 | -8.615850e-47 |
| Msa0124450 | Msa1344310 | 0.801156 | 1.028555e-48 | -8.615850e-47 |
| Msa0124450 | Msa1348650 | -0.804551 | 2.045921e-49 | -8.615850e-47 |
| Msa0124450 | Msa1349520 | 0.842718 | 2.179432e-58 | -8.615850e-47 |
| Msa0124450 | Msa1351540 | 0.833287 | 5.815173e-56 | -8.615850e-47 |
| Msa0124450 | Msa1357890 | 0.824260 | 8.888949e-54 | -8.615850e-47 |
| Msa0124450 | Msa1359560 | 0.808362 | 3.214408e-50 | -8.615850e-47 |
| Msa0124450 | Msa1360980 | 0.812021 | 5.227696e-51 | -8.615850e-47 |
| Msa0124450 | Msa1364210 | 0.835976 | 1.226260e-56 | -8.615850e-47 |
| Msa0124450 | Msa1368430 | 0.801854 | 7.396897e-49 | -8.615850e-47 |
| Msa0124450 | Msa1369890 | 0.821835 | 3.269033e-53 | -8.615850e-47 |
| Msa0124450 | Msa1373100 | 0.804946 | 1.691828e-49 | -8.615850e-47 |
| Msa0124450 | Msa1378410 | 0.817663 | 2.933606e-52 | -8.615850e-47 |
| Msa0124450 | Msa1381480 | 0.805030 | 1.625276e-49 | -8.615850e-47 |
| Msa0124450 | Msa1383530 | 0.833380 | 5.514367e-56 | -8.615850e-47 |
| Msa0124450 | Msa1383740 | 0.807666 | 4.522028e-50 | -8.615850e-47 |
| Msa0124450 | Msa1384870 | 0.810822 | 9.523069e-51 | -8.615850e-47 |
| Msa0124450 | Msa1385720 | 0.839437 | 1.585606e-57 | -8.615850e-47 |
| Msa0124450 | Msa1390730 | 0.816028 | 6.827882e-52 | -8.615850e-47 |
| Msa0124450 | Msa1393840 | -0.834268 | 3.306468e-56 | -8.615850e-47 |
| Msa0124450 | Msa1394290 | 0.811101 | 8.284753e-51 | -8.615850e-47 |
| Msa0124450 | Msa1398090 | 0.819722 | 1.000225e-52 | -8.615850e-47 |
| Msa0124450 | Msa1407190 | 0.829372 | 5.340592e-55 | -8.615850e-47 |
| Msa0124450 | Msa1411950 | 0.833509 | 5.121006e-56 | -8.615850e-47 |
| Msa0124450 | Msa1412130 | 0.809569 | 1.773847e-50 | -8.615850e-47 |
| Msa0124450 | Msa1416370 | 0.833916 | 4.051075e-56 | -8.615850e-47 |
| Msa0124450 | Msa1419870 | 0.812052 | 5.146346e-51 | -8.615850e-47 |
| Msa0124450 | Msa1422950 | 0.805242 | 1.467404e-49 | -8.615850e-47 |
| Msa0124450 | Msa1424350 | 0.812291 | 4.564271e-51 | -8.615850e-47 |
| Msa0124450 | Msa1425260 | 0.802438 | 5.610569e-49 | -8.615850e-47 |
| Msa0124450 | Msa1425880 | 0.808636 | 2.810398e-50 | -8.615850e-47 |
| Msa0124450 | Msa1432130 | 0.825322 | 4.993006e-54 | -8.615850e-47 |
| Msa0124450 | Msa1434090 | 0.858033 | 1.087524e-62 | -8.615850e-47 |
| Msa0124450 | Msa1437270 | 0.840339 | 9.231128e-58 | -8.615850e-47 |
| Msa0124450 | Msa1437330 | 0.812658 | 3.794467e-51 | -8.615850e-47 |
| Msa0124450 | Msa1438520 | 0.807745 | 4.349874e-50 | -8.615850e-47 |
| Msa0124450 | Msa1440310 | 0.858903 | 5.983508e-63 | -8.615850e-47 |
| Msa0124450 | Msa1440880 | 0.816873 | 4.417362e-52 | -8.615850e-47 |
| Msa0124450 | Msa1446080 | 0.801984 | 6.955264e-49 | -8.615850e-47 |
| Msa0124450 | Msa1446820 | 0.830509 | 2.822269e-55 | -8.615850e-47 |
| Msa0124450 | Msa1447180 | 0.823194 | 1.579647e-53 | -8.615850e-47 |
| Msa0124450 | Msa1448490 | 0.830900 | 2.262811e-55 | -8.615850e-47 |
| Msa0124450 | Msa1450720 | 0.847995 | 8.124863e-60 | -8.615850e-47 |
| Msa0124450 | Msa1451160 | 0.832919 | 7.181541e-56 | -8.615850e-47 |
| Msa0124450 | Msa1454680 | 0.834363 | 3.130879e-56 | -8.615850e-47 |
| Msa0124450 | Msa1458770 | 0.808138 | 3.588231e-50 | -8.615850e-47 |
| Msa0124450 | Msa1461540 | 0.810262 | 1.257716e-50 | -8.615850e-47 |
| Msa0124450 | Msa1464090 | 0.800832 | 1.197985e-48 | -8.615850e-47 |
| Msa0124450 | Msa1466540 | 0.801660 | 8.109892e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0124450 | MtrunA17_Chr1g0185561 | 96.060 | 533 | 21 | 0 | 6 | 538 | 1 | 533 | 0.0 | 1034 |
| Msa0124450 | MtrunA17_Chr1g0205881 | 68.880 | 527 | 162 | 2 | 14 | 538 | 12 | 538 | 0.0 | 712 |
| Msa0124450 | MtrunA17_Chr5g0414351 | 26.748 | 329 | 210 | 4 | 209 | 507 | 216 | 543 | 2.84e-22 | 100 |
| Msa0124450 | MtrunA17_Chr5g0414351 | 27.138 | 269 | 196 | 0 | 229 | 497 | 209 | 477 | 4.53e-20 | 94.0 |
| Msa0124450 | MtrunA17_Chr5g0414351 | 24.658 | 292 | 158 | 7 | 209 | 467 | 328 | 590 | 1.23e-11 | 67.4 |
| Msa0124450 | MtrunA17_Chr3g0134391 | 46.067 | 89 | 45 | 2 | 22 | 109 | 36 | 122 | 7.16e-18 | 81.3 |
| Msa0124450 | MtrunA17_Chr1g0152901 | 32.759 | 116 | 76 | 1 | 11 | 126 | 17 | 130 | 4.24e-15 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0124450 | AT3G63130.1 | 68.911 | 505 | 150 | 3 | 6 | 509 | 1 | 499 | 0.0 | 704 |
| Msa0124450 | AT3G63130.2 | 68.911 | 505 | 150 | 3 | 6 | 509 | 1 | 499 | 0.0 | 704 |
| Msa0124450 | AT5G19320.1 | 67.546 | 493 | 158 | 2 | 16 | 506 | 10 | 502 | 0.0 | 637 |
| Msa0124450 | AT5G19320.2 | 67.546 | 493 | 158 | 2 | 16 | 506 | 10 | 502 | 0.0 | 637 |
| Msa0124450 | AT3G06000.1 | 50.000 | 184 | 79 | 2 | 326 | 509 | 16 | 186 | 2.28e-47 | 164 |
| Msa0124450 | AT1G10510.1 | 30.292 | 274 | 191 | 0 | 224 | 497 | 203 | 476 | 4.18e-25 | 109 |
| Msa0124450 | AT1G10510.1 | 30.249 | 281 | 191 | 4 | 216 | 492 | 307 | 586 | 6.34e-21 | 97.1 |
| Msa0124450 | AT1G47200.1 | 36.697 | 109 | 67 | 1 | 18 | 126 | 56 | 162 | 4.29e-15 | 73.9 |
| Msa0124450 | AT5G43070.1 | 41.111 | 90 | 51 | 1 | 17 | 106 | 39 | 126 | 7.37e-15 | 72.8 |
Find 126 sgRNAs with CRISPR-Local
Find 262 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCACCGTCACTGGAAATTT+TGG | 0.158218 | 1_3:+52250018 | Msa0124450:CDS |
| GCAACTTAAATCCAGGTTTC+TGG | 0.190819 | 1_3:-52250267 | None:intergenic |
| GTTTCTAGGTTCTGTTGATA+TGG | 0.260007 | 1_3:+52248857 | Msa0124450:intron |
| CCTCAGTTATTTGAACTTAG+AGG | 0.267220 | 1_3:+52249955 | Msa0124450:CDS |
| CGTCTCCAGTCATGTTATTA+TGG | 0.271627 | 1_3:-52249706 | None:intergenic |
| ACCTGACATGCTGGGTCCTT+TGG | 0.274094 | 1_3:+52250357 | Msa0124450:CDS |
| GGTCGCAGAGCTTTCATTAA+TGG | 0.274791 | 1_3:+52249266 | Msa0124450:CDS |
| CATATCTTTGTAAAAGAGTT+TGG | 0.287321 | 1_3:-52249326 | None:intergenic |
| CCAAGAGGGAAGGAGGATAA+TGG | 0.287624 | 1_3:+52249185 | Msa0124450:CDS |
| ATGTCTATTGCAAACATAAT+TGG | 0.305651 | 1_3:-52250530 | None:intergenic |
| GTCGCAGAGCTTTCATTAAT+GGG | 0.308702 | 1_3:+52249267 | Msa0124450:CDS |
| TTGCTCTTGCTGAAGCGCTT+GGG | 0.313724 | 1_3:+52249822 | Msa0124450:CDS |
| TGTTTCAGTAATAGAAGTTT+TGG | 0.325309 | 1_3:+52249347 | Msa0124450:CDS |
| TTCATCTTTCAATTCATTCT+CGG | 0.330579 | 1_3:-52250131 | None:intergenic |
| ACTTCAATAGCTTCTGCTTC+TGG | 0.333568 | 1_3:-52249461 | None:intergenic |
| ATATATGTTCTTAATATATC+TGG | 0.334642 | 1_3:+52250640 | Msa0124450:three_prime_UTR |
| CAAGAGGGAAGGAGGATAAT+GGG | 0.336187 | 1_3:+52249186 | Msa0124450:CDS |
| GTTGCTCTTGCTGAAGCGCT+TGG | 0.338191 | 1_3:+52249821 | Msa0124450:CDS |
| TCATCAACGTCCTCTCCTTC+AGG | 0.355513 | 1_3:-52250391 | None:intergenic |
| CCATTATCCTCCTTCCCTCT+TGG | 0.358469 | 1_3:-52249185 | None:intergenic |
| ATATCTGGCAAGACAAGAAA+TGG | 0.359192 | 1_3:+52250655 | Msa0124450:three_prime_UTR |
| TGAGATTTAAGAAGATTCAT+AGG | 0.375062 | 1_3:+52250468 | Msa0124450:exon |
| TGTGAAACGTTCCCCAGCTT+TGG | 0.391512 | 1_3:+52249754 | Msa0124450:CDS |
| AGCCCTTGCTAATGCTTTGA+AGG | 0.393810 | 1_3:+52249991 | Msa0124450:CDS |
| CCCTTCCACTGAGAAGCTTA+AGG | 0.398979 | 1_3:+52249673 | Msa0124450:CDS |
| AGAGCTTCTAAAACCATTGA+TGG | 0.410753 | 1_3:+52249301 | Msa0124450:CDS |
| GAAGGAATCTGCACCGTCAC+TGG | 0.422448 | 1_3:+52250009 | Msa0124450:CDS |
| AAAGAGTTTGGTCCCATCAA+TGG | 0.422926 | 1_3:-52249314 | None:intergenic |
| CACCCATGGCATTATTTGAC+AGG | 0.423148 | 1_3:-52249535 | None:intergenic |
| TCCAAAGGACCCAGCATGTC+AGG | 0.424980 | 1_3:-52250358 | None:intergenic |
| GAGCTTTATTTGATGAATGA+TGG | 0.428296 | 1_3:+52249611 | Msa0124450:CDS |
| ACAAATTTGATCACATGGTC+TGG | 0.437019 | 1_3:+52250217 | Msa0124450:CDS |
| TGGGGAGTTGATATCTGAAA+AGG | 0.439605 | 1_3:+52249205 | Msa0124450:CDS |
| AAATAATGCCATGGGTGAAA+AGG | 0.442002 | 1_3:+52249541 | Msa0124450:CDS |
| GCCAACTTCATTTCTGATGA+AGG | 0.446090 | 1_3:+52250301 | Msa0124450:CDS |
| CACCGAAAATCTTCCAAAGC+TGG | 0.450378 | 1_3:-52249767 | None:intergenic |
| AATAATGCCATGGGTGAAAA+GGG | 0.461364 | 1_3:+52249542 | Msa0124450:CDS |
| CATAAGCTTACTCGATTCCT+TGG | 0.462204 | 1_3:-52249141 | None:intergenic |
| AGAAAATAGACGGAGTCGTC+AGG | 0.468919 | 1_3:-52248980 | None:intergenic |
| GGAAATGAATTGCCAGCAAA+AGG | 0.470098 | 1_3:-52250718 | None:intergenic |
| CGGTGTTCATCTACCAGAGT+AGG | 0.471423 | 1_3:+52249785 | Msa0124450:CDS |
| AGGTGCAGGTTTAATTAGTA+AGG | 0.472052 | 1_3:+52250153 | Msa0124450:CDS |
| ATCTTTAATTGATATTAGCA+TGG | 0.476224 | 1_3:-52249396 | None:intergenic |
| CCTTAAATCACAAAATGACT+TGG | 0.476235 | 1_3:+52249586 | Msa0124450:CDS |
| GGCCTCCAAGTCAGAGTACT+AGG | 0.483558 | 1_3:+52248928 | Msa0124450:CDS |
| AAATGGGCAAATGGTATGAA+TGG | 0.483563 | 1_3:+52250672 | Msa0124450:three_prime_UTR |
| ATCGAGTAAGCTTATGTTGG+AGG | 0.487701 | 1_3:+52249148 | Msa0124450:CDS |
| GGGGAGTTGATATCTGAAAA+GGG | 0.487734 | 1_3:+52249206 | Msa0124450:CDS |
| ACCGAAAATCTTCCAAAGCT+GGG | 0.488948 | 1_3:-52249766 | None:intergenic |
| GAAGCTGTTGTCCAGAAACC+TGG | 0.491319 | 1_3:+52250256 | Msa0124450:CDS |
| CGGATAAATTTAACTTGGTG+AGG | 0.494899 | 1_3:-52250111 | None:intergenic |
| TGCTCTTGCTGAAGCGCTTG+GGG | 0.498032 | 1_3:+52249823 | Msa0124450:CDS |
| TAAATCACAAAATGACTTGG+AGG | 0.498668 | 1_3:+52249589 | Msa0124450:CDS |
| CAAGACAAGAAATGGGCAAA+TGG | 0.499438 | 1_3:+52250663 | Msa0124450:three_prime_UTR |
| GAGAATGAATTGAAAGATGA+AGG | 0.503082 | 1_3:+52250133 | Msa0124450:CDS |
| CATTTCCATAATAACATGAC+TGG | 0.503127 | 1_3:+52249701 | Msa0124450:CDS |
| AACATGTTTGGTGTGGAAGC+TGG | 0.506518 | 1_3:+52249881 | Msa0124450:CDS |
| CCAACTTCATTTCTGATGAA+GGG | 0.507173 | 1_3:+52250302 | Msa0124450:CDS |
| GATTTGCGTGACAACATGTT+TGG | 0.507634 | 1_3:+52249869 | Msa0124450:CDS |
| AATTAAAGATCAACTGAAAG+AGG | 0.511896 | 1_3:+52249409 | Msa0124450:CDS |
| TCTGTAAGATCAGCAAATAC+AGG | 0.513065 | 1_3:-52249926 | None:intergenic |
| ATATTCAGCAACTTAAATCC+AGG | 0.517009 | 1_3:-52250274 | None:intergenic |
| GCAGAACTCCCATCACCATC+AGG | 0.519389 | 1_3:-52249104 | None:intergenic |
| TGCGACCCAACACTTTGAAA+AGG | 0.522092 | 1_3:+52249079 | Msa0124450:CDS |
| TGCTGTGCAAATTTATGCCA+AGG | 0.523338 | 1_3:+52249124 | Msa0124450:CDS |
| ACCTTAAGCTTCTCAGTGGA+AGG | 0.523910 | 1_3:-52249674 | None:intergenic |
| TCTTTAATTGATATTAGCAT+GGG | 0.527745 | 1_3:-52249395 | None:intergenic |
| AACCTAGTACTCTGACTTGG+AGG | 0.528886 | 1_3:-52248930 | None:intergenic |
| ATGAATCTTCTTAAATCTCA+AGG | 0.529266 | 1_3:-52250465 | None:intergenic |
| GAAAAGGAGCCTGATGGTGA+TGG | 0.530765 | 1_3:+52249095 | Msa0124450:CDS |
| TAACAAAGATGAGGCTGAGA+AGG | 0.532357 | 1_3:+52249022 | Msa0124450:CDS |
| AACAGCTTCTGCCAACAGCT+TGG | 0.534878 | 1_3:-52250242 | None:intergenic |
| TGTTAGTTGAACGAATGGTC+AGG | 0.535510 | 1_3:+52248955 | Msa0124450:CDS |
| TAACCTGTCAAATAATGCCA+TGG | 0.536436 | 1_3:+52249532 | Msa0124450:CDS |
| ATTCTCGGATAAATTTAACT+TGG | 0.537197 | 1_3:-52250116 | None:intergenic |
| CCCTTCATCAGAAATGAAGT+TGG | 0.537535 | 1_3:-52250302 | None:intergenic |
| TATCTGGCAAGACAAGAAAT+GGG | 0.538330 | 1_3:+52250656 | Msa0124450:three_prime_UTR |
| TTTGTGATTTAAGGAGTGCC+CGG | 0.539029 | 1_3:-52249577 | None:intergenic |
| AGGTTTAATTAGTAAGGCGC+TGG | 0.544570 | 1_3:+52250159 | Msa0124450:CDS |
| GTTGATGTTAGTTGAACGAA+TGG | 0.555548 | 1_3:+52248950 | Msa0124450:CDS |
| TCTACCAGAGTAGGCTCTGA+AGG | 0.560072 | 1_3:+52249794 | Msa0124450:CDS |
| GAAGGATGCAAAGGAAATTG+AGG | 0.561870 | 1_3:+52249040 | Msa0124450:CDS |
| ATCAACCTAGTACTCTGACT+TGG | 0.566163 | 1_3:-52248933 | None:intergenic |
| ATTCCTTCAAAGCATTAGCA+AGG | 0.570197 | 1_3:-52249994 | None:intergenic |
| AGGAGAGGACGTTGATGAAG+AGG | 0.572691 | 1_3:+52250396 | Msa0124450:CDS |
| AGTAAGGCGCTGGAAGGTCG+TGG | 0.574225 | 1_3:+52250169 | Msa0124450:CDS |
| TTCCTTCAAAGCATTAGCAA+GGG | 0.575261 | 1_3:-52249993 | None:intergenic |
| GAGCTTCTAAAACCATTGAT+GGG | 0.582760 | 1_3:+52249302 | Msa0124450:CDS |
| GAACACTTTCAATCAAGTTG+TGG | 0.586485 | 1_3:+52248907 | Msa0124450:CDS |
| AACCTGTCAAATAATGCCAT+GGG | 0.587490 | 1_3:+52249533 | Msa0124450:CDS |
| AAGAGGACCAAGAGGGAAGG+AGG | 0.587498 | 1_3:+52249178 | Msa0124450:CDS |
| TCAGGATCATTCTCATCCAA+AGG | 0.589310 | 1_3:-52250373 | None:intergenic |
| GGAATCGAGTAAGCTTATGT+TGG | 0.591102 | 1_3:+52249145 | Msa0124450:CDS |
| GACTTGGAGTCAAAACTGAA+AGG | 0.592400 | 1_3:+52250442 | Msa0124450:CDS |
| ACCACCTTCAGAGCCTACTC+TGG | 0.593405 | 1_3:-52249798 | None:intergenic |
| ATGGTCTGGAGCCAAGCTGT+TGG | 0.593553 | 1_3:+52250231 | Msa0124450:CDS |
| TGATTCTGATAATGATGACT+TGG | 0.594422 | 1_3:+52250426 | Msa0124450:CDS |
| CAGAGCTTTCATTAATGGGG+AGG | 0.598559 | 1_3:+52249271 | Msa0124450:CDS |
| TTAATTAGTAAGGCGCTGGA+AGG | 0.600794 | 1_3:+52250163 | Msa0124450:CDS |
| GAATTGAAAGATGAAGGTGC+AGG | 0.601464 | 1_3:+52250139 | Msa0124450:CDS |
| AAGAGGGAAGGAGGATAATG+GGG | 0.609565 | 1_3:+52249187 | Msa0124450:CDS |
| TAATGCCATGGGTGAAAAGG+GGG | 0.611795 | 1_3:+52249544 | Msa0124450:CDS |
| AAGCACGACTCAGCAATCAA+AGG | 0.617202 | 1_3:-52250739 | None:intergenic |
| AAAAGGAGCCTGATGGTGAT+GGG | 0.618474 | 1_3:+52249096 | Msa0124450:CDS |
| TACTTTCTAGAGAAAATAGA+CGG | 0.618656 | 1_3:-52248990 | None:intergenic |
| GATGAATGATGGTATATCAG+AGG | 0.619244 | 1_3:+52249622 | Msa0124450:CDS |
| TGAGGCTGAGAAGGATGCAA+AGG | 0.619486 | 1_3:+52249031 | Msa0124450:CDS |
| ATATCCAAAATTTCCAGTGA+CGG | 0.620331 | 1_3:-52250022 | None:intergenic |
| GAAAAGAGGACCAAGAGGGA+AGG | 0.620402 | 1_3:+52249175 | Msa0124450:CDS |
| CACTTTGAAAAGGAGCCTGA+TGG | 0.620964 | 1_3:+52249089 | Msa0124450:CDS |
| CCTTAAGCTTCTCAGTGGAA+GGG | 0.628373 | 1_3:-52249673 | None:intergenic |
| TGAGTACAAATTTGATCACA+TGG | 0.630339 | 1_3:+52250212 | Msa0124450:CDS |
| CCGAAAATCTTCCAAAGCTG+GGG | 0.630768 | 1_3:-52249765 | None:intergenic |
| TTGGATGAGAATGATCCTGA+AGG | 0.631234 | 1_3:+52250376 | Msa0124450:CDS |
| ATAATGCCATGGGTGAAAAG+GGG | 0.631439 | 1_3:+52249543 | Msa0124450:CDS |
| TGAGAATGATCCTGAAGGAG+AGG | 0.636079 | 1_3:+52250381 | Msa0124450:CDS |
| TGATTGAAAGTGTTCGATGT+TGG | 0.637029 | 1_3:-52248899 | None:intergenic |
| AATAACATGACTGGAGACGA+AGG | 0.637173 | 1_3:+52249710 | Msa0124450:CDS |
| TGGACTTCTTAACAAAGATG+AGG | 0.646938 | 1_3:+52249013 | Msa0124450:CDS |
| AAGAACCTTAAGCTTCTCAG+TGG | 0.653888 | 1_3:-52249678 | None:intergenic |
| CCTCTAAGTTCAAATAACTG+AGG | 0.660358 | 1_3:-52249955 | None:intergenic |
| GCGTGACAACATGTTTGGTG+TGG | 0.661175 | 1_3:+52249874 | Msa0124450:CDS |
| TCGCAGAGCTTTCATTAATG+GGG | 0.661648 | 1_3:+52249268 | Msa0124450:CDS |
| TATTTGAACTTAGAGGACGA+TGG | 0.662229 | 1_3:+52249962 | Msa0124450:CDS |
| ACCAGAGTAGGCTCTGAAGG+TGG | 0.671940 | 1_3:+52249797 | Msa0124450:CDS |
| AGTGTTCGATGTTGGTACGA+CGG | 0.709109 | 1_3:-52248891 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATACTAATAAAGATATT+TGG | - | chr1_3:52247822-52247841 | None:intergenic | 10.0% |
| !! | TGATGATTAAAAAAATTAGT+TGG | - | chr1_3:52247905-52247924 | None:intergenic | 15.0% |
| !!! | TTTTTCATATGGTATAATTA+TGG | + | chr1_3:52248455-52248474 | Msa0124450:intron | 15.0% |
| !!! | TTTTCATATGGTATAATTAT+GGG | + | chr1_3:52248456-52248475 | Msa0124450:intron | 15.0% |
| !!! | CATTTTAATTTTTGAAAACT+TGG | + | chr1_3:52248544-52248563 | Msa0124450:intron | 15.0% |
| !!! | GATATATTTTAACAACAATA+GGG | - | chr1_3:52248673-52248692 | None:intergenic | 15.0% |
| !!! | ATTAATGAATTTTTAAGAGT+AGG | + | chr1_3:52248759-52248778 | Msa0124450:intron | 15.0% |
| !! | ATATATGTTCTTAATATATC+TGG | + | chr1_3:52250640-52250659 | Msa0124450:three_prime_UTR | 15.0% |
| !!! | AGTTTTTAACATTTCTTTTC+AGG | + | chr1_3:52247320-52247339 | Msa0124450:intron | 20.0% |
| !! | ACTAAAAAACATTTCTCTTT+AGG | - | chr1_3:52247521-52247540 | None:intergenic | 20.0% |
| !! | TTGAAAATGAAAAAATGTGA+TGG | - | chr1_3:52247768-52247787 | None:intergenic | 20.0% |
| !! | AATGAAACAGAACTAAAAAA+TGG | - | chr1_3:52248105-52248124 | None:intergenic | 20.0% |
| !!! | TTTAGTTCTGTTTCATTTTT+AGG | + | chr1_3:52248108-52248127 | Msa0124450:intron | 20.0% |
| !!! | TTAGTTCTGTTTCATTTTTA+GGG | + | chr1_3:52248109-52248128 | Msa0124450:intron | 20.0% |
| !! | CTTATACTATATTATTGCAT+AGG | + | chr1_3:52248252-52248271 | Msa0124450:intron | 20.0% |
| !!! | CGATATATTTTAACAACAAT+AGG | - | chr1_3:52248674-52248693 | None:intergenic | 20.0% |
| !!! | TTATTGTTATACTTGTTTCT+AGG | + | chr1_3:52248843-52248862 | Msa0124450:intron | 20.0% |
| !! | TCTTTAATTGATATTAGCAT+GGG | - | chr1_3:52249398-52249417 | None:intergenic | 20.0% |
| !! | ATCTTTAATTGATATTAGCA+TGG | - | chr1_3:52249399-52249418 | None:intergenic | 20.0% |
| !!! | AGATTTTTGATTTCATAACT+TGG | + | chr1_3:52250597-52250616 | Msa0124450:three_prime_UTR | 20.0% |
| !!! | TATGAATGGTAGAAATTTTT+GGG | + | chr1_3:52250686-52250705 | Msa0124450:three_prime_UTR | 20.0% |
| ! | CACATTTAGTAGTTATATAC+CGG | + | chr1_3:52247352-52247371 | Msa0124450:intron | 25.0% |
| ! | TTGCTAAATAAACATACATC+TGG | + | chr1_3:52247416-52247435 | Msa0124450:intron | 25.0% |
| ! | TAATTATGGTTCGTCTATTT+GGG | - | chr1_3:52247600-52247619 | None:intergenic | 25.0% |
| ! | AAATAGACGAACCATAATTA+GGG | + | chr1_3:52247600-52247619 | Msa0124450:intron | 25.0% |
| ! | TTGGGATTTCAATTTCAAAA+TGG | + | chr1_3:52247693-52247712 | Msa0124450:intron | 25.0% |
| !! | AAATGAAAAAATGTGATGGA+TGG | - | chr1_3:52247764-52247783 | None:intergenic | 25.0% |
| ! | TTACTTCTACAAAGTAACTA+TGG | - | chr1_3:52248157-52248176 | None:intergenic | 25.0% |
| ! | TATATTATTGCATAGGATTG+TGG | + | chr1_3:52248259-52248278 | Msa0124450:intron | 25.0% |
| !!! | TGTTGTTTGATTTGAAATAC+CGG | + | chr1_3:52248345-52248364 | Msa0124450:intron | 25.0% |
| !! | TGCTTGATATGTTTTTCATA+TGG | + | chr1_3:52248444-52248463 | Msa0124450:intron | 25.0% |
| !!! | TGCGCAAATTAATCTTTTTT+AGG | + | chr1_3:52248501-52248520 | Msa0124450:intron | 25.0% |
| !!! | GCGCAAATTAATCTTTTTTA+GGG | + | chr1_3:52248502-52248521 | Msa0124450:intron | 25.0% |
| !! | TACTTTCTAGAGAAAATAGA+CGG | - | chr1_3:52248993-52249012 | None:intergenic | 25.0% |
| !!! | TCTATTTTCTCTAGAAAGTA+TGG | + | chr1_3:52248993-52249012 | Msa0124450:CDS | 25.0% |
| !!! | AAACTGTTTTTGACATTTCT+GGG | + | chr1_3:52249243-52249262 | Msa0124450:CDS | 25.0% |
| ! | CATATCTTTGTAAAAGAGTT+TGG | - | chr1_3:52249329-52249348 | None:intergenic | 25.0% |
| !! | TGTTTCAGTAATAGAAGTTT+TGG | + | chr1_3:52249347-52249366 | Msa0124450:CDS | 25.0% |
| ! | AATTAAAGATCAACTGAAAG+AGG | + | chr1_3:52249409-52249428 | Msa0124450:CDS | 25.0% |
| !! | ATATTTTCTTCTGCATTAGA+AGG | + | chr1_3:52249491-52249510 | Msa0124450:CDS | 25.0% |
| ! | ATTCTCGGATAAATTTAACT+TGG | - | chr1_3:52250119-52250138 | None:intergenic | 25.0% |
| ! | TTCATCTTTCAATTCATTCT+CGG | - | chr1_3:52250134-52250153 | None:intergenic | 25.0% |
| ! | ATGAATCTTCTTAAATCTCA+AGG | - | chr1_3:52250468-52250487 | None:intergenic | 25.0% |
| ! | TGAGATTTAAGAAGATTCAT+AGG | + | chr1_3:52250468-52250487 | Msa0124450:exon | 25.0% |
| ! | ATGTCTATTGCAAACATAAT+TGG | - | chr1_3:52250533-52250552 | None:intergenic | 25.0% |
| !! | GTATGAATGGTAGAAATTTT+TGG | + | chr1_3:52250685-52250704 | Msa0124450:three_prime_UTR | 25.0% |
| TTATTTAGCAAGTTATCTCC+TGG | - | chr1_3:52247407-52247426 | None:intergenic | 30.0% | |
| TACATCTGGTAGATAACAAT+CGG | + | chr1_3:52247430-52247449 | Msa0124450:intron | 30.0% | |
| AATTACCCGAATATGTACTT+AGG | + | chr1_3:52247474-52247493 | Msa0124450:intron | 30.0% | |
| ATTACCCGAATATGTACTTA+GGG | + | chr1_3:52247475-52247494 | Msa0124450:intron | 30.0% | |
| CTAATTATGGTTCGTCTATT+TGG | - | chr1_3:52247601-52247620 | None:intergenic | 30.0% | |
| CAAATAGACGAACCATAATT+AGG | + | chr1_3:52247599-52247618 | Msa0124450:intron | 30.0% | |
| GTCATTCATGAAGAAATACA+AGG | + | chr1_3:52247631-52247650 | Msa0124450:intron | 30.0% | |
| GGATTTCAATTTCAAAATGG+TGG | + | chr1_3:52247696-52247715 | Msa0124450:intron | 30.0% | |
| ! | ACTGCACTTTATCTTTTTCT+AGG | + | chr1_3:52247962-52247981 | Msa0124450:intron | 30.0% |
| ! | CTGCACTTTATCTTTTTCTA+GGG | + | chr1_3:52247963-52247982 | Msa0124450:intron | 30.0% |
| GTGACTATAAATTACAGATC+CGG | - | chr1_3:52248367-52248386 | None:intergenic | 30.0% | |
| ATCGCTATATATGCATATTG+TGG | + | chr1_3:52248690-52248709 | Msa0124450:intron | 30.0% | |
| !!! | GAAACTGTTTTTGACATTTC+TGG | + | chr1_3:52249242-52249261 | Msa0124450:CDS | 30.0% |
| !!! | AACTGTTTTTGACATTTCTG+GGG | + | chr1_3:52249244-52249263 | Msa0124450:CDS | 30.0% |
| !!! | CAGTAATAGAAGTTTTGGTT+TGG | + | chr1_3:52249352-52249371 | Msa0124450:CDS | 30.0% |
| ! | ATCTGTCAGATTTTATTGCT+GGG | + | chr1_3:52249435-52249454 | Msa0124450:CDS | 30.0% |
| !! | CCAAGTCATTTTGTGATTTA+AGG | - | chr1_3:52249589-52249608 | None:intergenic | 30.0% |
| CCTTAAATCACAAAATGACT+TGG | + | chr1_3:52249586-52249605 | Msa0124450:CDS | 30.0% | |
| ! | TAAATCACAAAATGACTTGG+AGG | + | chr1_3:52249589-52249608 | Msa0124450:CDS | 30.0% |
| !! | GAGCTTTATTTGATGAATGA+TGG | + | chr1_3:52249611-52249630 | Msa0124450:CDS | 30.0% |
| CATTTCCATAATAACATGAC+TGG | + | chr1_3:52249701-52249720 | Msa0124450:CDS | 30.0% | |
| ATATCCAAAATTTCCAGTGA+CGG | - | chr1_3:52250025-52250044 | None:intergenic | 30.0% | |
| GAGAATGAATTGAAAGATGA+AGG | + | chr1_3:52250133-52250152 | Msa0124450:CDS | 30.0% | |
| TGAGTACAAATTTGATCACA+TGG | + | chr1_3:52250212-52250231 | Msa0124450:CDS | 30.0% | |
| ATATTCAGCAACTTAAATCC+AGG | - | chr1_3:52250277-52250296 | None:intergenic | 30.0% | |
| ! | TGATTCTGATAATGATGACT+TGG | + | chr1_3:52250426-52250445 | Msa0124450:CDS | 30.0% |
| !! | GCTACTTCAGATTATTTTGT+AGG | + | chr1_3:52250507-52250526 | Msa0124450:three_prime_UTR | 30.0% |
| TTACCCGAATATGTACTTAG+GGG | + | chr1_3:52247476-52247495 | Msa0124450:intron | 35.0% | |
| !!! | AGGCTAAAACTGTCATTTTG+TGG | + | chr1_3:52247651-52247670 | Msa0124450:intron | 35.0% |
| !!! | GGCTAAAACTGTCATTTTGT+GGG | + | chr1_3:52247652-52247671 | Msa0124450:intron | 35.0% |
| AGAGAAGAGAAAGAAAAGAG+GGG | - | chr1_3:52248052-52248071 | None:intergenic | 35.0% | |
| CAGAGAAGAGAAAGAAAAGA+GGG | - | chr1_3:52248053-52248072 | None:intergenic | 35.0% | |
| CATAGGATTGTGGTCAAATA+GGG | + | chr1_3:52248269-52248288 | Msa0124450:intron | 35.0% | |
| ! | CCAGATTTTCGATATCAAAG+CGG | - | chr1_3:52248303-52248322 | None:intergenic | 35.0% |
| AGAGACCTTGTTCAAATCAA+GGG | - | chr1_3:52248420-52248439 | None:intergenic | 35.0% | |
| !!! | TGAGTCTTCTGCTGTTTTTT+AGG | + | chr1_3:52248784-52248803 | Msa0124450:intron | 35.0% |
| ! | GTTTCTAGGTTCTGTTGATA+TGG | + | chr1_3:52248857-52248876 | Msa0124450:intron | 35.0% |
| !! | TGATTGAAAGTGTTCGATGT+TGG | - | chr1_3:52248902-52248921 | None:intergenic | 35.0% |
| ! | GAACACTTTCAATCAAGTTG+TGG | + | chr1_3:52248907-52248926 | Msa0124450:CDS | 35.0% |
| GTTGATGTTAGTTGAACGAA+TGG | + | chr1_3:52248950-52248969 | Msa0124450:CDS | 35.0% | |
| TGGACTTCTTAACAAAGATG+AGG | + | chr1_3:52249013-52249032 | Msa0124450:CDS | 35.0% | |
| !!! | ATGTTGGAGGTTTTGAAAAG+AGG | + | chr1_3:52249161-52249180 | Msa0124450:CDS | 35.0% |
| !! | TTTTGAAAAGAGGACCAAGA+GGG | + | chr1_3:52249171-52249190 | Msa0124450:CDS | 35.0% |
| !!! | ACTGTTTTTGACATTTCTGG+GGG | + | chr1_3:52249245-52249264 | Msa0124450:CDS | 35.0% |
| !! | AGAGCTTCTAAAACCATTGA+TGG | + | chr1_3:52249301-52249320 | Msa0124450:CDS | 35.0% |
| !! | GAGCTTCTAAAACCATTGAT+GGG | + | chr1_3:52249302-52249321 | Msa0124450:CDS | 35.0% |
| ! | GATCTGTCAGATTTTATTGC+TGG | + | chr1_3:52249434-52249453 | Msa0124450:CDS | 35.0% |
| TAACCTGTCAAATAATGCCA+TGG | + | chr1_3:52249532-52249551 | Msa0124450:CDS | 35.0% | |
| AACCTGTCAAATAATGCCAT+GGG | + | chr1_3:52249533-52249552 | Msa0124450:CDS | 35.0% | |
| AAATAATGCCATGGGTGAAA+AGG | + | chr1_3:52249541-52249560 | Msa0124450:CDS | 35.0% | |
| AATAATGCCATGGGTGAAAA+GGG | + | chr1_3:52249542-52249561 | Msa0124450:CDS | 35.0% | |
| GATGAATGATGGTATATCAG+AGG | + | chr1_3:52249622-52249641 | Msa0124450:CDS | 35.0% | |
| TCTGTAAGATCAGCAAATAC+AGG | - | chr1_3:52249929-52249948 | None:intergenic | 35.0% | |
| CCTCTAAGTTCAAATAACTG+AGG | - | chr1_3:52249958-52249977 | None:intergenic | 35.0% | |
| CCTCAGTTATTTGAACTTAG+AGG | + | chr1_3:52249955-52249974 | Msa0124450:CDS | 35.0% | |
| TATTTGAACTTAGAGGACGA+TGG | + | chr1_3:52249962-52249981 | Msa0124450:CDS | 35.0% | |
| ! | TTCCTTCAAAGCATTAGCAA+GGG | - | chr1_3:52249996-52250015 | None:intergenic | 35.0% |
| ! | ATTCCTTCAAAGCATTAGCA+AGG | - | chr1_3:52249997-52250016 | None:intergenic | 35.0% |
| ! | GTCACTGGAAATTTTGGATA+TGG | + | chr1_3:52250024-52250043 | Msa0124450:CDS | 35.0% |
| ! | TGGAAATTTTGGATATGGCT+GGG | + | chr1_3:52250029-52250048 | Msa0124450:CDS | 35.0% |
| !! | CGGATAAATTTAACTTGGTG+AGG | - | chr1_3:52250114-52250133 | None:intergenic | 35.0% |
| AGGTGCAGGTTTAATTAGTA+AGG | + | chr1_3:52250153-52250172 | Msa0124450:CDS | 35.0% | |
| ACAAATTTGATCACATGGTC+TGG | + | chr1_3:52250217-52250236 | Msa0124450:CDS | 35.0% | |
| CCAACTTCATTTCTGATGAA+GGG | + | chr1_3:52250302-52250321 | Msa0124450:CDS | 35.0% | |
| ATATCTGGCAAGACAAGAAA+TGG | + | chr1_3:52250655-52250674 | Msa0124450:three_prime_UTR | 35.0% | |
| TATCTGGCAAGACAAGAAAT+GGG | + | chr1_3:52250656-52250675 | Msa0124450:three_prime_UTR | 35.0% | |
| AAATGGGCAAATGGTATGAA+TGG | + | chr1_3:52250672-52250691 | Msa0124450:three_prime_UTR | 35.0% | |
| TACCCGAATATGTACTTAGG+GGG | + | chr1_3:52247477-52247496 | Msa0124450:intron | 40.0% | |
| AGACCCCCTAAGTACATATT+CGG | - | chr1_3:52247483-52247502 | None:intergenic | 40.0% | |
| TTAGGGGGTCTAAGAGATAT+AGG | + | chr1_3:52247492-52247511 | Msa0124450:intron | 40.0% | |
| TAGGGGGTCTAAGAGATATA+GGG | + | chr1_3:52247493-52247512 | Msa0124450:intron | 40.0% | |
| ATTCTCCAAAGCCCAAGTAT+AGG | + | chr1_3:52247574-52247593 | Msa0124450:intron | 40.0% | |
| GTCTATTTGGGCCTATACTT+GGG | - | chr1_3:52247588-52247607 | None:intergenic | 40.0% | |
| GACGTCACAAACCCTAATTA+TGG | - | chr1_3:52247614-52247633 | None:intergenic | 40.0% | |
| !!! | AACTGTCATTTTGTGGGAAG+CGG | + | chr1_3:52247658-52247677 | Msa0124450:intron | 40.0% |
| GAAATTGAAATCCCAAAGCG+TGG | - | chr1_3:52247689-52247708 | None:intergenic | 40.0% | |
| ! | TGGTGGCGTTTAAAAAAAGC+TGG | + | chr1_3:52247713-52247732 | Msa0124450:intron | 40.0% |
| ! | TAGTTGGAGCCTTTTTATGC+TGG | - | chr1_3:52247889-52247908 | None:intergenic | 40.0% |
| AGAGAAAGAAAAGAGGGGAA+TGG | - | chr1_3:52248047-52248066 | None:intergenic | 40.0% | |
| GCAGAGAAGAGAAAGAAAAG+AGG | - | chr1_3:52248054-52248073 | None:intergenic | 40.0% | |
| CAAAGTAACTATGGCGCTAT+GGG | - | chr1_3:52248148-52248167 | None:intergenic | 40.0% | |
| ACAAAGTAACTATGGCGCTA+TGG | - | chr1_3:52248149-52248168 | None:intergenic | 40.0% | |
| GCATAGGATTGTGGTCAAAT+AGG | + | chr1_3:52248268-52248287 | Msa0124450:intron | 40.0% | |
| CCGCTTTGATATCGAAAATC+TGG | + | chr1_3:52248300-52248319 | Msa0124450:intron | 40.0% | |
| GAGACCTTGTTCAAATCAAG+GGG | - | chr1_3:52248419-52248438 | None:intergenic | 40.0% | |
| CAGAGACCTTGTTCAAATCA+AGG | - | chr1_3:52248421-52248440 | None:intergenic | 40.0% | |
| ! | CTTGATTTGAACAAGGTCTC+TGG | + | chr1_3:52248419-52248438 | Msa0124450:intron | 40.0% |
| CCTCAGATTAATCAGTCCTT+GGG | - | chr1_3:52248578-52248597 | None:intergenic | 40.0% | |
| CCAAGGACTGATTAATCTGA+GGG | + | chr1_3:52248576-52248595 | Msa0124450:intron | 40.0% | |
| CAAGGACTGATTAATCTGAG+GGG | + | chr1_3:52248577-52248596 | Msa0124450:intron | 40.0% | |
| !!! | TTCTGCTGTTTTTTAGGCAC+TGG | + | chr1_3:52248790-52248809 | Msa0124450:intron | 40.0% |
| ATCAACCTAGTACTCTGACT+TGG | - | chr1_3:52248936-52248955 | None:intergenic | 40.0% | |
| TGTTAGTTGAACGAATGGTC+AGG | + | chr1_3:52248955-52248974 | Msa0124450:CDS | 40.0% | |
| TAACAAAGATGAGGCTGAGA+AGG | + | chr1_3:52249022-52249041 | Msa0124450:CDS | 40.0% | |
| GAAGGATGCAAAGGAAATTG+AGG | + | chr1_3:52249040-52249059 | Msa0124450:CDS | 40.0% | |
| !! | AGGCTCCTTTTCAAAGTGTT+GGG | - | chr1_3:52249087-52249106 | None:intergenic | 40.0% |
| TGCTGTGCAAATTTATGCCA+AGG | + | chr1_3:52249124-52249143 | Msa0124450:CDS | 40.0% | |
| CATAAGCTTACTCGATTCCT+TGG | - | chr1_3:52249144-52249163 | None:intergenic | 40.0% | |
| GGAATCGAGTAAGCTTATGT+TGG | + | chr1_3:52249145-52249164 | Msa0124450:CDS | 40.0% | |
| ATCGAGTAAGCTTATGTTGG+AGG | + | chr1_3:52249148-52249167 | Msa0124450:CDS | 40.0% | |
| !!! | GTTTTGAAAAGAGGACCAAG+AGG | + | chr1_3:52249170-52249189 | Msa0124450:CDS | 40.0% |
| !! | TGGGGAGTTGATATCTGAAA+AGG | + | chr1_3:52249205-52249224 | Msa0124450:CDS | 40.0% |
| !! | GGGGAGTTGATATCTGAAAA+GGG | + | chr1_3:52249206-52249225 | Msa0124450:CDS | 40.0% |
| GTCGCAGAGCTTTCATTAAT+GGG | + | chr1_3:52249267-52249286 | Msa0124450:CDS | 40.0% | |
| TCGCAGAGCTTTCATTAATG+GGG | + | chr1_3:52249268-52249287 | Msa0124450:CDS | 40.0% | |
| AAAGAGTTTGGTCCCATCAA+TGG | - | chr1_3:52249317-52249336 | None:intergenic | 40.0% | |
| ACTTCAATAGCTTCTGCTTC+TGG | - | chr1_3:52249464-52249483 | None:intergenic | 40.0% | |
| ATAATGCCATGGGTGAAAAG+GGG | + | chr1_3:52249543-52249562 | Msa0124450:CDS | 40.0% | |
| !! | TTTGTGATTTAAGGAGTGCC+CGG | - | chr1_3:52249580-52249599 | None:intergenic | 40.0% |
| AAGAACCTTAAGCTTCTCAG+TGG | - | chr1_3:52249681-52249700 | None:intergenic | 40.0% | |
| CGTCTCCAGTCATGTTATTA+TGG | - | chr1_3:52249709-52249728 | None:intergenic | 40.0% | |
| AATAACATGACTGGAGACGA+AGG | + | chr1_3:52249710-52249729 | Msa0124450:CDS | 40.0% | |
| ACCGAAAATCTTCCAAAGCT+GGG | - | chr1_3:52249769-52249788 | None:intergenic | 40.0% | |
| GATTTGCGTGACAACATGTT+TGG | + | chr1_3:52249869-52249888 | Msa0124450:CDS | 40.0% | |
| ! | CTGGAAATTTTGGATATGGC+TGG | + | chr1_3:52250028-52250047 | Msa0124450:CDS | 40.0% |
| ! | GAATTGAAAGATGAAGGTGC+AGG | + | chr1_3:52250139-52250158 | Msa0124450:CDS | 40.0% |
| AGGTTTAATTAGTAAGGCGC+TGG | + | chr1_3:52250159-52250178 | Msa0124450:CDS | 40.0% | |
| !! | TTAATTAGTAAGGCGCTGGA+AGG | + | chr1_3:52250163-52250182 | Msa0124450:CDS | 40.0% |
| GCAACTTAAATCCAGGTTTC+TGG | - | chr1_3:52250270-52250289 | None:intergenic | 40.0% | |
| GCCAACTTCATTTCTGATGA+AGG | + | chr1_3:52250301-52250320 | Msa0124450:CDS | 40.0% | |
| CCCTTCATCAGAAATGAAGT+TGG | - | chr1_3:52250305-52250324 | None:intergenic | 40.0% | |
| TAAAAACTCACCTGACATGC+TGG | + | chr1_3:52250348-52250367 | Msa0124450:CDS | 40.0% | |
| AAAAACTCACCTGACATGCT+GGG | + | chr1_3:52250349-52250368 | Msa0124450:CDS | 40.0% | |
| TCAGGATCATTCTCATCCAA+AGG | - | chr1_3:52250376-52250395 | None:intergenic | 40.0% | |
| TTGGATGAGAATGATCCTGA+AGG | + | chr1_3:52250376-52250395 | Msa0124450:CDS | 40.0% | |
| GACTTGGAGTCAAAACTGAA+AGG | + | chr1_3:52250442-52250461 | Msa0124450:CDS | 40.0% | |
| CAAGACAAGAAATGGGCAAA+TGG | + | chr1_3:52250663-52250682 | Msa0124450:three_prime_UTR | 40.0% | |
| GGAAATGAATTGCCAGCAAA+AGG | - | chr1_3:52250721-52250740 | None:intergenic | 40.0% | |
| GACAGGAAAAAACGTGCAAC+CGG | - | chr1_3:52247374-52247393 | None:intergenic | 45.0% | |
| TTCCTGTCAAACAAACGTCC+AGG | + | chr1_3:52247386-52247405 | Msa0124450:intron | 45.0% | |
| GACCCCCTAAGTACATATTC+GGG | - | chr1_3:52247482-52247501 | None:intergenic | 45.0% | |
| AGGGGGTCTAAGAGATATAG+GGG | + | chr1_3:52247494-52247513 | Msa0124450:intron | 45.0% | |
| CGTCTATTTGGGCCTATACT+TGG | - | chr1_3:52247589-52247608 | None:intergenic | 45.0% | |
| AAGCGGAAAATCCACGCTTT+GGG | + | chr1_3:52247675-52247694 | Msa0124450:intron | 45.0% | |
| ! | AAGATATTTGGAAGCGTGCG+TGG | - | chr1_3:52247810-52247829 | None:intergenic | 45.0% |
| TGCGTTCTCATTTCTCACTC+AGG | + | chr1_3:52248013-52248032 | Msa0124450:intron | 45.0% | |
| CCTTGTTCAAATCAAGGGGA+CGG | - | chr1_3:52248415-52248434 | None:intergenic | 45.0% | |
| AAACTTGGTATCCAGTCCCA+AGG | + | chr1_3:52248559-52248578 | Msa0124450:intron | 45.0% | |
| GATTAATCAGTCCTTGGGAC+TGG | - | chr1_3:52248573-52248592 | None:intergenic | 45.0% | |
| CCCAAGGACTGATTAATCTG+AGG | + | chr1_3:52248575-52248594 | Msa0124450:intron | 45.0% | |
| CCCTCAGATTAATCAGTCCT+TGG | - | chr1_3:52248579-52248598 | None:intergenic | 45.0% | |
| TCAAATGGGACAACCACAAG+TGG | - | chr1_3:52248617-52248636 | None:intergenic | 45.0% | |
| ! | CTCTTGCTCTGGCTTCAAAT+GGG | - | chr1_3:52248631-52248650 | None:intergenic | 45.0% |
| AGCAAGAGCAAAGCTCTGTA+TGG | + | chr1_3:52248643-52248662 | Msa0124450:intron | 45.0% | |
| !!! | CTGTTTTTTAGGCACTGGTG+AGG | + | chr1_3:52248795-52248814 | Msa0124450:intron | 45.0% |
| AGTGTTCGATGTTGGTACGA+CGG | - | chr1_3:52248894-52248913 | None:intergenic | 45.0% | |
| !! | AACCTAGTACTCTGACTTGG+AGG | - | chr1_3:52248933-52248952 | None:intergenic | 45.0% |
| AGAAAATAGACGGAGTCGTC+AGG | - | chr1_3:52248983-52249002 | None:intergenic | 45.0% | |
| ! | TGCGACCCAACACTTTGAAA+AGG | + | chr1_3:52249079-52249098 | Msa0124450:CDS | 45.0% |
| ! | CAGGCTCCTTTTCAAAGTGT+TGG | - | chr1_3:52249088-52249107 | None:intergenic | 45.0% |
| ! | CACTTTGAAAAGGAGCCTGA+TGG | + | chr1_3:52249089-52249108 | Msa0124450:CDS | 45.0% |
| ! | AAAAGGAGCCTGATGGTGAT+GGG | + | chr1_3:52249096-52249115 | Msa0124450:CDS | 45.0% |
| CAAGAGGGAAGGAGGATAAT+GGG | + | chr1_3:52249186-52249205 | Msa0124450:CDS | 45.0% | |
| AAGAGGGAAGGAGGATAATG+GGG | + | chr1_3:52249187-52249206 | Msa0124450:CDS | 45.0% | |
| GGTCGCAGAGCTTTCATTAA+TGG | + | chr1_3:52249266-52249285 | Msa0124450:CDS | 45.0% | |
| CAGAGCTTTCATTAATGGGG+AGG | + | chr1_3:52249271-52249290 | Msa0124450:CDS | 45.0% | |
| CACCCATGGCATTATTTGAC+AGG | - | chr1_3:52249538-52249557 | None:intergenic | 45.0% | |
| TAATGCCATGGGTGAAAAGG+GGG | + | chr1_3:52249544-52249563 | Msa0124450:CDS | 45.0% | |
| ! | AAAAGGGGGTTAGAGCATTC+CGG | + | chr1_3:52249558-52249577 | Msa0124450:CDS | 45.0% |
| CCTTAAGCTTCTCAGTGGAA+GGG | - | chr1_3:52249676-52249695 | None:intergenic | 45.0% | |
| ACCTTAAGCTTCTCAGTGGA+AGG | - | chr1_3:52249677-52249696 | None:intergenic | 45.0% | |
| CCGAAAATCTTCCAAAGCTG+GGG | - | chr1_3:52249768-52249787 | None:intergenic | 45.0% | |
| !!! | CCCCAGCTTTGGAAGATTTT+CGG | + | chr1_3:52249765-52249784 | Msa0124450:CDS | 45.0% |
| CACCGAAAATCTTCCAAAGC+TGG | - | chr1_3:52249770-52249789 | None:intergenic | 45.0% | |
| !! | AACATGTTTGGTGTGGAAGC+TGG | + | chr1_3:52249881-52249900 | Msa0124450:CDS | 45.0% |
| AGCCCTTGCTAATGCTTTGA+AGG | + | chr1_3:52249991-52250010 | Msa0124450:CDS | 45.0% | |
| ! | TGCACCGTCACTGGAAATTT+TGG | + | chr1_3:52250018-52250037 | Msa0124450:CDS | 45.0% |
| TGAGAATGATCCTGAAGGAG+AGG | + | chr1_3:52250381-52250400 | Msa0124450:CDS | 45.0% | |
| CTCCTGGACGTTTGTTTGAC+AGG | - | chr1_3:52247391-52247410 | None:intergenic | 50.0% | |
| GGGGGTCTAAGAGATATAGG+GGG | + | chr1_3:52247495-52247514 | Msa0124450:intron | 50.0% | |
| TTGGGCCTATACTTGGGCTT+TGG | - | chr1_3:52247582-52247601 | None:intergenic | 50.0% | |
| GAAGCGGAAAATCCACGCTT+TGG | + | chr1_3:52247674-52247693 | Msa0124450:intron | 50.0% | |
| TTCCCCGCTCCAGCATAAAA+AGG | + | chr1_3:52247877-52247896 | Msa0124450:intron | 50.0% | |
| ! | AGCCTTTTTATGCTGGAGCG+GGG | - | chr1_3:52247882-52247901 | None:intergenic | 50.0% |
| ! | GAGCCTTTTTATGCTGGAGC+GGG | - | chr1_3:52247883-52247902 | None:intergenic | 50.0% |
| ! | GGAGCCTTTTTATGCTGGAG+CGG | - | chr1_3:52247884-52247903 | None:intergenic | 50.0% |
| ! | CCGTCCCCTTGATTTGAACA+AGG | + | chr1_3:52248412-52248431 | Msa0124450:intron | 50.0% |
| GACAACCACAAGTGGACAGT+GGG | - | chr1_3:52248609-52248628 | None:intergenic | 50.0% | |
| ! | GCTCTTGCTCTGGCTTCAAA+TGG | - | chr1_3:52248632-52248651 | None:intergenic | 50.0% |
| ACAGAGCTTTGCTCTTGCTC+TGG | - | chr1_3:52248642-52248661 | None:intergenic | 50.0% | |
| TGAGGCTGAGAAGGATGCAA+AGG | + | chr1_3:52249031-52249050 | Msa0124450:CDS | 50.0% | |
| ! | GAAAAGGAGCCTGATGGTGA+TGG | + | chr1_3:52249095-52249114 | Msa0124450:CDS | 50.0% |
| GAAAAGAGGACCAAGAGGGA+AGG | + | chr1_3:52249175-52249194 | Msa0124450:CDS | 50.0% | |
| CCATTATCCTCCTTCCCTCT+TGG | - | chr1_3:52249188-52249207 | None:intergenic | 50.0% | |
| CCAAGAGGGAAGGAGGATAA+TGG | + | chr1_3:52249185-52249204 | Msa0124450:CDS | 50.0% | |
| ! | TCTAACCCCCTTTTCACCCA+TGG | - | chr1_3:52249552-52249571 | None:intergenic | 50.0% |
| ! | AAAGGGGGTTAGAGCATTCC+GGG | + | chr1_3:52249559-52249578 | Msa0124450:CDS | 50.0% |
| CCCTTCCACTGAGAAGCTTA+AGG | + | chr1_3:52249673-52249692 | Msa0124450:CDS | 50.0% | |
| TGTGAAACGTTCCCCAGCTT+TGG | + | chr1_3:52249754-52249773 | Msa0124450:CDS | 50.0% | |
| CGGTGTTCATCTACCAGAGT+AGG | + | chr1_3:52249785-52249804 | Msa0124450:CDS | 50.0% | |
| ! | TCTACCAGAGTAGGCTCTGA+AGG | + | chr1_3:52249794-52249813 | Msa0124450:CDS | 50.0% |
| ! | TTGCTCTTGCTGAAGCGCTT+GGG | + | chr1_3:52249822-52249841 | Msa0124450:CDS | 50.0% |
| ! | GCGTGACAACATGTTTGGTG+TGG | + | chr1_3:52249874-52249893 | Msa0124450:CDS | 50.0% |
| AACAGCTTCTGCCAACAGCT+TGG | - | chr1_3:52250245-52250264 | None:intergenic | 50.0% | |
| GAAGCTGTTGTCCAGAAACC+TGG | + | chr1_3:52250256-52250275 | Msa0124450:CDS | 50.0% | |
| TCATCAACGTCCTCTCCTTC+AGG | - | chr1_3:52250394-52250413 | None:intergenic | 50.0% | |
| ! | AGGAGAGGACGTTGATGAAG+AGG | + | chr1_3:52250396-52250415 | Msa0124450:CDS | 50.0% |
| ! | GGGCTTATTGTGCCTTTTGC+TGG | + | chr1_3:52250706-52250725 | Msa0124450:three_prime_UTR | 50.0% |
| GCGTGCGTGGAAAAACTGGA+GGG | - | chr1_3:52247797-52247816 | None:intergenic | 55.0% | |
| AGCGTGCGTGGAAAAACTGG+AGG | - | chr1_3:52247798-52247817 | None:intergenic | 55.0% | |
| ! | GGAAGCGTGCGTGGAAAAAC+TGG | - | chr1_3:52247801-52247820 | None:intergenic | 55.0% |
| CCACAAGTGGACAGTGGGAT+TGG | - | chr1_3:52248604-52248623 | None:intergenic | 55.0% | |
| CCAATCCCACTGTCCACTTG+TGG | + | chr1_3:52248601-52248620 | Msa0124450:intron | 55.0% | |
| GGACAACCACAAGTGGACAG+TGG | - | chr1_3:52248610-52248629 | None:intergenic | 55.0% | |
| ! | GGCCTCCAAGTCAGAGTACT+AGG | + | chr1_3:52248928-52248947 | Msa0124450:CDS | 55.0% |
| GCAGAACTCCCATCACCATC+AGG | - | chr1_3:52249107-52249126 | None:intergenic | 55.0% | |
| AAGAGGACCAAGAGGGAAGG+AGG | + | chr1_3:52249178-52249197 | Msa0124450:CDS | 55.0% | |
| !! | ACCAGAGTAGGCTCTGAAGG+TGG | + | chr1_3:52249797-52249816 | Msa0124450:CDS | 55.0% |
| ACCACCTTCAGAGCCTACTC+TGG | - | chr1_3:52249801-52249820 | None:intergenic | 55.0% | |
| ! | GTTGCTCTTGCTGAAGCGCT+TGG | + | chr1_3:52249821-52249840 | Msa0124450:CDS | 55.0% |
| ! | TGCTCTTGCTGAAGCGCTTG+GGG | + | chr1_3:52249823-52249842 | Msa0124450:CDS | 55.0% |
| GAAGGAATCTGCACCGTCAC+TGG | + | chr1_3:52250009-52250028 | Msa0124450:CDS | 55.0% | |
| ! | ATGGTCTGGAGCCAAGCTGT+TGG | + | chr1_3:52250231-52250250 | Msa0124450:CDS | 55.0% |
| ACCTGACATGCTGGGTCCTT+TGG | + | chr1_3:52250357-52250376 | Msa0124450:CDS | 55.0% | |
| TCCAAAGGACCCAGCATGTC+AGG | - | chr1_3:52250361-52250380 | None:intergenic | 55.0% | |
| !! | AGTAAGGCGCTGGAAGGTCG+TGG | + | chr1_3:52250169-52250188 | Msa0124450:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 52247291 | 52250756 | 52247291 | ID=Msa0124450;Name=Msa0124450 |
| chr1_3 | mRNA | 52247291 | 52250756 | 52247291 | ID=Msa0124450-mRNA-1;Parent=Msa0124450;Name=Msa0124450-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0|0.5|0.5|1|1|2|279|538 |
| chr1_3 | exon | 52247291 | 52247294 | 52247291 | ID=Msa0124450-mRNA-1:exon:15992;Parent=Msa0124450-mRNA-1 |
| chr1_3 | exon | 52248865 | 52250756 | 52248865 | ID=Msa0124450-mRNA-1:exon:15993;Parent=Msa0124450-mRNA-1 |
| chr1_3 | CDS | 52247291 | 52247294 | 52247291 | ID=Msa0124450-mRNA-1:cds;Parent=Msa0124450-mRNA-1 |
| chr1_3 | CDS | 52248865 | 52250477 | 52248865 | ID=Msa0124450-mRNA-1:cds;Parent=Msa0124450-mRNA-1 |
| chr1_3 | three_prime_UTR | 52250478 | 52250756 | 52250478 | ID=Msa0124450-mRNA-1:three_prime_utr;Parent=Msa0124450-mRNA-1 |
| Gene Sequence |
| Protein sequence |
