AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0269740

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0269740 MtrunA17_Chr1g0183071 98.654 743 10 0 1 743 1 743 0.0 1518
Msa0269740 MtrunA17_Chr7g0262511 66.667 783 179 11 22 743 10 771 0.0 995
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0269740 AT1G04140.1 54.293 757 297 12 29 741 32 783 0.0 771
Msa0269740 AT1G04140.2 54.222 758 298 12 29 742 32 784 0.0 770
Msa0269740 AT5G43930.2 55.850 718 273 11 28 729 34 723 0.0 746
Msa0269740 AT5G43930.3 55.850 718 273 11 28 729 34 723 0.0 746
Msa0269740 AT5G43930.1 55.850 718 273 11 28 729 34 723 0.0 746
Msa0269740 AT5G43930.4 53.898 744 273 13 28 729 34 749 0.0 728
Msa0269740 AT3G49660.1 28.571 182 116 7 105 277 78 254 3.82e-12 68.6

Find 223 sgRNAs with CRISPR-Local

Find 499 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTTTACCTGTAACTGATTT+TGG 0.115003 2_3:-756841 Msa0269740:CDS
TTGGTTCTTGATTGAATTTA+TGG 0.164239 2_3:+760642 None:intergenic
CATACCTGGTGTTGGAATTC+TGG 0.178980 2_3:+760516 None:intergenic
TTTCGTACATGCTTGTTTCT+AGG 0.214459 2_3:+759620 None:intergenic
TGGACCAAGAAGTTCGTTTA+TGG 0.217778 2_3:-758097 Msa0269740:CDS
AGAACTAGAAGAATCGAATT+TGG 0.268634 2_3:+760794 None:intergenic
GACCGTGGGGCAGGCAATAA+AGG 0.268914 2_3:+759331 None:intergenic
AAGGATCAAATCTGAGAAAT+TGG 0.269191 2_3:+760623 None:intergenic
TCACCCTTTCCTTCTGCTCT+TGG 0.281689 2_3:-753696 Msa0269740:three_prime_UTR
TATATCATGTGTCCTGAAAA+TGG 0.283329 2_3:+753629 None:intergenic
AAGATCATTGATTGTGAAAC+TGG 0.287636 2_3:-759152 Msa0269740:CDS
ATATCTATATATTGGTGTTT+AGG 0.299581 2_3:+760748 None:intergenic
GAACTAGAAGAATCGAATTT+GGG 0.304768 2_3:+760795 None:intergenic
CTGAAAAGCATTGTCATTGA+TGG 0.314557 2_3:-754689 Msa0269740:CDS
GAGCTAGCTGTGCCACCTTC+AGG 0.320449 2_3:-756931 Msa0269740:CDS
GATACTTGCTAGTGGGAGTT+TGG 0.320714 2_3:-758117 Msa0269740:CDS
AGCTGCAGTGGCCACTGATT+TGG 0.321943 2_3:+756738 None:intergenic
TTTGATTAGGCAAAGTAGTA+TGG 0.323889 2_3:+757238 None:intergenic
CTCTCTCTATATCTATATAT+TGG 0.325950 2_3:+760740 None:intergenic
ATGCCAATTCTCATTTGATT+AGG 0.329540 2_3:+757225 None:intergenic
GCACTGTTAACTTAAAAGTA+TGG 0.343310 2_3:-756699 Msa0269740:CDS
TGACTGGATTCGATTTATAA+TGG 0.347676 2_3:+756768 None:intergenic
CATCCCATAAACGAACTTCT+TGG 0.352429 2_3:+758093 None:intergenic
GGACCAAGAAGTTCGTTTAT+GGG 0.353088 2_3:-758096 Msa0269740:CDS
CAACTGTGTTTGCAGTGAAA+TGG 0.357749 2_3:-756366 Msa0269740:intron
AGGCAATGAGCAGCTCTAAT+TGG 0.358191 2_3:+756016 None:intergenic
TGACATGTTGATCTGCGTCC+TGG 0.364210 2_3:+757404 None:intergenic
CTCTCGCTTTCCATGCCAAT+GGG 0.366859 2_3:-757912 Msa0269740:CDS
TTGCCTAATCAAATGAGAAT+TGG 0.367098 2_3:-757228 Msa0269740:CDS
CAAAATCAGTTACAGGTAAA+CGG 0.375548 2_3:+756842 None:intergenic
ATACCTGGTGTTGGAATTCT+GGG 0.377546 2_3:+760517 None:intergenic
TATCAGATATGGAACTTGTC+AGG 0.380466 2_3:-754066 Msa0269740:CDS
CATTACAAGTACGGTCAAAC+TGG 0.380771 2_3:+753866 None:intergenic
CTGATTTGGCAAGTTCTGAC+TGG 0.382442 2_3:+756752 None:intergenic
GAATCTTCTGAATCAAAATC+TGG 0.390715 2_3:-759584 Msa0269740:CDS
GTTGGAATTCTGGGAGGATG+AGG 0.392412 2_3:+760526 None:intergenic
TTCCCTGAGGAGAACATGAT+TGG 0.394808 2_3:-753820 Msa0269740:CDS
GGATTCGATTTATAATGGTT+TGG 0.398188 2_3:+756773 None:intergenic
GAAATAATTGCTGTTGCATC+AGG 0.399592 2_3:-757889 Msa0269740:CDS
GTTCCGTCACCAGATTCTAA+TGG 0.400356 2_3:-757075 Msa0269740:CDS
ACCTGAGCAGTTAAAAGATA+TGG 0.402129 2_3:+757626 None:intergenic
TCATGTTGGCTTGCTTCGGC+TGG 0.407111 2_3:+757159 None:intergenic
AGATTGCCAAAATCAGTTAC+AGG 0.408627 2_3:+756835 None:intergenic
ACAAAGTTTCTCTCTCTCTA+AGG 0.420690 2_3:+760705 None:intergenic
CCTGGATCAGCTTCCATATG+AGG 0.422073 2_3:+756287 None:intergenic
ATTACTTGATGTGCTGAGAT+TGG 0.422477 2_3:+756209 None:intergenic
CCTCATATGGAAGCTGATCC+AGG 0.426677 2_3:-756287 Msa0269740:CDS
GGTATATAGAGTATCAGATA+TGG 0.427126 2_3:-754077 Msa0269740:CDS
TCTAGTTGTACTTTGAATCA+AGG 0.429970 2_3:+760913 None:intergenic
GCATCTTTGTAGTGGGGCGC+AGG 0.430270 2_3:+756657 None:intergenic
TCTATTAATTTGCCGCATGA+TGG 0.442110 2_3:-756805 Msa0269740:CDS
AACTGTGTTTGCAGTGAAAT+GGG 0.443834 2_3:-756365 Msa0269740:intron
ACTCCAATCATGTTCTCCTC+AGG 0.445874 2_3:+753817 None:intergenic
TTGGAATTCTGGGAGGATGA+GGG 0.446295 2_3:+760527 None:intergenic
CAAACCGGAGCAGAATATAA+TGG 0.448038 2_3:-757261 Msa0269740:CDS
CAAGAAAGGTTTCTATATCA+TGG 0.453405 2_3:-753652 Msa0269740:three_prime_UTR
TCATGCGGCAAATTAATAGA+AGG 0.456728 2_3:+756808 None:intergenic
AGCATGTACGAAAGTGTCAC+TGG 0.459638 2_3:-759610 Msa0269740:CDS
TGCATGTATGCACCCTCATA+TGG 0.459866 2_3:-756300 Msa0269740:CDS
CGCGTTGAACTCTCTGAGCT+TGG 0.460612 2_3:-757114 Msa0269740:CDS
CTTGTCTTCAACACAAATAC+TGG 0.462774 2_3:+757689 None:intergenic
AAAATCAGTTACAGGTAAAC+GGG 0.463268 2_3:+756843 None:intergenic
GAAGACAAGGCGCTCGCTAC+GGG 0.464062 2_3:-757675 Msa0269740:CDS
ATCTGTTGAGGAAGCATTGA+GGG 0.465688 2_3:+756997 None:intergenic
AGCTCCCATCCATTAGAATC+TGG 0.465836 2_3:+757066 None:intergenic
AATTGCTTGAAGGTATTAGT+TGG 0.468045 2_3:-759128 Msa0269740:CDS
TGTACAAGAGTTTGTAATCC+TGG 0.469949 2_3:+756269 None:intergenic
GGATGTCGAGTTGGTGATGT+TGG 0.470361 2_3:+756230 None:intergenic
AATGTGAATGGCACTGGATC+TGG 0.470886 2_3:-753847 Msa0269740:CDS
TGGAAAGCGAGAGATGCAAT+AGG 0.471210 2_3:+757922 None:intergenic
TCAATGCTTCCTCAACAGAT+TGG 0.475654 2_3:-756994 Msa0269740:CDS
AGTCGTACGTTGCTTCCTCC+AGG 0.477811 2_3:+756165 None:intergenic
TTGAACAGTCAAAGCAAGAA+AGG 0.478577 2_3:-753666 Msa0269740:three_prime_UTR
TGAGCTCCGGATATATTCCC+TGG 0.480311 2_3:-756183 Msa0269740:CDS
GGTTGTAGGAAGGAAAGCTT+AGG 0.485120 2_3:-753894 Msa0269740:intron
CTATTAATTTGCCGCATGAT+GGG 0.485445 2_3:-756804 Msa0269740:CDS
ACCGTGGGGCAGGCAATAAA+GGG 0.486720 2_3:+759332 None:intergenic
CTTCCTCCAGGGAATATATC+CGG 0.487419 2_3:+756177 None:intergenic
AAATTTGATTTCCAGGGTCG+AGG 0.494344 2_3:-759389 Msa0269740:intron
TCATTGCCTGACTTCAATCC+AGG 0.496863 2_3:-756002 Msa0269740:intron
AACTGACCTGGATTGAAGTC+AGG 0.498949 2_3:+755996 None:intergenic
GACATGTTGATCTGCGTCCT+GGG 0.499424 2_3:+757405 None:intergenic
GGAAAATTCATACCTGGTGT+TGG 0.500969 2_3:+760508 None:intergenic
ATCATCAATATATACAGTCT+TGG 0.501445 2_3:-754657 Msa0269740:CDS
ATCAAGTAATGTATGAGCTC+CGG 0.501752 2_3:-756196 Msa0269740:CDS
ATGTTGGAAGTCCAGGCTCC+TGG 0.502548 2_3:+756246 None:intergenic
AGGCAATAAAGGGCAATACT+TGG 0.503801 2_3:+759342 None:intergenic
ATGAAGTTCCGCTGATTCCA+TGG 0.504022 2_3:+760568 None:intergenic
GTTGGTGATGTTGGAAGTCC+AGG 0.505185 2_3:+756239 None:intergenic
GGCATCAATAACCTCACAAT+GGG 0.506104 2_3:-757207 Msa0269740:CDS
GAATTGAGATTAAAGAAAGA+AGG 0.506659 2_3:+760604 None:intergenic
TTGGTGTTTAGGAGGAATAA+CGG 0.507182 2_3:+760759 None:intergenic
GCCCTTTATTGCCTGCCCCA+CGG 0.507234 2_3:-759333 Msa0269740:CDS
AACAGCAATTATTTCCCCAT+TGG 0.507326 2_3:+757897 None:intergenic
GAGCATATTCTGCTCGCCTA+TGG 0.507585 2_3:-754731 Msa0269740:CDS
ACTAACCATCCTTGCAGAAA+AGG 0.507866 2_3:+757042 None:intergenic
CAAAGTGTGGTCTCCTCTCA+TGG 0.508856 2_3:-759532 Msa0269740:intron
TGAAGACAAGGCGCTCGCTA+CGG 0.509890 2_3:-757676 Msa0269740:CDS
TGCAGGTATGCTGATGCCAT+TGG 0.509948 2_3:+756903 None:intergenic
CAATTATTTCCCCATTGGCA+TGG 0.510982 2_3:+757902 None:intergenic
TTGGCCACAGAAGGACGCCT+TGG 0.512523 2_3:-759109 Msa0269740:CDS
TGGCCACAGAAGGACGCCTT+GGG 0.514365 2_3:-759108 Msa0269740:CDS
TCTATATATTGGTGTTTAGG+AGG 0.517216 2_3:+760751 None:intergenic
TGTTTCGTTAACAACACAAA+CGG 0.517284 2_3:-760671 Msa0269740:five_prime_UTR
GCTTTCTAGTGCAGAGGATG+AGG 0.517539 2_3:-754041 Msa0269740:CDS
ACTCTTGTACACCAGGAGCC+TGG 0.517642 2_3:-756257 Msa0269740:CDS
AGAGCTATGACGTCGACCAT+AGG 0.518312 2_3:+754715 None:intergenic
TCTCTCGCTTTCCATGCCAA+TGG 0.519282 2_3:-757913 Msa0269740:CDS
GACCGTACTTGTAATGTGAA+TGG 0.523270 2_3:-753859 Msa0269740:CDS
TAACCAAGAGCAGAAGGAAA+GGG 0.524017 2_3:+753693 None:intergenic
GGAAAGCGAGAGATGCAATA+GGG 0.526031 2_3:+757923 None:intergenic
CGTCACCAGATTCTAATGGA+TGG 0.526206 2_3:-757071 Msa0269740:CDS
CAGCATGCTAGTAACGATGT+TGG 0.526306 2_3:-757351 Msa0269740:CDS
TCTTTAATCTCAATTCTCCA+TGG 0.526509 2_3:-760597 Msa0269740:exon
TTAGACGGCATCTTTGTAGT+GGG 0.528947 2_3:+756650 None:intergenic
AATAATTAACCAAGAGCAGA+AGG 0.530368 2_3:+753687 None:intergenic
TAACCTCACAATGGGTGGTA+GGG 0.531061 2_3:-757199 Msa0269740:CDS
GTATCTGTCGTTGCAATGGA+TGG 0.531769 2_3:+758135 None:intergenic
GCAATAGTAGACCGTGGGGC+AGG 0.533067 2_3:+759322 None:intergenic
TTGTCACAAATGTTCATCCC+AGG 0.536231 2_3:-757422 Msa0269740:CDS
TGCTCCGGTTTGAGAGCTAG+TGG 0.536252 2_3:+757272 None:intergenic
ATCAATATATACAGTCTTGG+AGG 0.536387 2_3:-754654 Msa0269740:intron
TACCACATGTCGTCCTCTGC+AGG 0.539111 2_3:-756624 Msa0269740:intron
GCTGCAGCATTTAGTCCAGA+TGG 0.539276 2_3:-759301 Msa0269740:CDS
TGAAACTGGAAATTGCTTGA+AGG 0.539434 2_3:-759138 Msa0269740:CDS
AGGTATTAGTTGGCCACAGA+AGG 0.539720 2_3:-759118 Msa0269740:CDS
TTGGTGGTGAACAGATTAGA+TGG 0.541889 2_3:+756958 None:intergenic
ATGGCCATTATATTCTGCTC+CGG 0.541908 2_3:+757257 None:intergenic
CCACCCAAGGCGTCCTTCTG+TGG 0.544228 2_3:+759105 None:intergenic
ACTTGTAATGTGAATGGCAC+TGG 0.544885 2_3:-753853 Msa0269740:CDS
GCAGGTATGCTGATGCCATT+GGG 0.544979 2_3:+756904 None:intergenic
CACAGCTAGCTCAACATTGG+TGG 0.546180 2_3:+756942 None:intergenic
AAAGATATGGTGCCCCATGC+GGG 0.547922 2_3:+757639 None:intergenic
TTGAGAGCTAGTGGGTATCT+CGG 0.549485 2_3:+757281 None:intergenic
GCAAGTATCTGTCGTTGCAA+TGG 0.550367 2_3:+758131 None:intergenic
ATGACAGAGGCAACATCTCA+TGG 0.552996 2_3:-757474 Msa0269740:CDS
ATCAATAACCTCACAATGGG+TGG 0.553944 2_3:-757204 Msa0269740:CDS
CAGGGTGCTTTCTAGTGCAG+AGG 0.555084 2_3:-754047 Msa0269740:CDS
ATATAGAGAGAGAAAGAAAG+AGG 0.555174 2_3:-760729 Msa0269740:five_prime_UTR
ATAACCTCACAATGGGTGGT+AGG 0.558003 2_3:-757200 Msa0269740:CDS
GTCACCAGATTCTAATGGAT+GGG 0.560045 2_3:-757070 Msa0269740:CDS
TTAACCAAGAGCAGAAGGAA+AGG 0.561620 2_3:+753692 None:intergenic
GCATTGAGGGAACACCAACT+TGG 0.562253 2_3:+757010 None:intergenic
AAGTTACATGTGAAAATGTA+AGG 0.563802 2_3:-753591 Msa0269740:three_prime_UTR
AAGATGATGACGTGGCGTCT+AGG 0.564253 2_3:+760863 None:intergenic
CATCTTTGTAGTGGGGCGCA+GGG 0.564972 2_3:+756658 None:intergenic
GTTAGACGGCATCTTTGTAG+TGG 0.565047 2_3:+756649 None:intergenic
CAGTATTTGTGTTGAAGACA+AGG 0.566784 2_3:-757688 Msa0269740:CDS
TGCCATTCACATTACAAGTA+CGG 0.568037 2_3:+753857 None:intergenic
TTTCTGCAAGGATGGTTAGT+CGG 0.570950 2_3:-757039 Msa0269740:CDS
CTCCAATCATGTTCTCCTCA+GGG 0.571222 2_3:+753818 None:intergenic
ATGCCATTGGGCATTCCTGA+AGG 0.574190 2_3:+756916 None:intergenic
CTGCAGCATTTAGTCCAGAT+GGG 0.574217 2_3:-759300 Msa0269740:CDS
AAGCCAAAGCTTACCACCCA+AGG 0.576210 2_3:+759092 None:intergenic
AAACCTGATTGTAAAACTGC+AGG 0.577206 2_3:+756886 None:intergenic
ATCAAGGACATGGATGATGT+TGG 0.581941 2_3:+760929 None:intergenic
ATACCCACTAGCTCTCAAAC+CGG 0.582499 2_3:-757276 Msa0269740:CDS
CTGTTCTCGTTCTAGAACAG+TGG 0.583294 2_3:-759561 Msa0269740:CDS
CTGCAGCAATAGTAGACCGT+GGG 0.583872 2_3:+759317 None:intergenic
TGCTGTTGCATCAGGTCACA+AGG 0.586241 2_3:-757881 Msa0269740:intron
GTGAAAGAACCAATCTGTTG+AGG 0.587730 2_3:+756985 None:intergenic
CTGGATCAGCTTCCATATGA+GGG 0.589361 2_3:+756288 None:intergenic
TGATTCCATGGAAAATTCCA+TGG 0.590591 2_3:+760580 None:intergenic
TGTTGGTTTGAGTAGCATGC+AGG 0.590711 2_3:-757334 Msa0269740:CDS
AATTCAACTCTTGACACTGG+TGG 0.591913 2_3:+757375 None:intergenic
TAATTCTGTAGCAGCTGCAG+TGG 0.593424 2_3:+756726 None:intergenic
GCTCCGGTTTGAGAGCTAGT+GGG 0.596135 2_3:+757273 None:intergenic
TCTGGTGACGGAACAATCTG+AGG 0.598901 2_3:+757084 None:intergenic
CCTCCCAGAATTCCAACACC+AGG 0.599555 2_3:-760520 Msa0269740:intron
CGACATGTGGTATAGTTAGA+CGG 0.600026 2_3:+756635 None:intergenic
ATCAGATATGGAACTTGTCA+GGG 0.600976 2_3:-754065 Msa0269740:CDS
AAAAGATATGGTGCCCCATG+CGG 0.601223 2_3:+757638 None:intergenic
GTCGTACGTTGCTTCCTCCA+GGG 0.604411 2_3:+756166 None:intergenic
CCTCACAATGGGTGGTAGGG+AGG 0.605498 2_3:-757196 Msa0269740:CDS
AGCAGAATATGCTCAGATGT+AGG 0.609510 2_3:+754740 None:intergenic
ATTACAAACTCTTGTACACC+AGG 0.610235 2_3:-756264 Msa0269740:CDS
TCATTTAGAATATCCTCCAC+CGG 0.610636 2_3:-757451 Msa0269740:CDS
CAAGTATGTTGTACATTATG+CGG 0.612352 2_3:-753535 Msa0269740:three_prime_UTR
TAGAAGAATCGAATTTGGGG+TGG 0.616324 2_3:+760799 None:intergenic
AGCATGCAGGTTGAACAATA+CGG 0.618359 2_3:-757321 Msa0269740:CDS
CCACAGAAGGACGCCTTGGG+TGG 0.618769 2_3:-759105 Msa0269740:intron
GCATGTACGAAAGTGTCACT+GGG 0.618857 2_3:-759609 Msa0269740:CDS
CCACCTTCAGGAATGCCCAA+TGG 0.620224 2_3:-756919 Msa0269740:CDS
TGTACTTTGAATCAAGGACA+TGG 0.621389 2_3:+760919 None:intergenic
GTCAGAACTTGCCAAATCAG+TGG 0.622712 2_3:-756749 Msa0269740:CDS
TGGCACAGCTAGCTCAACAT+TGG 0.624707 2_3:+756939 None:intergenic
AATCTGTTGAGGAAGCATTG+AGG 0.627493 2_3:+756996 None:intergenic
CCATTGGGCATTCCTGAAGG+TGG 0.630429 2_3:+756919 None:intergenic
TGGCATCAATAACCTCACAA+TGG 0.635026 2_3:-757208 Msa0269740:CDS
TCAGTTACAGGTAAACGGGA+TGG 0.636538 2_3:+756847 None:intergenic
AACGACAGATACTTGCTAGT+GGG 0.637390 2_3:-758124 Msa0269740:CDS
GCTGAGATTGGATGTCGAGT+TGG 0.638438 2_3:+756221 None:intergenic
CAACGACAGATACTTGCTAG+TGG 0.639744 2_3:-758125 Msa0269740:CDS
TGCAATTCAACTCTTGACAC+TGG 0.641673 2_3:+757372 None:intergenic
TTCAGATTGCTCAATGACAG+AGG 0.641679 2_3:-757487 Msa0269740:CDS
ACTTCAGAAGGTACCTGCAG+AGG 0.645206 2_3:+756611 None:intergenic
AACTAGAAGAATCGAATTTG+GGG 0.645970 2_3:+760796 None:intergenic
AGTTGTGTAAGTACCATGAG+AGG 0.649049 2_3:+759519 None:intergenic
TACTGTGTCAGTTGTACGTG+TGG 0.650194 2_3:-757742 Msa0269740:intron
TAGACGGCATCTTTGTAGTG+GGG 0.650831 2_3:+756651 None:intergenic
AATTGCAACTTACTGTGTGG+AGG 0.655631 2_3:+759267 None:intergenic
GTTGTAGGAAGGAAAGCTTA+GGG 0.656714 2_3:-753893 Msa0269740:intron
CCTCCCTACCACCCATTGTG+AGG 0.659125 2_3:+757196 None:intergenic
TTGGAGTCGATCAATGAGCA+AGG 0.667619 2_3:-753801 Msa0269740:exon
CATCCATTAGAATCTGGTGA+CGG 0.670518 2_3:+757072 None:intergenic
TTAGTCGGTCAAAGCCAAGT+TGG 0.670959 2_3:-757024 Msa0269740:CDS
TACCTGCAGAGGACGACATG+TGG 0.671719 2_3:+756622 None:intergenic
TGCAGAGGATGAGGTCAATG+TGG 0.674617 2_3:-754032 Msa0269740:CDS
GCTGCAGCAATAGTAGACCG+TGG 0.674851 2_3:+759316 None:intergenic
AGGGTGCATACATGCAACAC+AGG 0.677223 2_3:+756307 None:intergenic
TGGCTATCAAACCCATCATG+CGG 0.678387 2_3:+756793 None:intergenic
GTGCATACATGCAACACAGG+CGG 0.681773 2_3:+756310 None:intergenic
TCTCGCTTTCCATGCCAATG+GGG 0.682220 2_3:-757911 Msa0269740:CDS
AATCAATGATCTTAACTGTG+TGG 0.684417 2_3:+759162 None:intergenic
AGGGCTTGTCTATGGAACCA+AGG 0.695022 2_3:-753984 Msa0269740:intron
GGGATGCTAGCTCATCAGAG+TGG 0.698330 2_3:-758076 Msa0269740:CDS
TGGATCTGGTTACTTCCCTG+AGG 0.705098 2_3:-753833 Msa0269740:CDS
ACAGTGGTAGATGCAAAGTG+TGG 0.719121 2_3:-759545 Msa0269740:CDS
TGCAGCAATAGTAGACCGTG+GGG 0.726709 2_3:+759318 None:intergenic
GAGGGTTGATCATGACACAG+AGG 0.745622 2_3:+760545 None:intergenic
GCTCCGGATATATTCCCTGG+AGG 0.749636 2_3:-756180 Msa0269740:CDS
CCTGGTGTTGGAATTCTGGG+AGG 0.755260 2_3:+760520 None:intergenic
CATGTACGAAAGTGTCACTG+GGG 0.771233 2_3:-759608 Msa0269740:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATTTTTATTTTTAAATT+TGG - chr2_3:754781-754800 Msa0269740:intron 0.0%
!!! TTATTTTTATTTTTAAATTT+GGG - chr2_3:754782-754801 Msa0269740:intron 0.0%
!! TATAATCTCTATATAATTAT+TGG - chr2_3:760185-760204 Msa0269740:intron 10.0%
!!! GATAATTTTCAAAAGTTTTT+GGG + chr2_3:753648-753667 None:intergenic 15.0%
!!! AGATAATTTTCAAAAGTTTT+TGG + chr2_3:753649-753668 None:intergenic 15.0%
!! ACAACTTAAAAAAAATACTT+AGG + chr2_3:754104-754123 None:intergenic 15.0%
!! AATAACCACATAATTATTTA+GGG + chr2_3:754213-754232 None:intergenic 15.0%
!! TAATAACCACATAATTATTT+AGG + chr2_3:754214-754233 None:intergenic 15.0%
!! AAAATTACTTCAAAATACTT+AGG + chr2_3:754299-754318 None:intergenic 15.0%
!!! ATCATTTTTTACAAGTTAAT+TGG - chr2_3:754407-754426 Msa0269740:intron 15.0%
!!! TCATTTTTTACAAGTTAATT+GGG - chr2_3:754408-754427 Msa0269740:intron 15.0%
!! TAAAAATAAAAAATCATGTG+AGG + chr2_3:754771-754790 None:intergenic 15.0%
!!! ATTTTTAAATTTGATTTCCA+GGG - chr2_3:755076-755095 Msa0269740:intron 15.0%
!! ATATAAAACTATTATTCACT+TGG + chr2_3:755476-755495 None:intergenic 15.0%
!!! TATTTTGTTTAATTGTGATT+TGG - chr2_3:756700-756719 Msa0269740:CDS 15.0%
!!! CTATAAAAACTATTACTTTT+TGG - chr2_3:756906-756925 Msa0269740:CDS 15.0%
!!! ATAAATTTTAATGATATGCT+TGG + chr2_3:758388-758407 None:intergenic 15.0%
!!! TGAATACATTATTCTTTTTT+TGG - chr2_3:758554-758573 Msa0269740:intron 15.0%
!!! GAATACATTATTCTTTTTTT+GGG - chr2_3:758555-758574 Msa0269740:intron 15.0%
!!! CTCTTTTTTATTTTATTTTG+AGG + chr2_3:758630-758649 None:intergenic 15.0%
!! CTCAAAATAAAATAAAAAAG+AGG - chr2_3:758628-758647 Msa0269740:intron 15.0%
!! TTCAAAAATTTAAAGGTTTA+AGG + chr2_3:758726-758745 None:intergenic 15.0%
!! AAAATAGAAATATGATTATG+AGG + chr2_3:759301-759320 None:intergenic 15.0%
!! AAAATAGAAATATGATTATG+AGG + chr2_3:759301-759320 None:intergenic 15.0%
!!! AATCAAAAAATTACTTTTCT+TGG - chr2_3:759666-759685 Msa0269740:CDS 15.0%
!!! AATGCACTTATTTTTTTTTA+TGG - chr2_3:760062-760081 Msa0269740:intron 15.0%
!!! ATGCACTTATTTTTTTTTAT+GGG - chr2_3:760063-760082 Msa0269740:intron 15.0%
!!! ATTTTAATTTTATTTTCCTG+TGG - chr2_3:760737-760756 Msa0269740:five_prime_UTR 15.0%
!!! ATATCTATATATTGGTGTTT+AGG + chr2_3:753726-753745 None:intergenic 20.0%
!! GAATATTAACAAAGAAGATA+TGG + chr2_3:753987-754006 None:intergenic 20.0%
!! ATACATATGATATTCAATTC+TGG - chr2_3:754025-754044 Msa0269740:CDS 20.0%
!! TTAAACCCTAAATAATTATG+TGG - chr2_3:754205-754224 Msa0269740:intron 20.0%
!!! GTTAAATTTTGAAGTTGAAT+TGG - chr2_3:754272-754291 Msa0269740:intron 20.0%
!!! CATTTTTAAATTTGATTTCC+AGG - chr2_3:755075-755094 Msa0269740:intron 20.0%
!! AAAAGAAATGAAAAGGAAAA+AGG + chr2_3:755420-755439 None:intergenic 20.0%
!! AATAAACTAATTGATCAAGT+CGG + chr2_3:755573-755592 None:intergenic 20.0%
!!! TTACTTAACTTCCTTTTATT+AGG + chr2_3:755709-755728 None:intergenic 20.0%
!! ATATATCTCATCAAACTTAA+TGG + chr2_3:755790-755809 None:intergenic 20.0%
!!! TTTGATTCTTTTGTACTTTT+TGG - chr2_3:756091-756110 Msa0269740:intron 20.0%
!!! TTGATTCTTTTGTACTTTTT+GGG - chr2_3:756092-756111 Msa0269740:intron 20.0%
!!! TTGTTTTTATAGTCTTCATT+TGG - chr2_3:756282-756301 Msa0269740:CDS 20.0%
!!! ATTTGGAATAATGTGTTAAT+CGG - chr2_3:756299-756318 Msa0269740:CDS 20.0%
!! ATGTGATTAACAATAGAAAA+GGG + chr2_3:756460-756479 None:intergenic 20.0%
!! AATGTGATTAACAATAGAAA+AGG + chr2_3:756461-756480 None:intergenic 20.0%
!! AAAGTTGTTATAGAAATGTT+TGG - chr2_3:758035-758054 Msa0269740:intron 20.0%
!!! TACATTTCTTTTAACAGATT+TGG - chr2_3:758413-758432 Msa0269740:intron 20.0%
!! TAAGGATAATTAATCCAAAT+TGG + chr2_3:758708-758727 None:intergenic 20.0%
!! TGCTAAAAAATTCAAAATTG+TGG + chr2_3:758794-758813 None:intergenic 20.0%
!!! TTACTTTCATATTGAACTTT+TGG + chr2_3:758848-758867 None:intergenic 20.0%
!! ATATGAAAGTAATGAAAATC+TGG - chr2_3:758856-758875 Msa0269740:intron 20.0%
!!! TTTTTGTGTCAAAAAAACAA+GGG + chr2_3:759105-759124 None:intergenic 20.0%
!!! ATTTTTGTGTCAAAAAAACA+AGG + chr2_3:759106-759125 None:intergenic 20.0%
!! AAACAAACTGTTGTAATATT+GGG + chr2_3:759241-759260 None:intergenic 20.0%
!! ATGCTGAACATAAATTAAAA+AGG + chr2_3:759267-759286 None:intergenic 20.0%
!! ATGCTGAACATAAATTAAAA+AGG + chr2_3:759267-759286 None:intergenic 20.0%
!! AAATAGGTAAGTAAACTATT+AGG + chr2_3:759575-759594 None:intergenic 20.0%
!!! GATAATTTTAGATTGAGAAA+AGG + chr2_3:759856-759875 None:intergenic 20.0%
!! TCTAAATACCTCTAATTTAA+TGG - chr2_3:759977-759996 Msa0269740:intron 20.0%
!! TAATACTTCCATTAAATTAG+AGG + chr2_3:759988-760007 None:intergenic 20.0%
!! TAAAACACAAACAAATTCAA+AGG + chr2_3:760374-760393 None:intergenic 20.0%
!!! TTTGAATTTGTTTGTGTTTT+AGG - chr2_3:760373-760392 Msa0269740:intron 20.0%
!!! TGTCATACATTACATATTTT+TGG - chr2_3:760693-760712 Msa0269740:five_prime_UTR 20.0%
!!! GTCATACATTACATATTTTT+GGG - chr2_3:760694-760713 Msa0269740:five_prime_UTR 20.0%
!!! TCATACATTACATATTTTTG+GGG - chr2_3:760695-760714 Msa0269740:five_prime_UTR 20.0%
! CTCTCTCTATATCTATATAT+TGG + chr2_3:753734-753753 None:intergenic 25.0%
!! TTGGTTCTTGATTGAATTTA+TGG + chr2_3:753832-753851 None:intergenic 25.0%
! GAATTGAGATTAAAGAAAGA+AGG + chr2_3:753870-753889 None:intergenic 25.0%
!! TTAAGTTAGCTGAGATTTTT+AGG - chr2_3:754171-754190 Msa0269740:intron 25.0%
! TTATGTGGTTATTAATTCTC+AGG - chr2_3:754220-754239 Msa0269740:intron 25.0%
! TATGTGGTTATTAATTCTCA+GGG - chr2_3:754221-754240 Msa0269740:intron 25.0%
! GGGATGATAACAAAAAAAAT+TGG - chr2_3:754428-754447 Msa0269740:intron 25.0%
!! AAATTCGTGTATTTTTCATC+CGG + chr2_3:754455-754474 None:intergenic 25.0%
! AACAATAATGAATTCGACAT+TGG + chr2_3:754674-754693 None:intergenic 25.0%
! AAATTCACAATAAACAAGGT+GGG + chr2_3:754720-754739 None:intergenic 25.0%
! CTTCAAATTCACAATAAACA+AGG + chr2_3:754724-754743 None:intergenic 25.0%
!!! TTATTTTTAAATTTGGGCAG+TGG - chr2_3:754788-754807 Msa0269740:intron 25.0%
! GGTATAAATTATACACTGAA+CGG + chr2_3:754983-755002 None:intergenic 25.0%
!!! CAAAAGGCTTTGTTTTTATT+CGG + chr2_3:755004-755023 None:intergenic 25.0%
!! ATTGAATTTTTGTGTGCTTT+TGG - chr2_3:755271-755290 Msa0269740:intron 25.0%
! AATCATTAATCAACAACAAC+AGG + chr2_3:755604-755623 None:intergenic 25.0%
!! TTAACTTCCTTTTATTAGGA+CGG + chr2_3:755705-755724 None:intergenic 25.0%
! TTAAGTAAGAAATCTGTACT+GGG - chr2_3:755721-755740 Msa0269740:intron 25.0%
! ATAAACTCAACTCCATAAAT+TGG + chr2_3:755825-755844 None:intergenic 25.0%
! TGGTATAAAATTGAATGCAA+CGG + chr2_3:755983-756002 None:intergenic 25.0%
!!! TTGTAAAGTGAGTTTGATTT+TGG - chr2_3:756019-756038 Msa0269740:CDS 25.0%
! TTCTCATATTCTGTAACTAT+GGG + chr2_3:756207-756226 None:intergenic 25.0%
! TGTGATTAACAATAGAAAAG+GGG + chr2_3:756459-756478 None:intergenic 25.0%
! TTTCTCTTTGATGAACTTAA+TGG - chr2_3:756508-756527 Msa0269740:intron 25.0%
! TTCTCTTTGATGAACTTAAT+GGG - chr2_3:756509-756528 Msa0269740:intron 25.0%
!! TTGTTTAATTGTGATTTGGA+TGG - chr2_3:756704-756723 Msa0269740:CDS 25.0%
!!! TTCTTTTTTGTCACCATATT+TGG - chr2_3:756932-756951 Msa0269740:CDS 25.0%
!! TTCTTTTAACAGATTTGGAT+CGG - chr2_3:758418-758437 Msa0269740:intron 25.0%
! ATAAAGTAAATTAACTGACC+TGG + chr2_3:758490-758509 None:intergenic 25.0%
! ATACATGTTAACTTAACAGT+AGG - chr2_3:758967-758986 Msa0269740:intron 25.0%
! TACATGTTAACTTAACAGTA+GGG - chr2_3:758968-758987 Msa0269740:intron 25.0%
! ACTGTATTGTTTAACATTGT+AGG - chr2_3:759177-759196 Msa0269740:intron 25.0%
! GAAACAAACTGTTGTAATAT+TGG + chr2_3:759242-759261 None:intergenic 25.0%
! AATATGATTATGAGGATTGA+GGG + chr2_3:759293-759312 None:intergenic 25.0%
! AAATATGATTATGAGGATTG+AGG + chr2_3:759294-759313 None:intergenic 25.0%
! AATATGATTATGAGGATTGA+GGG + chr2_3:759293-759312 None:intergenic 25.0%
! AAATATGATTATGAGGATTG+AGG + chr2_3:759294-759313 None:intergenic 25.0%
! TATACAAAAGGTAAATCCAT+TGG - chr2_3:759525-759544 Msa0269740:intron 25.0%
!!! CAAAAAATTACTTTTCTTGG+TGG - chr2_3:759669-759688 Msa0269740:intron 25.0%
! ATCATCAATATATACAGTCT+TGG - chr2_3:759814-759833 Msa0269740:intron 25.0%
!! GTTTTGCTTACAATCAAATT+TGG - chr2_3:760141-760160 Msa0269740:intron 25.0%
! ATAATTATTGGTCAACAAGT+AGG - chr2_3:760197-760216 Msa0269740:intron 25.0%
! TTAATGTTTAGTTGTTGTGT+TGG - chr2_3:760236-760255 Msa0269740:intron 25.0%
!!! TAATTTTATTTTCCTGTGGA+TGG - chr2_3:760741-760760 Msa0269740:five_prime_UTR 25.0%
! AAGTTACATGTGAAAATGTA+AGG - chr2_3:760880-760899 Msa0269740:five_prime_UTR 25.0%
TCTAGTTGTACTTTGAATCA+AGG + chr2_3:753561-753580 None:intergenic 30.0%
!! TTTTGATAAAGATGATGACG+TGG + chr2_3:753619-753638 None:intergenic 30.0%
!!! TTTTCAAAAGTTTTTGGGTG+AGG + chr2_3:753643-753662 None:intergenic 30.0%
AACTAGAAGAATCGAATTTG+GGG + chr2_3:753678-753697 None:intergenic 30.0%
GAACTAGAAGAATCGAATTT+GGG + chr2_3:753679-753698 None:intergenic 30.0%
AGAACTAGAAGAATCGAATT+TGG + chr2_3:753680-753699 None:intergenic 30.0%
! TCTATATATTGGTGTTTAGG+AGG + chr2_3:753723-753742 None:intergenic 30.0%
ATATAGAGAGAGAAAGAAAG+AGG - chr2_3:753742-753761 Msa0269740:three_prime_UTR 30.0%
TGTTTCGTTAACAACACAAA+CGG - chr2_3:753800-753819 Msa0269740:exon 30.0%
AAGGATCAAATCTGAGAAAT+TGG + chr2_3:753851-753870 None:intergenic 30.0%
TCTTTAATCTCAATTCTCCA+TGG - chr2_3:753874-753893 Msa0269740:CDS 30.0%
AGATATGGAAAATTCATACC+TGG + chr2_3:753972-753991 None:intergenic 30.0%
!! TTCACTGTATTGATTCAACT+AGG - chr2_3:754321-754340 Msa0269740:intron 30.0%
!! TCACTGTATTGATTCAACTA+GGG - chr2_3:754322-754341 Msa0269740:intron 30.0%
! AGTTATTTGAACTTAGCTTG+AGG - chr2_3:754352-754371 Msa0269740:intron 30.0%
! GTTATTTGAACTTAGCTTGA+GGG - chr2_3:754353-754372 Msa0269740:intron 30.0%
GATAACAAAAAAAATTGGCC+CGG - chr2_3:754433-754452 Msa0269740:intron 30.0%
! AATTCGTGTATTTTTCATCC+GGG + chr2_3:754454-754473 None:intergenic 30.0%
ATGTTGTTGAATGATTGTTG+AGG - chr2_3:754524-754543 Msa0269740:intron 30.0%
ATTAAACTCGTTGACAACTT+AGG - chr2_3:754547-754566 Msa0269740:intron 30.0%
TTAAACTCGTTGACAACTTA+GGG - chr2_3:754548-754567 Msa0269740:intron 30.0%
! ATGTATGGTGGGAATAAATA+TGG + chr2_3:754626-754645 None:intergenic 30.0%
GAATTCATTATTGTTAGCTG+TGG - chr2_3:754679-754698 Msa0269740:CDS 30.0%
CAAATTCACAATAAACAAGG+TGG + chr2_3:754721-754740 None:intergenic 30.0%
GAATCTTCTGAATCAAAATC+TGG - chr2_3:754887-754906 Msa0269740:intron 30.0%
! TGAATTTGTTTCCTTTCTCT+AGG - chr2_3:755031-755050 Msa0269740:intron 30.0%
! TAATTGACTTTCCTAGAGAA+AGG + chr2_3:755045-755064 None:intergenic 30.0%
AAAGAGTCTGTGATTCAAAT+TGG + chr2_3:755248-755267 None:intergenic 30.0%
AATCAATGATCTTAACTGTG+TGG + chr2_3:755312-755331 None:intergenic 30.0%
! AAGATCATTGATTGTGAAAC+TGG - chr2_3:755319-755338 Msa0269740:intron 30.0%
!! AATTGCTTGAAGGTATTAGT+TGG - chr2_3:755343-755362 Msa0269740:intron 30.0%
CCAGACAAAAAGAAATGAAA+AGG + chr2_3:755427-755446 None:intergenic 30.0%
! CCTTTTCATTTCTTTTTGTC+TGG - chr2_3:755424-755443 Msa0269740:intron 30.0%
! TAACTTCCTTTTATTAGGAC+GGG + chr2_3:755704-755723 None:intergenic 30.0%
GTTAAGTAAGAAATCTGTAC+TGG - chr2_3:755720-755739 Msa0269740:intron 30.0%
!! TTATACCATGTTATTTCCCA+TGG - chr2_3:755995-756014 Msa0269740:intron 30.0%
GTTCTCATATTCTGTAACTA+TGG + chr2_3:756208-756227 None:intergenic 30.0%
!! GCTATTACTGAATTTGTTGT+TGG - chr2_3:756485-756504 Msa0269740:intron 30.0%
!! ACTGACTTGGATTAATTAAC+TGG - chr2_3:756874-756893 Msa0269740:CDS 30.0%
TTTGATTAGGCAAAGTAGTA+TGG + chr2_3:757236-757255 None:intergenic 30.0%
TTGCCTAATCAAATGAGAAT+TGG - chr2_3:757243-757262 Msa0269740:CDS 30.0%
ATGCCAATTCTCATTTGATT+AGG + chr2_3:757249-757268 None:intergenic 30.0%
AAAATCAGTTACAGGTAAAC+GGG + chr2_3:757631-757650 None:intergenic 30.0%
CAAAATCAGTTACAGGTAAA+CGG + chr2_3:757632-757651 None:intergenic 30.0%
GGATTCGATTTATAATGGTT+TGG + chr2_3:757701-757720 None:intergenic 30.0%
TGACTGGATTCGATTTATAA+TGG + chr2_3:757706-757725 None:intergenic 30.0%
!!! ACTTTTAAGTTAACAGTGCA+AGG + chr2_3:757771-757790 None:intergenic 30.0%
GCACTGTTAACTTAAAAGTA+TGG - chr2_3:757772-757791 Msa0269740:intron 30.0%
AACATAGACTGATTACTTGA+TGG - chr2_3:757995-758014 Msa0269740:intron 30.0%
TACTAGCAACAATTGTTGAA+AGG + chr2_3:758335-758354 None:intergenic 30.0%
! TGAAAGCAGGTAATTTTCAA+GGG + chr2_3:758599-758618 None:intergenic 30.0%
! ATGAAAGCAGGTAATTTTCA+AGG + chr2_3:758600-758619 None:intergenic 30.0%
!!! AATCCAAATTGGTTTTAGCA+GGG + chr2_3:758697-758716 None:intergenic 30.0%
!!! TAATCCAAATTGGTTTTAGC+AGG + chr2_3:758698-758717 None:intergenic 30.0%
GAGCTCAAAAATTGATTACT+AGG + chr2_3:758883-758902 None:intergenic 30.0%
TTTCTCGTGCTCATAAAAAA+AGG + chr2_3:759042-759061 None:intergenic 30.0%
!!! TTTTTTATGAGCACGAGAAA+TGG - chr2_3:759042-759061 Msa0269740:intron 30.0%
GATAACAATTATAGTGCCAA+TGG + chr2_3:759544-759563 None:intergenic 30.0%
TGCAACTTCAAGACAAAAAT+AGG + chr2_3:759591-759610 None:intergenic 30.0%
! ATTTTTGTCTTGAAGTTGCA+TGG - chr2_3:759591-759610 Msa0269740:CDS 30.0%
! TTTTTGTCTTGAAGTTGCAT+GGG - chr2_3:759592-759611 Msa0269740:CDS 30.0%
ATCAATATATACAGTCTTGG+AGG - chr2_3:759817-759836 Msa0269740:intron 30.0%
! TTCTTTTATTCGAGACATGA+GGG + chr2_3:759925-759944 None:intergenic 30.0%
! TTTCTTTTATTCGAGACATG+AGG + chr2_3:759926-759945 None:intergenic 30.0%
! CATTCTAAAAATGTCGTTCA+TGG + chr2_3:760046-760065 None:intergenic 30.0%
AATACATGAATGAGATGACT+GGG + chr2_3:760312-760331 None:intergenic 30.0%
AAATACATGAATGAGATGAC+TGG + chr2_3:760313-760332 None:intergenic 30.0%
! GGTATATAGAGTATCAGATA+TGG - chr2_3:760394-760413 Msa0269740:intron 30.0%
AATAATTAACCAAGAGCAGA+AGG + chr2_3:760787-760806 None:intergenic 30.0%
CAAGAAAGGTTTCTATATCA+TGG - chr2_3:760819-760838 Msa0269740:five_prime_UTR 30.0%
TATATCATGTGTCCTGAAAA+TGG + chr2_3:760845-760864 None:intergenic 30.0%
CAAGTATGTTGTACATTATG+CGG - chr2_3:760936-760955 Msa0269740:five_prime_UTR 30.0%
TGTACTTTGAATCAAGGACA+TGG + chr2_3:753555-753574 None:intergenic 35.0%
! TTGGTGTTTAGGAGGAATAA+CGG + chr2_3:753715-753734 None:intergenic 35.0%
ACAAAGTTTCTCTCTCTCTA+AGG + chr2_3:753769-753788 None:intergenic 35.0%
! ATTCTCCATGGAATTTTCCA+TGG - chr2_3:753886-753905 Msa0269740:CDS 35.0%
TGATTCCATGGAAAATTCCA+TGG + chr2_3:753894-753913 None:intergenic 35.0%
TGGTTATTAATTCTCAGGGT+TGG - chr2_3:754225-754244 Msa0269740:intron 35.0%
GTCACACTATCAAGCATTTA+TGG + chr2_3:754483-754502 None:intergenic 35.0%
ATGCTAAGCATATGTATGGT+GGG + chr2_3:754637-754656 None:intergenic 35.0%
AAGCATGCTAAGCATATGTA+TGG + chr2_3:754641-754660 None:intergenic 35.0%
! TTTCGTACATGCTTGTTTCT+AGG + chr2_3:754854-754873 None:intergenic 35.0%
ACAAATTCACAGTCGACAAA+AGG + chr2_3:755020-755039 None:intergenic 35.0%
TGAAACTGGAAATTGCTTGA+AGG - chr2_3:755333-755352 Msa0269740:intron 35.0%
CAAATCTTAGATCCGATTCA+AGG + chr2_3:755547-755566 None:intergenic 35.0%
TACATACCCGTCCTAATAAA+AGG - chr2_3:755695-755714 Msa0269740:intron 35.0%
! ACTAACCAGCTACTCAATTT+TGG - chr2_3:755868-755887 Msa0269740:intron 35.0%
AACAACCAAAATTGAGTAGC+TGG + chr2_3:755876-755895 None:intergenic 35.0%
AAACTCACTTTACAAGCCAT+GGG + chr2_3:756014-756033 None:intergenic 35.0%
CATGAGTACTTCTATGAAAG+AGG - chr2_3:756121-756140 Msa0269740:intron 35.0%
ATAATGTGTTAATCGGCTAC+AGG - chr2_3:756306-756325 Msa0269740:CDS 35.0%
AACAATAGAAAAGGGGAGAT+GGG + chr2_3:756452-756471 None:intergenic 35.0%
TAACAATAGAAAAGGGGAGA+TGG + chr2_3:756453-756472 None:intergenic 35.0%
AACAGCAATTATTTCCCCAT+TGG + chr2_3:756577-756596 None:intergenic 35.0%
! GAAATAATTGCTGTTGCATC+AGG - chr2_3:756582-756601 Msa0269740:intron 35.0%
TCACCAAAGGTTATAACACA+TGG + chr2_3:756651-756670 None:intergenic 35.0%
CTTGTCTTCAACACAAATAC+TGG + chr2_3:756785-756804 None:intergenic 35.0%
CAGTATTTGTGTTGAAGACA+AGG - chr2_3:756783-756802 Msa0269740:CDS 35.0%
!! ACCATATCTTTTAACTGCTC+AGG - chr2_3:756844-756863 Msa0269740:CDS 35.0%
ACCTGAGCAGTTAAAAGATA+TGG + chr2_3:756848-756867 None:intergenic 35.0%
! TCATTTAGAATATCCTCCAC+CGG - chr2_3:757020-757039 Msa0269740:CDS 35.0%
ACATTTGTGACAAAAACAGC+CGG + chr2_3:757042-757061 None:intergenic 35.0%
! ATACCTGCAGTTTTACAATC+AGG - chr2_3:757582-757601 Msa0269740:intron 35.0%
AAACCTGATTGTAAAACTGC+AGG + chr2_3:757588-757607 None:intergenic 35.0%
!! CGTTTACCTGTAACTGATTT+TGG - chr2_3:757630-757649 Msa0269740:CDS 35.0%
AGATTGCCAAAATCAGTTAC+AGG + chr2_3:757639-757658 None:intergenic 35.0%
TCATGCGGCAAATTAATAGA+AGG + chr2_3:757666-757685 None:intergenic 35.0%
!! TCTATTAATTTGCCGCATGA+TGG - chr2_3:757666-757685 Msa0269740:CDS 35.0%
!! CTATTAATTTGCCGCATGAT+GGG - chr2_3:757667-757686 Msa0269740:CDS 35.0%
GATAGGTTCATAACTTCAGA+AGG + chr2_3:757875-757894 None:intergenic 35.0%
ACACTATATCAATCACATGC+TGG + chr2_3:757907-757926 None:intergenic 35.0%
! AAATGTTTGGAGTGACTTTG+TGG - chr2_3:758048-758067 Msa0269740:intron 35.0%
AACTGTGTTTGCAGTGAAAT+GGG - chr2_3:758106-758125 Msa0269740:CDS 35.0%
TCTACCACATGGTGAAAAAT+GGG + chr2_3:758134-758153 None:intergenic 35.0%
ATCTACCACATGGTGAAAAA+TGG + chr2_3:758135-758154 None:intergenic 35.0%
TGTACAAGAGTTTGTAATCC+TGG + chr2_3:758205-758224 None:intergenic 35.0%
ATTACAAACTCTTGTACACC+AGG - chr2_3:758207-758226 Msa0269740:intron 35.0%
ATTACTTGATGTGCTGAGAT+TGG + chr2_3:758265-758284 None:intergenic 35.0%
ATCAAGTAATGTATGAGCTC+CGG - chr2_3:758275-758294 Msa0269740:intron 35.0%
TGAGGACTAAAAATGAAAGC+AGG + chr2_3:758612-758631 None:intergenic 35.0%
! TTTTAGCAGGGACTAAAACT+GGG + chr2_3:758685-758704 None:intergenic 35.0%
! TGCGTGCAGGAAAATTTTAT+AGG - chr2_3:758999-759018 Msa0269740:intron 35.0%
! GCGTGCAGGAAAATTTTATA+GGG - chr2_3:759000-759019 Msa0269740:intron 35.0%
!!! ATGGAAGTTGGTGATTTTGT+AGG - chr2_3:759061-759080 Msa0269740:intron 35.0%
!!! TGGAAGTTGGTGATTTTGTA+GGG - chr2_3:759062-759081 Msa0269740:intron 35.0%
!! CTGAAAAGCATTGTCATTGA+TGG - chr2_3:759782-759801 Msa0269740:intron 35.0%
TACAGTCTTGGAGGTAAAAA+TGG - chr2_3:759826-759845 Msa0269740:intron 35.0%
CAACAAGTAGGCACTATTTA+TGG - chr2_3:760209-760228 Msa0269740:intron 35.0%
TATCAGATATGGAACTTGTC+AGG - chr2_3:760405-760424 Msa0269740:intron 35.0%
ATCAGATATGGAACTTGTCA+GGG - chr2_3:760406-760425 Msa0269740:intron 35.0%
! TTGCATTCAAAAGCATACCT+TGG + chr2_3:760507-760526 None:intergenic 35.0%
TGCCATTCACATTACAAGTA+CGG + chr2_3:760617-760636 None:intergenic 35.0%
AAAAATTCACTTCCATCCAC+AGG + chr2_3:760756-760775 None:intergenic 35.0%
TTGAACAGTCAAAGCAAGAA+AGG - chr2_3:760805-760824 Msa0269740:five_prime_UTR 35.0%
!! TCTATATCATGGCCATTTTC+AGG - chr2_3:760830-760849 Msa0269740:five_prime_UTR 35.0%
ATCAAGGACATGGATGATGT+TGG + chr2_3:753545-753564 None:intergenic 40.0%
TAGAAGAATCGAATTTGGGG+TGG + chr2_3:753675-753694 None:intergenic 40.0%
! GGAATTTTCCATGGAATCAG+CGG - chr2_3:753895-753914 Msa0269740:intron 40.0%
! ATACCTGGTGTTGGAATTCT+GGG + chr2_3:753957-753976 None:intergenic 40.0%
GGAAAATTCATACCTGGTGT+TGG + chr2_3:753966-753985 None:intergenic 40.0%
! TTGAACTTAGCTTGAGGGTT+AGG - chr2_3:754358-754377 Msa0269740:intron 40.0%
CATGCTAAGCATATGTATGG+TGG + chr2_3:754638-754657 None:intergenic 40.0%
TTCACAATAAACAAGGTGGG+TGG + chr2_3:754717-754736 None:intergenic 40.0%
AGTTGTGTAAGTACCATGAG+AGG + chr2_3:754955-754974 None:intergenic 40.0%
! CTCTAGGAAAGTCAATTACG+AGG - chr2_3:755047-755066 Msa0269740:intron 40.0%
! AAATTTGATTTCCAGGGTCG+AGG - chr2_3:755082-755101 Msa0269740:intron 40.0%
AGGCAATAAAGGGCAATACT+TGG + chr2_3:755132-755151 None:intergenic 40.0%
AATTGCAACTTACTGTGTGG+AGG + chr2_3:755207-755226 None:intergenic 40.0%
TCCACACAGTAAGTTGCAAT+TGG - chr2_3:755206-755225 Msa0269740:intron 40.0%
TCCAATTGCAACTTACTGTG+TGG + chr2_3:755210-755229 None:intergenic 40.0%
! TTCAAGGAGACATGGGTTAT+GGG + chr2_3:755531-755550 None:intergenic 40.0%
! ATTCAAGGAGACATGGGTTA+TGG + chr2_3:755532-755551 None:intergenic 40.0%
TAACCCATGTCTCCTTGAAT+CGG - chr2_3:755532-755551 Msa0269740:intron 40.0%
ACAAGCCATGGGAAATAACA+TGG + chr2_3:756003-756022 None:intergenic 40.0%
CAAACTCACTTTACAAGCCA+TGG + chr2_3:756015-756034 None:intergenic 40.0%
ACTTGGCGTTAGAGATTACA+GGG + chr2_3:756175-756194 None:intergenic 40.0%
CAGAATATGAGAACCGTTCT+AGG - chr2_3:756214-756233 Msa0269740:CDS 40.0%
ATCAGGACATATGCCTAGAA+CGG + chr2_3:756230-756249 None:intergenic 40.0%
TTCTAGGCATATGTCCTGAT+GGG - chr2_3:756230-756249 Msa0269740:CDS 40.0%
ACAAACACTAAGACTGTGCT+AGG + chr2_3:756266-756285 None:intergenic 40.0%
! AACGACAGATACTTGCTAGT+GGG - chr2_3:756347-756366 Msa0269740:CDS 40.0%
TGGACCAAGAAGTTCGTTTA+TGG - chr2_3:756374-756393 Msa0269740:intron 40.0%
GGACCAAGAAGTTCGTTTAT+GGG - chr2_3:756375-756394 Msa0269740:intron 40.0%
CATCCCATAAACGAACTTCT+TGG + chr2_3:756381-756400 None:intergenic 40.0%
CAATTATTTCCCCATTGGCA+TGG + chr2_3:756572-756591 None:intergenic 40.0%
TATAACACATGGCAGGTTCT+CGG + chr2_3:756640-756659 None:intergenic 40.0%
CAAAGGTTATAACACATGGC+AGG + chr2_3:756647-756666 None:intergenic 40.0%
CTGCCATGTGTTATAACCTT+TGG - chr2_3:756645-756664 Msa0269740:CDS 40.0%
AAGGTAGAACATGTCACCAA+AGG + chr2_3:756664-756683 None:intergenic 40.0%
TGTGGCACTACAAAAATGCA+AGG - chr2_3:756747-756766 Msa0269740:CDS 40.0%
GTGGCACTACAAAAATGCAA+GGG - chr2_3:756748-756767 Msa0269740:CDS 40.0%
TTCAGATTGCTCAATGACAG+AGG - chr2_3:756984-757003 Msa0269740:CDS 40.0%
TTGTCACAAATGTTCATCCC+AGG - chr2_3:757049-757068 Msa0269740:CDS 40.0%
AATTCAACTCTTGACACTGG+TGG + chr2_3:757099-757118 None:intergenic 40.0%
TGCAATTCAACTCTTGACAC+TGG + chr2_3:757102-757121 None:intergenic 40.0%
! AGCATGCAGGTTGAACAATA+CGG - chr2_3:757150-757169 Msa0269740:CDS 40.0%
CAAACCGGAGCAGAATATAA+TGG - chr2_3:757210-757229 Msa0269740:CDS 40.0%
ATGGCCATTATATTCTGCTC+CGG + chr2_3:757217-757236 None:intergenic 40.0%
TGGCATCAATAACCTCACAA+TGG - chr2_3:757263-757282 Msa0269740:CDS 40.0%
GGCATCAATAACCTCACAAT+GGG - chr2_3:757264-757283 Msa0269740:CDS 40.0%
ATCAATAACCTCACAATGGG+TGG - chr2_3:757267-757286 Msa0269740:CDS 40.0%
!!! GTTTTCATGTTGGCTTGCTT+CGG + chr2_3:757319-757338 None:intergenic 40.0%
! CATGATCAGCGTTTTCATGT+TGG + chr2_3:757329-757348 None:intergenic 40.0%
CATCCATTAGAATCTGGTGA+CGG + chr2_3:757402-757421 None:intergenic 40.0%
! GTCACCAGATTCTAATGGAT+GGG - chr2_3:757401-757420 Msa0269740:CDS 40.0%
ACTAACCATCCTTGCAGAAA+AGG + chr2_3:757432-757451 None:intergenic 40.0%
TTTCTGCAAGGATGGTTAGT+CGG - chr2_3:757432-757451 Msa0269740:CDS 40.0%
!! ATCTGTTGAGGAAGCATTGA+GGG + chr2_3:757477-757496 None:intergenic 40.0%
!! AATCTGTTGAGGAAGCATTG+AGG + chr2_3:757478-757497 None:intergenic 40.0%
TCAATGCTTCCTCAACAGAT+TGG - chr2_3:757477-757496 Msa0269740:CDS 40.0%
GTGAAAGAACCAATCTGTTG+AGG + chr2_3:757489-757508 None:intergenic 40.0%
!! TTGGTGGTGAACAGATTAGA+TGG + chr2_3:757516-757535 None:intergenic 40.0%
TTAGACGGCATCTTTGTAGT+GGG + chr2_3:757824-757843 None:intergenic 40.0%
CGACATGTGGTATAGTTAGA+CGG + chr2_3:757839-757858 None:intergenic 40.0%
CAACTGTGTTTGCAGTGAAA+TGG - chr2_3:758105-758124 Msa0269740:CDS 40.0%
!! AGCAGGTAATTTTCAAGGGA+CGG + chr2_3:758595-758614 None:intergenic 40.0%
!! GTTTTAGCAGGGACTAAAAC+TGG + chr2_3:758686-758705 None:intergenic 40.0%
AGTCCCTGCTAAAACCAATT+TGG - chr2_3:758691-758710 Msa0269740:intron 40.0%
CTCGTGCTCATAAAAAAAGG+TGG + chr2_3:759039-759058 None:intergenic 40.0%
CGCACACACACATATACAAA+AGG - chr2_3:759513-759532 Msa0269740:intron 40.0%
AGCAGAATATGCTCAGATGT+AGG + chr2_3:759734-759753 None:intergenic 40.0%
! TGTTTAGTTGTTGTGTTGGC+TGG - chr2_3:760240-760259 Msa0269740:intron 40.0%
! CATGCTTTCATCCTTTTCCT+GGG - chr2_3:760462-760481 Msa0269740:intron 40.0%
! ATGCTTTCATCCTTTTCCTG+GGG - chr2_3:760463-760482 Msa0269740:intron 40.0%
GTTGTAGGAAGGAAAGCTTA+GGG - chr2_3:760578-760597 Msa0269740:CDS 40.0%
CATTACAAGTACGGTCAAAC+TGG + chr2_3:760608-760627 None:intergenic 40.0%
GACCGTACTTGTAATGTGAA+TGG - chr2_3:760612-760631 Msa0269740:five_prime_UTR 40.0%
ACTTGTAATGTGAATGGCAC+TGG - chr2_3:760618-760637 Msa0269740:five_prime_UTR 40.0%
TAACCAAGAGCAGAAGGAAA+GGG + chr2_3:760781-760800 None:intergenic 40.0%
TTAACCAAGAGCAGAAGGAA+AGG + chr2_3:760782-760801 None:intergenic 40.0%
!! ATGAAGTTCCGCTGATTCCA+TGG + chr2_3:753906-753925 None:intergenic 45.0%
! TTGGAATTCTGGGAGGATGA+GGG + chr2_3:753947-753966 None:intergenic 45.0%
! CATACCTGGTGTTGGAATTC+TGG + chr2_3:753958-753977 None:intergenic 45.0%
!! CTTGATAGTGTGACAGTCAC+AGG - chr2_3:754489-754508 Msa0269740:intron 45.0%
!! AGCATGTACGAAAGTGTCAC+TGG - chr2_3:754861-754880 Msa0269740:intron 45.0%
!! GCATGTACGAAAGTGTCACT+GGG - chr2_3:754862-754881 Msa0269740:intron 45.0%
!! CATGTACGAAAGTGTCACTG+GGG - chr2_3:754863-754882 Msa0269740:intron 45.0%
!! CTGTTCTCGTTCTAGAACAG+TGG - chr2_3:754910-754929 Msa0269740:intron 45.0%
ACAGTGGTAGATGCAAAGTG+TGG - chr2_3:754926-754945 Msa0269740:intron 45.0%
CTGCAGCATTTAGTCCAGAT+GGG - chr2_3:755171-755190 Msa0269740:intron 45.0%
! GAGGCAAGAATTTTCCCATC+TGG + chr2_3:755188-755207 None:intergenic 45.0%
AGGTATTAGTTGGCCACAGA+AGG - chr2_3:755353-755372 Msa0269740:intron 45.0%
!! AACACCTCCTGAAAGTGTTG+TGG - chr2_3:755504-755523 Msa0269740:intron 45.0%
!! ACACCTCCTGAAAGTGTTGT+GGG - chr2_3:755505-755524 Msa0269740:intron 45.0%
GATCCGATTCAAGGAGACAT+GGG + chr2_3:755538-755557 None:intergenic 45.0%
AGATCCGATTCAAGGAGACA+TGG + chr2_3:755539-755558 None:intergenic 45.0%
! CGCTAGTGTAGCTCTACTAT+AGG + chr2_3:755674-755693 None:intergenic 45.0%
!! CCATAAATTGGCTCGTCTTC+TGG + chr2_3:755813-755832 None:intergenic 45.0%
CCAGAAGACGAGCCAATTTA+TGG - chr2_3:755810-755829 Msa0269740:intron 45.0%
CACTTGGCGTTAGAGATTAC+AGG + chr2_3:756176-756195 None:intergenic 45.0%
CTGTAATCTCTAACGCCAAG+TGG - chr2_3:756174-756193 Msa0269740:CDS 45.0%
ACTATGGGCACAAAACCACT+TGG + chr2_3:756192-756211 None:intergenic 45.0%
! GTTCTAGGCATATGTCCTGA+TGG - chr2_3:756229-756248 Msa0269740:CDS 45.0%
! TAGGATTTGAAGCACCCATC+AGG + chr2_3:756247-756266 None:intergenic 45.0%
GTGTTAATCGGCTACAGGTT+AGG - chr2_3:756311-756330 Msa0269740:CDS 45.0%
GTATCTGTCGTTGCAATGGA+TGG + chr2_3:756339-756358 None:intergenic 45.0%
GCAAGTATCTGTCGTTGCAA+TGG + chr2_3:756343-756362 None:intergenic 45.0%
! CAACGACAGATACTTGCTAG+TGG - chr2_3:756346-756365 Msa0269740:CDS 45.0%
! GATACTTGCTAGTGGGAGTT+TGG - chr2_3:756354-756373 Msa0269740:CDS 45.0%
GGAAAGCGAGAGATGCAATA+GGG + chr2_3:756551-756570 None:intergenic 45.0%
TGGAAAGCGAGAGATGCAAT+AGG + chr2_3:756552-756571 None:intergenic 45.0%
TACTGTGTCAGTTGTACGTG+TGG - chr2_3:756729-756748 Msa0269740:CDS 45.0%
AAAAGATATGGTGCCCCATG+CGG + chr2_3:756836-756855 None:intergenic 45.0%
CCTGCACATCGATCCAAATA+TGG + chr2_3:756948-756967 None:intergenic 45.0%
CCATATTTGGATCGATGTGC+AGG - chr2_3:756945-756964 Msa0269740:CDS 45.0%
ATGACAGAGGCAACATCTCA+TGG - chr2_3:756997-757016 Msa0269740:CDS 45.0%
TTTGTGACAAAAACAGCCGG+TGG + chr2_3:757039-757058 None:intergenic 45.0%
CAGCATGCTAGTAACGATGT+TGG - chr2_3:757120-757139 Msa0269740:CDS 45.0%
!! TGTTGGTTTGAGTAGCATGC+AGG - chr2_3:757137-757156 Msa0269740:CDS 45.0%
! TTGAGAGCTAGTGGGTATCT+CGG + chr2_3:757193-757212 None:intergenic 45.0%
! ATACCCACTAGCTCTCAAAC+CGG - chr2_3:757195-757214 Msa0269740:CDS 45.0%
ATAACCTCACAATGGGTGGT+AGG - chr2_3:757271-757290 Msa0269740:CDS 45.0%
TAACCTCACAATGGGTGGTA+GGG - chr2_3:757272-757291 Msa0269740:CDS 45.0%
GTTCCGTCACCAGATTCTAA+TGG - chr2_3:757396-757415 Msa0269740:CDS 45.0%
CGTCACCAGATTCTAATGGA+TGG - chr2_3:757400-757419 Msa0269740:CDS 45.0%
AGCTCCCATCCATTAGAATC+TGG + chr2_3:757408-757427 None:intergenic 45.0%
TTAGTCGGTCAAAGCCAAGT+TGG - chr2_3:757447-757466 Msa0269740:CDS 45.0%
TCAGTTACAGGTAAACGGGA+TGG + chr2_3:757627-757646 None:intergenic 45.0%
TGGCTATCAAACCCATCATG+CGG + chr2_3:757681-757700 None:intergenic 45.0%
!! CTGATTTGGCAAGTTCTGAC+TGG + chr2_3:757722-757741 None:intergenic 45.0%
GTCAGAACTTGCCAAATCAG+TGG - chr2_3:757722-757741 Msa0269740:CDS 45.0%
TAATTCTGTAGCAGCTGCAG+TGG + chr2_3:757748-757767 None:intergenic 45.0%
TAGACGGCATCTTTGTAGTG+GGG + chr2_3:757823-757842 None:intergenic 45.0%
GTTAGACGGCATCTTTGTAG+TGG + chr2_3:757825-757844 None:intergenic 45.0%
CATGCTGGAGCAGATATGAT+AGG + chr2_3:757892-757911 None:intergenic 45.0%
GCGGCTAAAAATCTACCACA+TGG + chr2_3:758145-758164 None:intergenic 45.0%
TGCATGTATGCACCCTCATA+TGG - chr2_3:758171-758190 Msa0269740:intron 45.0%
CTGGATCAGCTTCCATATGA+GGG + chr2_3:758186-758205 None:intergenic 45.0%
CTTCCTCCAGGGAATATATC+CGG + chr2_3:758297-758316 None:intergenic 45.0%
! TGGACTAGAGTACATCTGAG+AGG + chr2_3:758368-758387 None:intergenic 45.0%
! AGGCAATGAGCAGCTCTAAT+TGG + chr2_3:758458-758477 None:intergenic 45.0%
TCATTGCCTGACTTCAATCC+AGG - chr2_3:758469-758488 Msa0269740:intron 45.0%
AACTGACCTGGATTGAAGTC+AGG + chr2_3:758478-758497 None:intergenic 45.0%
! TAGGGAATAAAAGTGCGTGC+AGG - chr2_3:758986-759005 Msa0269740:intron 45.0%
TGAGCACGAGAAATGGAAGT+TGG - chr2_3:759049-759068 Msa0269740:intron 45.0%
TTGTATATGTGTGTGTGCGC+AGG + chr2_3:759512-759531 None:intergenic 45.0%
! GCATGCTTTCATCCTTTTCC+TGG - chr2_3:760461-760480 Msa0269740:intron 45.0%
! TGCTTTCATCCTTTTCCTGG+GGG - chr2_3:760464-760483 Msa0269740:intron 45.0%
! GATTGATAACCCTTTGCTCG+TGG - chr2_3:760553-760572 Msa0269740:CDS 45.0%
GGTTGTAGGAAGGAAAGCTT+AGG - chr2_3:760577-760596 Msa0269740:CDS 45.0%
! AATGTGAATGGCACTGGATC+TGG - chr2_3:760624-760643 Msa0269740:five_prime_UTR 45.0%
TTCCCTGAGGAGAACATGAT+TGG - chr2_3:760651-760670 Msa0269740:five_prime_UTR 45.0%
CTCCAATCATGTTCTCCTCA+GGG + chr2_3:760656-760675 None:intergenic 45.0%
ACTCCAATCATGTTCTCCTC+AGG + chr2_3:760657-760676 None:intergenic 45.0%
TTGGAGTCGATCAATGAGCA+AGG - chr2_3:760670-760689 Msa0269740:five_prime_UTR 45.0%
!! ATAAAAAAATAAAAAAACAA+AGG + chr2_3:756683-756702 None:intergenic 5.0%
!! AAAATAATTCAAAAATTTAA+AGG + chr2_3:758733-758752 None:intergenic 5.0%
! AAGATGATGACGTGGCGTCT+AGG + chr2_3:753611-753630 None:intergenic 50.0%
! GAGGGTTGATCATGACACAG+AGG + chr2_3:753929-753948 None:intergenic 50.0%
! GTTGGAATTCTGGGAGGATG+AGG + chr2_3:753948-753967 None:intergenic 50.0%
CAAAGTGTGGTCTCCTCTCA+TGG - chr2_3:754939-754958 Msa0269740:intron 50.0%
TGCAGCAATAGTAGACCGTG+GGG + chr2_3:755156-755175 None:intergenic 50.0%
CTGCAGCAATAGTAGACCGT+GGG + chr2_3:755157-755176 None:intergenic 50.0%
GCTGCAGCATTTAGTCCAGA+TGG - chr2_3:755170-755189 Msa0269740:intron 50.0%
! TGTGCTTTTGGCATGTGCAG+TGG - chr2_3:755283-755302 Msa0269740:intron 50.0%
AAGCCAAAGCTTACCACCCA+AGG + chr2_3:755382-755401 None:intergenic 50.0%
TATGGGCCCACAACACTTTC+AGG + chr2_3:755514-755533 None:intergenic 50.0%
TCTCTCGCTTTCCATGCCAA+TGG - chr2_3:756558-756577 Msa0269740:intron 50.0%
CTCTCGCTTTCCATGCCAAT+GGG - chr2_3:756559-756578 Msa0269740:intron 50.0%
TCTCGCTTTCCATGCCAATG+GGG - chr2_3:756560-756579 Msa0269740:intron 50.0%
TGCTGTTGCATCAGGTCACA+AGG - chr2_3:756590-756609 Msa0269740:intron 50.0%
! CTGTGCATTTTCACCCGCAT+GGG - chr2_3:756819-756838 Msa0269740:CDS 50.0%
! TGTGCATTTTCACCCGCATG+GGG - chr2_3:756820-756839 Msa0269740:CDS 50.0%
AAAGATATGGTGCCCCATGC+GGG + chr2_3:756835-756854 None:intergenic 50.0%
CTCAGGTGAGTGAACTGACT+TGG - chr2_3:756861-756880 Msa0269740:CDS 50.0%
GACATGTTGATCTGCGTCCT+GGG + chr2_3:757069-757088 None:intergenic 50.0%
TGACATGTTGATCTGCGTCC+TGG + chr2_3:757070-757089 None:intergenic 50.0%
!! TCTGGTGACGGAACAATCTG+AGG + chr2_3:757390-757409 None:intergenic 50.0%
! AGCTGCCTTTTCTGCAAGGA+TGG - chr2_3:757424-757443 Msa0269740:CDS 50.0%
GCATTGAGGGAACACCAACT+TGG + chr2_3:757464-757483 None:intergenic 50.0%
CACAGCTAGCTCAACATTGG+TGG + chr2_3:757532-757551 None:intergenic 50.0%
TGGCACAGCTAGCTCAACAT+TGG + chr2_3:757535-757554 None:intergenic 50.0%
ATGCCATTGGGCATTCCTGA+AGG + chr2_3:757558-757577 None:intergenic 50.0%
GCAGGTATGCTGATGCCATT+GGG + chr2_3:757570-757589 None:intergenic 50.0%
TGCAGGTATGCTGATGCCAT+TGG + chr2_3:757571-757590 None:intergenic 50.0%
!! ACTTCAGAAGGTACCTGCAG+AGG + chr2_3:757863-757882 None:intergenic 50.0%
!! GGTGCCCATTTTTCACCATG+TGG - chr2_3:758127-758146 Msa0269740:CDS 50.0%
GTGCATACATGCAACACAGG+CGG + chr2_3:758164-758183 None:intergenic 50.0%
AGGGTGCATACATGCAACAC+AGG + chr2_3:758167-758186 None:intergenic 50.0%
CCTGGATCAGCTTCCATATG+AGG + chr2_3:758187-758206 None:intergenic 50.0%
CCTCATATGGAAGCTGATCC+AGG - chr2_3:758184-758203 Msa0269740:intron 50.0%
!! GTTGGTGATGTTGGAAGTCC+AGG + chr2_3:758235-758254 None:intergenic 50.0%
!! GGATGTCGAGTTGGTGATGT+TGG + chr2_3:758244-758263 None:intergenic 50.0%
GCTGAGATTGGATGTCGAGT+TGG + chr2_3:758253-758272 None:intergenic 50.0%
TGAGCTCCGGATATATTCCC+TGG - chr2_3:758288-758307 Msa0269740:intron 50.0%
GGGCGCAGGAAAATACTGTA+AGG + chr2_3:758665-758684 None:intergenic 50.0%
ATATGTGTGTGTGCGCAGGA+GGG + chr2_3:759508-759527 None:intergenic 50.0%
TATATGTGTGTGTGCGCAGG+AGG + chr2_3:759509-759528 None:intergenic 50.0%
GAGCATATTCTGCTCGCCTA+TGG - chr2_3:759740-759759 Msa0269740:intron 50.0%
AGAGCTATGACGTCGACCAT+AGG + chr2_3:759759-759778 None:intergenic 50.0%
! GCTTTCTAGTGCAGAGGATG+AGG - chr2_3:760430-760449 Msa0269740:intron 50.0%
TGCAGAGGATGAGGTCAATG+TGG - chr2_3:760439-760458 Msa0269740:intron 50.0%
! TTTCATCCTTTTCCTGGGGG+AGG - chr2_3:760467-760486 Msa0269740:intron 50.0%
! TTCATCCTTTTCCTGGGGGA+GGG - chr2_3:760468-760487 Msa0269740:intron 50.0%
AGGGCTTGTCTATGGAACCA+AGG - chr2_3:760487-760506 Msa0269740:intron 50.0%
TGATAACCCTTTGCTCGTGG+TGG - chr2_3:760556-760575 Msa0269740:CDS 50.0%
CTACAACCACCACGAGCAAA+GGG + chr2_3:760565-760584 None:intergenic 50.0%
TGGATCTGGTTACTTCCCTG+AGG - chr2_3:760638-760657 Msa0269740:five_prime_UTR 50.0%
TCACCCTTTCCTTCTGCTCT+TGG - chr2_3:760775-760794 Msa0269740:five_prime_UTR 50.0%
! CCTGGTGTTGGAATTCTGGG+AGG + chr2_3:753954-753973 None:intergenic 55.0%
CCTCCCAGAATTCCAACACC+AGG - chr2_3:753951-753970 Msa0269740:intron 55.0%
ACCGTGGGGCAGGCAATAAA+GGG + chr2_3:755142-755161 None:intergenic 55.0%
GCTGCAGCAATAGTAGACCG+TGG + chr2_3:755158-755177 None:intergenic 55.0%
ACGCCTTGGGTGGTAAGCTT+TGG - chr2_3:755376-755395 Msa0269740:intron 55.0%
GGGATGCTAGCTCATCAGAG+TGG - chr2_3:756395-756414 Msa0269740:intron 55.0%
! TGAAGACAAGGCGCTCGCTA+CGG - chr2_3:756795-756814 Msa0269740:CDS 55.0%
! GCTGTGCATTTTCACCCGCA+TGG - chr2_3:756818-756837 Msa0269740:CDS 55.0%
GTGACAAAAACAGCCGGTGG+AGG + chr2_3:757036-757055 None:intergenic 55.0%
! GCTCCGGTTTGAGAGCTAGT+GGG + chr2_3:757201-757220 None:intergenic 55.0%
! TGCTCCGGTTTGAGAGCTAG+TGG + chr2_3:757202-757221 None:intergenic 55.0%
!! TCATGTTGGCTTGCTTCGGC+TGG + chr2_3:757315-757334 None:intergenic 55.0%
CGCGTTGAACTCTCTGAGCT+TGG - chr2_3:757357-757376 Msa0269740:CDS 55.0%
! TGGGAGCTGCCTTTTCTGCA+AGG - chr2_3:757420-757439 Msa0269740:CDS 55.0%
CCATTGGGCATTCCTGAAGG+TGG + chr2_3:757555-757574 None:intergenic 55.0%
CCACCTTCAGGAATGCCCAA+TGG - chr2_3:757552-757571 Msa0269740:intron 55.0%
! AGCTGCAGTGGCCACTGATT+TGG + chr2_3:757736-757755 None:intergenic 55.0%
! CATCTTTGTAGTGGGGCGCA+GGG + chr2_3:757816-757835 None:intergenic 55.0%
TACCACATGTCGTCCTCTGC+AGG - chr2_3:757847-757866 Msa0269740:intron 55.0%
TACCTGCAGAGGACGACATG+TGG + chr2_3:757852-757871 None:intergenic 55.0%
ACTCTTGTACACCAGGAGCC+TGG - chr2_3:758214-758233 Msa0269740:intron 55.0%
ATGTTGGAAGTCCAGGCTCC+TGG + chr2_3:758228-758247 None:intergenic 55.0%
GCTCCGGATATATTCCCTGG+AGG - chr2_3:758291-758310 Msa0269740:intron 55.0%
GTCGTACGTTGCTTCCTCCA+GGG + chr2_3:758308-758327 None:intergenic 55.0%
AGTCGTACGTTGCTTCCTCC+AGG + chr2_3:758309-758328 None:intergenic 55.0%
GGAGGGAGGGACAGAGATAT+GGG + chr2_3:759491-759510 None:intergenic 55.0%
AGGAGGGAGGGACAGAGATA+TGG + chr2_3:759492-759511 None:intergenic 55.0%
! CAGGGTGCTTTCTAGTGCAG+AGG - chr2_3:760424-760443 Msa0269740:intron 55.0%
CCTACAACCACCACGAGCAA+AGG + chr2_3:760566-760585 None:intergenic 55.0%
CCTTTGCTCGTGGTGGTTGT+AGG - chr2_3:760563-760582 Msa0269740:CDS 55.0%
TGCTCGTGGTGGTTGTAGGA+AGG - chr2_3:760567-760586 Msa0269740:CDS 55.0%
CAATGACTCAGCCTCGACCC+TGG + chr2_3:755096-755115 None:intergenic 60.0%
GCCCTTTATTGCCTGCCCCA+CGG - chr2_3:755138-755157 Msa0269740:intron 60.0%
GACCGTGGGGCAGGCAATAA+AGG + chr2_3:755143-755162 None:intergenic 60.0%
GCAATAGTAGACCGTGGGGC+AGG + chr2_3:755152-755171 None:intergenic 60.0%
TTGGCCACAGAAGGACGCCT+TGG - chr2_3:755362-755381 Msa0269740:intron 60.0%
TGGCCACAGAAGGACGCCTT+GGG - chr2_3:755363-755382 Msa0269740:intron 60.0%
GGGCCCACAACACTTTCAGG+AGG + chr2_3:755511-755530 None:intergenic 60.0%
! GAAGACAAGGCGCTCGCTAC+GGG - chr2_3:756796-756815 Msa0269740:CDS 60.0%
CCTCCCTACCACCCATTGTG+AGG + chr2_3:757278-757297 None:intergenic 60.0%
CCTCACAATGGGTGGTAGGG+AGG - chr2_3:757275-757294 Msa0269740:CDS 60.0%
GAGCTAGCTGTGCCACCTTC+AGG - chr2_3:757540-757559 Msa0269740:intron 60.0%
! GCATCTTTGTAGTGGGGCGC+AGG + chr2_3:757817-757836 None:intergenic 60.0%
CAGGGACTAAAACTGGGCGC+AGG + chr2_3:758679-758698 None:intergenic 60.0%
ACAAGCCCTCCCCCAGGAAA+AGG + chr2_3:760476-760495 None:intergenic 60.0%
! CCACCCAAGGCGTCCTTCTG+TGG + chr2_3:755369-755388 None:intergenic 65.0%
CCACAGAAGGACGCCTTGGG+TGG - chr2_3:755366-755385 Msa0269740:intron 65.0%
GTGTGTGTGCGCAGGAGGGA+GGG + chr2_3:759504-759523 None:intergenic 65.0%
TGTGTGTGTGCGCAGGAGGG+AGG + chr2_3:759505-759524 None:intergenic 65.0%
CCATAGACAAGCCCTCCCCC+AGG + chr2_3:760482-760501 None:intergenic 65.0%
CCTGGGGGAGGGCTTGTCTA+TGG - chr2_3:760479-760498 Msa0269740:intron 65.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 753515 760978 753515 ID=Msa0269740;Name=Msa0269740
chr2_3 mRNA 753515 760978 753515 ID=Msa0269740-mRNA-1;Parent=Msa0269740;Name=Msa0269740-mRNA-1;_AED=0.04;_eAED=0.04;_QI=378|1|1|1|1|1|13|292|743
chr2_3 exon 753515 753908 753515 ID=Msa0269740-mRNA-1:exon:313;Parent=Msa0269740-mRNA-1
chr2_3 exon 753985 754098 753985 ID=Msa0269740-mRNA-1:exon:312;Parent=Msa0269740-mRNA-1
chr2_3 exon 754655 754768 754655 ID=Msa0269740-mRNA-1:exon:311;Parent=Msa0269740-mRNA-1
chr2_3 exon 756003 756063 756003 ID=Msa0269740-mRNA-1:exon:310;Parent=Msa0269740-mRNA-1
chr2_3 exon 756173 756373 756173 ID=Msa0269740-mRNA-1:exon:309;Parent=Msa0269740-mRNA-1
chr2_3 exon 756625 757526 756625 ID=Msa0269740-mRNA-1:exon:308;Parent=Msa0269740-mRNA-1
chr2_3 exon 757628 757753 757628 ID=Msa0269740-mRNA-1:exon:307;Parent=Msa0269740-mRNA-1
chr2_3 exon 757882 757949 757882 ID=Msa0269740-mRNA-1:exon:306;Parent=Msa0269740-mRNA-1
chr2_3 exon 758057 758165 758057 ID=Msa0269740-mRNA-1:exon:305;Parent=Msa0269740-mRNA-1
chr2_3 exon 759106 759190 759106 ID=Msa0269740-mRNA-1:exon:304;Parent=Msa0269740-mRNA-1
chr2_3 exon 759280 759396 759280 ID=Msa0269740-mRNA-1:exon:303;Parent=Msa0269740-mRNA-1
chr2_3 exon 759533 759685 759533 ID=Msa0269740-mRNA-1:exon:302;Parent=Msa0269740-mRNA-1
chr2_3 exon 760521 760978 760521 ID=Msa0269740-mRNA-1:exon:301;Parent=Msa0269740-mRNA-1
chr2_3 five_prime_UTR 760601 760978 760601 ID=Msa0269740-mRNA-1:five_prime_utr;Parent=Msa0269740-mRNA-1
chr2_3 CDS 760521 760600 760521 ID=Msa0269740-mRNA-1:cds;Parent=Msa0269740-mRNA-1
chr2_3 CDS 759533 759685 759533 ID=Msa0269740-mRNA-1:cds;Parent=Msa0269740-mRNA-1
chr2_3 CDS 759280 759396 759280 ID=Msa0269740-mRNA-1:cds;Parent=Msa0269740-mRNA-1
chr2_3 CDS 759106 759190 759106 ID=Msa0269740-mRNA-1:cds;Parent=Msa0269740-mRNA-1
chr2_3 CDS 758057 758165 758057 ID=Msa0269740-mRNA-1:cds;Parent=Msa0269740-mRNA-1
chr2_3 CDS 757882 757949 757882 ID=Msa0269740-mRNA-1:cds;Parent=Msa0269740-mRNA-1
chr2_3 CDS 757628 757753 757628 ID=Msa0269740-mRNA-1:cds;Parent=Msa0269740-mRNA-1
chr2_3 CDS 756625 757526 756625 ID=Msa0269740-mRNA-1:cds;Parent=Msa0269740-mRNA-1
chr2_3 CDS 756173 756373 756173 ID=Msa0269740-mRNA-1:cds;Parent=Msa0269740-mRNA-1
chr2_3 CDS 756003 756063 756003 ID=Msa0269740-mRNA-1:cds;Parent=Msa0269740-mRNA-1
chr2_3 CDS 754655 754768 754655 ID=Msa0269740-mRNA-1:cds;Parent=Msa0269740-mRNA-1
chr2_3 CDS 753985 754098 753985 ID=Msa0269740-mRNA-1:cds;Parent=Msa0269740-mRNA-1
chr2_3 CDS 753807 753908 753807 ID=Msa0269740-mRNA-1:cds;Parent=Msa0269740-mRNA-1
chr2_3 three_prime_UTR 753515 753806 753515 ID=Msa0269740-mRNA-1:three_prime_utr;Parent=Msa0269740-mRNA-1
Gene Sequence

>Msa0269740

ATGGAATTTTCCATGGAATCAGCGGAACTTCATCCTCTGTGTCATGATCAACCCTCATCCTCCCAGAATTCCAACACCAGTGGTAGAAATGTCTTCAGTTTGCTAGCTCAAAGAGAGATTTCACCTAGAAACAAGCATGTACGAAAGTGTCACTGGGGAGAATCTTCTGAATCAAAATCTGGCTGTTCTCGTTCTAGAACAGTGGTAGATGCAAAGTGTGGTCTCCTCTCATGGGTCGAGGCTGAGTCATTGCAGCATTTGTCAGCCAAGTATTGCCCTTTATTGCCTGCCCCACGGTCTACTATTGCTGCAGCATTTAGTCCAGATGGGAAAATTCTTGCCTCCACACATGGTGACCACACAGTTAAGATCATTGATTGTGAAACTGGAAATTGCTTGAAGGTATTAGTTGGCCACAGAAGGACGCCTTGGGTGGTTAGGTTCCATCCATTGCAACGACAGATACTTGCTAGTGGGAGTTTGGACCAAGAAGTTCGTTTATGGGATGCTAGCTCATCAGAGTGGATTTTATCTCACTATTTTTATCGCCCTATTGCATCTCTCGCTTTCCATGCCAATGGGGAAATAATTGCTGTTGCATCAGGTCACAAGTTGTACGTGTGGCACTACAAAAATGCAAGGGAATTATCTTCACCAGTATTTGTGTTGAAGACAAGGCGCTCGCTACGGGCTGTGCATTTTCACCCGCATGGGGCACCATATCTTTTAACTGCTCAGGTCAATGATCTCAACTCTTCAGATTGCTCAATGACAGAGGCAACATCTCATGGTCATTTAGAATATCCTCCACCGGCTGTTTTTGTCACAAATGTTCATCCCAGGACGCAGATCAACATGTCAAGTGAACCACCAGTGTCAAGAGTTGAATTGCAGCATGCTAGTAACGATGTTGGTTTGAGTAGCATGCAGGTTGAACAATACGGTACTCGATTGTCAAACTCCGAGATACCCACTAGCTCTCAAACCGGAGCAGAATATAATGGCCATACTACTTTGCCTAATCAAATGAGAATTGGCATCAATAACCTCACAATGGGTGGTAGGGAGGCTTATGAAACAGAACCAGCCGAAGCAAGCCAACATGAAAACGCTGATCATGTTGTAAAACGCGTTGAACTCTCTGAGCTTGGTCAATTTCCTCAGATTGTTCCGTCACCAGATTCTAATGGATGGGAGCTGCCTTTTCTGCAAGGATGGTTAGTCGGTCAAAGCCAAGTTGGTGTTCCCTCAATGCTTCCTCAACAGATTGGTTCTTTCACTATGCCATCTAATCTGTTCACCACCAATGTTGAGCTAGCTGTGCCACCTTCAGGAATGCCCAATGGCATCAGCATACCTGCAGTTTTACAATCAGGTTTACAGAATCAATTTTCACCATCCCGTTTACCTGTAACTGATTTTGGCAATCTCGTTCCTTCTATTAATTTGCCGCATGATGGGTTTGATAGCCAAACCATTATAAATCGAATCCAGTCAGAACTTGCCAAATCAGTGGCCACTGCAGCTGCTACAGAATTACCTTGCACTGTTAACTTAAAAGTATGGTCATATGACTTAAAAAATCCCTGCGCCCCACTACAAAGATGCCGTCTAACTATACCACATGTCGTCCTCTGCAGTGAAATGGGTGCCCATTTTTCACCATGTGGTAGATTTTTAGCCGCCTGTGTTGCATGTATGCACCCTCATATGGAAGCTGATCCAGGATTACAAACTCTTGTACACCAGGAGCCTGGACTTCCAACATCACCAACTCGACATCCAATCTCAGCACATCAAGTAATGTATGAGCTCCGGATATATTCCCTGGAGGAAGCAACATTTGGATCGGTGCTTGTATCACGACCAATTAGAGCTGCTCATTGCCTGACTTCAATCCAGTTCTCGCCTACATCTGAGCATATTCTGCTCGCCTATGGTCGACGTCATAGCTCTCTTCTGAAAAGCATTGTCATTGATGGAGAAAAAACATCATCAATATATACAGTCTTGGAGGTATATAGAGTATCAGATATGGAACTTGTCAGGGTGCTTTCTAGTGCAGAGGATGAGGTCAATGTGGCATGCTTTCATCCTTTTCCTGGGGGAGGGCTTGTCTATGGAACCAAGGAAGGAAAGCTTAGGGTCTTCCAGTTTGACCGTACTTGTAATGTGAATGGCACTGGATCTGGTTACTTCCCTGAGGAGAACATGATTGGAGTCGATCAATGA
Protein sequence

>Msa0269740

MEFSMESAELHPLCHDQPSSSQNSNTSGRNVFSLLAQREISPRNKHVRKCHWGESSESKSGCSRSRTVVDAKCGLLSWVEAESLQHLSAKYCPLLPAPRSTIAAAFSPDGKILASTHGDHTVKIIDCETGNCLKVLVGHRRTPWVVRFHPLQRQILASGSLDQEVRLWDASSSEWILSHYFYRPIASLAFHANGEIIAVASGHKLYVWHYKNARELSSPVFVLKTRRSLRAVHFHPHGAPYLLTAQVNDLNSSDCSMTEATSHGHLEYPPPAVFVTNVHPRTQINMSSEPPVSRVELQHASNDVGLSSMQVEQYGTRLSNSEIPTSSQTGAEYNGHTTLPNQMRIGINNLTMGGREAYETEPAEASQHENADHVVKRVELSELGQFPQIVPSPDSNGWELPFLQGWLVGQSQVGVPSMLPQQIGSFTMPSNLFTTNVELAVPPSGMPNGISIPAVLQSGLQNQFSPSRLPVTDFGNLVPSINLPHDGFDSQTIINRIQSELAKSVATAAATELPCTVNLKVWSYDLKNPCAPLQRCRLTIPHVVLCSEMGAHFSPCGRFLAACVACMHPHMEADPGLQTLVHQEPGLPTSPTRHPISAHQVMYELRIYSLEEATFGSVLVSRPIRAAHCLTSIQFSPTSEHILLAYGRRHSSLLKSIVIDGEKTSSIYTVLEVYRVSDMELVRVLSSAEDEVNVACFHPFPGGGLVYGTKEGKLRVFQFDRTCNVNGTGSGYFPEENMIGVDQ*