Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1375260 | XP_013468408.1 | 98.654 | 743 | 10 | 0 | 1 | 743 | 1 | 743 | 0.0 | 1518 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1375260 | sp|Q9C0C7|AMRA1_HUMAN | 37.850 | 214 | 110 | 9 | 45 | 251 | 7 | 204 | 8.80e-29 | 127 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1375260 | A0A072VWJ3 | 98.654 | 743 | 10 | 0 | 1 | 743 | 1 | 743 | 0.0 | 1518 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0034560 | Msa1375260 | 0.822565 | 2.212939e-53 | -8.615850e-47 |
| Msa0035000 | Msa1375260 | 0.800558 | 1.362096e-48 | -8.615850e-47 |
| Msa0044240 | Msa1375260 | 0.801176 | 1.018839e-48 | -8.615850e-47 |
| Msa0046660 | Msa1375260 | 0.804269 | 2.342523e-49 | -8.615850e-47 |
| Msa0049650 | Msa1375260 | 0.830915 | 2.243578e-55 | -8.615850e-47 |
| Msa0074950 | Msa1375260 | 0.868675 | 5.473480e-66 | -8.615850e-47 |
| Msa0082490 | Msa1375260 | 0.808656 | 2.782679e-50 | -8.615850e-47 |
| Msa1375260 | Msa1395230 | 0.862156 | 6.185421e-64 | -8.615850e-47 |
| Msa1375260 | Msa1396750 | 0.840302 | 9.436238e-58 | -8.615850e-47 |
| Msa1375260 | Msa1400700 | 0.819356 | 1.212417e-52 | -8.615850e-47 |
| Msa1375260 | Msa1403930 | 0.819136 | 1.360964e-52 | -8.615850e-47 |
| Msa1375260 | Msa1410430 | 0.862537 | 4.725978e-64 | -8.615850e-47 |
| Msa0611180 | Msa1375260 | 0.866717 | 2.325108e-65 | -8.615850e-47 |
| Msa0611240 | Msa1375260 | 0.846160 | 2.586104e-59 | -8.615850e-47 |
| Msa0625530 | Msa1375260 | 0.820434 | 6.872866e-53 | -8.615850e-47 |
| Msa0642650 | Msa1375260 | -0.801404 | 9.150399e-49 | -8.615850e-47 |
| Msa0651520 | Msa1375260 | 0.844795 | 6.060419e-59 | -8.615850e-47 |
| Msa0694000 | Msa1375260 | 0.856472 | 3.143432e-62 | -8.615850e-47 |
| Msa0717920 | Msa1375260 | 0.841361 | 4.977829e-58 | -8.615850e-47 |
| Msa0813320 | Msa1375260 | 0.847669 | 9.992741e-60 | -8.615850e-47 |
| Msa0129790 | Msa1375260 | 0.841373 | 4.943750e-58 | -8.615850e-47 |
| Msa0167640 | Msa1375260 | 0.867117 | 1.732981e-65 | -8.615850e-47 |
| Msa0227020 | Msa1375260 | 0.852874 | 3.465695e-61 | -8.615850e-47 |
| Msa1253930 | Msa1375260 | 0.886568 | 3.053437e-72 | -8.615850e-47 |
| Msa1307660 | Msa1375260 | 0.879313 | 1.380364e-69 | -8.615850e-47 |
| Msa1030570 | Msa1375260 | 0.819320 | 1.235876e-52 | -8.615850e-47 |
| Msa1037060 | Msa1375260 | 0.821631 | 3.644266e-53 | -8.615850e-47 |
| Msa1064210 | Msa1375260 | -0.801692 | 7.985726e-49 | -8.615850e-47 |
| Msa1077940 | Msa1375260 | 0.803407 | 3.537572e-49 | -8.615850e-47 |
| Msa1079340 | Msa1375260 | 0.812696 | 3.722919e-51 | -8.615850e-47 |
| Msa1079370 | Msa1375260 | 0.808628 | 2.820863e-50 | -8.615850e-47 |
| Msa1105290 | Msa1375260 | -0.808197 | 3.485500e-50 | -8.615850e-47 |
| Msa0259860 | Msa1375260 | 0.863699 | 2.065837e-64 | -8.615850e-47 |
| Msa0269740 | Msa1375260 | 0.991217 | 1.723469e-186 | -8.615850e-47 |
| Msa0298940 | Msa1375260 | -0.819329 | 1.229600e-52 | -8.615850e-47 |
| Msa0305340 | Msa1375260 | 0.829952 | 3.859603e-55 | -8.615850e-47 |
| Msa0341460 | Msa1375260 | 0.826163 | 3.153380e-54 | -8.615850e-47 |
| Msa1129560 | Msa1375260 | -0.808628 | 2.820510e-50 | -8.615850e-47 |
| Msa1164800 | Msa1375260 | 0.823064 | 1.693668e-53 | -8.615850e-47 |
| Msa1166140 | Msa1375260 | 0.820283 | 7.443813e-53 | -8.615850e-47 |
| Msa1166240 | Msa1375260 | 0.819059 | 1.416860e-52 | -8.615850e-47 |
| Msa1168680 | Msa1375260 | 0.819087 | 1.396444e-52 | -8.615850e-47 |
| Msa1200880 | Msa1375260 | 0.867610 | 1.205786e-65 | -8.615850e-47 |
| Msa0524120 | Msa1375260 | -0.808566 | 2.907781e-50 | -8.615850e-47 |
| Msa0546380 | Msa1375260 | -0.809639 | 1.713028e-50 | -8.615850e-47 |
| Msa0577940 | Msa1375260 | 0.821968 | 3.044450e-53 | -8.615850e-47 |
| Msa0867050 | Msa1375260 | 0.859731 | 3.377716e-63 | -8.615850e-47 |
| Msa0930320 | Msa1375260 | 0.811484 | 6.840025e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1375260 | MtrunA17_Chr1g0183071 | 98.654 | 743 | 10 | 0 | 1 | 743 | 1 | 743 | 0.0 | 1518 |
| Msa1375260 | MtrunA17_Chr7g0262511 | 66.667 | 783 | 179 | 11 | 22 | 743 | 10 | 771 | 0.0 | 995 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1375260 | AT1G04140.1 | 54.293 | 757 | 297 | 12 | 29 | 741 | 32 | 783 | 0.0 | 771 |
| Msa1375260 | AT1G04140.2 | 54.222 | 758 | 298 | 12 | 29 | 742 | 32 | 784 | 0.0 | 770 |
| Msa1375260 | AT5G43930.2 | 55.850 | 718 | 273 | 11 | 28 | 729 | 34 | 723 | 0.0 | 746 |
| Msa1375260 | AT5G43930.3 | 55.850 | 718 | 273 | 11 | 28 | 729 | 34 | 723 | 0.0 | 746 |
| Msa1375260 | AT5G43930.1 | 55.850 | 718 | 273 | 11 | 28 | 729 | 34 | 723 | 0.0 | 746 |
| Msa1375260 | AT5G43930.4 | 53.898 | 744 | 273 | 13 | 28 | 729 | 34 | 749 | 0.0 | 728 |
| Msa1375260 | AT3G49660.1 | 28.571 | 182 | 116 | 7 | 105 | 277 | 78 | 254 | 3.82e-12 | 68.6 |
Find 223 sgRNAs with CRISPR-Local
Find 496 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTTTACCTGTAACTGATTT+TGG | 0.115003 | tig0019645:-156421 | Msa1375260:CDS |
| TTGGTTCTTGATTGAATTTA+TGG | 0.164239 | tig0019645:+160225 | None:intergenic |
| CATACCTGGTGTTGGAATTC+TGG | 0.178980 | tig0019645:+160099 | None:intergenic |
| TTTCGTACATGCTTGTTTCT+AGG | 0.214459 | tig0019645:+159201 | None:intergenic |
| TGGACCAAGAAGTTCGTTTA+TGG | 0.217778 | tig0019645:-157677 | Msa1375260:CDS |
| AGAACTAGAAGAATCGAATT+TGG | 0.268634 | tig0019645:+160377 | None:intergenic |
| GACCGTGGGGCAGGCAATAA+AGG | 0.268914 | tig0019645:+158912 | None:intergenic |
| AAGGATCAAATCTGAGAAAT+TGG | 0.269191 | tig0019645:+160206 | None:intergenic |
| TCACCCTTTCCTTCTGCTCT+TGG | 0.281689 | tig0019645:-153326 | Msa1375260:three_prime_UTR |
| TATATCATGTGTCCTGAAAA+TGG | 0.283329 | tig0019645:+153259 | None:intergenic |
| AAGATCATTGATTGTGAAAC+TGG | 0.287636 | tig0019645:-158733 | Msa1375260:CDS |
| ATATCTATATATTGGTGTTT+AGG | 0.299581 | tig0019645:+160331 | None:intergenic |
| GAACTAGAAGAATCGAATTT+GGG | 0.304768 | tig0019645:+160378 | None:intergenic |
| CTGAAAAGCATTGTCATTGA+TGG | 0.314557 | tig0019645:-154319 | Msa1375260:CDS |
| GAGCTAGCTGTGCCACCTTC+AGG | 0.320449 | tig0019645:-156511 | Msa1375260:CDS |
| GATACTTGCTAGTGGGAGTT+TGG | 0.320714 | tig0019645:-157697 | Msa1375260:CDS |
| AGCTGCAGTGGCCACTGATT+TGG | 0.321943 | tig0019645:+156318 | None:intergenic |
| CGACTGGATTCGATTTATAA+TGG | 0.323236 | tig0019645:+156348 | None:intergenic |
| TTTGATTAGGCAAAGTAGTA+TGG | 0.323889 | tig0019645:+156818 | None:intergenic |
| CTCTCTCTATATCTATATAT+TGG | 0.325950 | tig0019645:+160323 | None:intergenic |
| ATGCCAATTCTCATTTGATT+AGG | 0.329540 | tig0019645:+156805 | None:intergenic |
| GCACTGTTAACTTAAAAGTA+TGG | 0.343310 | tig0019645:-156279 | Msa1375260:CDS |
| CATCCCATAAACGAACTTCT+TGG | 0.352429 | tig0019645:+157673 | None:intergenic |
| GGACCAAGAAGTTCGTTTAT+GGG | 0.353088 | tig0019645:-157676 | Msa1375260:CDS |
| CAACTGTGTTTGCAGTGAAA+TGG | 0.357749 | tig0019645:-155946 | Msa1375260:intron |
| AGGCAATGAGCAGCTCTAAT+TGG | 0.358191 | tig0019645:+155596 | None:intergenic |
| TGACATGTTGATCTGCGTCC+TGG | 0.364210 | tig0019645:+156984 | None:intergenic |
| CTCTCGCTTTCCATGCCAAT+GGG | 0.366859 | tig0019645:-157492 | Msa1375260:CDS |
| TTGCCTAATCAAATGAGAAT+TGG | 0.367098 | tig0019645:-156808 | Msa1375260:CDS |
| CAAAATCAGTTACAGGTAAA+CGG | 0.375548 | tig0019645:+156422 | None:intergenic |
| ATACCTGGTGTTGGAATTCT+GGG | 0.377546 | tig0019645:+160100 | None:intergenic |
| TATCAGATATGGAACTTGTC+AGG | 0.380466 | tig0019645:-153696 | Msa1375260:CDS |
| CATTACAAGTACGGTCAAAC+TGG | 0.380771 | tig0019645:+153496 | None:intergenic |
| GAATCTTCTGAATCAAAATC+TGG | 0.390715 | tig0019645:-159165 | Msa1375260:CDS |
| GTTGGAATTCTGGGAGGATG+AGG | 0.392412 | tig0019645:+160109 | None:intergenic |
| TTCCCTGAGGAGAACATGAT+TGG | 0.394808 | tig0019645:-153450 | Msa1375260:CDS |
| GGATTCGATTTATAATGGTT+TGG | 0.398188 | tig0019645:+156353 | None:intergenic |
| GAAATAATTGCTGTTGCATC+AGG | 0.399592 | tig0019645:-157469 | Msa1375260:CDS |
| GTTCCGTCACCAGATTCTAA+TGG | 0.400356 | tig0019645:-156655 | Msa1375260:CDS |
| ACCTGAGCAGTTAAAAGATA+TGG | 0.402129 | tig0019645:+157206 | None:intergenic |
| TCATGTTGGCTTGCTTCGGC+TGG | 0.407111 | tig0019645:+156739 | None:intergenic |
| AGATTGCCAAAATCAGTTAC+AGG | 0.408627 | tig0019645:+156415 | None:intergenic |
| ACAAAGTTTCTCTCTCTCTA+AGG | 0.420690 | tig0019645:+160288 | None:intergenic |
| CCTGGATCAGCTTCCATATG+AGG | 0.422073 | tig0019645:+155867 | None:intergenic |
| ATTACTTGATGTGCTGAGAT+TGG | 0.422477 | tig0019645:+155789 | None:intergenic |
| CCTCATATGGAAGCTGATCC+AGG | 0.426677 | tig0019645:-155867 | Msa1375260:CDS |
| GGTATATAGAGTATCAGATA+TGG | 0.427126 | tig0019645:-153707 | Msa1375260:CDS |
| GCATCTTTGTAGTGGGGCGC+AGG | 0.430270 | tig0019645:+156237 | None:intergenic |
| CTGATTTGGCAAGTTCCGAC+TGG | 0.435137 | tig0019645:+156332 | None:intergenic |
| TCTATTAATTTGCCGCATGA+TGG | 0.442110 | tig0019645:-156385 | Msa1375260:CDS |
| AACTGTGTTTGCAGTGAAAT+GGG | 0.443834 | tig0019645:-155945 | Msa1375260:intron |
| ACTCCAATCATGTTCTCCTC+AGG | 0.445874 | tig0019645:+153447 | None:intergenic |
| TTGGAATTCTGGGAGGATGA+GGG | 0.446295 | tig0019645:+160110 | None:intergenic |
| CAAACCGGAGCAGAATATAA+TGG | 0.448038 | tig0019645:-156841 | Msa1375260:CDS |
| CAAGAAAGGTTTCTATATCA+TGG | 0.453405 | tig0019645:-153282 | Msa1375260:three_prime_UTR |
| TCATGCGGCAAATTAATAGA+AGG | 0.456728 | tig0019645:+156388 | None:intergenic |
| AGCATGTACGAAAGTGTCAC+TGG | 0.459638 | tig0019645:-159191 | Msa1375260:CDS |
| TGCATGTATGCACCCTCATA+TGG | 0.459866 | tig0019645:-155880 | Msa1375260:CDS |
| CGCGTTGAACTCTCTGAGCT+TGG | 0.460612 | tig0019645:-156694 | Msa1375260:CDS |
| CTTGTCTTCAACACAAATAC+TGG | 0.462774 | tig0019645:+157269 | None:intergenic |
| AAAATCAGTTACAGGTAAAC+GGG | 0.463268 | tig0019645:+156423 | None:intergenic |
| GAAGACAAGGCGCTCGCTAC+GGG | 0.464062 | tig0019645:-157255 | Msa1375260:CDS |
| ATCTGTTGAGGAAGCATTGA+GGG | 0.465688 | tig0019645:+156577 | None:intergenic |
| AGCTCCCATCCATTAGAATC+TGG | 0.465836 | tig0019645:+156646 | None:intergenic |
| AATTGCTTGAAGGTATTAGT+TGG | 0.468045 | tig0019645:-158709 | Msa1375260:CDS |
| TGTACAAGAGTTTGTAATCC+TGG | 0.469949 | tig0019645:+155849 | None:intergenic |
| GGATGTCGAGTTGGTGATGT+TGG | 0.470361 | tig0019645:+155810 | None:intergenic |
| AATGTGAATGGCACTGGATC+TGG | 0.470886 | tig0019645:-153477 | Msa1375260:CDS |
| TGGAAAGCGAGAGATGCAAT+AGG | 0.471210 | tig0019645:+157502 | None:intergenic |
| TCAATGCTTCCTCAACAGAT+TGG | 0.475654 | tig0019645:-156574 | Msa1375260:CDS |
| AGTCGTACGTTGCTTCCTCC+AGG | 0.477811 | tig0019645:+155745 | None:intergenic |
| TTGAACAGTCAAAGCAAGAA+AGG | 0.478577 | tig0019645:-153296 | Msa1375260:three_prime_UTR |
| TGAGCTCCGGATATATTCCC+TGG | 0.480311 | tig0019645:-155763 | Msa1375260:CDS |
| GGTTGTAGGAAGGAAAGCTT+AGG | 0.485120 | tig0019645:-153524 | Msa1375260:intron |
| CTATTAATTTGCCGCATGAT+GGG | 0.485445 | tig0019645:-156384 | Msa1375260:CDS |
| ACCGTGGGGCAGGCAATAAA+GGG | 0.486720 | tig0019645:+158913 | None:intergenic |
| CTTCCTCCAGGGAATATATC+CGG | 0.487419 | tig0019645:+155757 | None:intergenic |
| AAATTTGATTTCCAGGGTCG+AGG | 0.494344 | tig0019645:-158970 | Msa1375260:intron |
| TCATTGCCTGACTTCAATCC+AGG | 0.496863 | tig0019645:-155582 | Msa1375260:intron |
| AACTGACCTGGATTGAAGTC+AGG | 0.498949 | tig0019645:+155576 | None:intergenic |
| GACATGTTGATCTGCGTCCT+GGG | 0.499424 | tig0019645:+156985 | None:intergenic |
| GGAAAATTCATACCTGGTGT+TGG | 0.500969 | tig0019645:+160091 | None:intergenic |
| ATCATCAATATATACAGTCT+TGG | 0.501445 | tig0019645:-154287 | Msa1375260:CDS |
| ATCAAGTAATGTATGAGCTC+CGG | 0.501752 | tig0019645:-155776 | Msa1375260:CDS |
| ATGTTGGAAGTCCAGGCTCC+TGG | 0.502548 | tig0019645:+155826 | None:intergenic |
| AGGCAATAAAGGGCAATACT+TGG | 0.503801 | tig0019645:+158923 | None:intergenic |
| ATGAAGTTCCGCTGATTCCA+TGG | 0.504022 | tig0019645:+160151 | None:intergenic |
| GTTGGTGATGTTGGAAGTCC+AGG | 0.505185 | tig0019645:+155819 | None:intergenic |
| GGCATCAATAACCTCACAAT+GGG | 0.506104 | tig0019645:-156787 | Msa1375260:CDS |
| GAATTGAGATTAAAGAAAGA+AGG | 0.506659 | tig0019645:+160187 | None:intergenic |
| TTGGTGTTTAGGAGGAATAA+CGG | 0.507182 | tig0019645:+160342 | None:intergenic |
| GCCCTTTATTGCCTGCCCCA+CGG | 0.507234 | tig0019645:-158914 | Msa1375260:CDS |
| AACAGCAATTATTTCCCCAT+TGG | 0.507326 | tig0019645:+157477 | None:intergenic |
| GAGCATATTCTGCTCGCCTA+TGG | 0.507585 | tig0019645:-154361 | Msa1375260:CDS |
| ACTAACCATCCTTGCAGAAA+AGG | 0.507866 | tig0019645:+156622 | None:intergenic |
| CAAAGTGTGGTCTCCTCTCA+TGG | 0.508856 | tig0019645:-159113 | Msa1375260:intron |
| TGAAGACAAGGCGCTCGCTA+CGG | 0.509890 | tig0019645:-157256 | Msa1375260:CDS |
| TGCAGGTATGCTGATGCCAT+TGG | 0.509948 | tig0019645:+156483 | None:intergenic |
| CAATTATTTCCCCATTGGCA+TGG | 0.510982 | tig0019645:+157482 | None:intergenic |
| TTGGCCACAGAAGGACGCCT+TGG | 0.512523 | tig0019645:-158690 | Msa1375260:CDS |
| TGGCCACAGAAGGACGCCTT+GGG | 0.514365 | tig0019645:-158689 | Msa1375260:CDS |
| TCTATATATTGGTGTTTAGG+AGG | 0.517216 | tig0019645:+160334 | None:intergenic |
| TGTTTCGTTAACAACACAAA+CGG | 0.517284 | tig0019645:-160254 | Msa1375260:five_prime_UTR |
| GCTTTCTAGTGCAGAGGATG+AGG | 0.517539 | tig0019645:-153671 | Msa1375260:CDS |
| ACTCTTGTACACCAGGAGCC+TGG | 0.517642 | tig0019645:-155837 | Msa1375260:CDS |
| AGAGCTATGACGTCGACCAT+AGG | 0.518312 | tig0019645:+154345 | None:intergenic |
| TCTCTCGCTTTCCATGCCAA+TGG | 0.519282 | tig0019645:-157493 | Msa1375260:CDS |
| GACCGTACTTGTAATGTGAA+TGG | 0.523270 | tig0019645:-153489 | Msa1375260:CDS |
| TAACCAAGAGCAGAAGGAAA+GGG | 0.524017 | tig0019645:+153323 | None:intergenic |
| GGAAAGCGAGAGATGCAATA+GGG | 0.526031 | tig0019645:+157503 | None:intergenic |
| CGTCACCAGATTCTAATGGA+TGG | 0.526206 | tig0019645:-156651 | Msa1375260:CDS |
| CAGCATGCTAGTAACGATGT+TGG | 0.526306 | tig0019645:-156931 | Msa1375260:CDS |
| TCTTTAATCTCAATTCTCCA+TGG | 0.526509 | tig0019645:-160180 | Msa1375260:exon |
| TTAGACGGCATCTTTGTAGT+GGG | 0.528947 | tig0019645:+156230 | None:intergenic |
| AATAATTAACCAAGAGCAGA+AGG | 0.530368 | tig0019645:+153317 | None:intergenic |
| TAACCTCACAATGGGTGGTA+GGG | 0.531061 | tig0019645:-156779 | Msa1375260:CDS |
| GTATCTGTCGTTGCAATGGA+TGG | 0.531769 | tig0019645:+157715 | None:intergenic |
| GCAATAGTAGACCGTGGGGC+AGG | 0.533067 | tig0019645:+158903 | None:intergenic |
| TTGTCACAAATGTTCATCCC+AGG | 0.536231 | tig0019645:-157002 | Msa1375260:CDS |
| TGCTCCGGTTTGAGAGCTAG+TGG | 0.536252 | tig0019645:+156852 | None:intergenic |
| ATCAATATATACAGTCTTGG+AGG | 0.536387 | tig0019645:-154284 | Msa1375260:intron |
| TACCACATGTCGTCCTCTGC+AGG | 0.539111 | tig0019645:-156204 | Msa1375260:intron |
| GCTGCAGCATTTAGTCCAGA+TGG | 0.539276 | tig0019645:-158882 | Msa1375260:CDS |
| TGAAACTGGAAATTGCTTGA+AGG | 0.539434 | tig0019645:-158719 | Msa1375260:CDS |
| AGGTATTAGTTGGCCACAGA+AGG | 0.539720 | tig0019645:-158699 | Msa1375260:CDS |
| TTGGTGGTGAACAGATTAGA+TGG | 0.541889 | tig0019645:+156538 | None:intergenic |
| ATGGCCATTATATTCTGCTC+CGG | 0.541908 | tig0019645:+156837 | None:intergenic |
| CCACCCAAGGCGTCCTTCTG+TGG | 0.544228 | tig0019645:+158686 | None:intergenic |
| ACTTGTAATGTGAATGGCAC+TGG | 0.544885 | tig0019645:-153483 | Msa1375260:CDS |
| GCAGGTATGCTGATGCCATT+GGG | 0.544979 | tig0019645:+156484 | None:intergenic |
| CACAGCTAGCTCAACATTGG+TGG | 0.546180 | tig0019645:+156522 | None:intergenic |
| AAAGATATGGTGCCCCATGC+GGG | 0.547922 | tig0019645:+157219 | None:intergenic |
| TTGAGAGCTAGTGGGTATCT+CGG | 0.549485 | tig0019645:+156861 | None:intergenic |
| GCAAGTATCTGTCGTTGCAA+TGG | 0.550367 | tig0019645:+157711 | None:intergenic |
| ATGACAGAGGCAACATCTCA+TGG | 0.552996 | tig0019645:-157054 | Msa1375260:CDS |
| ATCAATAACCTCACAATGGG+TGG | 0.553944 | tig0019645:-156784 | Msa1375260:CDS |
| CAGGGTGCTTTCTAGTGCAG+AGG | 0.555084 | tig0019645:-153677 | Msa1375260:CDS |
| ATATAGAGAGAGAAAGAAAG+AGG | 0.555174 | tig0019645:-160312 | Msa1375260:five_prime_UTR |
| ATAACCTCACAATGGGTGGT+AGG | 0.558003 | tig0019645:-156780 | Msa1375260:CDS |
| GTCACCAGATTCTAATGGAT+GGG | 0.560045 | tig0019645:-156650 | Msa1375260:CDS |
| TTAACCAAGAGCAGAAGGAA+AGG | 0.561620 | tig0019645:+153322 | None:intergenic |
| GCATTGAGGGAACACCAACT+TGG | 0.562253 | tig0019645:+156590 | None:intergenic |
| AAGTTACATGTGAAAATGTA+AGG | 0.563802 | tig0019645:-153221 | Msa1375260:three_prime_UTR |
| AAGATGATGACGTGGCGTCT+AGG | 0.564253 | tig0019645:+160446 | None:intergenic |
| CATCTTTGTAGTGGGGCGCA+GGG | 0.564972 | tig0019645:+156238 | None:intergenic |
| GTTAGACGGCATCTTTGTAG+TGG | 0.565047 | tig0019645:+156229 | None:intergenic |
| CAGTATTTGTGTTGAAGACA+AGG | 0.566784 | tig0019645:-157268 | Msa1375260:CDS |
| TGCCATTCACATTACAAGTA+CGG | 0.568037 | tig0019645:+153487 | None:intergenic |
| TTTCTGCAAGGATGGTTAGT+CGG | 0.570950 | tig0019645:-156619 | Msa1375260:CDS |
| CTCCAATCATGTTCTCCTCA+GGG | 0.571222 | tig0019645:+153448 | None:intergenic |
| ATCAAAGACATGGATGATGT+TGG | 0.572883 | tig0019645:+160512 | None:intergenic |
| ATGCCATTGGGCATTCCTGA+AGG | 0.574190 | tig0019645:+156496 | None:intergenic |
| CTGCAGCATTTAGTCCAGAT+GGG | 0.574217 | tig0019645:-158881 | Msa1375260:CDS |
| AAGCCAAAGCTTACCACCCA+AGG | 0.576210 | tig0019645:+158673 | None:intergenic |
| AAACCTGATTGTAAAACTGC+AGG | 0.577206 | tig0019645:+156466 | None:intergenic |
| ATACCCACTAGCTCTCAAAC+CGG | 0.582499 | tig0019645:-156856 | Msa1375260:CDS |
| CTGTTCTCGTTCTAGAACAG+TGG | 0.583294 | tig0019645:-159142 | Msa1375260:CDS |
| CTGCAGCAATAGTAGACCGT+GGG | 0.583872 | tig0019645:+158898 | None:intergenic |
| TGCTGTTGCATCAGGTCACA+AGG | 0.586241 | tig0019645:-157461 | Msa1375260:intron |
| GTGAAAGAACCAATCTGTTG+AGG | 0.587730 | tig0019645:+156565 | None:intergenic |
| CTGGATCAGCTTCCATATGA+GGG | 0.589361 | tig0019645:+155868 | None:intergenic |
| TGATTCCATGGAAAATTCCA+TGG | 0.590591 | tig0019645:+160163 | None:intergenic |
| TGTTGGTTTGAGTAGCATGC+AGG | 0.590711 | tig0019645:-156914 | Msa1375260:CDS |
| AATTCAACTCTTGACACTGG+TGG | 0.591913 | tig0019645:+156955 | None:intergenic |
| TAATTCTGTAGCAGCTGCAG+TGG | 0.593424 | tig0019645:+156306 | None:intergenic |
| GCTCCGGTTTGAGAGCTAGT+GGG | 0.596135 | tig0019645:+156853 | None:intergenic |
| TCTGGTGACGGAACAATCTG+AGG | 0.598901 | tig0019645:+156664 | None:intergenic |
| CCTCCCAGAATTCCAACACC+AGG | 0.599555 | tig0019645:-160103 | Msa1375260:intron |
| CGACATGTGGTATAGTTAGA+CGG | 0.600026 | tig0019645:+156215 | None:intergenic |
| ATCAGATATGGAACTTGTCA+GGG | 0.600976 | tig0019645:-153695 | Msa1375260:CDS |
| AAAAGATATGGTGCCCCATG+CGG | 0.601223 | tig0019645:+157218 | None:intergenic |
| GTCGTACGTTGCTTCCTCCA+GGG | 0.604411 | tig0019645:+155746 | None:intergenic |
| CCTCACAATGGGTGGTAGGG+AGG | 0.605498 | tig0019645:-156776 | Msa1375260:CDS |
| AGCAGAATATGCTCAGATGT+AGG | 0.609510 | tig0019645:+154370 | None:intergenic |
| ATTACAAACTCTTGTACACC+AGG | 0.610235 | tig0019645:-155844 | Msa1375260:CDS |
| TCATTTAGAATATCCTCCAC+CGG | 0.610636 | tig0019645:-157031 | Msa1375260:CDS |
| CAAGTATGTTGTACATTATG+CGG | 0.612352 | tig0019645:-153165 | Msa1375260:three_prime_UTR |
| TAGAAGAATCGAATTTGGGG+TGG | 0.616324 | tig0019645:+160382 | None:intergenic |
| AGCATGCAGGTTGAACAATA+CGG | 0.618359 | tig0019645:-156901 | Msa1375260:CDS |
| CCACAGAAGGACGCCTTGGG+TGG | 0.618769 | tig0019645:-158686 | Msa1375260:intron |
| GCATGTACGAAAGTGTCACT+GGG | 0.618857 | tig0019645:-159190 | Msa1375260:CDS |
| CCACCTTCAGGAATGCCCAA+TGG | 0.620224 | tig0019645:-156499 | Msa1375260:CDS |
| CATTATAAATCGAATCCAGT+CGG | 0.622471 | tig0019645:-156347 | Msa1375260:CDS |
| TGGCACAGCTAGCTCAACAT+TGG | 0.624707 | tig0019645:+156519 | None:intergenic |
| GTCGGAACTTGCCAAATCAG+TGG | 0.625008 | tig0019645:-156329 | Msa1375260:CDS |
| AATCTGTTGAGGAAGCATTG+AGG | 0.627493 | tig0019645:+156576 | None:intergenic |
| CCATTGGGCATTCCTGAAGG+TGG | 0.630429 | tig0019645:+156499 | None:intergenic |
| TGGCATCAATAACCTCACAA+TGG | 0.635026 | tig0019645:-156788 | Msa1375260:CDS |
| TCAGTTACAGGTAAACGGGA+TGG | 0.636538 | tig0019645:+156427 | None:intergenic |
| AACGACAGATACTTGCTAGT+GGG | 0.637390 | tig0019645:-157704 | Msa1375260:CDS |
| GCTGAGATTGGATGTCGAGT+TGG | 0.638438 | tig0019645:+155801 | None:intergenic |
| CAACGACAGATACTTGCTAG+TGG | 0.639744 | tig0019645:-157705 | Msa1375260:CDS |
| TGCAATTCAACTCTTGACAC+TGG | 0.641673 | tig0019645:+156952 | None:intergenic |
| TTCAGATTGCTCAATGACAG+AGG | 0.641679 | tig0019645:-157067 | Msa1375260:CDS |
| ACTTCAGAAGGTACCTGCAG+AGG | 0.645206 | tig0019645:+156191 | None:intergenic |
| AACTAGAAGAATCGAATTTG+GGG | 0.645970 | tig0019645:+160379 | None:intergenic |
| AGTTGTGTAAGTACCATGAG+AGG | 0.649049 | tig0019645:+159100 | None:intergenic |
| TACTGTGTCAGTTGTACGTG+TGG | 0.650194 | tig0019645:-157322 | Msa1375260:intron |
| TAGACGGCATCTTTGTAGTG+GGG | 0.650831 | tig0019645:+156231 | None:intergenic |
| AATTGCAACTTACTGTGTGG+AGG | 0.655631 | tig0019645:+158848 | None:intergenic |
| GTTGTAGGAAGGAAAGCTTA+GGG | 0.656714 | tig0019645:-153523 | Msa1375260:intron |
| CCTCCCTACCACCCATTGTG+AGG | 0.659125 | tig0019645:+156776 | None:intergenic |
| TGTACTTTGAATCAAAGACA+TGG | 0.662048 | tig0019645:+160502 | None:intergenic |
| TTGGAGTCGATCAATGAGCA+AGG | 0.667619 | tig0019645:-153431 | Msa1375260:exon |
| CATCCATTAGAATCTGGTGA+CGG | 0.670518 | tig0019645:+156652 | None:intergenic |
| TTAGTCGGTCAAAGCCAAGT+TGG | 0.670959 | tig0019645:-156604 | Msa1375260:CDS |
| TACCTGCAGAGGACGACATG+TGG | 0.671719 | tig0019645:+156202 | None:intergenic |
| TGCAGAGGATGAGGTCAATG+TGG | 0.674617 | tig0019645:-153662 | Msa1375260:CDS |
| GCTGCAGCAATAGTAGACCG+TGG | 0.674851 | tig0019645:+158897 | None:intergenic |
| AGGGTGCATACATGCAACAC+AGG | 0.677223 | tig0019645:+155887 | None:intergenic |
| TGGCTATCAAACCCATCATG+CGG | 0.678387 | tig0019645:+156373 | None:intergenic |
| GTGCATACATGCAACACAGG+CGG | 0.681773 | tig0019645:+155890 | None:intergenic |
| TCTCGCTTTCCATGCCAATG+GGG | 0.682220 | tig0019645:-157491 | Msa1375260:CDS |
| AATCAATGATCTTAACTGTG+TGG | 0.684417 | tig0019645:+158743 | None:intergenic |
| AGGGCTTGTCTATGGAACCA+AGG | 0.695022 | tig0019645:-153614 | Msa1375260:intron |
| GGGATGCTAGCTCATCAGAG+TGG | 0.698330 | tig0019645:-157656 | Msa1375260:CDS |
| TGGATCTGGTTACTTCCCTG+AGG | 0.705098 | tig0019645:-153463 | Msa1375260:CDS |
| ACAGTGGTAGATGCAAAGTG+TGG | 0.719121 | tig0019645:-159126 | Msa1375260:CDS |
| TGCAGCAATAGTAGACCGTG+GGG | 0.726709 | tig0019645:+158899 | None:intergenic |
| GAGGGTTGATCATGACACAG+AGG | 0.745622 | tig0019645:+160128 | None:intergenic |
| GCTCCGGATATATTCCCTGG+AGG | 0.749636 | tig0019645:-155760 | Msa1375260:CDS |
| CCTGGTGTTGGAATTCTGGG+AGG | 0.755260 | tig0019645:+160103 | None:intergenic |
| CATGTACGAAAGTGTCACTG+GGG | 0.771233 | tig0019645:-159189 | Msa1375260:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATTTTTATTTTTAAATT+TGG | - | tig0019645:154413-154432 | Msa1375260:intron | 0.0% |
| !!! | TTATTTTTATTTTTAAATTT+GGG | - | tig0019645:154414-154433 | Msa1375260:intron | 0.0% |
| !! | AACTTAAAAAAAAAATACTT+AGG | + | tig0019645:153734-153753 | None:intergenic | 10.0% |
| !! | TATAATCTCTATATAATTAT+TGG | - | tig0019645:159768-159787 | Msa1375260:intron | 10.0% |
| !!! | GATAATTTTCAAAAGTTTTT+GGG | + | tig0019645:153278-153297 | None:intergenic | 15.0% |
| !!! | AGATAATTTTCAAAAGTTTT+TGG | + | tig0019645:153279-153298 | None:intergenic | 15.0% |
| !! | AATAACCACATAATTATTTA+GGG | + | tig0019645:153845-153864 | None:intergenic | 15.0% |
| !! | TAATAACCACATAATTATTT+AGG | + | tig0019645:153846-153865 | None:intergenic | 15.0% |
| !! | AAAATTACTTCAAAATACTT+AGG | + | tig0019645:153931-153950 | None:intergenic | 15.0% |
| !!! | ATCATTTTTTACAAGTTAAT+TGG | - | tig0019645:154039-154058 | Msa1375260:intron | 15.0% |
| !!! | TCATTTTTTACAAGTTAATT+GGG | - | tig0019645:154040-154059 | Msa1375260:intron | 15.0% |
| !! | TAAAAATAAAAAATCATGTG+AGG | + | tig0019645:154403-154422 | None:intergenic | 15.0% |
| !!! | ATTTTTAAATTTGATTTCCA+GGG | - | tig0019645:154708-154727 | Msa1375260:intron | 15.0% |
| !! | ATATAAAACTATTATTCACT+TGG | + | tig0019645:155108-155127 | None:intergenic | 15.0% |
| !!! | TATTTTGTTTAATTGTGATT+TGG | - | tig0019645:156333-156352 | Msa1375260:CDS | 15.0% |
| !!! | CTATAAAAACTATTACTTTT+TGG | - | tig0019645:156539-156558 | Msa1375260:CDS | 15.0% |
| !!! | ATAAATTTTAATGATATGCT+TGG | + | tig0019645:158021-158040 | None:intergenic | 15.0% |
| !!! | TGAATACATTATTCTTTTTT+TGG | - | tig0019645:158187-158206 | Msa1375260:intron | 15.0% |
| !!! | GAATACATTATTCTTTTTTT+GGG | - | tig0019645:158188-158207 | Msa1375260:intron | 15.0% |
| !!! | CTCTTTTTTATTTTATTTTG+AGG | + | tig0019645:158263-158282 | None:intergenic | 15.0% |
| !! | CTCAAAATAAAATAAAAAAG+AGG | - | tig0019645:158261-158280 | Msa1375260:intron | 15.0% |
| !! | TTCAAAAATTTAAAGGTTTA+AGG | + | tig0019645:158359-158378 | None:intergenic | 15.0% |
| !! | AAAATAGAAATATGATTATG+AGG | + | tig0019645:158935-158954 | None:intergenic | 15.0% |
| !!! | AATCAAAAAATTACTTTTCT+TGG | - | tig0019645:159249-159268 | Msa1375260:intron | 15.0% |
| !!! | AATGCACTTATTTTTTTTTA+TGG | - | tig0019645:159645-159664 | Msa1375260:intron | 15.0% |
| !!! | ATGCACTTATTTTTTTTTAT+GGG | - | tig0019645:159646-159665 | Msa1375260:intron | 15.0% |
| !!! | ATTTTAATTTTATTTTCCTG+TGG | - | tig0019645:160320-160339 | Msa1375260:five_prime_UTR | 15.0% |
| !!! | ATATCTATATATTGGTGTTT+AGG | + | tig0019645:153356-153375 | None:intergenic | 20.0% |
| !! | GAATATTAACAAAGAAGATA+TGG | + | tig0019645:153617-153636 | None:intergenic | 20.0% |
| !! | TTAAACCCTAAATAATTATG+TGG | - | tig0019645:153837-153856 | Msa1375260:intron | 20.0% |
| !!! | GTTAAATTTTGAAGTTGAAT+TGG | - | tig0019645:153904-153923 | Msa1375260:intron | 20.0% |
| !!! | CATTTTTAAATTTGATTTCC+AGG | - | tig0019645:154707-154726 | Msa1375260:intron | 20.0% |
| !! | AAAAGAAATGAAAAGGAAAA+AGG | + | tig0019645:155052-155071 | None:intergenic | 20.0% |
| !! | AATAAACTAATTGATCAAGT+CGG | + | tig0019645:155205-155224 | None:intergenic | 20.0% |
| !!! | TTACTTAACTTCCTTTTATT+AGG | + | tig0019645:155342-155361 | None:intergenic | 20.0% |
| !! | ATATATCTCATCAAACTTAA+TGG | + | tig0019645:155423-155442 | None:intergenic | 20.0% |
| !!! | TTTGATTCTTTTGTACTTTT+TGG | - | tig0019645:155724-155743 | Msa1375260:intron | 20.0% |
| !!! | TTGATTCTTTTGTACTTTTT+GGG | - | tig0019645:155725-155744 | Msa1375260:intron | 20.0% |
| !!! | TTGTTTTTATAGTCTTCATT+TGG | - | tig0019645:155915-155934 | Msa1375260:CDS | 20.0% |
| !!! | ATTTGGAATAATGTGTTAAT+CGG | - | tig0019645:155932-155951 | Msa1375260:CDS | 20.0% |
| !! | ATGTGATTAACAATAGAAAA+GGG | + | tig0019645:156093-156112 | None:intergenic | 20.0% |
| !! | AATGTGATTAACAATAGAAA+AGG | + | tig0019645:156094-156113 | None:intergenic | 20.0% |
| !! | AAAGTTGTTATAGAAATGTT+TGG | - | tig0019645:157668-157687 | Msa1375260:CDS | 20.0% |
| !!! | TACATTTCTTTTAACAGATT+TGG | - | tig0019645:158046-158065 | Msa1375260:intron | 20.0% |
| !! | TAAGGATAATTAATCCAAAT+TGG | + | tig0019645:158341-158360 | None:intergenic | 20.0% |
| !! | TGCTAAAAAATTCAAAATTG+TGG | + | tig0019645:158427-158446 | None:intergenic | 20.0% |
| !!! | TTACTTTCATATTGAACTTT+TGG | + | tig0019645:158481-158500 | None:intergenic | 20.0% |
| !! | ATATGAAAGTAATGAAAATC+TGG | - | tig0019645:158489-158508 | Msa1375260:intron | 20.0% |
| !!! | TTTTTGTGTCAAAAAAACAA+GGG | + | tig0019645:158739-158758 | None:intergenic | 20.0% |
| !!! | ATTTTTGTGTCAAAAAAACA+AGG | + | tig0019645:158740-158759 | None:intergenic | 20.0% |
| !! | ATGCTGAACATAAATTAAAA+AGG | + | tig0019645:158901-158920 | None:intergenic | 20.0% |
| !! | AAATAGGTAAGTAAACTATT+AGG | + | tig0019645:159158-159177 | None:intergenic | 20.0% |
| !!! | GATAATTTTAGATTGAGAAA+AGG | + | tig0019645:159439-159458 | None:intergenic | 20.0% |
| !! | TCTAAATACCTCTAATTTAA+TGG | - | tig0019645:159560-159579 | Msa1375260:intron | 20.0% |
| !! | TAATACTTCCATTAAATTAG+AGG | + | tig0019645:159571-159590 | None:intergenic | 20.0% |
| !! | TAAAACACAAACAAATTCAA+AGG | + | tig0019645:159957-159976 | None:intergenic | 20.0% |
| !!! | TTTGAATTTGTTTGTGTTTT+AGG | - | tig0019645:159956-159975 | Msa1375260:intron | 20.0% |
| !!! | TGTCATACATTACATATTTT+TGG | - | tig0019645:160276-160295 | Msa1375260:five_prime_UTR | 20.0% |
| !!! | GTCATACATTACATATTTTT+GGG | - | tig0019645:160277-160296 | Msa1375260:five_prime_UTR | 20.0% |
| !!! | TCATACATTACATATTTTTG+GGG | - | tig0019645:160278-160297 | Msa1375260:five_prime_UTR | 20.0% |
| ! | CTCTCTCTATATCTATATAT+TGG | + | tig0019645:153364-153383 | None:intergenic | 25.0% |
| !! | TTGGTTCTTGATTGAATTTA+TGG | + | tig0019645:153462-153481 | None:intergenic | 25.0% |
| ! | GAATTGAGATTAAAGAAAGA+AGG | + | tig0019645:153500-153519 | None:intergenic | 25.0% |
| ! | ATACATATGATATTCGATTC+TGG | - | tig0019645:153655-153674 | Msa1375260:CDS | 25.0% |
| !! | TTAAGTTAGCTGAGATTTTT+AGG | - | tig0019645:153803-153822 | Msa1375260:intron | 25.0% |
| ! | TTATGTGGTTATTAATTCTC+AGG | - | tig0019645:153852-153871 | Msa1375260:intron | 25.0% |
| ! | TATGTGGTTATTAATTCTCA+GGG | - | tig0019645:153853-153872 | Msa1375260:intron | 25.0% |
| ! | GGGATGATAACAAAAAAAAT+TGG | - | tig0019645:154060-154079 | Msa1375260:intron | 25.0% |
| !! | AAATTCGTGTATTTTTCATC+CGG | + | tig0019645:154087-154106 | None:intergenic | 25.0% |
| ! | AACAATAATGAATTCGACAT+TGG | + | tig0019645:154306-154325 | None:intergenic | 25.0% |
| ! | AAATTCACAATAAACAAGGT+GGG | + | tig0019645:154352-154371 | None:intergenic | 25.0% |
| ! | CTTCAAATTCACAATAAACA+AGG | + | tig0019645:154356-154375 | None:intergenic | 25.0% |
| !!! | TTATTTTTAAATTTGGGCAG+TGG | - | tig0019645:154420-154439 | Msa1375260:intron | 25.0% |
| ! | GGTATAAATTATACACTGAA+CGG | + | tig0019645:154615-154634 | None:intergenic | 25.0% |
| !!! | CAAAAGGCTTTGTTTTTATT+CGG | + | tig0019645:154636-154655 | None:intergenic | 25.0% |
| !! | ATTGAATTTTTGTGTGCTTT+TGG | - | tig0019645:154903-154922 | Msa1375260:intron | 25.0% |
| ! | AATCATTAATCAACAACAAC+AGG | + | tig0019645:155236-155255 | None:intergenic | 25.0% |
| !! | TTAACTTCCTTTTATTAGGA+CGG | + | tig0019645:155338-155357 | None:intergenic | 25.0% |
| ! | TTAAGTAAGAAATCTGTACT+GGG | - | tig0019645:155354-155373 | Msa1375260:intron | 25.0% |
| ! | ATAAACTCAACTCCATAAAT+TGG | + | tig0019645:155458-155477 | None:intergenic | 25.0% |
| ! | TGGTATAAAATTGAATGCAA+CGG | + | tig0019645:155616-155635 | None:intergenic | 25.0% |
| !!! | TTGTAAAGTGAGTTTGATTT+TGG | - | tig0019645:155652-155671 | Msa1375260:intron | 25.0% |
| ! | TTCTCATATTCTGTAACTAT+GGG | + | tig0019645:155840-155859 | None:intergenic | 25.0% |
| ! | TGTGATTAACAATAGAAAAG+GGG | + | tig0019645:156092-156111 | None:intergenic | 25.0% |
| ! | TTTCTCTTTGATGAACTTAA+TGG | - | tig0019645:156141-156160 | Msa1375260:intron | 25.0% |
| ! | TTCTCTTTGATGAACTTAAT+GGG | - | tig0019645:156142-156161 | Msa1375260:intron | 25.0% |
| !! | TTGTTTAATTGTGATTTGGA+TGG | - | tig0019645:156337-156356 | Msa1375260:CDS | 25.0% |
| !!! | TTCTTTTTTGTCACCATATT+TGG | - | tig0019645:156565-156584 | Msa1375260:CDS | 25.0% |
| !! | TTCTTTTAACAGATTTGGAT+CGG | - | tig0019645:158051-158070 | Msa1375260:intron | 25.0% |
| ! | ATAAAGTAAATTAACTGACC+TGG | + | tig0019645:158123-158142 | None:intergenic | 25.0% |
| ! | ATACATGTTAACTTAACAGT+AGG | - | tig0019645:158601-158620 | Msa1375260:intron | 25.0% |
| ! | TACATGTTAACTTAACAGTA+GGG | - | tig0019645:158602-158621 | Msa1375260:intron | 25.0% |
| ! | ACTGTATTGTTTAACATTGT+AGG | - | tig0019645:158811-158830 | Msa1375260:intron | 25.0% |
| ! | AATATGATTATGAGGATTGA+GGG | + | tig0019645:158927-158946 | None:intergenic | 25.0% |
| ! | AAATATGATTATGAGGATTG+AGG | + | tig0019645:158928-158947 | None:intergenic | 25.0% |
| ! | TTGTTTGTGTAATACAAACA+AGG | + | tig0019645:159095-159114 | None:intergenic | 25.0% |
| ! | GTTTGTATTACACAAACAAA+AGG | - | tig0019645:159096-159115 | Msa1375260:intron | 25.0% |
| !!! | CAAAAAATTACTTTTCTTGG+TGG | - | tig0019645:159252-159271 | Msa1375260:intron | 25.0% |
| ! | ATCATCAATATATACAGTCT+TGG | - | tig0019645:159397-159416 | Msa1375260:intron | 25.0% |
| !! | GTTTTGCTTACAATCAAATT+TGG | - | tig0019645:159724-159743 | Msa1375260:intron | 25.0% |
| ! | ATAATTATTGGTCAACAAGT+AGG | - | tig0019645:159780-159799 | Msa1375260:intron | 25.0% |
| ! | TTAATGTTTAGTTGTTGTGT+TGG | - | tig0019645:159819-159838 | Msa1375260:intron | 25.0% |
| !!! | TAATTTTATTTTCCTGTGGA+TGG | - | tig0019645:160324-160343 | Msa1375260:five_prime_UTR | 25.0% |
| ! | AAGTTACATGTGAAAATGTA+AGG | - | tig0019645:160463-160482 | Msa1375260:five_prime_UTR | 25.0% |
| TGTACTTTGAATCAAAGACA+TGG | + | tig0019645:153185-153204 | None:intergenic | 30.0% | |
| !! | TTTTGATAAAGATGATGACG+TGG | + | tig0019645:153249-153268 | None:intergenic | 30.0% |
| !!! | TTTTCAAAAGTTTTTGGGTG+AGG | + | tig0019645:153273-153292 | None:intergenic | 30.0% |
| AACTAGAAGAATCGAATTTG+GGG | + | tig0019645:153308-153327 | None:intergenic | 30.0% | |
| GAACTAGAAGAATCGAATTT+GGG | + | tig0019645:153309-153328 | None:intergenic | 30.0% | |
| AGAACTAGAAGAATCGAATT+TGG | + | tig0019645:153310-153329 | None:intergenic | 30.0% | |
| ! | TCTATATATTGGTGTTTAGG+AGG | + | tig0019645:153353-153372 | None:intergenic | 30.0% |
| ATATAGAGAGAGAAAGAAAG+AGG | - | tig0019645:153372-153391 | Msa1375260:three_prime_UTR | 30.0% | |
| TGTTTCGTTAACAACACAAA+CGG | - | tig0019645:153430-153449 | Msa1375260:exon | 30.0% | |
| AAGGATCAAATCTGAGAAAT+TGG | + | tig0019645:153481-153500 | None:intergenic | 30.0% | |
| TCTTTAATCTCAATTCTCCA+TGG | - | tig0019645:153504-153523 | Msa1375260:CDS | 30.0% | |
| AGATATGGAAAATTCATACC+TGG | + | tig0019645:153602-153621 | None:intergenic | 30.0% | |
| !! | TTCACTGTATTGATTCAACT+AGG | - | tig0019645:153953-153972 | Msa1375260:intron | 30.0% |
| !! | TCACTGTATTGATTCAACTA+GGG | - | tig0019645:153954-153973 | Msa1375260:intron | 30.0% |
| ! | AGTTATTTGAACTTAGCTTG+AGG | - | tig0019645:153984-154003 | Msa1375260:intron | 30.0% |
| ! | GTTATTTGAACTTAGCTTGA+GGG | - | tig0019645:153985-154004 | Msa1375260:intron | 30.0% |
| GATAACAAAAAAAATTGGCC+CGG | - | tig0019645:154065-154084 | Msa1375260:intron | 30.0% | |
| ! | AATTCGTGTATTTTTCATCC+GGG | + | tig0019645:154086-154105 | None:intergenic | 30.0% |
| ATGTTGTTGAATGATTGTTG+AGG | - | tig0019645:154156-154175 | Msa1375260:intron | 30.0% | |
| ATTAAACTCGTTGACAACTT+AGG | - | tig0019645:154179-154198 | Msa1375260:intron | 30.0% | |
| TTAAACTCGTTGACAACTTA+GGG | - | tig0019645:154180-154199 | Msa1375260:intron | 30.0% | |
| ! | ATGTATGGTGGGAATAAATA+TGG | + | tig0019645:154258-154277 | None:intergenic | 30.0% |
| GAATTCATTATTGTTAGCTG+TGG | - | tig0019645:154311-154330 | Msa1375260:CDS | 30.0% | |
| CAAATTCACAATAAACAAGG+TGG | + | tig0019645:154353-154372 | None:intergenic | 30.0% | |
| GAATCTTCTGAATCAAAATC+TGG | - | tig0019645:154519-154538 | Msa1375260:intron | 30.0% | |
| ! | TGAATTTGTTTCCTTTCTCT+AGG | - | tig0019645:154663-154682 | Msa1375260:intron | 30.0% |
| ! | TAATTGACTTTCCTAGAGAA+AGG | + | tig0019645:154677-154696 | None:intergenic | 30.0% |
| AAAGAGTCTGTGATTCAAAT+TGG | + | tig0019645:154880-154899 | None:intergenic | 30.0% | |
| AATCAATGATCTTAACTGTG+TGG | + | tig0019645:154944-154963 | None:intergenic | 30.0% | |
| ! | AAGATCATTGATTGTGAAAC+TGG | - | tig0019645:154951-154970 | Msa1375260:intron | 30.0% |
| !! | AATTGCTTGAAGGTATTAGT+TGG | - | tig0019645:154975-154994 | Msa1375260:intron | 30.0% |
| CCAGACAAAAAGAAATGAAA+AGG | + | tig0019645:155059-155078 | None:intergenic | 30.0% | |
| ! | CCTTTTCATTTCTTTTTGTC+TGG | - | tig0019645:155056-155075 | Msa1375260:intron | 30.0% |
| ! | TAACTTCCTTTTATTAGGAC+GGG | + | tig0019645:155337-155356 | None:intergenic | 30.0% |
| GTTAAGTAAGAAATCTGTAC+TGG | - | tig0019645:155353-155372 | Msa1375260:intron | 30.0% | |
| !! | TTATACCATGTTATTTCCCA+TGG | - | tig0019645:155628-155647 | Msa1375260:intron | 30.0% |
| GTTCTCATATTCTGTAACTA+TGG | + | tig0019645:155841-155860 | None:intergenic | 30.0% | |
| !! | GCTATTACTGAATTTGTTGT+TGG | - | tig0019645:156118-156137 | Msa1375260:intron | 30.0% |
| !! | ACTGACTTGGATTAATTAAC+TGG | - | tig0019645:156507-156526 | Msa1375260:CDS | 30.0% |
| TTTGATTAGGCAAAGTAGTA+TGG | + | tig0019645:156869-156888 | None:intergenic | 30.0% | |
| TTGCCTAATCAAATGAGAAT+TGG | - | tig0019645:156876-156895 | Msa1375260:CDS | 30.0% | |
| ATGCCAATTCTCATTTGATT+AGG | + | tig0019645:156882-156901 | None:intergenic | 30.0% | |
| AAAATCAGTTACAGGTAAAC+GGG | + | tig0019645:157264-157283 | None:intergenic | 30.0% | |
| CAAAATCAGTTACAGGTAAA+CGG | + | tig0019645:157265-157284 | None:intergenic | 30.0% | |
| GGATTCGATTTATAATGGTT+TGG | + | tig0019645:157334-157353 | None:intergenic | 30.0% | |
| CATTATAAATCGAATCCAGT+CGG | - | tig0019645:157337-157356 | Msa1375260:intron | 30.0% | |
| !!! | ACTTTTAAGTTAACAGTGCA+AGG | + | tig0019645:157404-157423 | None:intergenic | 30.0% |
| GCACTGTTAACTTAAAAGTA+TGG | - | tig0019645:157405-157424 | Msa1375260:intron | 30.0% | |
| AACATAGACTGATTACTTGA+TGG | - | tig0019645:157628-157647 | Msa1375260:intron | 30.0% | |
| TACTAGCAACAATTGTTGAA+AGG | + | tig0019645:157968-157987 | None:intergenic | 30.0% | |
| TTGCATAATTTACATCAACC+AGG | + | tig0019645:158148-158167 | None:intergenic | 30.0% | |
| ! | TGAAAGCAGGTAATTTTCAA+GGG | + | tig0019645:158232-158251 | None:intergenic | 30.0% |
| ! | ATGAAAGCAGGTAATTTTCA+AGG | + | tig0019645:158233-158252 | None:intergenic | 30.0% |
| !!! | AATCCAAATTGGTTTTAGCA+GGG | + | tig0019645:158330-158349 | None:intergenic | 30.0% |
| !!! | TAATCCAAATTGGTTTTAGC+AGG | + | tig0019645:158331-158350 | None:intergenic | 30.0% |
| GAGCTCAAAAATTGATTACT+AGG | + | tig0019645:158516-158535 | None:intergenic | 30.0% | |
| TTTCTCGTGCTCATAAAAAA+AGG | + | tig0019645:158676-158695 | None:intergenic | 30.0% | |
| !!! | TTTTTTATGAGCACGAGAAA+TGG | - | tig0019645:158676-158695 | Msa1375260:intron | 30.0% |
| GTAATACAAACAAGGACAAA+AGG | + | tig0019645:159087-159106 | None:intergenic | 30.0% | |
| CAAACAAAAGGTAAATCCAT+TGG | - | tig0019645:159108-159127 | Msa1375260:intron | 30.0% | |
| GATAACAATTATAGTGCCAA+TGG | + | tig0019645:159127-159146 | None:intergenic | 30.0% | |
| TGCAACTTCAAGACAAAAAT+AGG | + | tig0019645:159174-159193 | None:intergenic | 30.0% | |
| ! | ATTTTTGTCTTGAAGTTGCA+TGG | - | tig0019645:159174-159193 | Msa1375260:CDS | 30.0% |
| ! | TTTTTGTCTTGAAGTTGCAT+GGG | - | tig0019645:159175-159194 | Msa1375260:CDS | 30.0% |
| ATCAATATATACAGTCTTGG+AGG | - | tig0019645:159400-159419 | Msa1375260:intron | 30.0% | |
| ! | TTCTTTTATTCGAGACATGA+GGG | + | tig0019645:159508-159527 | None:intergenic | 30.0% |
| ! | TTTCTTTTATTCGAGACATG+AGG | + | tig0019645:159509-159528 | None:intergenic | 30.0% |
| ! | CATTCTAAAAATGTCGTTCA+TGG | + | tig0019645:159629-159648 | None:intergenic | 30.0% |
| AATACATGAATGAGATGACT+GGG | + | tig0019645:159895-159914 | None:intergenic | 30.0% | |
| AAATACATGAATGAGATGAC+TGG | + | tig0019645:159896-159915 | None:intergenic | 30.0% | |
| ! | GGTATATAGAGTATCAGATA+TGG | - | tig0019645:159977-159996 | Msa1375260:intron | 30.0% |
| AATAATTAACCAAGAGCAGA+AGG | + | tig0019645:160370-160389 | None:intergenic | 30.0% | |
| CAAGAAAGGTTTCTATATCA+TGG | - | tig0019645:160402-160421 | Msa1375260:five_prime_UTR | 30.0% | |
| TATATCATGTGTCCTGAAAA+TGG | + | tig0019645:160428-160447 | None:intergenic | 30.0% | |
| CAAGTATGTTGTACATTATG+CGG | - | tig0019645:160519-160538 | Msa1375260:five_prime_UTR | 30.0% | |
| ATCAAAGACATGGATGATGT+TGG | + | tig0019645:153175-153194 | None:intergenic | 35.0% | |
| ! | TTGGTGTTTAGGAGGAATAA+CGG | + | tig0019645:153345-153364 | None:intergenic | 35.0% |
| ACAAAGTTTCTCTCTCTCTA+AGG | + | tig0019645:153399-153418 | None:intergenic | 35.0% | |
| ! | ATTCTCCATGGAATTTTCCA+TGG | - | tig0019645:153516-153535 | Msa1375260:CDS | 35.0% |
| TGATTCCATGGAAAATTCCA+TGG | + | tig0019645:153524-153543 | None:intergenic | 35.0% | |
| TGGTTATTAATTCTCAGGGT+TGG | - | tig0019645:153857-153876 | Msa1375260:intron | 35.0% | |
| GTCACACTATCAAGCATTTA+TGG | + | tig0019645:154115-154134 | None:intergenic | 35.0% | |
| ATGCTAAGCATATGTATGGT+GGG | + | tig0019645:154269-154288 | None:intergenic | 35.0% | |
| AAGCATGCTAAGCATATGTA+TGG | + | tig0019645:154273-154292 | None:intergenic | 35.0% | |
| ! | TTTCGTACATGCTTGTTTCT+AGG | + | tig0019645:154486-154505 | None:intergenic | 35.0% |
| ACAAATTCACAGTCGACAAA+AGG | + | tig0019645:154652-154671 | None:intergenic | 35.0% | |
| TGAAACTGGAAATTGCTTGA+AGG | - | tig0019645:154965-154984 | Msa1375260:intron | 35.0% | |
| CAAATCTTAGATCCGATTCA+AGG | + | tig0019645:155179-155198 | None:intergenic | 35.0% | |
| ! | TCATAGTGTAGCTCTACTAT+AGG | + | tig0019645:155306-155325 | None:intergenic | 35.0% |
| TACATACCCGTCCTAATAAA+AGG | - | tig0019645:155328-155347 | Msa1375260:intron | 35.0% | |
| ! | ACTAACCAGCTACTCAATTT+TGG | - | tig0019645:155501-155520 | Msa1375260:intron | 35.0% |
| AACAACCAAAATTGAGTAGC+TGG | + | tig0019645:155509-155528 | None:intergenic | 35.0% | |
| AAACTCACTTTACAAGCCAT+GGG | + | tig0019645:155647-155666 | None:intergenic | 35.0% | |
| CATGAGTACTTCTATGAAAG+AGG | - | tig0019645:155754-155773 | Msa1375260:CDS | 35.0% | |
| ACTTGGCATTAGAGATTACA+GGG | + | tig0019645:155808-155827 | None:intergenic | 35.0% | |
| ATAATGTGTTAATCGGCTAC+AGG | - | tig0019645:155939-155958 | Msa1375260:intron | 35.0% | |
| AACAATAGAAAAGGGGAGAT+GGG | + | tig0019645:156085-156104 | None:intergenic | 35.0% | |
| TAACAATAGAAAAGGGGAGA+TGG | + | tig0019645:156086-156105 | None:intergenic | 35.0% | |
| AACAGCAATTATTTCCCCAT+TGG | + | tig0019645:156210-156229 | None:intergenic | 35.0% | |
| ! | GAAATAATTGCTGTTGCATC+AGG | - | tig0019645:156215-156234 | Msa1375260:CDS | 35.0% |
| TCACCAAAGGTTATAACACA+TGG | + | tig0019645:156284-156303 | None:intergenic | 35.0% | |
| CTTGTCTTCAACACAAATAC+TGG | + | tig0019645:156418-156437 | None:intergenic | 35.0% | |
| CAGTATTTGTGTTGAAGACA+AGG | - | tig0019645:156416-156435 | Msa1375260:CDS | 35.0% | |
| !! | ACCATATCTTTTAACTGCTC+AGG | - | tig0019645:156477-156496 | Msa1375260:CDS | 35.0% |
| ACCTGAGCAGTTAAAAGATA+TGG | + | tig0019645:156481-156500 | None:intergenic | 35.0% | |
| ! | TCATTTAGAATATCCTCCAC+CGG | - | tig0019645:156653-156672 | Msa1375260:CDS | 35.0% |
| ACATTTGTGACAAAAACAGC+CGG | + | tig0019645:156675-156694 | None:intergenic | 35.0% | |
| ! | ATACCTGCAGTTTTACAATC+AGG | - | tig0019645:157215-157234 | Msa1375260:CDS | 35.0% |
| AAACCTGATTGTAAAACTGC+AGG | + | tig0019645:157221-157240 | None:intergenic | 35.0% | |
| !! | CGTTTACCTGTAACTGATTT+TGG | - | tig0019645:157263-157282 | Msa1375260:CDS | 35.0% |
| AGATTGCCAAAATCAGTTAC+AGG | + | tig0019645:157272-157291 | None:intergenic | 35.0% | |
| TCATGCGGCAAATTAATAGA+AGG | + | tig0019645:157299-157318 | None:intergenic | 35.0% | |
| !! | TCTATTAATTTGCCGCATGA+TGG | - | tig0019645:157299-157318 | Msa1375260:CDS | 35.0% |
| !! | CTATTAATTTGCCGCATGAT+GGG | - | tig0019645:157300-157319 | Msa1375260:CDS | 35.0% |
| CGACTGGATTCGATTTATAA+TGG | + | tig0019645:157339-157358 | None:intergenic | 35.0% | |
| GATAGGTTCATAACTTCAGA+AGG | + | tig0019645:157508-157527 | None:intergenic | 35.0% | |
| ACACTATATCAATCACATGC+TGG | + | tig0019645:157540-157559 | None:intergenic | 35.0% | |
| ! | AAATGTTTGGAGTGACTTTG+TGG | - | tig0019645:157681-157700 | Msa1375260:CDS | 35.0% |
| AACTGTGTTTGCAGTGAAAT+GGG | - | tig0019645:157739-157758 | Msa1375260:intron | 35.0% | |
| TCTACCACATGGTGAAAAAT+GGG | + | tig0019645:157767-157786 | None:intergenic | 35.0% | |
| ATCTACCACATGGTGAAAAA+TGG | + | tig0019645:157768-157787 | None:intergenic | 35.0% | |
| TGTACAAGAGTTTGTAATCC+TGG | + | tig0019645:157838-157857 | None:intergenic | 35.0% | |
| ATTACAAACTCTTGTACACC+AGG | - | tig0019645:157840-157859 | Msa1375260:intron | 35.0% | |
| ATTACTTGATGTGCTGAGAT+TGG | + | tig0019645:157898-157917 | None:intergenic | 35.0% | |
| ATCAAGTAATGTATGAGCTC+CGG | - | tig0019645:157908-157927 | Msa1375260:intron | 35.0% | |
| TGAGGACTAAAAATGAAAGC+AGG | + | tig0019645:158245-158264 | None:intergenic | 35.0% | |
| ! | TTTTAGCAGGGACTAAAACT+GGG | + | tig0019645:158318-158337 | None:intergenic | 35.0% |
| ! | TGCGTGCAGGAAAATTTTAT+AGG | - | tig0019645:158633-158652 | Msa1375260:intron | 35.0% |
| ! | GCGTGCAGGAAAATTTTATA+GGG | - | tig0019645:158634-158653 | Msa1375260:intron | 35.0% |
| !!! | ATGGAAGTTGGTGATTTTGT+AGG | - | tig0019645:158695-158714 | Msa1375260:CDS | 35.0% |
| !!! | TGGAAGTTGGTGATTTTGTA+GGG | - | tig0019645:158696-158715 | Msa1375260:CDS | 35.0% |
| !! | CTGAAAAGCATTGTCATTGA+TGG | - | tig0019645:159365-159384 | Msa1375260:intron | 35.0% |
| TACAGTCTTGGAGGTAAAAA+TGG | - | tig0019645:159409-159428 | Msa1375260:intron | 35.0% | |
| CAACAAGTAGGCACTATTTA+TGG | - | tig0019645:159792-159811 | Msa1375260:intron | 35.0% | |
| TATCAGATATGGAACTTGTC+AGG | - | tig0019645:159988-160007 | Msa1375260:intron | 35.0% | |
| ATCAGATATGGAACTTGTCA+GGG | - | tig0019645:159989-160008 | Msa1375260:intron | 35.0% | |
| ! | TTGCATTCAAAAGCATACCT+TGG | + | tig0019645:160090-160109 | None:intergenic | 35.0% |
| TGCCATTCACATTACAAGTA+CGG | + | tig0019645:160200-160219 | None:intergenic | 35.0% | |
| AAAAATTCACTTCCATCCAC+AGG | + | tig0019645:160339-160358 | None:intergenic | 35.0% | |
| TTGAACAGTCAAAGCAAGAA+AGG | - | tig0019645:160388-160407 | Msa1375260:five_prime_UTR | 35.0% | |
| !! | TCTATATCATGGCCATTTTC+AGG | - | tig0019645:160413-160432 | Msa1375260:five_prime_UTR | 35.0% |
| TAGAAGAATCGAATTTGGGG+TGG | + | tig0019645:153305-153324 | None:intergenic | 40.0% | |
| ! | GGAATTTTCCATGGAATCAG+CGG | - | tig0019645:153525-153544 | Msa1375260:intron | 40.0% |
| ! | ATACCTGGTGTTGGAATTCT+GGG | + | tig0019645:153587-153606 | None:intergenic | 40.0% |
| GGAAAATTCATACCTGGTGT+TGG | + | tig0019645:153596-153615 | None:intergenic | 40.0% | |
| ! | TTGAACTTAGCTTGAGGGTT+AGG | - | tig0019645:153990-154009 | Msa1375260:intron | 40.0% |
| CATGCTAAGCATATGTATGG+TGG | + | tig0019645:154270-154289 | None:intergenic | 40.0% | |
| TTCACAATAAACAAGGTGGG+TGG | + | tig0019645:154349-154368 | None:intergenic | 40.0% | |
| AGTTGTGTAAGTACCATGAG+AGG | + | tig0019645:154587-154606 | None:intergenic | 40.0% | |
| ! | CTCTAGGAAAGTCAATTACG+AGG | - | tig0019645:154679-154698 | Msa1375260:intron | 40.0% |
| ! | AAATTTGATTTCCAGGGTCG+AGG | - | tig0019645:154714-154733 | Msa1375260:intron | 40.0% |
| AGGCAATAAAGGGCAATACT+TGG | + | tig0019645:154764-154783 | None:intergenic | 40.0% | |
| AATTGCAACTTACTGTGTGG+AGG | + | tig0019645:154839-154858 | None:intergenic | 40.0% | |
| TCCACACAGTAAGTTGCAAT+TGG | - | tig0019645:154838-154857 | Msa1375260:intron | 40.0% | |
| TCCAATTGCAACTTACTGTG+TGG | + | tig0019645:154842-154861 | None:intergenic | 40.0% | |
| ! | TTCAAGGAGACATGGGTTAT+GGG | + | tig0019645:155163-155182 | None:intergenic | 40.0% |
| ! | ATTCAAGGAGACATGGGTTA+TGG | + | tig0019645:155164-155183 | None:intergenic | 40.0% |
| TAACCCATGTCTCCTTGAAT+CGG | - | tig0019645:155164-155183 | Msa1375260:intron | 40.0% | |
| ACAAGCCATGGGAAATAACA+TGG | + | tig0019645:155636-155655 | None:intergenic | 40.0% | |
| CAAACTCACTTTACAAGCCA+TGG | + | tig0019645:155648-155667 | None:intergenic | 40.0% | |
| CACTTGGCATTAGAGATTAC+AGG | + | tig0019645:155809-155828 | None:intergenic | 40.0% | |
| CTGTAATCTCTAATGCCAAG+TGG | - | tig0019645:155807-155826 | Msa1375260:CDS | 40.0% | |
| CAGAATATGAGAACCGTTCT+AGG | - | tig0019645:155847-155866 | Msa1375260:CDS | 40.0% | |
| ATCAGGACATATGCCTAGAA+CGG | + | tig0019645:155863-155882 | None:intergenic | 40.0% | |
| TTCTAGGCATATGTCCTGAT+GGG | - | tig0019645:155863-155882 | Msa1375260:CDS | 40.0% | |
| ACAAACACTAAGACTGTGCT+AGG | + | tig0019645:155899-155918 | None:intergenic | 40.0% | |
| ! | AACGACAGATACTTGCTAGT+GGG | - | tig0019645:155980-155999 | Msa1375260:intron | 40.0% |
| TGGACCAAGAAGTTCGTTTA+TGG | - | tig0019645:156007-156026 | Msa1375260:intron | 40.0% | |
| GGACCAAGAAGTTCGTTTAT+GGG | - | tig0019645:156008-156027 | Msa1375260:intron | 40.0% | |
| CATCCCATAAACGAACTTCT+TGG | + | tig0019645:156014-156033 | None:intergenic | 40.0% | |
| CAATTATTTCCCCATTGGCA+TGG | + | tig0019645:156205-156224 | None:intergenic | 40.0% | |
| TATAACACATGGCAGGTTCT+CGG | + | tig0019645:156273-156292 | None:intergenic | 40.0% | |
| CAAAGGTTATAACACATGGC+AGG | + | tig0019645:156280-156299 | None:intergenic | 40.0% | |
| CTGCCATGTGTTATAACCTT+TGG | - | tig0019645:156278-156297 | Msa1375260:CDS | 40.0% | |
| AAGGTAGAACATGTCACCAA+AGG | + | tig0019645:156297-156316 | None:intergenic | 40.0% | |
| TGTGGCACTACAAAAATGCA+AGG | - | tig0019645:156380-156399 | Msa1375260:CDS | 40.0% | |
| GTGGCACTACAAAAATGCAA+GGG | - | tig0019645:156381-156400 | Msa1375260:CDS | 40.0% | |
| CCTGCACATCAATCCAAATA+TGG | + | tig0019645:156581-156600 | None:intergenic | 40.0% | |
| CCATATTTGGATTGATGTGC+AGG | - | tig0019645:156578-156597 | Msa1375260:CDS | 40.0% | |
| TTCAGATTGCTCAATGACAG+AGG | - | tig0019645:156617-156636 | Msa1375260:CDS | 40.0% | |
| TTGTCACAAATGTTCATCCC+AGG | - | tig0019645:156682-156701 | Msa1375260:CDS | 40.0% | |
| AATTCAACTCTTGACACTGG+TGG | + | tig0019645:156732-156751 | None:intergenic | 40.0% | |
| TGCAATTCAACTCTTGACAC+TGG | + | tig0019645:156735-156754 | None:intergenic | 40.0% | |
| ! | AGCATGCAGGTTGAACAATA+CGG | - | tig0019645:156783-156802 | Msa1375260:CDS | 40.0% |
| CAAACCGGAGCAGAATATAA+TGG | - | tig0019645:156843-156862 | Msa1375260:CDS | 40.0% | |
| ATGGCCATTATATTCTGCTC+CGG | + | tig0019645:156850-156869 | None:intergenic | 40.0% | |
| TGGCATCAATAACCTCACAA+TGG | - | tig0019645:156896-156915 | Msa1375260:CDS | 40.0% | |
| GGCATCAATAACCTCACAAT+GGG | - | tig0019645:156897-156916 | Msa1375260:CDS | 40.0% | |
| ATCAATAACCTCACAATGGG+TGG | - | tig0019645:156900-156919 | Msa1375260:CDS | 40.0% | |
| !!! | GTTTTCATGTTGGCTTGCTT+CGG | + | tig0019645:156952-156971 | None:intergenic | 40.0% |
| ! | CATGATCAGCGTTTTCATGT+TGG | + | tig0019645:156962-156981 | None:intergenic | 40.0% |
| CATCCATTAGAATCTGGTGA+CGG | + | tig0019645:157035-157054 | None:intergenic | 40.0% | |
| ! | GTCACCAGATTCTAATGGAT+GGG | - | tig0019645:157034-157053 | Msa1375260:CDS | 40.0% |
| ACTAACCATCCTTGCAGAAA+AGG | + | tig0019645:157065-157084 | None:intergenic | 40.0% | |
| TTTCTGCAAGGATGGTTAGT+CGG | - | tig0019645:157065-157084 | Msa1375260:CDS | 40.0% | |
| !! | ATCTGTTGAGGAAGCATTGA+GGG | + | tig0019645:157110-157129 | None:intergenic | 40.0% |
| !! | AATCTGTTGAGGAAGCATTG+AGG | + | tig0019645:157111-157130 | None:intergenic | 40.0% |
| TCAATGCTTCCTCAACAGAT+TGG | - | tig0019645:157110-157129 | Msa1375260:intron | 40.0% | |
| GTGAAAGAACCAATCTGTTG+AGG | + | tig0019645:157122-157141 | None:intergenic | 40.0% | |
| !! | TTGGTGGTGAACAGATTAGA+TGG | + | tig0019645:157149-157168 | None:intergenic | 40.0% |
| TTAGACGGCATCTTTGTAGT+GGG | + | tig0019645:157457-157476 | None:intergenic | 40.0% | |
| CGACATGTGGTATAGTTAGA+CGG | + | tig0019645:157472-157491 | None:intergenic | 40.0% | |
| CAACTGTGTTTGCAGTGAAA+TGG | - | tig0019645:157738-157757 | Msa1375260:intron | 40.0% | |
| !! | AGCAGGTAATTTTCAAGGGA+CGG | + | tig0019645:158228-158247 | None:intergenic | 40.0% |
| !! | GTTTTAGCAGGGACTAAAAC+TGG | + | tig0019645:158319-158338 | None:intergenic | 40.0% |
| AGTCCCTGCTAAAACCAATT+TGG | - | tig0019645:158324-158343 | Msa1375260:intron | 40.0% | |
| CTCGTGCTCATAAAAAAAGG+TGG | + | tig0019645:158673-158692 | None:intergenic | 40.0% | |
| AGCAGAATATGCTCAGATGT+AGG | + | tig0019645:159317-159336 | None:intergenic | 40.0% | |
| ! | TGTTTAGTTGTTGTGTTGGC+TGG | - | tig0019645:159823-159842 | Msa1375260:intron | 40.0% |
| ! | CATGCTTTCATCCTTTTCCT+GGG | - | tig0019645:160045-160064 | Msa1375260:intron | 40.0% |
| ! | ATGCTTTCATCCTTTTCCTG+GGG | - | tig0019645:160046-160065 | Msa1375260:intron | 40.0% |
| GTTGTAGGAAGGAAAGCTTA+GGG | - | tig0019645:160161-160180 | Msa1375260:CDS | 40.0% | |
| CATTACAAGTACGGTCAAAC+TGG | + | tig0019645:160191-160210 | None:intergenic | 40.0% | |
| GACCGTACTTGTAATGTGAA+TGG | - | tig0019645:160195-160214 | Msa1375260:five_prime_UTR | 40.0% | |
| ACTTGTAATGTGAATGGCAC+TGG | - | tig0019645:160201-160220 | Msa1375260:five_prime_UTR | 40.0% | |
| TAACCAAGAGCAGAAGGAAA+GGG | + | tig0019645:160364-160383 | None:intergenic | 40.0% | |
| TTAACCAAGAGCAGAAGGAA+AGG | + | tig0019645:160365-160384 | None:intergenic | 40.0% | |
| !! | ATGAAGTTCCGCTGATTCCA+TGG | + | tig0019645:153536-153555 | None:intergenic | 45.0% |
| ! | TTGGAATTCTGGGAGGATGA+GGG | + | tig0019645:153577-153596 | None:intergenic | 45.0% |
| ! | CATACCTGGTGTTGGAATTC+TGG | + | tig0019645:153588-153607 | None:intergenic | 45.0% |
| !! | CTTGATAGTGTGACAGTCAC+AGG | - | tig0019645:154121-154140 | Msa1375260:intron | 45.0% |
| !! | AGCATGTACGAAAGTGTCAC+TGG | - | tig0019645:154493-154512 | Msa1375260:intron | 45.0% |
| !! | GCATGTACGAAAGTGTCACT+GGG | - | tig0019645:154494-154513 | Msa1375260:intron | 45.0% |
| !! | CATGTACGAAAGTGTCACTG+GGG | - | tig0019645:154495-154514 | Msa1375260:intron | 45.0% |
| !! | CTGTTCTCGTTCTAGAACAG+TGG | - | tig0019645:154542-154561 | Msa1375260:intron | 45.0% |
| ACAGTGGTAGATGCAAAGTG+TGG | - | tig0019645:154558-154577 | Msa1375260:intron | 45.0% | |
| CTGCAGCATTTAGTCCAGAT+GGG | - | tig0019645:154803-154822 | Msa1375260:intron | 45.0% | |
| ! | GAGGCAAGAATTTTCCCATC+TGG | + | tig0019645:154820-154839 | None:intergenic | 45.0% |
| AGGTATTAGTTGGCCACAGA+AGG | - | tig0019645:154985-155004 | Msa1375260:intron | 45.0% | |
| !! | AACACCTCCTGAAAGTGTTG+TGG | - | tig0019645:155136-155155 | Msa1375260:intron | 45.0% |
| !! | ACACCTCCTGAAAGTGTTGT+GGG | - | tig0019645:155137-155156 | Msa1375260:intron | 45.0% |
| GATCCGATTCAAGGAGACAT+GGG | + | tig0019645:155170-155189 | None:intergenic | 45.0% | |
| AGATCCGATTCAAGGAGACA+TGG | + | tig0019645:155171-155190 | None:intergenic | 45.0% | |
| !! | CCATAAATTGGCTCGTCTTC+TGG | + | tig0019645:155446-155465 | None:intergenic | 45.0% |
| CCAGAAGACGAGCCAATTTA+TGG | - | tig0019645:155443-155462 | Msa1375260:intron | 45.0% | |
| ACTATGGGCACAAAACCACT+TGG | + | tig0019645:155825-155844 | None:intergenic | 45.0% | |
| ! | GTTCTAGGCATATGTCCTGA+TGG | - | tig0019645:155862-155881 | Msa1375260:CDS | 45.0% |
| ! | TAGGATTTGAAGCACCCATC+AGG | + | tig0019645:155880-155899 | None:intergenic | 45.0% |
| GTGTTAATCGGCTACAGGTT+AGG | - | tig0019645:155944-155963 | Msa1375260:intron | 45.0% | |
| GTATCTGTCGTTGCAATGGA+TGG | + | tig0019645:155972-155991 | None:intergenic | 45.0% | |
| GCAAGTATCTGTCGTTGCAA+TGG | + | tig0019645:155976-155995 | None:intergenic | 45.0% | |
| ! | CAACGACAGATACTTGCTAG+TGG | - | tig0019645:155979-155998 | Msa1375260:intron | 45.0% |
| ! | GATACTTGCTAGTGGGAGTT+TGG | - | tig0019645:155987-156006 | Msa1375260:intron | 45.0% |
| GGAAAGCGAGAGATGCAATA+GGG | + | tig0019645:156184-156203 | None:intergenic | 45.0% | |
| TGGAAAGCGAGAGATGCAAT+AGG | + | tig0019645:156185-156204 | None:intergenic | 45.0% | |
| TACTGTGTCAGTTGTACGTG+TGG | - | tig0019645:156362-156381 | Msa1375260:CDS | 45.0% | |
| AAAAGATATGGTGCCCCATG+CGG | + | tig0019645:156469-156488 | None:intergenic | 45.0% | |
| ATGACAGAGGCAACATCTCA+TGG | - | tig0019645:156630-156649 | Msa1375260:CDS | 45.0% | |
| TTTGTGACAAAAACAGCCGG+TGG | + | tig0019645:156672-156691 | None:intergenic | 45.0% | |
| CAGCATGCTAGTAACGATGT+TGG | - | tig0019645:156753-156772 | Msa1375260:CDS | 45.0% | |
| !! | TGTTGGTTTGAGTAGCATGC+AGG | - | tig0019645:156770-156789 | Msa1375260:CDS | 45.0% |
| ! | TTGAGAGCTAGTGGGTATCT+CGG | + | tig0019645:156826-156845 | None:intergenic | 45.0% |
| ! | ATACCCACTAGCTCTCAAAC+CGG | - | tig0019645:156828-156847 | Msa1375260:CDS | 45.0% |
| ATAACCTCACAATGGGTGGT+AGG | - | tig0019645:156904-156923 | Msa1375260:CDS | 45.0% | |
| TAACCTCACAATGGGTGGTA+GGG | - | tig0019645:156905-156924 | Msa1375260:CDS | 45.0% | |
| GTTCCGTCACCAGATTCTAA+TGG | - | tig0019645:157029-157048 | Msa1375260:CDS | 45.0% | |
| CGTCACCAGATTCTAATGGA+TGG | - | tig0019645:157033-157052 | Msa1375260:CDS | 45.0% | |
| AGCTCCCATCCATTAGAATC+TGG | + | tig0019645:157041-157060 | None:intergenic | 45.0% | |
| TTAGTCGGTCAAAGCCAAGT+TGG | - | tig0019645:157080-157099 | Msa1375260:CDS | 45.0% | |
| TCAGTTACAGGTAAACGGGA+TGG | + | tig0019645:157260-157279 | None:intergenic | 45.0% | |
| TGGCTATCAAACCCATCATG+CGG | + | tig0019645:157314-157333 | None:intergenic | 45.0% | |
| TAATTCTGTAGCAGCTGCAG+TGG | + | tig0019645:157381-157400 | None:intergenic | 45.0% | |
| TAGACGGCATCTTTGTAGTG+GGG | + | tig0019645:157456-157475 | None:intergenic | 45.0% | |
| GTTAGACGGCATCTTTGTAG+TGG | + | tig0019645:157458-157477 | None:intergenic | 45.0% | |
| CATGCTGGAGCAGATATGAT+AGG | + | tig0019645:157525-157544 | None:intergenic | 45.0% | |
| GCGGCTAAAAATCTACCACA+TGG | + | tig0019645:157778-157797 | None:intergenic | 45.0% | |
| TGCATGTATGCACCCTCATA+TGG | - | tig0019645:157804-157823 | Msa1375260:intron | 45.0% | |
| CTGGATCAGCTTCCATATGA+GGG | + | tig0019645:157819-157838 | None:intergenic | 45.0% | |
| CTTCCTCCAGGGAATATATC+CGG | + | tig0019645:157930-157949 | None:intergenic | 45.0% | |
| ! | TGGACTAGAGTACATCTGAG+AGG | + | tig0019645:158001-158020 | None:intergenic | 45.0% |
| ! | AGGCAATGAGCAGCTCTAAT+TGG | + | tig0019645:158091-158110 | None:intergenic | 45.0% |
| TCATTGCCTGACTTCAATCC+AGG | - | tig0019645:158102-158121 | Msa1375260:intron | 45.0% | |
| AACTGACCTGGATTGAAGTC+AGG | + | tig0019645:158111-158130 | None:intergenic | 45.0% | |
| ! | TAGGGAATAAAAGTGCGTGC+AGG | - | tig0019645:158620-158639 | Msa1375260:intron | 45.0% |
| TGAGCACGAGAAATGGAAGT+TGG | - | tig0019645:158683-158702 | Msa1375260:intron | 45.0% | |
| ! | GCATGCTTTCATCCTTTTCC+TGG | - | tig0019645:160044-160063 | Msa1375260:intron | 45.0% |
| ! | TGCTTTCATCCTTTTCCTGG+GGG | - | tig0019645:160047-160066 | Msa1375260:intron | 45.0% |
| ! | GATTGATAACCCTTTGCTCG+TGG | - | tig0019645:160136-160155 | Msa1375260:CDS | 45.0% |
| GGTTGTAGGAAGGAAAGCTT+AGG | - | tig0019645:160160-160179 | Msa1375260:CDS | 45.0% | |
| ! | AATGTGAATGGCACTGGATC+TGG | - | tig0019645:160207-160226 | Msa1375260:five_prime_UTR | 45.0% |
| TTCCCTGAGGAGAACATGAT+TGG | - | tig0019645:160234-160253 | Msa1375260:five_prime_UTR | 45.0% | |
| CTCCAATCATGTTCTCCTCA+GGG | + | tig0019645:160239-160258 | None:intergenic | 45.0% | |
| ACTCCAATCATGTTCTCCTC+AGG | + | tig0019645:160240-160259 | None:intergenic | 45.0% | |
| TTGGAGTCGATCAATGAGCA+AGG | - | tig0019645:160253-160272 | Msa1375260:five_prime_UTR | 45.0% | |
| !! | ATAAAAAAATAAAAAAACAA+AGG | + | tig0019645:156316-156335 | None:intergenic | 5.0% |
| !! | AAAATAATTCAAAAATTTAA+AGG | + | tig0019645:158366-158385 | None:intergenic | 5.0% |
| ! | AAGATGATGACGTGGCGTCT+AGG | + | tig0019645:153241-153260 | None:intergenic | 50.0% |
| ! | GAGGGTTGATCATGACACAG+AGG | + | tig0019645:153559-153578 | None:intergenic | 50.0% |
| ! | GTTGGAATTCTGGGAGGATG+AGG | + | tig0019645:153578-153597 | None:intergenic | 50.0% |
| CAAAGTGTGGTCTCCTCTCA+TGG | - | tig0019645:154571-154590 | Msa1375260:intron | 50.0% | |
| TGCAGCAATAGTAGACCGTG+GGG | + | tig0019645:154788-154807 | None:intergenic | 50.0% | |
| CTGCAGCAATAGTAGACCGT+GGG | + | tig0019645:154789-154808 | None:intergenic | 50.0% | |
| GCTGCAGCATTTAGTCCAGA+TGG | - | tig0019645:154802-154821 | Msa1375260:intron | 50.0% | |
| ! | TGTGCTTTTGGCATGTGCAG+TGG | - | tig0019645:154915-154934 | Msa1375260:intron | 50.0% |
| AAGCCAAAGCTTACCACCCA+AGG | + | tig0019645:155014-155033 | None:intergenic | 50.0% | |
| TATGGGCCCACAACACTTTC+AGG | + | tig0019645:155146-155165 | None:intergenic | 50.0% | |
| TCTCTCGCTTTCCATGCCAA+TGG | - | tig0019645:156191-156210 | Msa1375260:intron | 50.0% | |
| CTCTCGCTTTCCATGCCAAT+GGG | - | tig0019645:156192-156211 | Msa1375260:intron | 50.0% | |
| TCTCGCTTTCCATGCCAATG+GGG | - | tig0019645:156193-156212 | Msa1375260:intron | 50.0% | |
| TGCTGTTGCATCAGGTCACA+AGG | - | tig0019645:156223-156242 | Msa1375260:CDS | 50.0% | |
| ! | CTGTGCATTTTCACCCGCAT+GGG | - | tig0019645:156452-156471 | Msa1375260:CDS | 50.0% |
| ! | TGTGCATTTTCACCCGCATG+GGG | - | tig0019645:156453-156472 | Msa1375260:CDS | 50.0% |
| AAAGATATGGTGCCCCATGC+GGG | + | tig0019645:156468-156487 | None:intergenic | 50.0% | |
| CTCAGGTGAGTGAACTGACT+TGG | - | tig0019645:156494-156513 | Msa1375260:CDS | 50.0% | |
| GACATGTTGATCTGCGTCCT+GGG | + | tig0019645:156702-156721 | None:intergenic | 50.0% | |
| TGACATGTTGATCTGCGTCC+TGG | + | tig0019645:156703-156722 | None:intergenic | 50.0% | |
| !! | TCTGGTGACGGAACAATCTG+AGG | + | tig0019645:157023-157042 | None:intergenic | 50.0% |
| ! | AGCTGCCTTTTCTGCAAGGA+TGG | - | tig0019645:157057-157076 | Msa1375260:CDS | 50.0% |
| GCATTGAGGGAACACCAACT+TGG | + | tig0019645:157097-157116 | None:intergenic | 50.0% | |
| CACAGCTAGCTCAACATTGG+TGG | + | tig0019645:157165-157184 | None:intergenic | 50.0% | |
| TGGCACAGCTAGCTCAACAT+TGG | + | tig0019645:157168-157187 | None:intergenic | 50.0% | |
| ATGCCATTGGGCATTCCTGA+AGG | + | tig0019645:157191-157210 | None:intergenic | 50.0% | |
| GCAGGTATGCTGATGCCATT+GGG | + | tig0019645:157203-157222 | None:intergenic | 50.0% | |
| TGCAGGTATGCTGATGCCAT+TGG | + | tig0019645:157204-157223 | None:intergenic | 50.0% | |
| !! | CTGATTTGGCAAGTTCCGAC+TGG | + | tig0019645:157355-157374 | None:intergenic | 50.0% |
| GTCGGAACTTGCCAAATCAG+TGG | - | tig0019645:157355-157374 | Msa1375260:intron | 50.0% | |
| !! | ACTTCAGAAGGTACCTGCAG+AGG | + | tig0019645:157496-157515 | None:intergenic | 50.0% |
| !! | GGTGCCCATTTTTCACCATG+TGG | - | tig0019645:157760-157779 | Msa1375260:intron | 50.0% |
| GTGCATACATGCAACACAGG+CGG | + | tig0019645:157797-157816 | None:intergenic | 50.0% | |
| AGGGTGCATACATGCAACAC+AGG | + | tig0019645:157800-157819 | None:intergenic | 50.0% | |
| CCTGGATCAGCTTCCATATG+AGG | + | tig0019645:157820-157839 | None:intergenic | 50.0% | |
| CCTCATATGGAAGCTGATCC+AGG | - | tig0019645:157817-157836 | Msa1375260:intron | 50.0% | |
| !! | GTTGGTGATGTTGGAAGTCC+AGG | + | tig0019645:157868-157887 | None:intergenic | 50.0% |
| !! | GGATGTCGAGTTGGTGATGT+TGG | + | tig0019645:157877-157896 | None:intergenic | 50.0% |
| GCTGAGATTGGATGTCGAGT+TGG | + | tig0019645:157886-157905 | None:intergenic | 50.0% | |
| TGAGCTCCGGATATATTCCC+TGG | - | tig0019645:157921-157940 | Msa1375260:intron | 50.0% | |
| GGGCGCAGGAAAATACTGTA+AGG | + | tig0019645:158298-158317 | None:intergenic | 50.0% | |
| GAGCATATTCTGCTCGCCTA+TGG | - | tig0019645:159323-159342 | Msa1375260:intron | 50.0% | |
| AGAGCTATGACGTCGACCAT+AGG | + | tig0019645:159342-159361 | None:intergenic | 50.0% | |
| ! | GCTTTCTAGTGCAGAGGATG+AGG | - | tig0019645:160013-160032 | Msa1375260:intron | 50.0% |
| TGCAGAGGATGAGGTCAATG+TGG | - | tig0019645:160022-160041 | Msa1375260:intron | 50.0% | |
| ! | TTTCATCCTTTTCCTGGGGG+AGG | - | tig0019645:160050-160069 | Msa1375260:intron | 50.0% |
| ! | TTCATCCTTTTCCTGGGGGA+GGG | - | tig0019645:160051-160070 | Msa1375260:intron | 50.0% |
| AGGGCTTGTCTATGGAACCA+AGG | - | tig0019645:160070-160089 | Msa1375260:intron | 50.0% | |
| TGATAACCCTTTGCTCGTGG+TGG | - | tig0019645:160139-160158 | Msa1375260:CDS | 50.0% | |
| CTACAACCACCACGAGCAAA+GGG | + | tig0019645:160148-160167 | None:intergenic | 50.0% | |
| TGGATCTGGTTACTTCCCTG+AGG | - | tig0019645:160221-160240 | Msa1375260:five_prime_UTR | 50.0% | |
| TCACCCTTTCCTTCTGCTCT+TGG | - | tig0019645:160358-160377 | Msa1375260:five_prime_UTR | 50.0% | |
| ! | CCTGGTGTTGGAATTCTGGG+AGG | + | tig0019645:153584-153603 | None:intergenic | 55.0% |
| CCTCCCAGAATTCCAACACC+AGG | - | tig0019645:153581-153600 | Msa1375260:intron | 55.0% | |
| ACCGTGGGGCAGGCAATAAA+GGG | + | tig0019645:154774-154793 | None:intergenic | 55.0% | |
| GCTGCAGCAATAGTAGACCG+TGG | + | tig0019645:154790-154809 | None:intergenic | 55.0% | |
| ACGCCTTGGGTGGTAAGCTT+TGG | - | tig0019645:155008-155027 | Msa1375260:intron | 55.0% | |
| GGGATGCTAGCTCATCAGAG+TGG | - | tig0019645:156028-156047 | Msa1375260:intron | 55.0% | |
| ! | TGAAGACAAGGCGCTCGCTA+CGG | - | tig0019645:156428-156447 | Msa1375260:CDS | 55.0% |
| ! | GCTGTGCATTTTCACCCGCA+TGG | - | tig0019645:156451-156470 | Msa1375260:CDS | 55.0% |
| GTGACAAAAACAGCCGGTGG+AGG | + | tig0019645:156669-156688 | None:intergenic | 55.0% | |
| ! | GCTCCGGTTTGAGAGCTAGT+GGG | + | tig0019645:156834-156853 | None:intergenic | 55.0% |
| ! | TGCTCCGGTTTGAGAGCTAG+TGG | + | tig0019645:156835-156854 | None:intergenic | 55.0% |
| !! | TCATGTTGGCTTGCTTCGGC+TGG | + | tig0019645:156948-156967 | None:intergenic | 55.0% |
| CGCGTTGAACTCTCTGAGCT+TGG | - | tig0019645:156990-157009 | Msa1375260:CDS | 55.0% | |
| ! | TGGGAGCTGCCTTTTCTGCA+AGG | - | tig0019645:157053-157072 | Msa1375260:CDS | 55.0% |
| CCATTGGGCATTCCTGAAGG+TGG | + | tig0019645:157188-157207 | None:intergenic | 55.0% | |
| CCACCTTCAGGAATGCCCAA+TGG | - | tig0019645:157185-157204 | Msa1375260:intron | 55.0% | |
| ! | AGCTGCAGTGGCCACTGATT+TGG | + | tig0019645:157369-157388 | None:intergenic | 55.0% |
| ! | CATCTTTGTAGTGGGGCGCA+GGG | + | tig0019645:157449-157468 | None:intergenic | 55.0% |
| TACCACATGTCGTCCTCTGC+AGG | - | tig0019645:157480-157499 | Msa1375260:CDS | 55.0% | |
| TACCTGCAGAGGACGACATG+TGG | + | tig0019645:157485-157504 | None:intergenic | 55.0% | |
| ACTCTTGTACACCAGGAGCC+TGG | - | tig0019645:157847-157866 | Msa1375260:intron | 55.0% | |
| ATGTTGGAAGTCCAGGCTCC+TGG | + | tig0019645:157861-157880 | None:intergenic | 55.0% | |
| GCTCCGGATATATTCCCTGG+AGG | - | tig0019645:157924-157943 | Msa1375260:intron | 55.0% | |
| GTCGTACGTTGCTTCCTCCA+GGG | + | tig0019645:157941-157960 | None:intergenic | 55.0% | |
| AGTCGTACGTTGCTTCCTCC+AGG | + | tig0019645:157942-157961 | None:intergenic | 55.0% | |
| GGAGGGAGGGACAGAGATAT+GGG | + | tig0019645:159012-159031 | None:intergenic | 55.0% | |
| AGGAGGGAGGGACAGAGATA+TGG | + | tig0019645:159013-159032 | None:intergenic | 55.0% | |
| ! | CAGGGTGCTTTCTAGTGCAG+AGG | - | tig0019645:160007-160026 | Msa1375260:intron | 55.0% |
| CCTACAACCACCACGAGCAA+AGG | + | tig0019645:160149-160168 | None:intergenic | 55.0% | |
| CCTTTGCTCGTGGTGGTTGT+AGG | - | tig0019645:160146-160165 | Msa1375260:CDS | 55.0% | |
| TGCTCGTGGTGGTTGTAGGA+AGG | - | tig0019645:160150-160169 | Msa1375260:CDS | 55.0% | |
| CAATGACTCAGCCTCGACCC+TGG | + | tig0019645:154728-154747 | None:intergenic | 60.0% | |
| GCCCTTTATTGCCTGCCCCA+CGG | - | tig0019645:154770-154789 | Msa1375260:intron | 60.0% | |
| GACCGTGGGGCAGGCAATAA+AGG | + | tig0019645:154775-154794 | None:intergenic | 60.0% | |
| GCAATAGTAGACCGTGGGGC+AGG | + | tig0019645:154784-154803 | None:intergenic | 60.0% | |
| TTGGCCACAGAAGGACGCCT+TGG | - | tig0019645:154994-155013 | Msa1375260:intron | 60.0% | |
| TGGCCACAGAAGGACGCCTT+GGG | - | tig0019645:154995-155014 | Msa1375260:intron | 60.0% | |
| GGGCCCACAACACTTTCAGG+AGG | + | tig0019645:155143-155162 | None:intergenic | 60.0% | |
| ! | GAAGACAAGGCGCTCGCTAC+GGG | - | tig0019645:156429-156448 | Msa1375260:CDS | 60.0% |
| CCTCCCTACCACCCATTGTG+AGG | + | tig0019645:156911-156930 | None:intergenic | 60.0% | |
| CCTCACAATGGGTGGTAGGG+AGG | - | tig0019645:156908-156927 | Msa1375260:CDS | 60.0% | |
| GAGCTAGCTGTGCCACCTTC+AGG | - | tig0019645:157173-157192 | Msa1375260:intron | 60.0% | |
| ! | GCATCTTTGTAGTGGGGCGC+AGG | + | tig0019645:157450-157469 | None:intergenic | 60.0% |
| CAGGGACTAAAACTGGGCGC+AGG | + | tig0019645:158312-158331 | None:intergenic | 60.0% | |
| ACAAGCCCTCCCCCAGGAAA+AGG | + | tig0019645:160059-160078 | None:intergenic | 60.0% | |
| ! | CCACCCAAGGCGTCCTTCTG+TGG | + | tig0019645:155001-155020 | None:intergenic | 65.0% |
| CCACAGAAGGACGCCTTGGG+TGG | - | tig0019645:154998-155017 | Msa1375260:intron | 65.0% | |
| CCATAGACAAGCCCTCCCCC+AGG | + | tig0019645:160065-160084 | None:intergenic | 65.0% | |
| CCTGGGGGAGGGCTTGTCTA+TGG | - | tig0019645:160062-160081 | Msa1375260:intron | 65.0% | |
| ! | GCGCGCGTGCGCAGGAGGGA+GGG | + | tig0019645:159025-159044 | None:intergenic | 80.0% |
| ! | GTGCGCGCGCGTGCGCAGGA+GGG | + | tig0019645:159029-159048 | None:intergenic | 80.0% |
| ! | TGTGCGCGCGCGTGCGCAGG+AGG | + | tig0019645:159030-159049 | None:intergenic | 80.0% |
| ! | GTGTGTGCGCGCGCGTGCGC+AGG | + | tig0019645:159033-159052 | None:intergenic | 80.0% |
| ! | CGCGCGCGTGCGCAGGAGGG+AGG | + | tig0019645:159026-159045 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0019645 | gene | 153145 | 160561 | 153145 | ID=Msa1375260;Name=Msa1375260 |
| tig0019645 | mRNA | 153145 | 160561 | 153145 | ID=Msa1375260-mRNA-1;Parent=Msa1375260;Name=Msa1375260-mRNA-1;_AED=0.04;_eAED=0.04;_QI=378|1|1|1|1|1|13|292|743 |
| tig0019645 | exon | 153145 | 153538 | 153145 | ID=Msa1375260-mRNA-1:exon:4376;Parent=Msa1375260-mRNA-1 |
| tig0019645 | exon | 153615 | 153728 | 153615 | ID=Msa1375260-mRNA-1:exon:4375;Parent=Msa1375260-mRNA-1 |
| tig0019645 | exon | 154285 | 154398 | 154285 | ID=Msa1375260-mRNA-1:exon:4374;Parent=Msa1375260-mRNA-1 |
| tig0019645 | exon | 155583 | 155643 | 155583 | ID=Msa1375260-mRNA-1:exon:4373;Parent=Msa1375260-mRNA-1 |
| tig0019645 | exon | 155753 | 155953 | 155753 | ID=Msa1375260-mRNA-1:exon:4372;Parent=Msa1375260-mRNA-1 |
| tig0019645 | exon | 156205 | 157106 | 156205 | ID=Msa1375260-mRNA-1:exon:4371;Parent=Msa1375260-mRNA-1 |
| tig0019645 | exon | 157208 | 157333 | 157208 | ID=Msa1375260-mRNA-1:exon:4370;Parent=Msa1375260-mRNA-1 |
| tig0019645 | exon | 157462 | 157529 | 157462 | ID=Msa1375260-mRNA-1:exon:4369;Parent=Msa1375260-mRNA-1 |
| tig0019645 | exon | 157637 | 157745 | 157637 | ID=Msa1375260-mRNA-1:exon:4368;Parent=Msa1375260-mRNA-1 |
| tig0019645 | exon | 158687 | 158771 | 158687 | ID=Msa1375260-mRNA-1:exon:4367;Parent=Msa1375260-mRNA-1 |
| tig0019645 | exon | 158861 | 158977 | 158861 | ID=Msa1375260-mRNA-1:exon:4366;Parent=Msa1375260-mRNA-1 |
| tig0019645 | exon | 159114 | 159266 | 159114 | ID=Msa1375260-mRNA-1:exon:4365;Parent=Msa1375260-mRNA-1 |
| tig0019645 | exon | 160104 | 160561 | 160104 | ID=Msa1375260-mRNA-1:exon:4364;Parent=Msa1375260-mRNA-1 |
| tig0019645 | five_prime_UTR | 160184 | 160561 | 160184 | ID=Msa1375260-mRNA-1:five_prime_utr;Parent=Msa1375260-mRNA-1 |
| tig0019645 | CDS | 160104 | 160183 | 160104 | ID=Msa1375260-mRNA-1:cds;Parent=Msa1375260-mRNA-1 |
| tig0019645 | CDS | 159114 | 159266 | 159114 | ID=Msa1375260-mRNA-1:cds;Parent=Msa1375260-mRNA-1 |
| tig0019645 | CDS | 158861 | 158977 | 158861 | ID=Msa1375260-mRNA-1:cds;Parent=Msa1375260-mRNA-1 |
| tig0019645 | CDS | 158687 | 158771 | 158687 | ID=Msa1375260-mRNA-1:cds;Parent=Msa1375260-mRNA-1 |
| tig0019645 | CDS | 157637 | 157745 | 157637 | ID=Msa1375260-mRNA-1:cds;Parent=Msa1375260-mRNA-1 |
| tig0019645 | CDS | 157462 | 157529 | 157462 | ID=Msa1375260-mRNA-1:cds;Parent=Msa1375260-mRNA-1 |
| tig0019645 | CDS | 157208 | 157333 | 157208 | ID=Msa1375260-mRNA-1:cds;Parent=Msa1375260-mRNA-1 |
| tig0019645 | CDS | 156205 | 157106 | 156205 | ID=Msa1375260-mRNA-1:cds;Parent=Msa1375260-mRNA-1 |
| tig0019645 | CDS | 155753 | 155953 | 155753 | ID=Msa1375260-mRNA-1:cds;Parent=Msa1375260-mRNA-1 |
| tig0019645 | CDS | 155583 | 155643 | 155583 | ID=Msa1375260-mRNA-1:cds;Parent=Msa1375260-mRNA-1 |
| tig0019645 | CDS | 154285 | 154398 | 154285 | ID=Msa1375260-mRNA-1:cds;Parent=Msa1375260-mRNA-1 |
| tig0019645 | CDS | 153615 | 153728 | 153615 | ID=Msa1375260-mRNA-1:cds;Parent=Msa1375260-mRNA-1 |
| tig0019645 | CDS | 153437 | 153538 | 153437 | ID=Msa1375260-mRNA-1:cds;Parent=Msa1375260-mRNA-1 |
| tig0019645 | three_prime_UTR | 153145 | 153436 | 153145 | ID=Msa1375260-mRNA-1:three_prime_utr;Parent=Msa1375260-mRNA-1 |
| Gene Sequence |
| Protein sequence |
