Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0328790 | XP_013464198.1 | 98.473 | 393 | 4 | 2 | 1 | 391 | 1 | 393 | 0.0 | 791 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0328790 | sp|Q0WU02|MTP10_ARATH | 75.806 | 372 | 88 | 1 | 19 | 390 | 59 | 428 | 0.0 | 576 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0025060 | Msa0328790 | 0.800979 | 1.117842e-48 | -8.615850e-47 |
| Msa0025090 | Msa0328790 | 0.801290 | 9.653402e-49 | -8.615850e-47 |
| Msa0075370 | Msa0328790 | 0.814430 | 1.547214e-51 | -8.615850e-47 |
| Msa0123310 | Msa0328790 | 0.801062 | 1.074805e-48 | -8.615850e-47 |
| Msa0139280 | Msa0328790 | 0.804429 | 2.169507e-49 | -8.615850e-47 |
| Msa0167800 | Msa0328790 | 0.801923 | 7.159326e-49 | -8.615850e-47 |
| Msa0290750 | Msa0328790 | 0.959304 | 2.699813e-117 | -8.615850e-47 |
| Msa0328790 | Msa0370350 | 0.814467 | 1.518129e-51 | -8.615850e-47 |
| Msa0328790 | Msa0379350 | 0.829454 | 5.102050e-55 | -8.615850e-47 |
| Msa0328790 | Msa0384130 | 0.848334 | 6.550189e-60 | -8.615850e-47 |
| Msa0328790 | Msa0428860 | 0.808638 | 2.807436e-50 | -8.615850e-47 |
| Msa0328790 | Msa0434840 | 0.804753 | 1.857092e-49 | -8.615850e-47 |
| Msa0328790 | Msa0478750 | 0.803840 | 2.877432e-49 | -8.615850e-47 |
| Msa0328790 | Msa0482360 | -0.805686 | 1.184194e-49 | -8.615850e-47 |
| Msa0328790 | Msa0522830 | 0.826880 | 2.127750e-54 | -8.615850e-47 |
| Msa0328790 | Msa0553940 | 0.801683 | 8.019015e-49 | -8.615850e-47 |
| Msa0328790 | Msa0608030 | 0.801065 | 1.073421e-48 | -8.615850e-47 |
| Msa0328790 | Msa0742690 | 0.807301 | 5.405380e-50 | -8.615850e-47 |
| Msa0328790 | Msa0779830 | 0.801201 | 1.006821e-48 | -8.615850e-47 |
| Msa0328790 | Msa0827560 | 0.819641 | 1.044066e-52 | -8.615850e-47 |
| Msa0328790 | Msa0862750 | 0.807057 | 6.085655e-50 | -8.615850e-47 |
| Msa0328790 | Msa1066340 | 0.816862 | 4.442567e-52 | -8.615850e-47 |
| Msa0328790 | Msa1115500 | 0.873448 | 1.458670e-67 | -8.615850e-47 |
| Msa0328790 | Msa1155380 | 0.861510 | 9.756295e-64 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0328790 | MtrunA17_Chr2g0310301 | 98.473 | 393 | 4 | 2 | 1 | 391 | 1 | 393 | 0.0 | 791 |
| Msa0328790 | MtrunA17_Chr8g0357061 | 78.372 | 393 | 76 | 3 | 2 | 391 | 8 | 394 | 0.0 | 613 |
| Msa0328790 | MtrunA17_Chr3g0119281 | 65.823 | 395 | 122 | 2 | 2 | 388 | 7 | 396 | 0.0 | 523 |
| Msa0328790 | MtrunA17_Chr7g0222641 | 61.942 | 381 | 136 | 5 | 12 | 387 | 19 | 395 | 4.47e-160 | 455 |
| Msa0328790 | MtrunA17_Chr3g0108381 | 56.707 | 328 | 135 | 4 | 61 | 387 | 72 | 393 | 2.19e-127 | 372 |
| Msa0328790 | MtrunA17_Chr5g0432881 | 52.890 | 346 | 151 | 5 | 44 | 388 | 53 | 387 | 4.42e-120 | 353 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0328790 | AT1G16310.1 | 75.806 | 372 | 88 | 1 | 19 | 390 | 59 | 428 | 0.0 | 576 |
| Msa0328790 | AT1G79520.1 | 71.654 | 381 | 103 | 2 | 14 | 391 | 24 | 402 | 0.0 | 543 |
| Msa0328790 | AT1G79520.2 | 69.466 | 393 | 103 | 3 | 14 | 391 | 24 | 414 | 0.0 | 534 |
| Msa0328790 | AT1G79520.3 | 76.471 | 340 | 80 | 0 | 52 | 391 | 10 | 349 | 0.0 | 534 |
| Msa0328790 | AT1G79520.4 | 76.471 | 340 | 80 | 0 | 52 | 391 | 10 | 349 | 0.0 | 534 |
| Msa0328790 | AT1G16310.2 | 79.048 | 315 | 66 | 0 | 76 | 390 | 1 | 315 | 0.0 | 509 |
| Msa0328790 | AT2G39450.1 | 58.673 | 392 | 155 | 4 | 2 | 390 | 5 | 392 | 5.68e-140 | 404 |
| Msa0328790 | AT3G58060.2 | 54.381 | 331 | 147 | 3 | 61 | 387 | 71 | 401 | 1.01e-121 | 358 |
| Msa0328790 | AT3G58060.1 | 54.381 | 331 | 147 | 3 | 61 | 387 | 71 | 401 | 1.01e-121 | 358 |
Find 85 sgRNAs with CRISPR-Local
Find 233 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAAGTTAACATACCTTATA+TGG | 0.187659 | 2_4:-41661343 | Msa0328790:CDS |
| ATCATCCAATTCACCTTTAC+TGG | 0.222158 | 2_4:+41662332 | None:intergenic |
| GTTCATGGTGGTTCCATATA+AGG | 0.230476 | 2_4:+41661330 | None:intergenic |
| ACAAAAGCTCTTTCAACTTC+TGG | 0.237828 | 2_4:+41661164 | None:intergenic |
| GTTAACTTTGCCAAGAATTC+AGG | 0.263487 | 2_4:+41661356 | None:intergenic |
| TTCTAGCTGTCAAGTTCTTC+TGG | 0.275479 | 2_4:-41662169 | Msa0328790:CDS |
| ATGAAGTTTCAAACGGTTCT+TGG | 0.284276 | 2_4:-41665071 | Msa0328790:CDS |
| AACAGCACCACCTGAATTCT+TGG | 0.286135 | 2_4:-41661366 | Msa0328790:CDS |
| TTGTTTATGGATATGTTTAT+AGG | 0.297926 | 2_4:-41661029 | Msa0328790:three_prime_UTR |
| CTATGTGCTTGATTTGTTCA+TGG | 0.301014 | 2_4:+41661315 | None:intergenic |
| TGTTTATGGATATGTTTATA+GGG | 0.304077 | 2_4:-41661028 | Msa0328790:three_prime_UTR |
| GTTTATAGGGTTTGATACTT+TGG | 0.304196 | 2_4:-41661015 | Msa0328790:three_prime_UTR |
| GAATTGGATGATCGGGATTA+TGG | 0.321624 | 2_4:-41662321 | Msa0328790:CDS |
| TTCCAATCGGATAGTGATAT+CGG | 0.334945 | 2_4:+41662710 | None:intergenic |
| GATATAATTCATCGTTTAGT+TGG | 0.336334 | 2_4:-41660976 | Msa0328790:three_prime_UTR |
| ACACAAAACCTTGGTGGTTC+AGG | 0.337044 | 2_4:-41665154 | Msa0328790:five_prime_UTR |
| ACCTTTACTGGATCGACTTC+TGG | 0.344775 | 2_4:+41662344 | None:intergenic |
| CTCTTGTTTCTTGTAATACT+CGG | 0.363210 | 2_4:+41663400 | None:intergenic |
| TTTGTGCTGTGTTGGTAACT+AGG | 0.370720 | 2_4:+41665205 | None:intergenic |
| AAATCTAAGTTTAGTTTCAA+TGG | 0.375459 | 2_4:-41664991 | Msa0328790:CDS |
| ATCAACACTAGACTCTCTTT+TGG | 0.380655 | 2_4:-41662788 | Msa0328790:CDS |
| TCGATCCAGTAAAGGTGAAT+TGG | 0.389302 | 2_4:-41662337 | Msa0328790:CDS |
| CTATCACTATCAGCCATGTT+TGG | 0.392779 | 2_4:+41665117 | None:intergenic |
| TGTACGAAGAAAATTAGTTC+TGG | 0.394714 | 2_4:+41660866 | None:intergenic |
| TGCATCCGTGATGGCAACCT+TGG | 0.401323 | 2_4:-41662535 | Msa0328790:CDS |
| CTTGGTGTTGTTTGCAGCAA+AGG | 0.416822 | 2_4:-41662851 | Msa0328790:CDS |
| CGTGTACTTTCCCTATATCT+AGG | 0.419218 | 2_4:-41665275 | Msa0328790:five_prime_UTR |
| TCTTGTCTGGTTTCATATTG+TGG | 0.420819 | 2_4:-41662762 | Msa0328790:CDS |
| CCTCGAAGGATTTAATGAAA+TGG | 0.427590 | 2_4:-41663372 | Msa0328790:CDS |
| ATCACCTCAGAGAGACCTCC+TGG | 0.432671 | 2_4:+41663323 | None:intergenic |
| GTTTGGCTTGCTCATGGCAT+TGG | 0.439654 | 2_4:+41662732 | None:intergenic |
| ACAGTTAGAGCATACACATT+TGG | 0.444981 | 2_4:-41661290 | Msa0328790:CDS |
| CCATTTCATTAAATCCTTCG+AGG | 0.445178 | 2_4:+41663372 | None:intergenic |
| CTTCTTGATGAAGTTTCAAA+CGG | 0.448380 | 2_4:-41665078 | Msa0328790:CDS |
| GCATCCGTGATGGCAACCTT+GGG | 0.449922 | 2_4:-41662534 | Msa0328790:CDS |
| TGGTTGAGAAACATGTCTTC+TGG | 0.452682 | 2_4:+41661233 | None:intergenic |
| ATGGAAGCTATGCATGAAAC+TGG | 0.456771 | 2_4:-41663353 | Msa0328790:CDS |
| TTTCGCCGATGTTGTGTGCT+TGG | 0.461751 | 2_4:+41661213 | None:intergenic |
| GAGAATGTCTGGTCACTCAT+TGG | 0.462981 | 2_4:-41661392 | Msa0328790:CDS |
| ATCGGATAGTGATATCGGTT+TGG | 0.466363 | 2_4:+41662715 | None:intergenic |
| AGACAGTGATGGAGAATGTC+TGG | 0.467975 | 2_4:-41661403 | Msa0328790:CDS |
| TAAAGGTGAATTGGATGATC+GGG | 0.471055 | 2_4:-41662328 | Msa0328790:CDS |
| TGGAAAGAAACGCATGCAAC+CGG | 0.477866 | 2_4:-41662692 | Msa0328790:CDS |
| TGCATGCGTTTCTTTCCAAT+CGG | 0.484472 | 2_4:+41662697 | None:intergenic |
| TTCTGGTGGATGGATCCAAC+AGG | 0.504950 | 2_4:-41662152 | Msa0328790:CDS |
| CGAAACACTTCAAGAGAAGC+TGG | 0.507714 | 2_4:-41661195 | Msa0328790:CDS |
| AACCGATATCACTATCCGAT+TGG | 0.515935 | 2_4:-41662712 | Msa0328790:CDS |
| CATACTGATGTCTTATGCTC+AGG | 0.516704 | 2_4:+41661113 | None:intergenic |
| ATATCGGTTTGGCTTGCTCA+TGG | 0.516883 | 2_4:+41662726 | None:intergenic |
| ATTTGGTGCAGATTACTTTG+TGG | 0.527294 | 2_4:-41661273 | Msa0328790:CDS |
| CAAGCCCAAGGTTGCCATCA+CGG | 0.531642 | 2_4:+41662530 | None:intergenic |
| TGTCAAGTTCTTCTGGTGGA+TGG | 0.542414 | 2_4:-41662162 | Msa0328790:CDS |
| TTTGAAACTTCATCAAGAAG+AGG | 0.542941 | 2_4:+41665081 | None:intergenic |
| TAATGATCTGCTCTCGATTG+AGG | 0.549611 | 2_4:+41662822 | None:intergenic |
| CTTACAAGAATAGCTCCTGT+TGG | 0.551242 | 2_4:+41662137 | None:intergenic |
| ATAAGACATCAGTATGATGT+TGG | 0.558220 | 2_4:-41661106 | Msa0328790:exon |
| GCCAGAAGTCGATCCAGTAA+AGG | 0.564036 | 2_4:-41662345 | Msa0328790:CDS |
| TAGCTGTCAAGTTCTTCTGG+TGG | 0.564250 | 2_4:-41662166 | Msa0328790:CDS |
| AACTTTGCCAAGAATTCAGG+TGG | 0.573238 | 2_4:+41661359 | None:intergenic |
| GTAAAGGTGAATTGGATGAT+CGG | 0.574495 | 2_4:-41662329 | Msa0328790:CDS |
| TAGGGAAAGTACACGCAAGT+GGG | 0.581356 | 2_4:+41665283 | None:intergenic |
| CACTATATACAATCAACACA+TGG | 0.581728 | 2_4:-41661430 | Msa0328790:CDS |
| ACTTGCAAAGAGTGAGAGGA+CGG | 0.587244 | 2_4:-41662899 | Msa0328790:CDS |
| TGTGTCAAATGCATGTAACT+TGG | 0.588818 | 2_4:-41662869 | Msa0328790:CDS |
| TAAACAAAACAAAACATGAA+AGG | 0.596530 | 2_4:+41661069 | None:intergenic |
| GCACAAACACAAAACCTTGG+TGG | 0.597202 | 2_4:-41665189 | Msa0328790:five_prime_UTR |
| GATGTCATTACTAATTCCGT+CGG | 0.610281 | 2_4:-41662206 | Msa0328790:CDS |
| TGATCAACAACATTCTGTGA+TGG | 0.612919 | 2_4:+41665021 | None:intergenic |
| AGCAACTTGCAAAGAGTGAG+AGG | 0.619088 | 2_4:-41662903 | Msa0328790:CDS |
| GATCAAAATCTGCAAGCCCA+AGG | 0.622295 | 2_4:+41662518 | None:intergenic |
| AACAGCGGCGGCTAATCCGA+CGG | 0.625123 | 2_4:+41662190 | None:intergenic |
| GAACTTGACAGCTAGAACAG+CGG | 0.628290 | 2_4:+41662175 | None:intergenic |
| AAACAAGAGAGACTCCTCGA+AGG | 0.629592 | 2_4:-41663386 | Msa0328790:CDS |
| ACAGCACAAACACAAAACCT+TGG | 0.629864 | 2_4:-41665192 | Msa0328790:five_prime_UTR |
| CTCAACCAAGCACACAACAT+CGG | 0.630772 | 2_4:-41661218 | Msa0328790:CDS |
| TCACCTCAGAGAGACCTCCT+GGG | 0.631079 | 2_4:+41663324 | None:intergenic |
| TGTGCTTGATTTGTTCATGG+TGG | 0.640773 | 2_4:+41661318 | None:intergenic |
| TTTCCCAGGAGGTCTCTCTG+AGG | 0.647360 | 2_4:-41663327 | Msa0328790:intron |
| ATAGGGAAAGTACACGCAAG+TGG | 0.654422 | 2_4:+41665282 | None:intergenic |
| AGGGAAAGTACACGCAAGTG+GGG | 0.664044 | 2_4:+41665284 | None:intergenic |
| CACATGGACAAAGACAGTGA+TGG | 0.674860 | 2_4:-41661414 | Msa0328790:CDS |
| AAAGAAACGCATGCAACCGG+TGG | 0.685895 | 2_4:-41662689 | Msa0328790:intron |
| TGTTTCAGGGAAACAACGCA+AGG | 0.686235 | 2_4:-41663426 | Msa0328790:intron |
| TTCAGGGAAACAACGCAAGG+TGG | 0.700523 | 2_4:-41663423 | Msa0328790:intron |
| CTTGACAGCTAGAACAGCGG+CGG | 0.725540 | 2_4:+41662178 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAAAAATATTATAAATT+AGG | + | chr2_4:41662100-41662119 | None:intergenic | 0.0% |
| !!! | AATTTATAATATTTTTTTAA+AGG | - | chr2_4:41662100-41662119 | Msa0328790:intron | 0.0% |
| !!! | TTATTATCAATTTTTTTTTC+AGG | - | chr2_4:41662504-41662523 | Msa0328790:CDS | 10.0% |
| !!! | TTCTAAAGTTTATGTTTTTT+TGG | - | chr2_4:41661254-41661273 | Msa0328790:CDS | 15.0% |
| !! | AAAGAGAAAAAGAATAAAAT+AGG | + | chr2_4:41661455-41661474 | None:intergenic | 15.0% |
| !! | ATAGTTTATGTTTAATATGT+GGG | + | chr2_4:41661639-41661658 | None:intergenic | 15.0% |
| !! | TATAGTTTATGTTTAATATG+TGG | + | chr2_4:41661640-41661659 | None:intergenic | 15.0% |
| !!! | TAGTTTTATTGTAATAATAG+TGG | - | chr2_4:41661812-41661831 | Msa0328790:intron | 15.0% |
| !!! | AGTTTTATTGTAATAATAGT+GGG | - | chr2_4:41661813-41661832 | Msa0328790:intron | 15.0% |
| !!! | ACTTACAATTTTCTTATAAA+CGG | - | chr2_4:41662905-41662924 | Msa0328790:CDS | 15.0% |
| !!! | AATAACATAGTTTTTGTTTA+TGG | - | chr2_4:41665141-41665160 | Msa0328790:five_prime_UTR | 15.0% |
| !!! | AAATCTAAGTTTAGTTTCAA+TGG | - | chr2_4:41661192-41661211 | Msa0328790:CDS | 20.0% |
| !! | AAGAATAAAATAGGTGAAAA+AGG | + | chr2_4:41661446-41661465 | None:intergenic | 20.0% |
| !! | CATGTGTATGTTTAATATTA+AGG | - | chr2_4:41661515-41661534 | Msa0328790:intron | 20.0% |
| !!! | TCCTTTTAAATTTTCTTGTA+TGG | - | chr2_4:41661697-41661716 | Msa0328790:intron | 20.0% |
| !! | ACCATACAAGAAAATTTAAA+AGG | + | chr2_4:41661701-41661720 | None:intergenic | 20.0% |
| !!! | TATCATGATCTTACTTTTTA+AGG | + | chr2_4:41661776-41661795 | None:intergenic | 20.0% |
| !!! | GTTTTATTGTAATAATAGTG+GGG | - | chr2_4:41661814-41661833 | Msa0328790:intron | 20.0% |
| !! | GCAACAACAAAATAAAATAA+TGG | + | chr2_4:41661990-41662009 | None:intergenic | 20.0% |
| !! | TTAACTTTATTATGTGAACA+AGG | + | chr2_4:41662176-41662195 | None:intergenic | 20.0% |
| !!! | TATGAAAATTCTGAAATTTC+TGG | - | chr2_4:41662230-41662249 | Msa0328790:CDS | 20.0% |
| !!! | TTATTTTTCAACTTGCTTTT+AGG | - | chr2_4:41662554-41662573 | Msa0328790:intron | 20.0% |
| !! | TTAAACAAACCGTTATTATT+CGG | + | chr2_4:41663102-41663121 | None:intergenic | 20.0% |
| !! | TAATGGAAAAATACTAATTG+TGG | + | chr2_4:41664134-41664153 | None:intergenic | 20.0% |
| !!! | TTTAATTAGTTCAACTGTTT+TGG | - | chr2_4:41664448-41664467 | Msa0328790:intron | 20.0% |
| !! | TAAACAAAACAAAACATGAA+AGG | + | chr2_4:41665117-41665136 | None:intergenic | 20.0% |
| !! | TTGTTTATGGATATGTTTAT+AGG | - | chr2_4:41665154-41665173 | Msa0328790:five_prime_UTR | 20.0% |
| !! | TGTTTATGGATATGTTTATA+GGG | - | chr2_4:41665155-41665174 | Msa0328790:five_prime_UTR | 20.0% |
| !! | AACGATTTTTCCTAGATATA+GGG | + | chr2_4:41660921-41660940 | None:intergenic | 25.0% |
| !! | TAACGATTTTTCCTAGATAT+AGG | + | chr2_4:41660922-41660941 | None:intergenic | 25.0% |
| ! | AGAAAAAAAACACAAAACCT+TGG | - | chr2_4:41661020-41661039 | Msa0328790:three_prime_UTR | 25.0% |
| ! | AAATTTAAGAATGACTCACT+AGG | + | chr2_4:41661231-41661250 | None:intergenic | 25.0% |
| ! | AAAGCAAAGAACAACATAAT+GGG | + | chr2_4:41661302-41661321 | None:intergenic | 25.0% |
| ! | AAAAGCAAAGAACAACATAA+TGG | + | chr2_4:41661303-41661322 | None:intergenic | 25.0% |
| !! | AAAGTTTCAATTTTGTGTGA+TGG | - | chr2_4:41661350-41661369 | Msa0328790:CDS | 25.0% |
| !! | AAGTTTCAATTTTGTGTGAT+GGG | - | chr2_4:41661351-41661370 | Msa0328790:CDS | 25.0% |
| ! | GTGTATGTTTAATATTAAGG+TGG | - | chr2_4:41661518-41661537 | Msa0328790:intron | 25.0% |
| ! | AGACTTTGTAGTAAAAATCA+TGG | + | chr2_4:41661573-41661592 | None:intergenic | 25.0% |
| !!! | CTTTTAGATTCTCTGTTTTT+TGG | - | chr2_4:41661726-41661745 | Msa0328790:intron | 25.0% |
| ! | TTGATGAATATCCATCATAA+AGG | + | chr2_4:41661861-41661880 | None:intergenic | 25.0% |
| ! | GACAAAATAATGATGTGTAA+AGG | + | chr2_4:41662072-41662091 | None:intergenic | 25.0% |
| ! | TTATTATGTGAACAAGGTAA+TGG | + | chr2_4:41662170-41662189 | None:intergenic | 25.0% |
| !! | AAAACTGATTTAAAGATGCT+TGG | - | chr2_4:41662403-41662422 | Msa0328790:intron | 25.0% |
| !! | TCTATTGGAATATTTTCTAG+TGG | + | chr2_4:41662454-41662473 | None:intergenic | 25.0% |
| ! | TCAAAAGCTACAAATTCTAT+TGG | + | chr2_4:41662469-41662488 | None:intergenic | 25.0% |
| !! | TTTGTAGCTTTTGACAATTA+AGG | - | chr2_4:41662475-41662494 | Msa0328790:intron | 25.0% |
| !!! | TCAATTTTTTTTTCAGGTGA+AGG | - | chr2_4:41662510-41662529 | Msa0328790:CDS | 25.0% |
| !!! | CAATTTTTTTTTCAGGTGAA+GGG | - | chr2_4:41662511-41662530 | Msa0328790:CDS | 25.0% |
| !! | ACACATACTAGTTTATTAAG+TGG | - | chr2_4:41662674-41662693 | Msa0328790:intron | 25.0% |
| ! | ATCACCAATGTTATCAAATA+GGG | + | chr2_4:41663152-41663171 | None:intergenic | 25.0% |
| ! | AATCACCAATGTTATCAAAT+AGG | + | chr2_4:41663153-41663172 | None:intergenic | 25.0% |
| ! | AAAATTGCATTATGTTTGTC+AGG | - | chr2_4:41663248-41663267 | Msa0328790:intron | 25.0% |
| ! | TGATTACCTTTGCAAAAATT+TGG | + | chr2_4:41663702-41663721 | None:intergenic | 25.0% |
| !! | AGTATCATTCTTTTTCTTAC+AGG | - | chr2_4:41663811-41663830 | Msa0328790:intron | 25.0% |
| ! | AGTTACGGGAAATTTATTAA+TGG | + | chr2_4:41664151-41664170 | None:intergenic | 25.0% |
| !!! | ATTTTTAAAACACTGCTTCT+AGG | + | chr2_4:41664302-41664321 | None:intergenic | 25.0% |
| !! | TTTACTATGGTCAGTTATTT+TGG | + | chr2_4:41664415-41664434 | None:intergenic | 25.0% |
| ! | AAAATAACTGACCATAGTAA+AGG | - | chr2_4:41664414-41664433 | Msa0328790:intron | 25.0% |
| ! | GAACTAATTAAACCTTAAAC+AGG | + | chr2_4:41664440-41664459 | None:intergenic | 25.0% |
| ! | AAAAATGGTCGAAAAATTCT+AGG | + | chr2_4:41664514-41664533 | None:intergenic | 25.0% |
| !!! | AGAATTTTTCGACCATTTTT+CGG | - | chr2_4:41664514-41664533 | Msa0328790:intron | 25.0% |
| !!! | CTTTTTTGTCATATGATTGT+TGG | - | chr2_4:41664659-41664678 | Msa0328790:intron | 25.0% |
| ! | CAAAGTTAACATACCTTATA+TGG | - | chr2_4:41664840-41664859 | Msa0328790:intron | 25.0% |
| ! | GATATAATTCATCGTTTAGT+TGG | - | chr2_4:41665207-41665226 | Msa0328790:five_prime_UTR | 25.0% |
| AAAAAAACACAAAACCTTGG+TGG | - | chr2_4:41661023-41661042 | Msa0328790:three_prime_UTR | 30.0% | |
| AAACACACAAAAACCAAACA+TGG | - | chr2_4:41661053-41661072 | Msa0328790:three_prime_UTR | 30.0% | |
| ! | TTTGAAACTTCATCAAGAAG+AGG | + | chr2_4:41661105-41661124 | None:intergenic | 30.0% |
| CTTCTTGATGAAGTTTCAAA+CGG | - | chr2_4:41661105-41661124 | Msa0328790:exon | 30.0% | |
| AGGTGAAAAAGGATTAACAA+TGG | + | chr2_4:41661435-41661454 | None:intergenic | 30.0% | |
| !!! | TTACTACAAAGTCTAGCTTT+TGG | - | chr2_4:41661579-41661598 | Msa0328790:intron | 30.0% |
| !!! | TCTAGCTTTTGGAAAAATCA+CGG | - | chr2_4:41661590-41661609 | Msa0328790:intron | 30.0% |
| !!! | TTAGATTCTCTGTTTTTTGG+TGG | - | chr2_4:41661729-41661748 | Msa0328790:intron | 30.0% |
| GGGGATCTTTAATTAAATGA+AGG | - | chr2_4:41661833-41661852 | Msa0328790:intron | 30.0% | |
| ! | AAGCTTTGATTGTGTACAAA+TGG | + | chr2_4:41662019-41662038 | None:intergenic | 30.0% |
| TGTGTAAAGGAATTAAGTGA+AGG | + | chr2_4:41662059-41662078 | None:intergenic | 30.0% | |
| !!! | TAATTTTTTACCAGCTTCTC+AGG | + | chr2_4:41662267-41662286 | None:intergenic | 30.0% |
| CATGACTTAAAGTGTATGTT+TGG | - | chr2_4:41662343-41662362 | Msa0328790:CDS | 30.0% | |
| ! | AAAGTGTATGTTTGGTTTCA+TGG | - | chr2_4:41662351-41662370 | Msa0328790:CDS | 30.0% |
| ! | GAATGTGAAGTGTTTATGTT+TGG | + | chr2_4:41662596-41662615 | None:intergenic | 30.0% |
| !! | CTAGTATGTGTTTGATTTTG+CGG | + | chr2_4:41662665-41662684 | None:intergenic | 30.0% |
| ! | CTCTTGTTTCTTGTAATACT+CGG | + | chr2_4:41662786-41662805 | None:intergenic | 30.0% |
| TATAAAGTGTGGTCAAATAG+TGG | + | chr2_4:41663064-41663083 | None:intergenic | 30.0% | |
| ACACGATTTAGTATAAAGTG+TGG | + | chr2_4:41663075-41663094 | None:intergenic | 30.0% | |
| TCACCAATGTTATCAAATAG+GGG | + | chr2_4:41663151-41663170 | None:intergenic | 30.0% | |
| TTGAATCGATTAGGTTCAAT+TGG | + | chr2_4:41663177-41663196 | None:intergenic | 30.0% | |
| TACATGTGTTTGAATCGATT+AGG | + | chr2_4:41663186-41663205 | None:intergenic | 30.0% | |
| ! | AAATACTTATGTTTCTGTGC+AGG | - | chr2_4:41663612-41663631 | Msa0328790:intron | 30.0% |
| ! | AATACTTATGTTTCTGTGCA+GGG | - | chr2_4:41663613-41663632 | Msa0328790:intron | 30.0% |
| !!! | TTAGTTCAACTGTTTTGGTT+TGG | - | chr2_4:41664453-41664472 | Msa0328790:intron | 30.0% |
| CACTATATACAATCAACACA+TGG | - | chr2_4:41664753-41664772 | Msa0328790:intron | 30.0% | |
| ATAAGACATCAGTATGATGT+TGG | - | chr2_4:41665077-41665096 | Msa0328790:CDS | 30.0% | |
| GTTTATAGGGTTTGATACTT+TGG | - | chr2_4:41665168-41665187 | Msa0328790:five_prime_UTR | 30.0% | |
| !!! | GTTTTTTTTCTGAACCACCA+AGG | + | chr2_4:41661011-41661030 | None:intergenic | 35.0% |
| ATGAAGTTTCAAACGGTTCT+TGG | - | chr2_4:41661112-41661131 | Msa0328790:CDS | 35.0% | |
| TGATCAACAACATTCTGTGA+TGG | + | chr2_4:41661165-41661184 | None:intergenic | 35.0% | |
| !! | CAAAGAACAACATAATGGGT+CGG | + | chr2_4:41661298-41661317 | None:intergenic | 35.0% |
| AAATGAAGGAGCCTTTATGA+TGG | - | chr2_4:41661847-41661866 | Msa0328790:intron | 35.0% | |
| TATCAATTTACCTGAGAAGC+TGG | - | chr2_4:41662254-41662273 | Msa0328790:CDS | 35.0% | |
| CCATTTCATTAAATCCTTCG+AGG | + | chr2_4:41662814-41662833 | None:intergenic | 35.0% | |
| CCTCGAAGGATTTAATGAAA+TGG | - | chr2_4:41662811-41662830 | Msa0328790:CDS | 35.0% | |
| !!! | GATTTTTAGCGTGTCAATTG+CGG | - | chr2_4:41662976-41662995 | Msa0328790:intron | 35.0% |
| CGTGTATTGCCGAATAATAA+CGG | - | chr2_4:41663090-41663109 | Msa0328790:intron | 35.0% | |
| TGTGTCAAATGCATGTAACT+TGG | - | chr2_4:41663314-41663333 | Msa0328790:intron | 35.0% | |
| ! | ATCAACACTAGACTCTCTTT+TGG | - | chr2_4:41663395-41663414 | Msa0328790:CDS | 35.0% |
| ! | TCTTGTCTGGTTTCATATTG+TGG | - | chr2_4:41663421-41663440 | Msa0328790:CDS | 35.0% |
| TTCCAATCGGATAGTGATAT+CGG | + | chr2_4:41663476-41663495 | None:intergenic | 35.0% | |
| ATCATCCAATTCACCTTTAC+TGG | + | chr2_4:41663854-41663873 | None:intergenic | 35.0% | |
| GTAAAGGTGAATTGGATGAT+CGG | - | chr2_4:41663854-41663873 | Msa0328790:intron | 35.0% | |
| TAAAGGTGAATTGGATGATC+GGG | - | chr2_4:41663855-41663874 | Msa0328790:intron | 35.0% | |
| GATGTCATTACTAATTCCGT+CGG | - | chr2_4:41663977-41663996 | Msa0328790:intron | 35.0% | |
| ! | ATTTTCTTCGCATTTCAGTG+TGG | - | chr2_4:41664085-41664104 | Msa0328790:intron | 35.0% |
| ! | GTTTTCTGATTGTGTTAACG+TGG | - | chr2_4:41664107-41664126 | Msa0328790:intron | 35.0% |
| TTTGATGTGGCTTATACGAA+AGG | + | chr2_4:41664192-41664211 | None:intergenic | 35.0% | |
| CACATCAAAATGTTGTCGAA+GGG | - | chr2_4:41664203-41664222 | Msa0328790:intron | 35.0% | |
| ACATCAAAATGTTGTCGAAG+GGG | - | chr2_4:41664204-41664223 | Msa0328790:intron | 35.0% | |
| ! | ATGATTGTTTGCTGGTTAGA+GGG | - | chr2_4:41664239-41664258 | Msa0328790:intron | 35.0% |
| AGTAATCCCCAAAGTTACTT+CGG | - | chr2_4:41664570-41664589 | Msa0328790:intron | 35.0% | |
| TGTACTTCCGAAGTAACTTT+GGG | + | chr2_4:41664580-41664599 | None:intergenic | 35.0% | |
| AACTCAATGTTTGTATAGCC+CGG | - | chr2_4:41664613-41664632 | Msa0328790:intron | 35.0% | |
| GTTAACTTTGCCAAGAATTC+AGG | + | chr2_4:41664830-41664849 | None:intergenic | 35.0% | |
| !! | CTATGTGCTTGATTTGTTCA+TGG | + | chr2_4:41664871-41664890 | None:intergenic | 35.0% |
| ACAGTTAGAGCATACACATT+TGG | - | chr2_4:41664893-41664912 | Msa0328790:intron | 35.0% | |
| !! | ATTTGGTGCAGATTACTTTG+TGG | - | chr2_4:41664910-41664929 | Msa0328790:intron | 35.0% |
| ACAAAAGCTCTTTCAACTTC+TGG | + | chr2_4:41665022-41665041 | None:intergenic | 35.0% | |
| CGTGTACTTTCCCTATATCT+AGG | - | chr2_4:41660908-41660927 | Msa0328790:three_prime_UTR | 40.0% | |
| !! | TTTGTGCTGTGTTGGTAACT+AGG | + | chr2_4:41660981-41661000 | None:intergenic | 40.0% |
| ! | GTTTTGTGTTTGTGCTGTGT+TGG | + | chr2_4:41660989-41661008 | None:intergenic | 40.0% |
| ACAGCACAAACACAAAACCT+TGG | - | chr2_4:41660991-41661010 | Msa0328790:three_prime_UTR | 40.0% | |
| CTATCACTATCAGCCATGTT+TGG | + | chr2_4:41661069-41661088 | None:intergenic | 40.0% | |
| ATGTGGGTATGTCAGAATCA+CGG | + | chr2_4:41661623-41661642 | None:intergenic | 40.0% | |
| GATGCTTGGATGATGTTGAT+TGG | - | chr2_4:41662417-41662436 | Msa0328790:intron | 40.0% | |
| GAAACAGAGAAAGTAGGCAA+AGG | + | chr2_4:41662743-41662762 | None:intergenic | 40.0% | |
| TTGCCTACTTTCTCTGTTTC+AGG | - | chr2_4:41662743-41662762 | Msa0328790:CDS | 40.0% | |
| TGCCTACTTTCTCTGTTTCA+GGG | - | chr2_4:41662744-41662763 | Msa0328790:CDS | 40.0% | |
| TTCCCTGAAACAGAGAAAGT+AGG | + | chr2_4:41662749-41662768 | None:intergenic | 40.0% | |
| ATGGAAGCTATGCATGAAAC+TGG | - | chr2_4:41662830-41662849 | Msa0328790:CDS | 40.0% | |
| !!! | CATGAAACTGGTTTTTTCCC+AGG | - | chr2_4:41662842-41662861 | Msa0328790:CDS | 40.0% |
| ! | TTGCGGATTGCGGAAAATAT+CGG | - | chr2_4:41662993-41663012 | Msa0328790:intron | 40.0% |
| ! | GCACCCCTATTTGATAACAT+TGG | - | chr2_4:41663145-41663164 | Msa0328790:intron | 40.0% |
| TAATGATCTGCTCTCGATTG+AGG | + | chr2_4:41663364-41663383 | None:intergenic | 40.0% | |
| ! | TCTCTTTTGGATCTCTTGTC+TGG | - | chr2_4:41663408-41663427 | Msa0328790:CDS | 40.0% |
| ! | ATCGGATAGTGATATCGGTT+TGG | + | chr2_4:41663471-41663490 | None:intergenic | 40.0% |
| AACCGATATCACTATCCGAT+TGG | - | chr2_4:41663471-41663490 | Msa0328790:intron | 40.0% | |
| TGCATGCGTTTCTTTCCAAT+CGG | + | chr2_4:41663489-41663508 | None:intergenic | 40.0% | |
| AATCTAAGTTGTCCTACCAC+CGG | + | chr2_4:41663513-41663532 | None:intergenic | 40.0% | |
| !!! | CATTGTTTTTGCATCCGTGA+TGG | - | chr2_4:41663639-41663658 | Msa0328790:intron | 40.0% |
| !! | TTGCAGATTTTGATCGAGTC+CGG | - | chr2_4:41663673-41663692 | Msa0328790:intron | 40.0% |
| CTTTGCAAAAATTTGGCGAC+CGG | + | chr2_4:41663695-41663714 | None:intergenic | 40.0% | |
| TCGATCCAGTAAAGGTGAAT+TGG | - | chr2_4:41663846-41663865 | Msa0328790:intron | 40.0% | |
| GAATTGGATGATCGGGATTA+TGG | - | chr2_4:41663862-41663881 | Msa0328790:intron | 40.0% | |
| ! | TTCTAGCTGTCAAGTTCTTC+TGG | - | chr2_4:41664014-41664033 | Msa0328790:intron | 40.0% |
| CTTACAAGAATAGCTCCTGT+TGG | + | chr2_4:41664049-41664068 | None:intergenic | 40.0% | |
| AATTTCCCGTAACTCCACAA+TGG | - | chr2_4:41664157-41664176 | Msa0328790:intron | 40.0% | |
| ATTTCCCGTAACTCCACAAT+GGG | - | chr2_4:41664158-41664177 | Msa0328790:intron | 40.0% | |
| TTACACCCATTGTGGAGTTA+CGG | + | chr2_4:41664166-41664185 | None:intergenic | 40.0% | |
| AAAGGAGTTTACACCCATTG+TGG | + | chr2_4:41664174-41664193 | None:intergenic | 40.0% | |
| !! | CCTTCGACAACATTTTGATG+TGG | + | chr2_4:41664205-41664224 | None:intergenic | 40.0% |
| CCACATCAAAATGTTGTCGA+AGG | - | chr2_4:41664202-41664221 | Msa0328790:intron | 40.0% | |
| CATCAAAATGTTGTCGAAGG+GGG | - | chr2_4:41664205-41664224 | Msa0328790:intron | 40.0% | |
| TGTGTCACATGATTGTTTGC+TGG | - | chr2_4:41664231-41664250 | Msa0328790:intron | 40.0% | |
| ! | CATGATTGTTTGCTGGTTAG+AGG | - | chr2_4:41664238-41664257 | Msa0328790:intron | 40.0% |
| AATTGAACCGAACATCGAAC+TGG | - | chr2_4:41664319-41664338 | Msa0328790:intron | 40.0% | |
| CCTTAAACAGGCCTTTACTA+TGG | + | chr2_4:41664428-41664447 | None:intergenic | 40.0% | |
| CCATAGTAAAGGCCTGTTTA+AGG | - | chr2_4:41664425-41664444 | Msa0328790:intron | 40.0% | |
| TGCATGAAGCTTCCGAAAAA+TGG | + | chr2_4:41664529-41664548 | None:intergenic | 40.0% | |
| ! | AGTAACTTTGGGGATTACTC+CGG | + | chr2_4:41664569-41664588 | None:intergenic | 40.0% |
| GTACTTCCGAAGTAACTTTG+GGG | + | chr2_4:41664579-41664598 | None:intergenic | 40.0% | |
| GTGTACTTCCGAAGTAACTT+TGG | + | chr2_4:41664581-41664600 | None:intergenic | 40.0% | |
| GCAATCTGCAATGAACATTC+AGG | + | chr2_4:41664734-41664753 | None:intergenic | 40.0% | |
| AACTTTGCCAAGAATTCAGG+TGG | + | chr2_4:41664827-41664846 | None:intergenic | 40.0% | |
| GTTCATGGTGGTTCCATATA+AGG | + | chr2_4:41664856-41664875 | None:intergenic | 40.0% | |
| !! | TGTGCTTGATTTGTTCATGG+TGG | + | chr2_4:41664868-41664887 | None:intergenic | 40.0% |
| TGGTTGAGAAACATGTCTTC+TGG | + | chr2_4:41664953-41664972 | None:intergenic | 40.0% | |
| CATACTGATGTCTTATGCTC+AGG | + | chr2_4:41665073-41665092 | None:intergenic | 40.0% | |
| ! | TAGGGAAAGTACACGCAAGT+GGG | + | chr2_4:41660903-41660922 | None:intergenic | 45.0% |
| ! | ATAGGGAAAGTACACGCAAG+TGG | + | chr2_4:41660904-41660923 | None:intergenic | 45.0% |
| GCACAAACACAAAACCTTGG+TGG | - | chr2_4:41660994-41661013 | Msa0328790:three_prime_UTR | 45.0% | |
| ! | ACACAAAACCTTGGTGGTTC+AGG | - | chr2_4:41661000-41661019 | Msa0328790:three_prime_UTR | 45.0% |
| ! | TGTGTTTTCCTGAACCACCA+AGG | + | chr2_4:41661040-41661059 | None:intergenic | 45.0% |
| TGTTTCAGGGAAACAACGCA+AGG | - | chr2_4:41662757-41662776 | Msa0328790:CDS | 45.0% | |
| AAACAAGAGAGACTCCTCGA+AGG | - | chr2_4:41662797-41662816 | Msa0328790:CDS | 45.0% | |
| !!! | GAAACTGGTTTTTTCCCAGG+AGG | - | chr2_4:41662845-41662864 | Msa0328790:CDS | 45.0% |
| AGCAACTTGCAAAGAGTGAG+AGG | - | chr2_4:41663280-41663299 | Msa0328790:intron | 45.0% | |
| ACTTGCAAAGAGTGAGAGGA+CGG | - | chr2_4:41663284-41663303 | Msa0328790:intron | 45.0% | |
| !! | CTTGGTGTTGTTTGCAGCAA+AGG | - | chr2_4:41663332-41663351 | Msa0328790:CDS | 45.0% |
| !! | ATATCGGTTTGGCTTGCTCA+TGG | + | chr2_4:41663460-41663479 | None:intergenic | 45.0% |
| TGGAAAGAAACGCATGCAAC+CGG | - | chr2_4:41663491-41663510 | Msa0328790:intron | 45.0% | |
| GATCAAAATCTGCAAGCCCA+AGG | + | chr2_4:41663668-41663687 | None:intergenic | 45.0% | |
| ! | CGGTCGCCAAATTTTTGCAA+AGG | - | chr2_4:41663693-41663712 | Msa0328790:intron | 45.0% |
| ! | ACCTTTACTGGATCGACTTC+TGG | + | chr2_4:41663842-41663861 | None:intergenic | 45.0% |
| GAACTTGACAGCTAGAACAG+CGG | + | chr2_4:41664011-41664030 | None:intergenic | 45.0% | |
| TAGCTGTCAAGTTCTTCTGG+TGG | - | chr2_4:41664017-41664036 | Msa0328790:intron | 45.0% | |
| TGTCAAGTTCTTCTGGTGGA+TGG | - | chr2_4:41664021-41664040 | Msa0328790:intron | 45.0% | |
| TACACCCATTGTGGAGTTAC+GGG | + | chr2_4:41664165-41664184 | None:intergenic | 45.0% | |
| TGATGTCTGGTGCAACAGTA+AGG | - | chr2_4:41664262-41664281 | Msa0328790:intron | 45.0% | |
| AGTTCGAGAGCAGTTAAAGG+CGG | + | chr2_4:41664369-41664388 | None:intergenic | 45.0% | |
| CCTAGTTCGAGAGCAGTTAA+AGG | + | chr2_4:41664372-41664391 | None:intergenic | 45.0% | |
| CCTTTAACTGCTCTCGAACT+AGG | - | chr2_4:41664369-41664388 | Msa0328790:intron | 45.0% | |
| ! | GTAACTTTGGGGATTACTCC+GGG | + | chr2_4:41664568-41664587 | None:intergenic | 45.0% |
| TTTATCCAGACGTACACGTC+CGG | + | chr2_4:41664635-41664654 | None:intergenic | 45.0% | |
| CACATGGACAAAGACAGTGA+TGG | - | chr2_4:41664769-41664788 | Msa0328790:intron | 45.0% | |
| ! | AGACAGTGATGGAGAATGTC+TGG | - | chr2_4:41664780-41664799 | Msa0328790:intron | 45.0% |
| GAGAATGTCTGGTCACTCAT+TGG | - | chr2_4:41664791-41664810 | Msa0328790:intron | 45.0% | |
| AACAGCACCACCTGAATTCT+TGG | - | chr2_4:41664817-41664836 | Msa0328790:intron | 45.0% | |
| CTCAACCAAGCACACAACAT+CGG | - | chr2_4:41664965-41664984 | Msa0328790:intron | 45.0% | |
| CGAAACACTTCAAGAGAAGC+TGG | - | chr2_4:41664988-41665007 | Msa0328790:CDS | 45.0% | |
| ! | AGGGAAAGTACACGCAAGTG+GGG | + | chr2_4:41660902-41660921 | None:intergenic | 50.0% |
| TTCAGGGAAACAACGCAAGG+TGG | - | chr2_4:41662760-41662779 | Msa0328790:CDS | 50.0% | |
| ! | AGCGTGTCAATTGCGGATTG+CGG | - | chr2_4:41662983-41663002 | Msa0328790:intron | 50.0% |
| !! | GTTTGGCTTGCTCATGGCAT+TGG | + | chr2_4:41663454-41663473 | None:intergenic | 50.0% |
| AAAGAAACGCATGCAACCGG+TGG | - | chr2_4:41663494-41663513 | Msa0328790:intron | 50.0% | |
| GCCAGAAGTCGATCCAGTAA+AGG | - | chr2_4:41663838-41663857 | Msa0328790:intron | 50.0% | |
| ! | TTCTGGTGGATGGATCCAAC+AGG | - | chr2_4:41664031-41664050 | Msa0328790:intron | 50.0% |
| GCGGTTGAACCACGAATCAA+AGG | + | chr2_4:41664350-41664369 | None:intergenic | 50.0% | |
| ! | CATTAAGCCGCCCTTTTTCC+CGG | - | chr2_4:41664547-41664566 | Msa0328790:intron | 50.0% |
| GATTACTCCGGGAAAAAGGG+CGG | + | chr2_4:41664557-41664576 | None:intergenic | 50.0% | |
| GGGGATTACTCCGGGAAAAA+GGG | + | chr2_4:41664560-41664579 | None:intergenic | 50.0% | |
| TGGGGATTACTCCGGGAAAA+AGG | + | chr2_4:41664561-41664580 | None:intergenic | 50.0% | |
| TTATCCAGACGTACACGTCC+GGG | + | chr2_4:41664634-41664653 | None:intergenic | 50.0% | |
| TTTCGCCGATGTTGTGTGCT+TGG | + | chr2_4:41664973-41664992 | None:intergenic | 50.0% | |
| TTTCCCAGGAGGTCTCTCTG+AGG | - | chr2_4:41662856-41662875 | Msa0328790:CDS | 55.0% | |
| TCACCTCAGAGAGACCTCCT+GGG | + | chr2_4:41662862-41662881 | None:intergenic | 55.0% | |
| ATCACCTCAGAGAGACCTCC+TGG | + | chr2_4:41662863-41662882 | None:intergenic | 55.0% | |
| AAACGCATGCAACCGGTGGT+AGG | - | chr2_4:41663498-41663517 | Msa0328790:intron | 55.0% | |
| TGCATCCGTGATGGCAACCT+TGG | - | chr2_4:41663648-41663667 | Msa0328790:intron | 55.0% | |
| GCATCCGTGATGGCAACCTT+GGG | - | chr2_4:41663649-41663668 | Msa0328790:intron | 55.0% | |
| CAAGCCCAAGGTTGCCATCA+CGG | + | chr2_4:41663656-41663675 | None:intergenic | 55.0% | |
| CTTGACAGCTAGAACAGCGG+CGG | + | chr2_4:41664008-41664027 | None:intergenic | 55.0% | |
| GCTGGTTAGAGGGTGATGTC+TGG | - | chr2_4:41664249-41664268 | Msa0328790:intron | 55.0% | |
| GGTCACGCCAGTTCGATGTT+CGG | + | chr2_4:41664329-41664348 | None:intergenic | 55.0% | |
| ! | CTGGCGTGACCTTTGATTCG+TGG | - | chr2_4:41664338-41664357 | Msa0328790:intron | 55.0% |
| AACAGCGGCGGCTAATCCGA+CGG | + | chr2_4:41663996-41664015 | None:intergenic | 60.0% | |
| ATAGCCCGGACGTGTACGTC+TGG | - | chr2_4:41664627-41664646 | Msa0328790:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 41660879 | 41665326 | 41660879 | ID=Msa0328790;Name=Msa0328790 |
| chr2_4 | mRNA | 41660879 | 41665326 | 41660879 | ID=Msa0328790-mRNA-1;Parent=Msa0328790;Name=Msa0328790-mRNA-1;_AED=0.23;_eAED=0.23;_QI=193|1|1|1|1|1|6|233|391 |
| chr2_4 | exon | 41660879 | 41661456 | 41660879 | ID=Msa0328790-mRNA-1:exon:12833;Parent=Msa0328790-mRNA-1 |
| chr2_4 | exon | 41662142 | 41662372 | 41662142 | ID=Msa0328790-mRNA-1:exon:12832;Parent=Msa0328790-mRNA-1 |
| chr2_4 | exon | 41662491 | 41662571 | 41662491 | ID=Msa0328790-mRNA-1:exon:12831;Parent=Msa0328790-mRNA-1 |
| chr2_4 | exon | 41662690 | 41662935 | 41662690 | ID=Msa0328790-mRNA-1:exon:12830;Parent=Msa0328790-mRNA-1 |
| chr2_4 | exon | 41663328 | 41663440 | 41663328 | ID=Msa0328790-mRNA-1:exon:12829;Parent=Msa0328790-mRNA-1 |
| chr2_4 | exon | 41664974 | 41665326 | 41664974 | ID=Msa0328790-mRNA-1:exon:12828;Parent=Msa0328790-mRNA-1 |
| chr2_4 | five_prime_UTR | 41665134 | 41665326 | 41665134 | ID=Msa0328790-mRNA-1:five_prime_utr;Parent=Msa0328790-mRNA-1 |
| chr2_4 | CDS | 41664974 | 41665133 | 41664974 | ID=Msa0328790-mRNA-1:cds;Parent=Msa0328790-mRNA-1 |
| chr2_4 | CDS | 41663328 | 41663440 | 41663328 | ID=Msa0328790-mRNA-1:cds;Parent=Msa0328790-mRNA-1 |
| chr2_4 | CDS | 41662690 | 41662935 | 41662690 | ID=Msa0328790-mRNA-1:cds;Parent=Msa0328790-mRNA-1 |
| chr2_4 | CDS | 41662491 | 41662571 | 41662491 | ID=Msa0328790-mRNA-1:cds;Parent=Msa0328790-mRNA-1 |
| chr2_4 | CDS | 41662142 | 41662372 | 41662142 | ID=Msa0328790-mRNA-1:cds;Parent=Msa0328790-mRNA-1 |
| chr2_4 | CDS | 41661112 | 41661456 | 41661112 | ID=Msa0328790-mRNA-1:cds;Parent=Msa0328790-mRNA-1 |
| chr2_4 | three_prime_UTR | 41660879 | 41661111 | 41660879 | ID=Msa0328790-mRNA-1:three_prime_utr;Parent=Msa0328790-mRNA-1 |
| Gene Sequence |
| Protein sequence |
