Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0167800 | XP_013468489.1 | 84.397 | 141 | 7 | 1 | 255 | 380 | 334 | 474 | 9.10e-70 | 237 |
| Msa0167800 | XP_013468489.1 | 88.421 | 285 | 9 | 3 | 1 | 261 | 1 | 285 | 1.86e-168 | 489 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0167800 | sp|Q94C59|PATL4_ARATH | 32.938 | 337 | 135 | 11 | 123 | 370 | 201 | 535 | 3.13e-44 | 163 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0167800 | A0A072VLM7 | 84.397 | 141 | 7 | 1 | 255 | 380 | 334 | 474 | 4.34e-70 | 237 |
| Msa0167800 | A0A072VLM7 | 88.421 | 285 | 9 | 3 | 1 | 261 | 1 | 285 | 8.89e-169 | 489 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000610 | Msa0167800 | 0.810060 | 1.390849e-50 | -8.615850e-47 |
| Msa0011060 | Msa0167800 | 0.806178 | 9.332318e-50 | -8.615850e-47 |
| Msa0011100 | Msa0167800 | 0.800045 | 1.732451e-48 | -8.615850e-47 |
| Msa0025060 | Msa0167800 | 0.872822 | 2.366267e-67 | -8.615850e-47 |
| Msa0025090 | Msa0167800 | 0.876290 | 1.570060e-68 | -8.615850e-47 |
| Msa0027610 | Msa0167800 | 0.953455 | 2.641503e-111 | -8.615850e-47 |
| Msa0030760 | Msa0167800 | 0.801915 | 7.187965e-49 | -8.615850e-47 |
| Msa0036560 | Msa0167800 | 0.814139 | 1.793480e-51 | -8.615850e-47 |
| Msa0042500 | Msa0167800 | 0.820403 | 6.987004e-53 | -8.615850e-47 |
| Msa0048410 | Msa0167800 | 0.805970 | 1.032009e-49 | -8.615850e-47 |
| Msa0049670 | Msa0167800 | 0.832640 | 8.421228e-56 | -8.615850e-47 |
| Msa0071640 | Msa0167800 | -0.807132 | 5.870034e-50 | -8.615850e-47 |
| Msa0072590 | Msa0167800 | 0.862421 | 5.130461e-64 | -8.615850e-47 |
| Msa0074310 | Msa0167800 | 0.809659 | 1.696538e-50 | -8.615850e-47 |
| Msa0075370 | Msa0167800 | 0.945115 | 5.578386e-104 | -8.615850e-47 |
| Msa0079320 | Msa0167800 | 0.849220 | 3.719440e-60 | -8.615850e-47 |
| Msa0079570 | Msa0167800 | 0.814992 | 1.161539e-51 | -8.615850e-47 |
| Msa0081700 | Msa0167800 | 0.851846 | 6.803465e-61 | -8.615850e-47 |
| Msa0083200 | Msa0167800 | 0.859129 | 5.119621e-63 | -8.615850e-47 |
| Msa0090350 | Msa0167800 | 0.800448 | 1.434576e-48 | -8.615850e-47 |
| Msa0091300 | Msa0167800 | 0.815494 | 8.984640e-52 | -8.615850e-47 |
| Msa0094900 | Msa0167800 | 0.810559 | 1.085159e-50 | -8.615850e-47 |
| Msa0095550 | Msa0167800 | 0.905380 | 4.565688e-80 | -8.615850e-47 |
| Msa0099090 | Msa0167800 | 0.831650 | 1.479732e-55 | -8.615850e-47 |
| Msa0106810 | Msa0167800 | 0.828567 | 8.367019e-55 | -8.615850e-47 |
| Msa0123310 | Msa0167800 | 0.941556 | 3.386478e-101 | -8.615850e-47 |
| Msa0127240 | Msa0167800 | 0.809915 | 1.494538e-50 | -8.615850e-47 |
| Msa0136360 | Msa0167800 | 0.807389 | 5.177615e-50 | -8.615850e-47 |
| Msa0138380 | Msa0167800 | 0.813027 | 3.149880e-51 | -8.615850e-47 |
| Msa0139280 | Msa0167800 | 0.819601 | 1.066117e-52 | -8.615850e-47 |
| Msa0153290 | Msa0167800 | 0.852205 | 5.379206e-61 | -8.615850e-47 |
| Msa0167800 | Msa0172110 | 0.868619 | 5.708181e-66 | -8.615850e-47 |
| Msa0167800 | Msa0172290 | 0.816237 | 6.132228e-52 | -8.615850e-47 |
| Msa0167800 | Msa0174060 | 0.820394 | 7.019655e-53 | -8.615850e-47 |
| Msa0167800 | Msa0175480 | 0.808979 | 2.373257e-50 | -8.615850e-47 |
| Msa0167800 | Msa0183840 | -0.811866 | 5.651649e-51 | -8.615850e-47 |
| Msa0167800 | Msa0186380 | 0.811197 | 7.896202e-51 | -8.615850e-47 |
| Msa0167800 | Msa0192890 | -0.809144 | 2.187598e-50 | -8.615850e-47 |
| Msa0167800 | Msa0195030 | -0.835917 | 1.269396e-56 | -8.615850e-47 |
| Msa0167800 | Msa0198140 | 0.843135 | 1.688099e-58 | -8.615850e-47 |
| Msa0167800 | Msa0198220 | 0.840270 | 9.619610e-58 | -8.615850e-47 |
| Msa0167800 | Msa0218480 | 0.809196 | 2.132469e-50 | -8.615850e-47 |
| Msa0167800 | Msa0218590 | 0.806649 | 7.426033e-50 | -8.615850e-47 |
| Msa0167800 | Msa0226580 | 0.844690 | 6.467995e-59 | -8.615850e-47 |
| Msa0167800 | Msa0227970 | 0.802559 | 5.296186e-49 | -8.615850e-47 |
| Msa0167800 | Msa0228360 | 0.840802 | 6.981477e-58 | -8.615850e-47 |
| Msa0167800 | Msa0237180 | -0.841126 | 5.739593e-58 | -8.615850e-47 |
| Msa0167800 | Msa0240460 | 0.812229 | 4.709767e-51 | -8.615850e-47 |
| Msa0167800 | Msa0249670 | 0.807500 | 4.903367e-50 | -8.615850e-47 |
| Msa0167800 | Msa0258280 | 0.855167 | 7.565577e-62 | -8.615850e-47 |
| Msa0167800 | Msa0264580 | 0.805526 | 1.279247e-49 | -8.615850e-47 |
| Msa0167800 | Msa0266380 | 0.802874 | 4.561026e-49 | -8.615850e-47 |
| Msa0167800 | Msa0274940 | -0.820709 | 5.942005e-53 | -8.615850e-47 |
| Msa0167800 | Msa0278340 | 0.837624 | 4.656531e-57 | -8.615850e-47 |
| Msa0167800 | Msa0281370 | -0.821989 | 3.010176e-53 | -8.615850e-47 |
| Msa0167800 | Msa0297320 | 0.828079 | 1.097193e-54 | -8.615850e-47 |
| Msa0167800 | Msa0304350 | 0.826678 | 2.378470e-54 | -8.615850e-47 |
| Msa0167800 | Msa0305910 | 0.826588 | 2.497855e-54 | -8.615850e-47 |
| Msa0167800 | Msa0307430 | -0.813154 | 2.954321e-51 | -8.615850e-47 |
| Msa0167800 | Msa0315660 | -0.840588 | 7.945334e-58 | -8.615850e-47 |
| Msa0167800 | Msa0328790 | 0.801923 | 7.159326e-49 | -8.615850e-47 |
| Msa0167800 | Msa0339970 | 0.805488 | 1.302834e-49 | -8.615850e-47 |
| Msa0167800 | Msa0340830 | 0.819300 | 1.248501e-52 | -8.615850e-47 |
| Msa0167800 | Msa0340870 | 0.817519 | 3.161675e-52 | -8.615850e-47 |
| Msa0167800 | Msa0341860 | 0.801162 | 1.025540e-48 | -8.615850e-47 |
| Msa0167800 | Msa0362440 | 0.825405 | 4.772992e-54 | -8.615850e-47 |
| Msa0167800 | Msa0370350 | 0.891198 | 4.942901e-74 | -8.615850e-47 |
| Msa0167800 | Msa0378620 | 0.834145 | 3.550132e-56 | -8.615850e-47 |
| Msa0167800 | Msa0378920 | 0.805433 | 1.338100e-49 | -8.615850e-47 |
| Msa0167800 | Msa0379350 | 0.808232 | 3.427029e-50 | -8.615850e-47 |
| Msa0167800 | Msa0384130 | 0.846577 | 1.990914e-59 | -8.615850e-47 |
| Msa0167800 | Msa0384330 | 0.823533 | 1.315827e-53 | -8.615850e-47 |
| Msa0167800 | Msa0385870 | 0.804718 | 1.888491e-49 | -8.615850e-47 |
| Msa0167800 | Msa0412480 | 0.822089 | 2.854338e-53 | -8.615850e-47 |
| Msa0167800 | Msa0415910 | 0.813879 | 2.046423e-51 | -8.615850e-47 |
| Msa0167800 | Msa0416470 | -0.807461 | 4.999012e-50 | -8.615850e-47 |
| Msa0167800 | Msa0417850 | 0.874157 | 8.407076e-68 | -8.615850e-47 |
| Msa0167800 | Msa0426990 | 0.810929 | 9.028729e-51 | -8.615850e-47 |
| Msa0167800 | Msa0427890 | 0.802102 | 6.577544e-49 | -8.615850e-47 |
| Msa0167800 | Msa0432260 | 0.833135 | 6.346388e-56 | -8.615850e-47 |
| Msa0167800 | Msa0434840 | 0.846252 | 2.440278e-59 | -8.615850e-47 |
| Msa0167800 | Msa0451370 | 0.806605 | 7.583882e-50 | -8.615850e-47 |
| Msa0167800 | Msa0476730 | 0.821071 | 4.905261e-53 | -8.615850e-47 |
| Msa0167800 | Msa0478660 | 0.825615 | 4.256633e-54 | -8.615850e-47 |
| Msa0167800 | Msa0478750 | 0.850939 | 1.227885e-60 | -8.615850e-47 |
| Msa0167800 | Msa0480940 | -0.801505 | 8.725376e-49 | -8.615850e-47 |
| Msa0167800 | Msa0483090 | 0.814496 | 1.495662e-51 | -8.615850e-47 |
| Msa0167800 | Msa0483160 | 0.853921 | 1.735295e-61 | -8.615850e-47 |
| Msa0167800 | Msa0486850 | 0.814881 | 1.228896e-51 | -8.615850e-47 |
| Msa0167800 | Msa0502900 | 0.803202 | 3.901179e-49 | -8.615850e-47 |
| Msa0167800 | Msa0521100 | 0.805565 | 1.255317e-49 | -8.615850e-47 |
| Msa0167800 | Msa0522730 | 0.819727 | 9.977058e-53 | -8.615850e-47 |
| Msa0167800 | Msa0522830 | 0.859813 | 3.190555e-63 | -8.615850e-47 |
| Msa0167800 | Msa0523400 | 0.812608 | 3.891180e-51 | -8.615850e-47 |
| Msa0167800 | Msa0526490 | 0.834809 | 2.417312e-56 | -8.615850e-47 |
| Msa0167800 | Msa0526500 | 0.805908 | 1.063447e-49 | -8.615850e-47 |
| Msa0167800 | Msa0538050 | 0.803835 | 2.883653e-49 | -8.615850e-47 |
| Msa0167800 | Msa0540120 | 0.818688 | 1.720297e-52 | -8.615850e-47 |
| Msa0167800 | Msa0540160 | 0.846187 | 2.542718e-59 | -8.615850e-47 |
| Msa0167800 | Msa0545750 | 0.801972 | 6.997812e-49 | -8.615850e-47 |
| Msa0167800 | Msa0549550 | 0.818172 | 2.251477e-52 | -8.615850e-47 |
| Msa0167800 | Msa0553940 | 0.814842 | 1.253997e-51 | -8.615850e-47 |
| Msa0167800 | Msa0555510 | 0.812839 | 3.463955e-51 | -8.615850e-47 |
| Msa0167800 | Msa0559270 | 0.802447 | 5.586505e-49 | -8.615850e-47 |
| Msa0167800 | Msa0559440 | 0.838465 | 2.829421e-57 | -8.615850e-47 |
| Msa0167800 | Msa0559640 | 0.830508 | 2.823260e-55 | -8.615850e-47 |
| Msa0167800 | Msa0564000 | 0.830056 | 3.641393e-55 | -8.615850e-47 |
| Msa0167800 | Msa0577290 | 0.813038 | 3.132495e-51 | -8.615850e-47 |
| Msa0167800 | Msa0577960 | 0.831552 | 1.564663e-55 | -8.615850e-47 |
| Msa0167800 | Msa0601470 | 0.805348 | 1.393967e-49 | -8.615850e-47 |
| Msa0167800 | Msa0604890 | 0.829459 | 5.087684e-55 | -8.615850e-47 |
| Msa0167800 | Msa0617470 | 0.811239 | 7.733778e-51 | -8.615850e-47 |
| Msa0167800 | Msa0619300 | -0.810145 | 1.332916e-50 | -8.615850e-47 |
| Msa0167800 | Msa0622930 | 0.815109 | 1.093876e-51 | -8.615850e-47 |
| Msa0167800 | Msa0623360 | 0.801675 | 8.051437e-49 | -8.615850e-47 |
| Msa0167800 | Msa0625550 | 0.833461 | 5.261838e-56 | -8.615850e-47 |
| Msa0167800 | Msa0635070 | 0.827239 | 1.746109e-54 | -8.615850e-47 |
| Msa0167800 | Msa0646180 | 0.846606 | 1.954341e-59 | -8.615850e-47 |
| Msa0167800 | Msa0648410 | 0.807287 | 5.442262e-50 | -8.615850e-47 |
| Msa0167800 | Msa0649530 | 0.820834 | 5.561989e-53 | -8.615850e-47 |
| Msa0167800 | Msa0654400 | 0.801328 | 9.481977e-49 | -8.615850e-47 |
| Msa0167800 | Msa0654500 | 0.806171 | 9.365499e-50 | -8.615850e-47 |
| Msa0167800 | Msa0654570 | 0.803969 | 2.704995e-49 | -8.615850e-47 |
| Msa0167800 | Msa0665010 | 0.807400 | 5.149001e-50 | -8.615850e-47 |
| Msa0167800 | Msa0674680 | 0.814296 | 1.656390e-51 | -8.615850e-47 |
| Msa0167800 | Msa0680550 | 0.801286 | 9.671344e-49 | -8.615850e-47 |
| Msa0167800 | Msa0690920 | 0.825697 | 4.070278e-54 | -8.615850e-47 |
| Msa0167800 | Msa0691740 | 0.814409 | 1.563426e-51 | -8.615850e-47 |
| Msa0167800 | Msa0700250 | 0.812825 | 3.488272e-51 | -8.615850e-47 |
| Msa0167800 | Msa0700430 | 0.816045 | 6.771650e-52 | -8.615850e-47 |
| Msa0167800 | Msa0704690 | -0.810925 | 9.045775e-51 | -8.615850e-47 |
| Msa0167800 | Msa0714060 | 0.802651 | 5.070729e-49 | -8.615850e-47 |
| Msa0167800 | Msa0721650 | 0.812046 | 5.162827e-51 | -8.615850e-47 |
| Msa0167800 | Msa0722660 | 0.862313 | 5.535701e-64 | -8.615850e-47 |
| Msa0167800 | Msa0741600 | 0.831475 | 1.634794e-55 | -8.615850e-47 |
| Msa0167800 | Msa0742690 | 0.832604 | 8.598997e-56 | -8.615850e-47 |
| Msa0167800 | Msa0779830 | 0.855761 | 5.078634e-62 | -8.615850e-47 |
| Msa0167800 | Msa0783680 | -0.813741 | 2.195610e-51 | -8.615850e-47 |
| Msa0167800 | Msa0827560 | 0.837076 | 6.435124e-57 | -8.615850e-47 |
| Msa0167800 | Msa0831460 | 0.816657 | 4.940611e-52 | -8.615850e-47 |
| Msa0167800 | Msa0834220 | -0.808169 | 3.533643e-50 | -8.615850e-47 |
| Msa0167800 | Msa0862750 | 0.831213 | 1.896225e-55 | -8.615850e-47 |
| Msa0167800 | Msa0870220 | 0.822659 | 2.105065e-53 | -8.615850e-47 |
| Msa0167800 | Msa0898090 | 0.801500 | 8.744460e-49 | -8.615850e-47 |
| Msa0167800 | Msa0903460 | 0.821889 | 3.175362e-53 | -8.615850e-47 |
| Msa0167800 | Msa0906100 | 0.830468 | 2.887299e-55 | -8.615850e-47 |
| Msa0167800 | Msa0934290 | 0.804889 | 1.738964e-49 | -8.615850e-47 |
| Msa0167800 | Msa0935930 | 0.820951 | 5.229476e-53 | -8.615850e-47 |
| Msa0167800 | Msa0948170 | 0.810050 | 1.397280e-50 | -8.615850e-47 |
| Msa0167800 | Msa0967250 | 0.814990 | 1.162361e-51 | -8.615850e-47 |
| Msa0167800 | Msa0972930 | 0.825445 | 4.669467e-54 | -8.615850e-47 |
| Msa0167800 | Msa0982230 | 0.809948 | 1.469881e-50 | -8.615850e-47 |
| Msa0167800 | Msa1029570 | 0.804314 | 2.292277e-49 | -8.615850e-47 |
| Msa0167800 | Msa1039150 | 0.812526 | 4.055131e-51 | -8.615850e-47 |
| Msa0167800 | Msa1042420 | 0.807432 | 5.070335e-50 | -8.615850e-47 |
| Msa0167800 | Msa1078210 | 0.811699 | 6.143320e-51 | -8.615850e-47 |
| Msa0167800 | Msa1078280 | 0.821497 | 3.912929e-53 | -8.615850e-47 |
| Msa0167800 | Msa1083660 | 0.803718 | 3.049970e-49 | -8.615850e-47 |
| Msa0167800 | Msa1090020 | 0.826424 | 2.733206e-54 | -8.615850e-47 |
| Msa0167800 | Msa1098570 | 0.837634 | 4.628963e-57 | -8.615850e-47 |
| Msa0167800 | Msa1112230 | 0.800019 | 1.753973e-48 | -8.615850e-47 |
| Msa0167800 | Msa1113780 | 0.805242 | 1.466974e-49 | -8.615850e-47 |
| Msa0167800 | Msa1123440 | 0.812182 | 4.821561e-51 | -8.615850e-47 |
| Msa0167800 | Msa1129470 | 0.802778 | 4.773057e-49 | -8.615850e-47 |
| Msa0167800 | Msa1136880 | -0.807974 | 3.888999e-50 | -8.615850e-47 |
| Msa0167800 | Msa1138730 | 0.868254 | 7.485470e-66 | -8.615850e-47 |
| Msa0167800 | Msa1147600 | 0.800936 | 1.140811e-48 | -8.615850e-47 |
| Msa0167800 | Msa1155380 | 0.813875 | 2.050973e-51 | -8.615850e-47 |
| Msa0167800 | Msa1160470 | 0.801424 | 9.064042e-49 | -8.615850e-47 |
| Msa0167800 | Msa1164830 | 0.815591 | 8.547245e-52 | -8.615850e-47 |
| Msa0167800 | Msa1169780 | 0.841171 | 5.586390e-58 | -8.615850e-47 |
| Msa0167800 | Msa1181370 | 0.808725 | 2.688802e-50 | -8.615850e-47 |
| Msa0167800 | Msa1186010 | 0.843124 | 1.699547e-58 | -8.615850e-47 |
| Msa0167800 | Msa1203090 | 0.824890 | 6.316673e-54 | -8.615850e-47 |
| Msa0167800 | Msa1203210 | 0.837972 | 3.790999e-57 | -8.615850e-47 |
| Msa0167800 | Msa1215660 | 0.843038 | 1.791328e-58 | -8.615850e-47 |
| Msa0167800 | Msa1235950 | -0.801356 | 9.359867e-49 | -8.615850e-47 |
| Msa0167800 | Msa1235960 | 0.800040 | 1.736753e-48 | -8.615850e-47 |
| Msa0167800 | Msa1235980 | -0.801160 | 1.026301e-48 | -8.615850e-47 |
| Msa0167800 | Msa1235990 | 0.806836 | 6.779476e-50 | -8.615850e-47 |
| Msa0167800 | Msa1240240 | 0.826302 | 2.922385e-54 | -8.615850e-47 |
| Msa0167800 | Msa1255500 | 0.819279 | 1.262198e-52 | -8.615850e-47 |
| Msa0167800 | Msa1258600 | -0.802482 | 5.494339e-49 | -8.615850e-47 |
| Msa0167800 | Msa1263610 | 0.806275 | 8.901727e-50 | -8.615850e-47 |
| Msa0167800 | Msa1295840 | 0.851551 | 8.242654e-61 | -8.615850e-47 |
| Msa0167800 | Msa1301410 | 0.809509 | 1.827256e-50 | -8.615850e-47 |
| Msa0167800 | Msa1307110 | 0.816296 | 5.950637e-52 | -8.615850e-47 |
| Msa0167800 | Msa1316090 | 0.805056 | 1.604519e-49 | -8.615850e-47 |
| Msa0167800 | Msa1320660 | 0.812766 | 3.594084e-51 | -8.615850e-47 |
| Msa0167800 | Msa1332340 | 0.815674 | 8.190055e-52 | -8.615850e-47 |
| Msa0167800 | Msa1336350 | 0.814311 | 1.643687e-51 | -8.615850e-47 |
| Msa0167800 | Msa1359880 | 0.845728 | 3.388085e-59 | -8.615850e-47 |
| Msa0167800 | Msa1363270 | 0.811863 | 5.658801e-51 | -8.615850e-47 |
| Msa0167800 | Msa1363280 | 0.806126 | 9.568034e-50 | -8.615850e-47 |
| Msa0167800 | Msa1374210 | 0.839026 | 2.025971e-57 | -8.615850e-47 |
| Msa0167800 | Msa1381300 | 0.813070 | 3.083140e-51 | -8.615850e-47 |
| Msa0167800 | Msa1381870 | 0.817973 | 2.497612e-52 | -8.615850e-47 |
| Msa0167800 | Msa1389990 | 0.802369 | 5.796019e-49 | -8.615850e-47 |
| Msa0167800 | Msa1392570 | 0.807574 | 4.729323e-50 | -8.615850e-47 |
| Msa0167800 | Msa1395700 | 0.826217 | 3.063005e-54 | -8.615850e-47 |
| Msa0167800 | Msa1398310 | 0.880144 | 6.992382e-70 | -8.615850e-47 |
| Msa0167800 | Msa1400940 | -0.800208 | 1.605104e-48 | -8.615850e-47 |
| Msa0167800 | Msa1412800 | 0.803426 | 3.505198e-49 | -8.615850e-47 |
| Msa0167800 | Msa1414560 | 0.823207 | 1.568596e-53 | -8.615850e-47 |
| Msa0167800 | Msa1421520 | 0.807682 | 4.487084e-50 | -8.615850e-47 |
| Msa0167800 | Msa1426690 | 0.852531 | 4.342183e-61 | -8.615850e-47 |
| Msa0167800 | Msa1433060 | 0.850531 | 1.598697e-60 | -8.615850e-47 |
| Msa0167800 | Msa1448410 | 0.802455 | 5.563821e-49 | -8.615850e-47 |
| Msa0167800 | Msa1448840 | 0.820370 | 7.109042e-53 | -8.615850e-47 |
| Msa0167800 | Msa1454940 | 0.801376 | 9.273066e-49 | -8.615850e-47 |
| Msa0167800 | Msa1465700 | -0.828306 | 9.673404e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0167800 | MtrunA17_Chr1g0183881 | 88.421 | 285 | 9 | 3 | 1 | 261 | 1 | 285 | 1.71e-172 | 489 |
| Msa0167800 | MtrunA17_Chr1g0183881 | 84.397 | 141 | 7 | 1 | 255 | 380 | 334 | 474 | 8.37e-74 | 237 |
| Msa0167800 | MtrunA17_Chr2g0293201 | 32.840 | 405 | 156 | 11 | 86 | 374 | 64 | 468 | 3.14e-56 | 191 |
| Msa0167800 | MtrunA17_Chr8g0385291 | 33.523 | 352 | 133 | 10 | 115 | 373 | 158 | 501 | 8.33e-48 | 169 |
| Msa0167800 | MtrunA17_Chr4g0014901 | 31.034 | 377 | 149 | 15 | 96 | 369 | 222 | 590 | 4.77e-43 | 158 |
| Msa0167800 | MtrunA17_Chr3g0131071 | 27.193 | 456 | 225 | 13 | 3 | 357 | 106 | 555 | 2.01e-36 | 139 |
| Msa0167800 | MtrunA17_Chr4g0004981 | 27.193 | 342 | 151 | 12 | 124 | 370 | 107 | 445 | 1.76e-29 | 118 |
| Msa0167800 | MtrunA17_Chr4g0014911 | 30.233 | 344 | 141 | 11 | 123 | 370 | 121 | 461 | 2.27e-26 | 109 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0167800 | AT1G30690.1 | 32.938 | 337 | 135 | 11 | 123 | 370 | 201 | 535 | 3.19e-45 | 163 |
| Msa0167800 | AT1G30690.2 | 32.938 | 337 | 135 | 11 | 123 | 370 | 201 | 535 | 3.19e-45 | 163 |
| Msa0167800 | AT4G09160.1 | 32.174 | 345 | 127 | 10 | 126 | 370 | 326 | 663 | 8.77e-41 | 152 |
| Msa0167800 | AT4G09160.2 | 32.174 | 345 | 127 | 10 | 126 | 370 | 301 | 638 | 9.74e-41 | 152 |
| Msa0167800 | AT4G09160.3 | 32.174 | 345 | 127 | 10 | 126 | 370 | 301 | 638 | 1.22e-40 | 152 |
| Msa0167800 | AT1G72160.1 | 30.053 | 376 | 153 | 10 | 86 | 366 | 124 | 484 | 2.55e-37 | 141 |
| Msa0167800 | AT1G22530.2 | 27.809 | 356 | 149 | 13 | 115 | 371 | 303 | 649 | 2.15e-29 | 120 |
| Msa0167800 | AT1G22530.1 | 27.809 | 356 | 149 | 13 | 115 | 371 | 337 | 683 | 2.71e-29 | 120 |
| Msa0167800 | AT1G72150.1 | 26.100 | 341 | 146 | 12 | 126 | 370 | 243 | 573 | 2.96e-22 | 99.0 |
| Msa0167800 | AT3G51670.1 | 36.612 | 183 | 83 | 6 | 79 | 245 | 42 | 207 | 5.05e-21 | 94.4 |
Find 64 sgRNAs with CRISPR-Local
Find 276 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAATTCAAGAAGCAATTAT+TGG | 0.227229 | 1_4:+49830238 | Msa0167800:CDS |
| TTGTTAGGTGAAGGAGAAAA+AGG | 0.245387 | 1_4:+49830268 | Msa0167800:CDS |
| ATCTTAGAGATATTACATTA+TGG | 0.248604 | 1_4:+49830317 | Msa0167800:CDS |
| TAAAATTCTTGATGAAGATT+TGG | 0.250588 | 1_4:+49830483 | Msa0167800:CDS |
| TGGTGTTGATGGAATTATTC+AGG | 0.274026 | 1_4:+49830702 | Msa0167800:CDS |
| ATAGTAATAACAGTTGAAAA+TGG | 0.282119 | 1_4:+49831949 | Msa0167800:CDS |
| AGCTCTTTCATTCCTTGAAT+TGG | 0.286220 | 1_4:-49830745 | None:intergenic |
| TTCTGGCAAATTCTCGTTGC+CGG | 0.319245 | 1_4:+49829952 | Msa0167800:CDS |
| ATTATTGGAAAATATTTGTT+AGG | 0.321956 | 1_4:+49830253 | Msa0167800:CDS |
| AAAATTCTTGATGAAGATTT+GGG | 0.329182 | 1_4:+49830484 | Msa0167800:CDS |
| GCTCAACTCCGTCAGCAAAA+AGG | 0.352272 | 1_4:+49830765 | Msa0167800:CDS |
| TTGTATGAACATTCATCATT+TGG | 0.366571 | 1_4:-49831853 | None:intergenic |
| ACGAGAATTTGCCAGAAAAC+TGG | 0.369041 | 1_4:-49829946 | None:intergenic |
| TCTTAGAGATATTACATTAT+GGG | 0.371202 | 1_4:+49830318 | Msa0167800:CDS |
| TGTGCCCTACTTGGTAATAA+AGG | 0.371867 | 1_4:-49830346 | None:intergenic |
| GAGATGGAGGATTCAATTGA+TGG | 0.376525 | 1_4:+49830648 | Msa0167800:CDS |
| AATTTGTACAAGAAGACATT+TGG | 0.376644 | 1_4:+49830598 | Msa0167800:CDS |
| GAGCATCTTCCAGCTGGATA+TGG | 0.380972 | 1_4:+49831170 | Msa0167800:CDS |
| AGCCTAATCTCTGCAGGACT+TGG | 0.407088 | 1_4:-49830181 | None:intergenic |
| CAGCTGGATATGGTGGTCTA+AGG | 0.408968 | 1_4:+49831180 | Msa0167800:CDS |
| TATCCAGCTGGAAGATGCTC+TGG | 0.411235 | 1_4:-49831167 | None:intergenic |
| CTACAAAACCAAAGTGTTGT+TGG | 0.411528 | 1_4:+49831883 | Msa0167800:CDS |
| TTGAAAAGTGCACCAATTCA+AGG | 0.425968 | 1_4:+49830733 | Msa0167800:CDS |
| CAAGAGAAAGAAATCATTGT+TGG | 0.439581 | 1_4:+49830204 | Msa0167800:CDS |
| TAGTAATAACAGTTGAAAAT+GGG | 0.440697 | 1_4:+49831950 | Msa0167800:CDS |
| TGTTACAGAAGACATTGGTT+TGG | 0.442089 | 1_4:+49830440 | Msa0167800:CDS |
| TGCTCTAAAACTTTATCATC+AGG | 0.448465 | 1_4:-49831227 | None:intergenic |
| CTCTTGAGCCTAATCTCTGC+AGG | 0.448756 | 1_4:-49830187 | None:intergenic |
| GGAAAATATTTGTTAGGTGA+AGG | 0.449552 | 1_4:+49830259 | Msa0167800:CDS |
| CGTTGCCGGAAAATCCGATC+AGG | 0.466677 | 1_4:+49829966 | Msa0167800:CDS |
| GGCCCAGAGCATCTTCCAGC+TGG | 0.482220 | 1_4:+49831164 | Msa0167800:CDS |
| TAGTGATGTGGAACGAGAAT+TGG | 0.486000 | 1_4:+49830135 | Msa0167800:CDS |
| CTCATGGCCTCTTCCCTGAT+CGG | 0.487905 | 1_4:-49829980 | None:intergenic |
| GTACCTTCATGTGCCCTACT+TGG | 0.493972 | 1_4:-49830355 | None:intergenic |
| ATATTTGGATAGTAGAGATA+AGG | 0.496144 | 1_4:+49830528 | Msa0167800:CDS |
| ACTGTTATTACTATCTTCCC+TGG | 0.497920 | 1_4:-49831940 | None:intergenic |
| TTGTTGAGCACCTCATTGAC+TGG | 0.499653 | 1_4:-49831287 | None:intergenic |
| GTGTTCCTTTATTACCAAGT+AGG | 0.502140 | 1_4:+49830341 | Msa0167800:CDS |
| TGCTGTCACCAACAACACTT+TGG | 0.503098 | 1_4:-49831891 | None:intergenic |
| TGTTCCTTTATTACCAAGTA+GGG | 0.503280 | 1_4:+49830342 | Msa0167800:CDS |
| CACCAAGTCCTGCAGAGATT+AGG | 0.512586 | 1_4:+49830179 | Msa0167800:CDS |
| TATGATAGCAAAATGAACAT+TGG | 0.514104 | 1_4:-49832024 | None:intergenic |
| ATGAAATGTCACAGGTACAT+AGG | 0.530202 | 1_4:+49831143 | Msa0167800:intron |
| GGAAAATCCGATCAGGGAAG+AGG | 0.541733 | 1_4:+49829973 | Msa0167800:CDS |
| CTTAGAGATATTACATTATG+GGG | 0.542377 | 1_4:+49830319 | Msa0167800:CDS |
| ATGTTCATCATTGCATTCAT+CGG | 0.544558 | 1_4:-49830008 | None:intergenic |
| GCATTCATCGGTATCACTCA+TGG | 0.553380 | 1_4:-49829996 | None:intergenic |
| TAGAGATAAGGAAGGTCGAC+CGG | 0.565192 | 1_4:+49830540 | Msa0167800:CDS |
| CTTAGACCACCATATCCAGC+TGG | 0.567452 | 1_4:-49831179 | None:intergenic |
| CATCTTCCAGCTGGATATGG+TGG | 0.574311 | 1_4:+49831173 | Msa0167800:CDS |
| ATCCAGCTGGAAGATGCTCT+GGG | 0.577545 | 1_4:-49831166 | None:intergenic |
| AATGAGGACGAAGATGATCA+TGG | 0.585537 | 1_4:+49830088 | Msa0167800:CDS |
| TGACATGTTACAGAAGACAT+TGG | 0.594854 | 1_4:+49830435 | Msa0167800:CDS |
| CTGGATATGGTGGTCTAAGG+AGG | 0.598272 | 1_4:+49831183 | Msa0167800:CDS |
| TGGATGGGAGGTGATTTACA+AGG | 0.598715 | 1_4:+49831819 | Msa0167800:intron |
| TTTGCCAGAAAACTGGAGCA+TGG | 0.611039 | 1_4:-49829939 | None:intergenic |
| AGTTGAATTTCCAGTCAATG+AGG | 0.619748 | 1_4:+49831277 | Msa0167800:CDS |
| TTGGATAGTAGAGATAAGGA+AGG | 0.628322 | 1_4:+49830532 | Msa0167800:CDS |
| TTACCAAGTAGGGCACATGA+AGG | 0.629064 | 1_4:+49830352 | Msa0167800:CDS |
| TCATGATCTTGTTAGTGATG+TGG | 0.637441 | 1_4:+49830123 | Msa0167800:CDS |
| TCAAATAAGACTTATCAATG+AGG | 0.649999 | 1_4:+49830072 | Msa0167800:CDS |
| GTTGCCGGAAAATCCGATCA+GGG | 0.653037 | 1_4:+49829967 | Msa0167800:CDS |
| GATGAATGCAATGATGAACA+TGG | 0.677939 | 1_4:+49830010 | Msa0167800:CDS |
| ATGAATGCAATGATGAACAT+GGG | 0.696221 | 1_4:+49830011 | Msa0167800:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATTGGAAAATATTTGTT+AGG | + | chr1_4:49830253-49830272 | Msa0167800:CDS | 15.0% |
| !!! | TGAATTTTATGTTATACTTA+AGG | - | chr1_4:49831081-49831100 | None:intergenic | 15.0% |
| !! | AATAGAGTAAATATCTAAAT+TGG | - | chr1_4:49831710-49831729 | None:intergenic | 15.0% |
| !! | AAAGAAATAAATTAGAACAA+AGG | - | chr1_4:49831753-49831772 | None:intergenic | 15.0% |
| !! | ATTATTGGAAAATATTTGTT+AGG | + | chr1_4:49830253-49830272 | Msa0167800:CDS | 15.0% |
| !!! | TGAATTTTATGTTATACTTA+AGG | - | chr1_4:49831081-49831100 | None:intergenic | 15.0% |
| !! | AATAGAGTAAATATCTAAAT+TGG | - | chr1_4:49831710-49831729 | None:intergenic | 15.0% |
| !! | AAAGAAATAAATTAGAACAA+AGG | - | chr1_4:49831753-49831772 | None:intergenic | 15.0% |
| !!! | GATTTTCATTGAAATCTAAA+TGG | - | chr1_4:49830054-49830073 | None:intergenic | 20.0% |
| !! | AAAATTCAAGAAGCAATTAT+TGG | + | chr1_4:49830238-49830257 | Msa0167800:CDS | 20.0% |
| !! | ATCTTAGAGATATTACATTA+TGG | + | chr1_4:49830317-49830336 | Msa0167800:CDS | 20.0% |
| !! | TCTTAGAGATATTACATTAT+GGG | + | chr1_4:49830318-49830337 | Msa0167800:CDS | 20.0% |
| !! | TAAAATTCTTGATGAAGATT+TGG | + | chr1_4:49830483-49830502 | Msa0167800:CDS | 20.0% |
| !! | AAAATTCTTGATGAAGATTT+GGG | + | chr1_4:49830484-49830503 | Msa0167800:CDS | 20.0% |
| !!! | TTTTGAAAAAGTTGGATATT+TGG | + | chr1_4:49830513-49830532 | Msa0167800:CDS | 20.0% |
| !!! | ACATTTTTATAAACTATCTC+CGG | - | chr1_4:49830817-49830836 | None:intergenic | 20.0% |
| !!! | TTTTGTGTAAATATCAAATC+CGG | + | chr1_4:49831377-49831396 | Msa0167800:intron | 20.0% |
| !! | ATCATTGATATTATTCACTT+AGG | + | chr1_4:49831521-49831540 | Msa0167800:intron | 20.0% |
| !!! | AAATTGGTCTTTGAAATTAT+AGG | - | chr1_4:49831694-49831713 | None:intergenic | 20.0% |
| !! | ATAGTAATAACAGTTGAAAA+TGG | + | chr1_4:49831949-49831968 | Msa0167800:CDS | 20.0% |
| !! | TAGTAATAACAGTTGAAAAT+GGG | + | chr1_4:49831950-49831969 | Msa0167800:CDS | 20.0% |
| !!! | GATTTTCATTGAAATCTAAA+TGG | - | chr1_4:49830054-49830073 | None:intergenic | 20.0% |
| !! | AAAATTCAAGAAGCAATTAT+TGG | + | chr1_4:49830238-49830257 | Msa0167800:CDS | 20.0% |
| !! | ATCTTAGAGATATTACATTA+TGG | + | chr1_4:49830317-49830336 | Msa0167800:CDS | 20.0% |
| !! | TCTTAGAGATATTACATTAT+GGG | + | chr1_4:49830318-49830337 | Msa0167800:CDS | 20.0% |
| !! | TAAAATTCTTGATGAAGATT+TGG | + | chr1_4:49830483-49830502 | Msa0167800:CDS | 20.0% |
| !! | AAAATTCTTGATGAAGATTT+GGG | + | chr1_4:49830484-49830503 | Msa0167800:CDS | 20.0% |
| !!! | TTTTGAAAAAGTTGGATATT+TGG | + | chr1_4:49830513-49830532 | Msa0167800:CDS | 20.0% |
| !!! | ACATTTTTATAAACTATCTC+CGG | - | chr1_4:49830817-49830836 | None:intergenic | 20.0% |
| !!! | TTTTGTGTAAATATCAAATC+CGG | + | chr1_4:49831377-49831396 | Msa0167800:intron | 20.0% |
| !! | ATCATTGATATTATTCACTT+AGG | + | chr1_4:49831521-49831540 | Msa0167800:intron | 20.0% |
| !!! | AAATTGGTCTTTGAAATTAT+AGG | - | chr1_4:49831694-49831713 | None:intergenic | 20.0% |
| !! | ATAGTAATAACAGTTGAAAA+TGG | + | chr1_4:49831949-49831968 | Msa0167800:CDS | 20.0% |
| !! | TAGTAATAACAGTTGAAAAT+GGG | + | chr1_4:49831950-49831969 | Msa0167800:CDS | 20.0% |
| ! | TCAAATAAGACTTATCAATG+AGG | + | chr1_4:49830072-49830091 | Msa0167800:CDS | 25.0% |
| ! | AGAAAAAATTTCATTGCCAA+AGG | + | chr1_4:49830291-49830310 | Msa0167800:CDS | 25.0% |
| !!! | ATATCTCTAAGATTTTCCTT+TGG | - | chr1_4:49830310-49830329 | None:intergenic | 25.0% |
| ! | CTTAGAGATATTACATTATG+GGG | + | chr1_4:49830319-49830338 | Msa0167800:CDS | 25.0% |
| ! | TGTATTGAGGAAATTCTTAA+AGG | + | chr1_4:49830384-49830403 | Msa0167800:intron | 25.0% |
| ! | ATATTTGGATAGTAGAGATA+AGG | + | chr1_4:49830528-49830547 | Msa0167800:CDS | 25.0% |
| ! | AATTTGTACAAGAAGACATT+TGG | + | chr1_4:49830598-49830617 | Msa0167800:CDS | 25.0% |
| !!! | ATTAAGAAGTTGAGTTTTAG+AGG | + | chr1_4:49830679-49830698 | Msa0167800:CDS | 25.0% |
| !! | CATTTTTATAAACTATCTCC+GGG | - | chr1_4:49830816-49830835 | None:intergenic | 25.0% |
| ! | ACTTATTTGAGCTTATCTAT+TGG | + | chr1_4:49830854-49830873 | Msa0167800:intron | 25.0% |
| ! | TTAACATTATGAAATGTCAC+AGG | + | chr1_4:49831135-49831154 | Msa0167800:intron | 25.0% |
| !! | TTGGAATATTGATAACATGA+GGG | - | chr1_4:49831435-49831454 | None:intergenic | 25.0% |
| !! | TTTGGAATATTGATAACATG+AGG | - | chr1_4:49831436-49831455 | None:intergenic | 25.0% |
| ! | TTGTATGAACATTCATCATT+TGG | - | chr1_4:49831856-49831875 | None:intergenic | 25.0% |
| !! | TCTTTTTACATAAATGAACC+AGG | + | chr1_4:49831922-49831941 | Msa0167800:CDS | 25.0% |
| !! | CTTTTTACATAAATGAACCA+GGG | + | chr1_4:49831923-49831942 | Msa0167800:CDS | 25.0% |
| ! | TATGATAGCAAAATGAACAT+TGG | - | chr1_4:49832027-49832046 | None:intergenic | 25.0% |
| ! | TCAAATAAGACTTATCAATG+AGG | + | chr1_4:49830072-49830091 | Msa0167800:CDS | 25.0% |
| ! | AGAAAAAATTTCATTGCCAA+AGG | + | chr1_4:49830291-49830310 | Msa0167800:CDS | 25.0% |
| !!! | ATATCTCTAAGATTTTCCTT+TGG | - | chr1_4:49830310-49830329 | None:intergenic | 25.0% |
| ! | CTTAGAGATATTACATTATG+GGG | + | chr1_4:49830319-49830338 | Msa0167800:CDS | 25.0% |
| ! | TGTATTGAGGAAATTCTTAA+AGG | + | chr1_4:49830384-49830403 | Msa0167800:intron | 25.0% |
| ! | ATATTTGGATAGTAGAGATA+AGG | + | chr1_4:49830528-49830547 | Msa0167800:CDS | 25.0% |
| ! | AATTTGTACAAGAAGACATT+TGG | + | chr1_4:49830598-49830617 | Msa0167800:CDS | 25.0% |
| !!! | ATTAAGAAGTTGAGTTTTAG+AGG | + | chr1_4:49830679-49830698 | Msa0167800:CDS | 25.0% |
| !! | CATTTTTATAAACTATCTCC+GGG | - | chr1_4:49830816-49830835 | None:intergenic | 25.0% |
| ! | ACTTATTTGAGCTTATCTAT+TGG | + | chr1_4:49830854-49830873 | Msa0167800:intron | 25.0% |
| ! | TTAACATTATGAAATGTCAC+AGG | + | chr1_4:49831135-49831154 | Msa0167800:intron | 25.0% |
| !! | TTGGAATATTGATAACATGA+GGG | - | chr1_4:49831435-49831454 | None:intergenic | 25.0% |
| !! | TTTGGAATATTGATAACATG+AGG | - | chr1_4:49831436-49831455 | None:intergenic | 25.0% |
| ! | TTGTATGAACATTCATCATT+TGG | - | chr1_4:49831856-49831875 | None:intergenic | 25.0% |
| !! | TCTTTTTACATAAATGAACC+AGG | + | chr1_4:49831922-49831941 | Msa0167800:CDS | 25.0% |
| !! | CTTTTTACATAAATGAACCA+GGG | + | chr1_4:49831923-49831942 | Msa0167800:CDS | 25.0% |
| ! | TATGATAGCAAAATGAACAT+TGG | - | chr1_4:49832027-49832046 | None:intergenic | 25.0% |
| ATGTTCATCATTGCATTCAT+CGG | - | chr1_4:49830011-49830030 | None:intergenic | 30.0% | |
| ATGAATGCAATGATGAACAT+GGG | + | chr1_4:49830011-49830030 | Msa0167800:CDS | 30.0% | |
| CAAGAGAAAGAAATCATTGT+TGG | + | chr1_4:49830204-49830223 | Msa0167800:CDS | 30.0% | |
| ! | GGAAAATATTTGTTAGGTGA+AGG | + | chr1_4:49830259-49830278 | Msa0167800:CDS | 30.0% |
| TGTTCCTTTATTACCAAGTA+GGG | + | chr1_4:49830342-49830361 | Msa0167800:CDS | 30.0% | |
| !! | AAGGTACTGATATTGTATTG+AGG | + | chr1_4:49830371-49830390 | Msa0167800:intron | 30.0% |
| CTTAAAGGCTAAAGATTACA+AGG | + | chr1_4:49830399-49830418 | Msa0167800:intron | 30.0% | |
| !! | GGTTCTGATTTTGAAAAAGT+TGG | + | chr1_4:49830505-49830524 | Msa0167800:CDS | 30.0% |
| TCGTAAACATAGTAACAAAC+CGG | - | chr1_4:49830562-49830581 | None:intergenic | 30.0% | |
| !!! | AATGTGACTTGTTTTTGAGA+TGG | + | chr1_4:49830632-49830651 | Msa0167800:CDS | 30.0% |
| ! | TTGTAGTAAATGCACCATTT+TGG | + | chr1_4:49830946-49830965 | Msa0167800:intron | 30.0% |
| !! | TGAACTTCTTTTTGTTTCTC+TGG | - | chr1_4:49831010-49831029 | None:intergenic | 30.0% |
| TATCATCAGGAGAAAAATCT+TGG | - | chr1_4:49831217-49831236 | None:intergenic | 30.0% | |
| !! | TGCTCTAAAACTTTATCATC+AGG | - | chr1_4:49831230-49831249 | None:intergenic | 30.0% |
| GATACAACCCTAAAATTTCA+AGG | - | chr1_4:49831404-49831423 | None:intergenic | 30.0% | |
| ! | TGGAATATTGATAACATGAG+GGG | - | chr1_4:49831434-49831453 | None:intergenic | 30.0% |
| CAATATTCCAAAATGACTCA+TGG | + | chr1_4:49831444-49831463 | Msa0167800:intron | 30.0% | |
| TGTAACAATCTAATCTCTCA+CGG | - | chr1_4:49831669-49831688 | None:intergenic | 30.0% | |
| ACTCTATTTATGAACCATGT+TGG | + | chr1_4:49831722-49831741 | Msa0167800:intron | 30.0% | |
| ATGTTCATCATTGCATTCAT+CGG | - | chr1_4:49830011-49830030 | None:intergenic | 30.0% | |
| ATGAATGCAATGATGAACAT+GGG | + | chr1_4:49830011-49830030 | Msa0167800:CDS | 30.0% | |
| CAAGAGAAAGAAATCATTGT+TGG | + | chr1_4:49830204-49830223 | Msa0167800:CDS | 30.0% | |
| ! | GGAAAATATTTGTTAGGTGA+AGG | + | chr1_4:49830259-49830278 | Msa0167800:CDS | 30.0% |
| TGTTCCTTTATTACCAAGTA+GGG | + | chr1_4:49830342-49830361 | Msa0167800:CDS | 30.0% | |
| !! | AAGGTACTGATATTGTATTG+AGG | + | chr1_4:49830371-49830390 | Msa0167800:intron | 30.0% |
| CTTAAAGGCTAAAGATTACA+AGG | + | chr1_4:49830399-49830418 | Msa0167800:intron | 30.0% | |
| !! | GGTTCTGATTTTGAAAAAGT+TGG | + | chr1_4:49830505-49830524 | Msa0167800:CDS | 30.0% |
| TCGTAAACATAGTAACAAAC+CGG | - | chr1_4:49830562-49830581 | None:intergenic | 30.0% | |
| !!! | AATGTGACTTGTTTTTGAGA+TGG | + | chr1_4:49830632-49830651 | Msa0167800:CDS | 30.0% |
| ! | TTGTAGTAAATGCACCATTT+TGG | + | chr1_4:49830946-49830965 | Msa0167800:intron | 30.0% |
| !! | TGAACTTCTTTTTGTTTCTC+TGG | - | chr1_4:49831010-49831029 | None:intergenic | 30.0% |
| TATCATCAGGAGAAAAATCT+TGG | - | chr1_4:49831217-49831236 | None:intergenic | 30.0% | |
| !! | TGCTCTAAAACTTTATCATC+AGG | - | chr1_4:49831230-49831249 | None:intergenic | 30.0% |
| GATACAACCCTAAAATTTCA+AGG | - | chr1_4:49831404-49831423 | None:intergenic | 30.0% | |
| ! | TGGAATATTGATAACATGAG+GGG | - | chr1_4:49831434-49831453 | None:intergenic | 30.0% |
| CAATATTCCAAAATGACTCA+TGG | + | chr1_4:49831444-49831463 | Msa0167800:intron | 30.0% | |
| TGTAACAATCTAATCTCTCA+CGG | - | chr1_4:49831669-49831688 | None:intergenic | 30.0% | |
| ACTCTATTTATGAACCATGT+TGG | + | chr1_4:49831722-49831741 | Msa0167800:intron | 30.0% | |
| GATGAATGCAATGATGAACA+TGG | + | chr1_4:49830010-49830029 | Msa0167800:CDS | 35.0% | |
| TCATGATCTTGTTAGTGATG+TGG | + | chr1_4:49830123-49830142 | Msa0167800:CDS | 35.0% | |
| !! | AGAATTGGTTGATGATGATG+AGG | + | chr1_4:49830150-49830169 | Msa0167800:intron | 35.0% |
| TTGTTAGGTGAAGGAGAAAA+AGG | + | chr1_4:49830268-49830287 | Msa0167800:CDS | 35.0% | |
| GTGTTCCTTTATTACCAAGT+AGG | + | chr1_4:49830341-49830360 | Msa0167800:CDS | 35.0% | |
| TGACATGTTACAGAAGACAT+TGG | + | chr1_4:49830435-49830454 | Msa0167800:CDS | 35.0% | |
| ! | TGTTACAGAAGACATTGGTT+TGG | + | chr1_4:49830440-49830459 | Msa0167800:CDS | 35.0% |
| TTGGATAGTAGAGATAAGGA+AGG | + | chr1_4:49830532-49830551 | Msa0167800:CDS | 35.0% | |
| !! | GGTTTGTTACTATGTTTACG+AGG | + | chr1_4:49830561-49830580 | Msa0167800:intron | 35.0% |
| !!! | AAGAAGTTGAGTTTTAGAGG+TGG | + | chr1_4:49830682-49830701 | Msa0167800:CDS | 35.0% |
| !! | TGGTGTTGATGGAATTATTC+AGG | + | chr1_4:49830702-49830721 | Msa0167800:CDS | 35.0% |
| ! | TTGAAAAGTGCACCAATTCA+AGG | + | chr1_4:49830733-49830752 | Msa0167800:CDS | 35.0% |
| AGCTCTTTCATTCCTTGAAT+TGG | - | chr1_4:49830748-49830767 | None:intergenic | 35.0% | |
| ! | GTTGTTTCAAAGCTATTACC+CGG | + | chr1_4:49830795-49830814 | Msa0167800:intron | 35.0% |
| ! | CTTCACAAGTGTTATTCTCA+AGG | + | chr1_4:49830976-49830995 | Msa0167800:intron | 35.0% |
| ATGAAATGTCACAGGTACAT+AGG | + | chr1_4:49831143-49831162 | Msa0167800:intron | 35.0% | |
| AGTTGAATTTCCAGTCAATG+AGG | + | chr1_4:49831277-49831296 | Msa0167800:CDS | 35.0% | |
| ! | AATCCGGTCCTTGAAATTTT+AGG | + | chr1_4:49831393-49831412 | Msa0167800:intron | 35.0% |
| ! | ATCCGGTCCTTGAAATTTTA+GGG | + | chr1_4:49831394-49831413 | Msa0167800:intron | 35.0% |
| AACCCTAAAATTTCAAGGAC+CGG | - | chr1_4:49831399-49831418 | None:intergenic | 35.0% | |
| ! | TGCAATTCCATGAGTCATTT+TGG | - | chr1_4:49831454-49831473 | None:intergenic | 35.0% |
| CGATAACAGATTCAGATAGA+GGG | - | chr1_4:49831496-49831515 | None:intergenic | 35.0% | |
| CCTCTATCTGAATCTGTTAT+CGG | + | chr1_4:49831494-49831513 | Msa0167800:intron | 35.0% | |
| CTAGTCCCTACATATATCAA+TGG | + | chr1_4:49831589-49831608 | Msa0167800:intron | 35.0% | |
| TCCCTACATATATCAATGGA+GGG | + | chr1_4:49831593-49831612 | Msa0167800:intron | 35.0% | |
| TCCCTCCATTGATATATGTA+GGG | - | chr1_4:49831597-49831616 | None:intergenic | 35.0% | |
| TTCCCTCCATTGATATATGT+AGG | - | chr1_4:49831598-49831617 | None:intergenic | 35.0% | |
| ! | TGCAATTTCAGAGACCATTT+TGG | + | chr1_4:49831633-49831652 | Msa0167800:intron | 35.0% |
| !! | ACGGTATCGATATTCCAAAA+TGG | - | chr1_4:49831650-49831669 | None:intergenic | 35.0% |
| TTTCTTTGATGTGTCTAGAC+TGG | + | chr1_4:49831766-49831785 | Msa0167800:intron | 35.0% | |
| !! | CTACAAAACCAAAGTGTTGT+TGG | + | chr1_4:49831883-49831902 | Msa0167800:CDS | 35.0% |
| ACTGTTATTACTATCTTCCC+TGG | - | chr1_4:49831943-49831962 | None:intergenic | 35.0% | |
| GATGAATGCAATGATGAACA+TGG | + | chr1_4:49830010-49830029 | Msa0167800:CDS | 35.0% | |
| TCATGATCTTGTTAGTGATG+TGG | + | chr1_4:49830123-49830142 | Msa0167800:CDS | 35.0% | |
| !! | AGAATTGGTTGATGATGATG+AGG | + | chr1_4:49830150-49830169 | Msa0167800:intron | 35.0% |
| TTGTTAGGTGAAGGAGAAAA+AGG | + | chr1_4:49830268-49830287 | Msa0167800:CDS | 35.0% | |
| GTGTTCCTTTATTACCAAGT+AGG | + | chr1_4:49830341-49830360 | Msa0167800:CDS | 35.0% | |
| TGACATGTTACAGAAGACAT+TGG | + | chr1_4:49830435-49830454 | Msa0167800:CDS | 35.0% | |
| ! | TGTTACAGAAGACATTGGTT+TGG | + | chr1_4:49830440-49830459 | Msa0167800:CDS | 35.0% |
| TTGGATAGTAGAGATAAGGA+AGG | + | chr1_4:49830532-49830551 | Msa0167800:CDS | 35.0% | |
| !! | GGTTTGTTACTATGTTTACG+AGG | + | chr1_4:49830561-49830580 | Msa0167800:intron | 35.0% |
| !!! | AAGAAGTTGAGTTTTAGAGG+TGG | + | chr1_4:49830682-49830701 | Msa0167800:CDS | 35.0% |
| !! | TGGTGTTGATGGAATTATTC+AGG | + | chr1_4:49830702-49830721 | Msa0167800:CDS | 35.0% |
| ! | TTGAAAAGTGCACCAATTCA+AGG | + | chr1_4:49830733-49830752 | Msa0167800:CDS | 35.0% |
| AGCTCTTTCATTCCTTGAAT+TGG | - | chr1_4:49830748-49830767 | None:intergenic | 35.0% | |
| ! | GTTGTTTCAAAGCTATTACC+CGG | + | chr1_4:49830795-49830814 | Msa0167800:intron | 35.0% |
| ! | CTTCACAAGTGTTATTCTCA+AGG | + | chr1_4:49830976-49830995 | Msa0167800:intron | 35.0% |
| ATGAAATGTCACAGGTACAT+AGG | + | chr1_4:49831143-49831162 | Msa0167800:intron | 35.0% | |
| AGTTGAATTTCCAGTCAATG+AGG | + | chr1_4:49831277-49831296 | Msa0167800:CDS | 35.0% | |
| ! | AATCCGGTCCTTGAAATTTT+AGG | + | chr1_4:49831393-49831412 | Msa0167800:intron | 35.0% |
| ! | ATCCGGTCCTTGAAATTTTA+GGG | + | chr1_4:49831394-49831413 | Msa0167800:intron | 35.0% |
| AACCCTAAAATTTCAAGGAC+CGG | - | chr1_4:49831399-49831418 | None:intergenic | 35.0% | |
| ! | TGCAATTCCATGAGTCATTT+TGG | - | chr1_4:49831454-49831473 | None:intergenic | 35.0% |
| CGATAACAGATTCAGATAGA+GGG | - | chr1_4:49831496-49831515 | None:intergenic | 35.0% | |
| CCTCTATCTGAATCTGTTAT+CGG | + | chr1_4:49831494-49831513 | Msa0167800:intron | 35.0% | |
| CTAGTCCCTACATATATCAA+TGG | + | chr1_4:49831589-49831608 | Msa0167800:intron | 35.0% | |
| TCCCTACATATATCAATGGA+GGG | + | chr1_4:49831593-49831612 | Msa0167800:intron | 35.0% | |
| TCCCTCCATTGATATATGTA+GGG | - | chr1_4:49831597-49831616 | None:intergenic | 35.0% | |
| TTCCCTCCATTGATATATGT+AGG | - | chr1_4:49831598-49831617 | None:intergenic | 35.0% | |
| ! | TGCAATTTCAGAGACCATTT+TGG | + | chr1_4:49831633-49831652 | Msa0167800:intron | 35.0% |
| !! | ACGGTATCGATATTCCAAAA+TGG | - | chr1_4:49831650-49831669 | None:intergenic | 35.0% |
| TTTCTTTGATGTGTCTAGAC+TGG | + | chr1_4:49831766-49831785 | Msa0167800:intron | 35.0% | |
| !! | CTACAAAACCAAAGTGTTGT+TGG | + | chr1_4:49831883-49831902 | Msa0167800:CDS | 35.0% |
| ACTGTTATTACTATCTTCCC+TGG | - | chr1_4:49831943-49831962 | None:intergenic | 35.0% | |
| ACGAGAATTTGCCAGAAAAC+TGG | - | chr1_4:49829949-49829968 | None:intergenic | 40.0% | |
| AATGAGGACGAAGATGATCA+TGG | + | chr1_4:49830088-49830107 | Msa0167800:CDS | 40.0% | |
| TAGTGATGTGGAACGAGAAT+TGG | + | chr1_4:49830135-49830154 | Msa0167800:CDS | 40.0% | |
| !! | TTGGTTGATGATGATGAGGT+AGG | + | chr1_4:49830154-49830173 | Msa0167800:intron | 40.0% |
| !! | TGGTTGATGATGATGAGGTA+GGG | + | chr1_4:49830155-49830174 | Msa0167800:intron | 40.0% |
| ! | TGTGCCCTACTTGGTAATAA+AGG | - | chr1_4:49830349-49830368 | None:intergenic | 40.0% |
| !!! | GTGACTTGTTTTTGAGATGG+AGG | + | chr1_4:49830635-49830654 | Msa0167800:CDS | 40.0% |
| GAGATGGAGGATTCAATTGA+TGG | + | chr1_4:49830648-49830667 | Msa0167800:CDS | 40.0% | |
| !!! | AGTTTTAGAGGTGGTGTTGA+TGG | + | chr1_4:49830691-49830710 | Msa0167800:CDS | 40.0% |
| ! | CATAAGAGCCTTTTTGCTGA+CGG | - | chr1_4:49830776-49830795 | None:intergenic | 40.0% |
| TGTGAAGTGTAGAGCCAAAA+TGG | - | chr1_4:49830963-49830982 | None:intergenic | 40.0% | |
| CCGATAACAGATTCAGATAG+AGG | - | chr1_4:49831497-49831516 | None:intergenic | 40.0% | |
| ! | AGTCTAGAGTGGCATTAAGT+TGG | - | chr1_4:49831569-49831588 | None:intergenic | 40.0% |
| GTCCCTACATATATCAATGG+AGG | + | chr1_4:49831592-49831611 | Msa0167800:intron | 40.0% | |
| GAACAAAGGAAAGTCCAACA+TGG | - | chr1_4:49831739-49831758 | None:intergenic | 40.0% | |
| AGACTGGAGTGACAATAATG+TGG | + | chr1_4:49831782-49831801 | Msa0167800:intron | 40.0% | |
| GACTGGAGTGACAATAATGT+GGG | + | chr1_4:49831783-49831802 | Msa0167800:intron | 40.0% | |
| ATGTGGGACATAACTGTTGT+TGG | + | chr1_4:49831799-49831818 | Msa0167800:intron | 40.0% | |
| GGACATAACTGTTGTTGGAT+GGG | + | chr1_4:49831804-49831823 | Msa0167800:intron | 40.0% | |
| ACGAGAATTTGCCAGAAAAC+TGG | - | chr1_4:49829949-49829968 | None:intergenic | 40.0% | |
| AATGAGGACGAAGATGATCA+TGG | + | chr1_4:49830088-49830107 | Msa0167800:CDS | 40.0% | |
| TAGTGATGTGGAACGAGAAT+TGG | + | chr1_4:49830135-49830154 | Msa0167800:CDS | 40.0% | |
| !! | TTGGTTGATGATGATGAGGT+AGG | + | chr1_4:49830154-49830173 | Msa0167800:intron | 40.0% |
| !! | TGGTTGATGATGATGAGGTA+GGG | + | chr1_4:49830155-49830174 | Msa0167800:intron | 40.0% |
| ! | TGTGCCCTACTTGGTAATAA+AGG | - | chr1_4:49830349-49830368 | None:intergenic | 40.0% |
| !!! | GTGACTTGTTTTTGAGATGG+AGG | + | chr1_4:49830635-49830654 | Msa0167800:CDS | 40.0% |
| GAGATGGAGGATTCAATTGA+TGG | + | chr1_4:49830648-49830667 | Msa0167800:CDS | 40.0% | |
| !!! | AGTTTTAGAGGTGGTGTTGA+TGG | + | chr1_4:49830691-49830710 | Msa0167800:CDS | 40.0% |
| ! | CATAAGAGCCTTTTTGCTGA+CGG | - | chr1_4:49830776-49830795 | None:intergenic | 40.0% |
| TGTGAAGTGTAGAGCCAAAA+TGG | - | chr1_4:49830963-49830982 | None:intergenic | 40.0% | |
| CCGATAACAGATTCAGATAG+AGG | - | chr1_4:49831497-49831516 | None:intergenic | 40.0% | |
| ! | AGTCTAGAGTGGCATTAAGT+TGG | - | chr1_4:49831569-49831588 | None:intergenic | 40.0% |
| GTCCCTACATATATCAATGG+AGG | + | chr1_4:49831592-49831611 | Msa0167800:intron | 40.0% | |
| GAACAAAGGAAAGTCCAACA+TGG | - | chr1_4:49831739-49831758 | None:intergenic | 40.0% | |
| AGACTGGAGTGACAATAATG+TGG | + | chr1_4:49831782-49831801 | Msa0167800:intron | 40.0% | |
| GACTGGAGTGACAATAATGT+GGG | + | chr1_4:49831783-49831802 | Msa0167800:intron | 40.0% | |
| ATGTGGGACATAACTGTTGT+TGG | + | chr1_4:49831799-49831818 | Msa0167800:intron | 40.0% | |
| GGACATAACTGTTGTTGGAT+GGG | + | chr1_4:49831804-49831823 | Msa0167800:intron | 40.0% | |
| TTCTGGCAAATTCTCGTTGC+CGG | + | chr1_4:49829952-49829971 | Msa0167800:CDS | 45.0% | |
| ! | TCTTCCCTGATCGGATTTTC+CGG | - | chr1_4:49829974-49829993 | None:intergenic | 45.0% |
| GCATTCATCGGTATCACTCA+TGG | - | chr1_4:49829999-49830018 | None:intergenic | 45.0% | |
| TTACCAAGTAGGGCACATGA+AGG | + | chr1_4:49830352-49830371 | Msa0167800:CDS | 45.0% | |
| TAGAGATAAGGAAGGTCGAC+CGG | + | chr1_4:49830540-49830559 | Msa0167800:CDS | 45.0% | |
| TCATCCTTGCAAGACCACAA+AGG | + | chr1_4:49831027-49831046 | Msa0167800:intron | 45.0% | |
| CATCCTTGCAAGACCACAAA+GGG | + | chr1_4:49831028-49831047 | Msa0167800:intron | 45.0% | |
| AGAATTGGTGTGACCCTTTG+TGG | - | chr1_4:49831044-49831063 | None:intergenic | 45.0% | |
| GACACTCACCTGAGAAGAAT+TGG | - | chr1_4:49831059-49831078 | None:intergenic | 45.0% | |
| TTGTTGAGCACCTCATTGAC+TGG | - | chr1_4:49831290-49831309 | None:intergenic | 45.0% | |
| GGGACATAACTGTTGTTGGA+TGG | + | chr1_4:49831803-49831822 | Msa0167800:intron | 45.0% | |
| CATAACTGTTGTTGGATGGG+AGG | + | chr1_4:49831807-49831826 | Msa0167800:intron | 45.0% | |
| TGGATGGGAGGTGATTTACA+AGG | + | chr1_4:49831819-49831838 | Msa0167800:intron | 45.0% | |
| TGCTGTCACCAACAACACTT+TGG | - | chr1_4:49831894-49831913 | None:intergenic | 45.0% | |
| TTCTGGCAAATTCTCGTTGC+CGG | + | chr1_4:49829952-49829971 | Msa0167800:CDS | 45.0% | |
| ! | TCTTCCCTGATCGGATTTTC+CGG | - | chr1_4:49829974-49829993 | None:intergenic | 45.0% |
| GCATTCATCGGTATCACTCA+TGG | - | chr1_4:49829999-49830018 | None:intergenic | 45.0% | |
| TTACCAAGTAGGGCACATGA+AGG | + | chr1_4:49830352-49830371 | Msa0167800:CDS | 45.0% | |
| TAGAGATAAGGAAGGTCGAC+CGG | + | chr1_4:49830540-49830559 | Msa0167800:CDS | 45.0% | |
| TCATCCTTGCAAGACCACAA+AGG | + | chr1_4:49831027-49831046 | Msa0167800:intron | 45.0% | |
| CATCCTTGCAAGACCACAAA+GGG | + | chr1_4:49831028-49831047 | Msa0167800:intron | 45.0% | |
| AGAATTGGTGTGACCCTTTG+TGG | - | chr1_4:49831044-49831063 | None:intergenic | 45.0% | |
| GACACTCACCTGAGAAGAAT+TGG | - | chr1_4:49831059-49831078 | None:intergenic | 45.0% | |
| TTGTTGAGCACCTCATTGAC+TGG | - | chr1_4:49831290-49831309 | None:intergenic | 45.0% | |
| GGGACATAACTGTTGTTGGA+TGG | + | chr1_4:49831803-49831822 | Msa0167800:intron | 45.0% | |
| CATAACTGTTGTTGGATGGG+AGG | + | chr1_4:49831807-49831826 | Msa0167800:intron | 45.0% | |
| TGGATGGGAGGTGATTTACA+AGG | + | chr1_4:49831819-49831838 | Msa0167800:intron | 45.0% | |
| TGCTGTCACCAACAACACTT+TGG | - | chr1_4:49831894-49831913 | None:intergenic | 45.0% | |
| GTTGCCGGAAAATCCGATCA+GGG | + | chr1_4:49829967-49829986 | Msa0167800:CDS | 50.0% | |
| GGAAAATCCGATCAGGGAAG+AGG | + | chr1_4:49829973-49829992 | Msa0167800:CDS | 50.0% | |
| CACCAAGTCCTGCAGAGATT+AGG | + | chr1_4:49830179-49830198 | Msa0167800:CDS | 50.0% | |
| AGCCTAATCTCTGCAGGACT+TGG | - | chr1_4:49830184-49830203 | None:intergenic | 50.0% | |
| CTCTTGAGCCTAATCTCTGC+AGG | - | chr1_4:49830190-49830209 | None:intergenic | 50.0% | |
| GTACCTTCATGTGCCCTACT+TGG | - | chr1_4:49830358-49830377 | None:intergenic | 50.0% | |
| GCTCAACTCCGTCAGCAAAA+AGG | + | chr1_4:49830765-49830784 | Msa0167800:CDS | 50.0% | |
| ! | TGACCCTTTGTGGTCTTGCA+AGG | - | chr1_4:49831034-49831053 | None:intergenic | 50.0% |
| GGGTCACACCAATTCTTCTC+AGG | + | chr1_4:49831048-49831067 | Msa0167800:intron | 50.0% | |
| ATCCAGCTGGAAGATGCTCT+GGG | - | chr1_4:49831169-49831188 | None:intergenic | 50.0% | |
| TATCCAGCTGGAAGATGCTC+TGG | - | chr1_4:49831170-49831189 | None:intergenic | 50.0% | |
| GAGCATCTTCCAGCTGGATA+TGG | + | chr1_4:49831170-49831189 | Msa0167800:CDS | 50.0% | |
| CATCTTCCAGCTGGATATGG+TGG | + | chr1_4:49831173-49831192 | Msa0167800:CDS | 50.0% | |
| CTTAGACCACCATATCCAGC+TGG | - | chr1_4:49831182-49831201 | None:intergenic | 50.0% | |
| CAGCTGGATATGGTGGTCTA+AGG | + | chr1_4:49831180-49831199 | Msa0167800:CDS | 50.0% | |
| CTGGATATGGTGGTCTAAGG+AGG | + | chr1_4:49831183-49831202 | Msa0167800:CDS | 50.0% | |
| GTAGGGACTAGAGTCTAGAG+TGG | - | chr1_4:49831580-49831599 | None:intergenic | 50.0% | |
| GTTGCCGGAAAATCCGATCA+GGG | + | chr1_4:49829967-49829986 | Msa0167800:CDS | 50.0% | |
| GGAAAATCCGATCAGGGAAG+AGG | + | chr1_4:49829973-49829992 | Msa0167800:CDS | 50.0% | |
| CACCAAGTCCTGCAGAGATT+AGG | + | chr1_4:49830179-49830198 | Msa0167800:CDS | 50.0% | |
| AGCCTAATCTCTGCAGGACT+TGG | - | chr1_4:49830184-49830203 | None:intergenic | 50.0% | |
| CTCTTGAGCCTAATCTCTGC+AGG | - | chr1_4:49830190-49830209 | None:intergenic | 50.0% | |
| GTACCTTCATGTGCCCTACT+TGG | - | chr1_4:49830358-49830377 | None:intergenic | 50.0% | |
| GCTCAACTCCGTCAGCAAAA+AGG | + | chr1_4:49830765-49830784 | Msa0167800:CDS | 50.0% | |
| ! | TGACCCTTTGTGGTCTTGCA+AGG | - | chr1_4:49831034-49831053 | None:intergenic | 50.0% |
| GGGTCACACCAATTCTTCTC+AGG | + | chr1_4:49831048-49831067 | Msa0167800:intron | 50.0% | |
| ATCCAGCTGGAAGATGCTCT+GGG | - | chr1_4:49831169-49831188 | None:intergenic | 50.0% | |
| TATCCAGCTGGAAGATGCTC+TGG | - | chr1_4:49831170-49831189 | None:intergenic | 50.0% | |
| GAGCATCTTCCAGCTGGATA+TGG | + | chr1_4:49831170-49831189 | Msa0167800:CDS | 50.0% | |
| CATCTTCCAGCTGGATATGG+TGG | + | chr1_4:49831173-49831192 | Msa0167800:CDS | 50.0% | |
| CTTAGACCACCATATCCAGC+TGG | - | chr1_4:49831182-49831201 | None:intergenic | 50.0% | |
| CAGCTGGATATGGTGGTCTA+AGG | + | chr1_4:49831180-49831199 | Msa0167800:CDS | 50.0% | |
| CTGGATATGGTGGTCTAAGG+AGG | + | chr1_4:49831183-49831202 | Msa0167800:CDS | 50.0% | |
| GTAGGGACTAGAGTCTAGAG+TGG | - | chr1_4:49831580-49831599 | None:intergenic | 50.0% | |
| CGTTGCCGGAAAATCCGATC+AGG | + | chr1_4:49829966-49829985 | Msa0167800:CDS | 55.0% | |
| CTCATGGCCTCTTCCCTGAT+CGG | - | chr1_4:49829983-49830002 | None:intergenic | 55.0% | |
| CGTTGCCGGAAAATCCGATC+AGG | + | chr1_4:49829966-49829985 | Msa0167800:CDS | 55.0% | |
| CTCATGGCCTCTTCCCTGAT+CGG | - | chr1_4:49829983-49830002 | None:intergenic | 55.0% | |
| ! | GGCCCAGAGCATCTTCCAGC+TGG | + | chr1_4:49831164-49831183 | Msa0167800:CDS | 65.0% |
| ! | GGCCCAGAGCATCTTCCAGC+TGG | + | chr1_4:49831164-49831183 | Msa0167800:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 49829941 | 49832047 | 49829941 | ID=Msa0167800;Name=Msa0167800 |
| chr1_4 | mRNA | 49829941 | 49832047 | 49829941 | ID=Msa0167800-mRNA-1;Parent=Msa0167800;Name=Msa0167800-mRNA-1;_AED=0.20;_eAED=0.20;_QI=0|0|0.16|1|0.6|0.5|6|0|380 |
| chr1_4 | exon | 49829941 | 49830156 | 49829941 | ID=Msa0167800-mRNA-1:exon:14696;Parent=Msa0167800-mRNA-1 |
| chr1_4 | exon | 49830172 | 49830384 | 49830172 | ID=Msa0167800-mRNA-1:exon:14697;Parent=Msa0167800-mRNA-1 |
| chr1_4 | exon | 49830421 | 49830561 | 49830421 | ID=Msa0167800-mRNA-1:exon:14698;Parent=Msa0167800-mRNA-1 |
| chr1_4 | exon | 49830583 | 49830794 | 49830583 | ID=Msa0167800-mRNA-1:exon:14699;Parent=Msa0167800-mRNA-1 |
| chr1_4 | exon | 49831157 | 49831298 | 49831157 | ID=Msa0167800-mRNA-1:exon:14700;Parent=Msa0167800-mRNA-1 |
| chr1_4 | exon | 49831829 | 49832047 | 49831829 | ID=Msa0167800-mRNA-1:exon:14701;Parent=Msa0167800-mRNA-1 |
| chr1_4 | CDS | 49829941 | 49830156 | 49829941 | ID=Msa0167800-mRNA-1:cds;Parent=Msa0167800-mRNA-1 |
| chr1_4 | CDS | 49830172 | 49830384 | 49830172 | ID=Msa0167800-mRNA-1:cds;Parent=Msa0167800-mRNA-1 |
| chr1_4 | CDS | 49830421 | 49830561 | 49830421 | ID=Msa0167800-mRNA-1:cds;Parent=Msa0167800-mRNA-1 |
| chr1_4 | CDS | 49830583 | 49830794 | 49830583 | ID=Msa0167800-mRNA-1:cds;Parent=Msa0167800-mRNA-1 |
| chr1_4 | CDS | 49831157 | 49831298 | 49831157 | ID=Msa0167800-mRNA-1:cds;Parent=Msa0167800-mRNA-1 |
| chr1_4 | CDS | 49831829 | 49832047 | 49831829 | ID=Msa0167800-mRNA-1:cds;Parent=Msa0167800-mRNA-1 |
| Gene Sequence |
| Protein sequence |
