AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0862750


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0862750 MtrunA17_Chr5g0444591 96.583 439 9 1 1 433 1 439 0.0 870
Msa0862750 MtrunA17_Chr3g0099501 78.995 438 76 6 2 433 1 428 0.0 692
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0862750 AT4G26850.1 74.265 408 94 3 2 403 1 403 0.0 626
Msa0862750 AT5G55120.1 69.142 431 112 4 1 422 1 419 0.0 611

Find 146 sgRNAs with CRISPR-Local

Find 233 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACATATGCAGGCTTATTATT+TGG 0.174860 5_4:+62479986 Msa0862750:intron
ATACATGAAGTTGTTATTTC+AGG 0.218410 5_4:-62480989 None:intergenic
GAGAGAGATATTTGAATGTT+TGG 0.226073 5_4:+62478129 Msa0862750:five_prime_UTR
GAGAAAATGAAAAGAGATTA+AGG 0.228079 5_4:-62477991 None:intergenic
TCCGATCTTCTCTTCCTTGC+CGG 0.261854 5_4:+62478317 Msa0862750:five_prime_UTR
TTGTAACCCAATCGAAAATA+TGG 0.264736 5_4:-62479773 None:intergenic
TCAACATCAATTGGGGCATT+TGG 0.280072 5_4:-62479501 None:intergenic
TAAGCAAATGTTACCATTAG+AGG 0.291796 5_4:-62480887 None:intergenic
AAATTCAACTTTACTAAAGT+TGG 0.327694 5_4:+62479420 Msa0862750:CDS
GAGTCGACGGAATCATCTTT+TGG 0.333905 5_4:-62480746 None:intergenic
AGAGAGATATTTGAATGTTT+GGG 0.348114 5_4:+62478130 Msa0862750:five_prime_UTR
GGAGAATTGTCAACATCAAT+TGG 0.349784 5_4:-62479510 None:intergenic
GTCATCCAATTCTTCAGTTA+AGG 0.350663 5_4:-62480708 None:intergenic
GAAAGTAACTGAAAAGGATT+TGG 0.352459 5_4:+62478843 Msa0862750:CDS
CTCAAATCTTGCTGTATTCA+AGG 0.355868 5_4:+62478640 Msa0862750:CDS
AAGGTTCTTCAGCCCTTTGA+TGG 0.358967 5_4:+62479393 Msa0862750:CDS
CATTGCCTTAACTGAAGAAT+TGG 0.361575 5_4:+62480703 Msa0862750:CDS
CAGACTGCACCTTGTTGTTA+AGG 0.367005 5_4:+62481029 Msa0862750:three_prime_UTR
AACCCTTACGTCGTACAGTT+CGG 0.370214 5_4:-62478223 None:intergenic
TGTCTACAACGTGTCAATAC+TGG 0.371067 5_4:-62478160 None:intergenic
TTGGGGCATTTGGATAAAAC+TGG 0.383081 5_4:-62479491 None:intergenic
TTGAATTTGTTTCCATCAAA+GGG 0.385844 5_4:-62479405 None:intergenic
TATAAATCATCTTCACTTCC+AGG 0.386241 5_4:+62479817 Msa0862750:CDS
TTGGTGGGAGCCTTCTCAAT+AGG 0.391256 5_4:-62480020 None:intergenic
ATGAATGAATTCTTGAATGA+AGG 0.391876 5_4:-62478086 None:intergenic
ACCCTTACGTCGTACAGTTC+GGG 0.392593 5_4:-62478222 None:intergenic
AAGAACAAGTGAGTCCAAAA+AGG 0.404311 5_4:-62478899 None:intergenic
AAGAAAATTGCAACTTCAAA+TGG 0.408742 5_4:+62480041 Msa0862750:CDS
ACATATCCTGCTGTGGTGGC+TGG 0.411885 5_4:+62480773 Msa0862750:CDS
AATTCAACTTTACTAAAGTT+GGG 0.412774 5_4:+62479421 Msa0862750:CDS
AAAACATGTCCATACTCAAT+AGG 0.417509 5_4:-62479659 None:intergenic
CCTTCGCCGCACGGTGGGCG+TGG 0.420922 5_4:+62478266 Msa0862750:five_prime_UTR
CTCTCATGATCAATCCTTTG+AGG 0.422064 5_4:-62479710 None:intergenic
GTTGAATTTGTTTCCATCAA+AGG 0.422949 5_4:-62479406 None:intergenic
CAAAGTCTTTGTTAACTGAA+TGG 0.427367 5_4:-62477885 None:intergenic
GACAAAGATTTGAATGAGAA+AGG 0.427606 5_4:-62477770 None:intergenic
GAGAATTGTCAACATCAATT+GGG 0.428232 5_4:-62479509 None:intergenic
CAGGTTAGTCCTATTGAGTA+TGG 0.430846 5_4:+62479650 Msa0862750:intron
CTAAAACTAGACTTATTTGA+AGG 0.430873 5_4:+62478441 Msa0862750:five_prime_UTR
GTTGAAATAAGTACCTCTAA+TGG 0.435404 5_4:+62480874 Msa0862750:three_prime_UTR
TAATACAAAACACAAACATT+AGG 0.437426 5_4:-62480930 None:intergenic
AATGTGGTTGTGAATGAGTT+TGG 0.440232 5_4:-62477967 None:intergenic
CAATTTGAAGCTAGTGAAGA+TGG 0.440382 5_4:+62479462 Msa0862750:CDS
CTTCTCTTCCTTGCCGGTGG+TGG 0.443965 5_4:+62478323 Msa0862750:five_prime_UTR
GAAATATCCGGTTAGAGGTC+TGG 0.444070 5_4:+62480088 Msa0862750:CDS
AAGTTTCACTCTCTGAAGAA+AGG 0.445357 5_4:+62480648 Msa0862750:CDS
TTGCTGAAATATCCGGTTAG+AGG 0.450151 5_4:+62480083 Msa0862750:CDS
TGAAGTTGTTATTTCAGGCT+TGG 0.453381 5_4:-62480984 None:intergenic
CCTCGTATTGTCGGAGGTTG+TGG 0.453538 5_4:+62478607 Msa0862750:CDS
AACCGAGTTCAGAGTTGATA+AGG 0.457439 5_4:+62479374 Msa0862750:CDS
CCACGCCCACCGTGCGGCGA+AGG 0.459138 5_4:-62478266 None:intergenic
AGCTAAGAATCATACATTGA+TGG 0.466074 5_4:-62479544 None:intergenic
TGCAAGAAGCCTCCAAGCAT+TGG 0.470683 5_4:-62480624 None:intergenic
ATCTGAATTGCTGAAATATC+CGG 0.470981 5_4:+62480076 Msa0862750:CDS
TGCCCGAACTGTACGACGTA+AGG 0.476666 5_4:+62478220 Msa0862750:five_prime_UTR
CGATTGGGTTACAACAGCCT+TGG 0.479123 5_4:+62479782 Msa0862750:CDS
CCCGCGGTGTGGGAGATTAG+TGG 0.479789 5_4:+62480554 Msa0862750:CDS
CGTCTGAAGCCAATGCTTGG+AGG 0.485923 5_4:+62480615 Msa0862750:CDS
GTATCAAACCTTGGTTTCAC+AGG 0.489923 5_4:-62479068 None:intergenic
TCGAAGACCAGACCTCTAAC+CGG 0.495869 5_4:-62480095 None:intergenic
CGTGGTGCTCTGCCTTCTGA+AGG 0.496380 5_4:+62478284 Msa0862750:five_prime_UTR
GATTGAGAAAGTAACTGAAA+AGG 0.496775 5_4:+62478837 Msa0862750:CDS
GAGGCTGCTCCTCGTATTGT+CGG 0.499454 5_4:+62478598 Msa0862750:CDS
AGGCGTCTGAAGCCAATGCT+TGG 0.500470 5_4:+62480612 Msa0862750:CDS
TCAGAAATAAGAACATTGTA+AGG 0.501187 5_4:-62480191 None:intergenic
CTTCTTGCTTGCACTTCACA+TGG 0.502279 5_4:+62479733 Msa0862750:CDS
GTCTACAACGTGTCAATACT+GGG 0.525038 5_4:-62478159 None:intergenic
GGACTCACTTGTTCTTGGAG+AGG 0.525110 5_4:+62478906 Msa0862750:CDS
CACACACACTATACTAGGTA+GGG 0.525615 5_4:+62477850 Msa0862750:five_prime_UTR
ACATTGATGGCAACAAAACT+AGG 0.526513 5_4:-62479531 None:intergenic
ACGTTTATTTATTACAAATG+TGG 0.529415 5_4:-62481084 None:intergenic
CAATTCTTCAGTTAAGGCAA+TGG 0.532831 5_4:-62480702 None:intergenic
TATGCCCTTTCCTATTGAGA+AGG 0.533620 5_4:+62480010 Msa0862750:CDS
GTGTCAAGAGGAGCTTCCTA+TGG 0.534484 5_4:+62478876 Msa0862750:CDS
GAAACAAGCTCTTGGAGAAG+TGG 0.534749 5_4:+62480502 Msa0862750:CDS
TTGGTCTCTTCTTGAGGTGT+CGG 0.535533 5_4:-62479353 None:intergenic
AGGATATGTGCTCGAGTCGA+CGG 0.535661 5_4:-62480759 None:intergenic
TATGCAGAGAAACAAGCTCT+TGG 0.537346 5_4:+62480494 Msa0862750:CDS
AGGAAAAGAAGAAAGATGAA+TGG 0.538392 5_4:-62478066 None:intergenic
TGTGAACCAGCCACCACAGC+AGG 0.544066 5_4:-62480779 None:intergenic
GAAGCTCCTCTTGACACTCA+TGG 0.544256 5_4:-62478870 None:intergenic
TGTGGAGCCAGAAATGCATA+AGG 0.544313 5_4:-62481066 None:intergenic
GAAAAGAGATTAAGGAAATG+TGG 0.544324 5_4:-62477983 None:intergenic
ACTCGGTTGGTCTCTTCTTG+AGG 0.545193 5_4:-62479359 None:intergenic
GCAAGGAAGAGAAGATCGGA+GGG 0.546178 5_4:-62478314 None:intergenic
TACTAAAGTTGGGCAAGAAG+AGG 0.554969 5_4:+62479431 Msa0862750:CDS
ACACACACACTATACTAGGT+AGG 0.556670 5_4:+62477849 Msa0862750:five_prime_UTR
CAAAGACACCACCACCGGCA+AGG 0.557929 5_4:-62478331 None:intergenic
CTAACCCTTCGCCGCACGGT+GGG 0.558836 5_4:+62478261 Msa0862750:five_prime_UTR
CCGTGCGGCGAAGGGTTAGT+CGG 0.562532 5_4:-62478257 None:intergenic
GTATTGTCGGAGGTTGTGGT+CGG 0.571733 5_4:+62478611 Msa0862750:CDS
CACGCCCACCGTGCGGCGAA+GGG 0.571760 5_4:-62478265 None:intergenic
CCACTAATCTCCCACACCGC+GGG 0.571845 5_4:-62480554 None:intergenic
GGGAGCCTTCTCAATAGGAA+AGG 0.572937 5_4:-62480015 None:intergenic
AGGAGCAAAGACACCACCAC+CGG 0.574103 5_4:-62478336 None:intergenic
AACCTTATCAACTCTGAACT+CGG 0.575093 5_4:-62479376 None:intergenic
AGGTGCAGTCTGATTTGCTA+AGG 0.577773 5_4:-62481018 None:intergenic
GCCCGAACTGTACGACGTAA+GGG 0.578157 5_4:+62478221 Msa0862750:five_prime_UTR
TGATAATTGGAAACAACAGT+GGG 0.578848 5_4:-62478559 None:intergenic
TTGATAATTGGAAACAACAG+TGG 0.582085 5_4:-62478560 None:intergenic
ACTAACCCTTCGCCGCACGG+TGG 0.583036 5_4:+62478260 Msa0862750:five_prime_UTR
TTCATTGCTCAGCTTAACGA+GGG 0.583209 5_4:+62479330 Msa0862750:CDS
TTTCATTGCTCAGCTTAACG+AGG 0.583245 5_4:+62479329 Msa0862750:CDS
GGAGCCTTCTCAATAGGAAA+GGG 0.584846 5_4:-62480014 None:intergenic
AATGTTCTTATTTCTGACTG+TGG 0.586663 5_4:+62480197 Msa0862750:CDS
GATCTTCTCTTCCTTGCCGG+TGG 0.588834 5_4:+62478320 Msa0862750:five_prime_UTR
TTATCAACTCTGAACTCGGT+TGG 0.589202 5_4:-62479372 None:intergenic
ACAAGTAAATCCCGCGGTGT+GGG 0.589495 5_4:+62480544 Msa0862750:CDS
TGATGATGAAGAAAATGAGG+TGG 0.589608 5_4:-62478039 None:intergenic
AAAATTGCAACTTCAAATGG+TGG 0.589975 5_4:+62480044 Msa0862750:CDS
GTTAGAGGTCTGGTCTTCGA+AGG 0.593102 5_4:+62480098 Msa0862750:CDS
GCAATGAAACCACACTCACC+CGG 0.595083 5_4:-62479315 None:intergenic
GGTGCTCTGCCTTCTGAAGG+TGG 0.599472 5_4:+62478287 Msa0862750:five_prime_UTR
CACAAGTAAATCCCGCGGTG+TGG 0.600336 5_4:+62480543 Msa0862750:CDS
CCGACTAACCCTTCGCCGCA+CGG 0.601989 5_4:+62478257 Msa0862750:five_prime_UTR
ACCGGCAAGGAAGAGAAGAT+CGG 0.608083 5_4:-62478318 None:intergenic
CTCGAGCACATATCCTGCTG+TGG 0.608552 5_4:+62480766 Msa0862750:CDS
TCTACAGTAAACAAATTCAG+TGG 0.609855 5_4:+62480814 Msa0862750:exon
AACTTCAAATGGTGGTGTGA+AGG 0.621124 5_4:+62480052 Msa0862750:CDS
AGAGGTCTGGTCTTCGAAGG+TGG 0.621409 5_4:+62480101 Msa0862750:CDS
GGCAAGGAAGAGAAGATCGG+AGG 0.622258 5_4:-62478315 None:intergenic
TCAAACCTTGGTTTCACAGG+CGG 0.623022 5_4:-62479065 None:intergenic
CCACAACCTCCGACAATACG+AGG 0.623837 5_4:-62478607 None:intergenic
GGCAAACACTCGAAAATGTG+TGG 0.623954 5_4:-62479689 None:intergenic
ACTAGAATGAAGCACGAGGA+GGG 0.624888 5_4:-62477935 None:intergenic
GGCTATCCATGAGTGTCAAG+AGG 0.628126 5_4:+62478864 Msa0862750:CDS
CATTTACACATTCACAAGAG+AGG 0.633350 5_4:-62477814 None:intergenic
GAGGGGCTACCACCTTCAGA+AGG 0.635682 5_4:-62478296 None:intergenic
GAGCACATATCCTGCTGTGG+TGG 0.636001 5_4:+62480769 Msa0862750:CDS
TACTAGAATGAAGCACGAGG+AGG 0.637385 5_4:-62477936 None:intergenic
TAGGTGATTCCGGGTGAGTG+TGG 0.637672 5_4:+62479306 Msa0862750:intron
TTGACACGTTGTAGACATCA+CGG 0.637813 5_4:+62478166 Msa0862750:five_prime_UTR
AGAATTGTCAACATCAATTG+GGG 0.642049 5_4:-62479508 None:intergenic
GTGGGAGATTAGTGGACACA+TGG 0.642377 5_4:+62480562 Msa0862750:CDS
TGTTACCGCCTGTGAAACCA+AGG 0.645108 5_4:+62479060 Msa0862750:CDS
TGGGAAGATCGCATGCAAAG+AGG 0.664311 5_4:+62479022 Msa0862750:CDS
GCTGCTCCTCGTATTGTCGG+AGG 0.665354 5_4:+62478601 Msa0862750:CDS
ACACACACTATACTAGGTAG+GGG 0.674715 5_4:+62477851 Msa0862750:five_prime_UTR
AGAGCACCACGCCCACCGTG+CGG 0.682244 5_4:-62478272 None:intergenic
TCCACTAATCTCCCACACCG+CGG 0.690165 5_4:-62480555 None:intergenic
AAACATTATCCTTAACAACA+AGG 0.690628 5_4:-62481038 None:intergenic
TTATAGTTGCAAATGCACCA+AGG 0.707664 5_4:-62479799 None:intergenic
CAAGGAAGAGAAGATCGGAG+GGG 0.720345 5_4:-62478313 None:intergenic
TGACACACAAGTAAATCCCG+CGG 0.742223 5_4:+62480538 Msa0862750:CDS
ACATTTGTAATAAATAAACG+TGG 0.758038 5_4:+62481086 Msa0862750:three_prime_UTR
TTGTACTAGAATGAAGCACG+AGG 0.764573 5_4:-62477939 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTAATTTTATTATTTAATT+TGG + chr5_4:62478718-62478737 Msa0862750:intron 0.0%
!!! TTTATTATTTAATTTGGTTT+TGG + chr5_4:62478724-62478743 Msa0862750:intron 10.0%
!!! TTATTATTTAATTTGGTTTT+GGG + chr5_4:62478725-62478744 Msa0862750:intron 10.0%
!! TGATTATTAAAATTTGATTA+TGG + chr5_4:62478929-62478948 Msa0862750:intron 10.0%
!!! AAAAGTTAGTATTTTGTATT+TGG + chr5_4:62478502-62478521 Msa0862750:five_prime_UTR 15.0%
!! TAAAATTAATAATACATGCA+TGG - chr5_4:62478708-62478727 None:intergenic 15.0%
!!! TAGATTAATTTTTGTGATTT+TGG + chr5_4:62478765-62478784 Msa0862750:intron 15.0%
!!! TTAGTATTTTGTATTTGGTT+TGG + chr5_4:62478507-62478526 Msa0862750:five_prime_UTR 20.0%
!! AAATGATGCTAAAAATCAAA+AGG + chr5_4:62478533-62478552 Msa0862750:exon 20.0%
!! AATGATGCTAAAAATCAAAA+GGG + chr5_4:62478534-62478553 Msa0862750:exon 20.0%
!!! TTTATGTTTTCTTTTTGTTG+TGG + chr5_4:62478676-62478695 Msa0862750:intron 20.0%
!!! TGTTGATCTTTTTGTTTAAA+AGG + chr5_4:62478977-62478996 Msa0862750:intron 20.0%
!!! TGATACTTTGTTCTTTTTTA+TGG + chr5_4:62479085-62479104 Msa0862750:intron 20.0%
!!! GATACTTTGTTCTTTTTTAT+GGG + chr5_4:62479086-62479105 Msa0862750:intron 20.0%
!!! TTTGATTCTTTGTTCTTTTT+GGG + chr5_4:62479154-62479173 Msa0862750:intron 20.0%
!! AAATTCAACTTTACTAAAGT+TGG + chr5_4:62479420-62479439 Msa0862750:CDS 20.0%
!! AATTCAACTTTACTAAAGTT+GGG + chr5_4:62479421-62479440 Msa0862750:CDS 20.0%
!!! TTTTCACAATATAGTTTTGT+TGG + chr5_4:62479570-62479589 Msa0862750:intron 20.0%
!!! TTTTTTGTTTTCTTGATAAC+AGG + chr5_4:62479631-62479650 Msa0862750:intron 20.0%
!! AAGATATTCAGAGATATAAT+AGG - chr5_4:62479864-62479883 None:intergenic 20.0%
!! AAACATTTATATGACTGTTT+AGG - chr5_4:62480362-62480381 None:intergenic 20.0%
!! TAATACAAAACACAAACATT+AGG - chr5_4:62480933-62480952 None:intergenic 20.0%
!! ACGTTTATTTATTACAAATG+TGG - chr5_4:62481087-62481106 None:intergenic 20.0%
!! ACATTTGTAATAAATAAACG+TGG + chr5_4:62481086-62481105 Msa0862750:three_prime_UTR 20.0%
! GAGAAAATGAAAAGAGATTA+AGG - chr5_4:62477994-62478013 None:intergenic 25.0%
!!! TTTTGATGATGAAGAAAATG+AGG - chr5_4:62478045-62478064 None:intergenic 25.0%
! ATGAATGAATTCTTGAATGA+AGG - chr5_4:62478089-62478108 None:intergenic 25.0%
! AGAGAGATATTTGAATGTTT+GGG + chr5_4:62478130-62478149 Msa0862750:five_prime_UTR 25.0%
! CTAAAACTAGACTTATTTGA+AGG + chr5_4:62478441-62478460 Msa0862750:five_prime_UTR 25.0%
! TGTTTCCAATTATCAAAAAG+AGG + chr5_4:62478567-62478586 Msa0862750:CDS 25.0%
!!! ATCTTTTTGAAAGCATACAA+AGG - chr5_4:62478820-62478839 None:intergenic 25.0%
!! TTTTACTCTTTTCATTTCAG+TGG + chr5_4:62479002-62479021 Msa0862750:intron 25.0%
!! TTTACTCTTTTCATTTCAGT+GGG + chr5_4:62479003-62479022 Msa0862750:intron 25.0%
!! CTTTGATTCTTTGTTCTTTT+TGG + chr5_4:62479153-62479172 Msa0862750:intron 25.0%
!! TTGATTCTTTGTTCTTTTTG+GGG + chr5_4:62479155-62479174 Msa0862750:intron 25.0%
!! TTGAATTTGTTTCCATCAAA+GGG - chr5_4:62479408-62479427 None:intergenic 25.0%
!!! ATAGTTTTGTTGGTTCATAA+AGG + chr5_4:62479580-62479599 Msa0862750:intron 25.0%
!!! ATTTGAAGTTGCAATTTTCT+TGG - chr5_4:62480042-62480061 None:intergenic 25.0%
! AAGAAAATTGCAACTTCAAA+TGG + chr5_4:62480041-62480060 Msa0862750:CDS 25.0%
! TCAGAAATAAGAACATTGTA+AGG - chr5_4:62480194-62480213 None:intergenic 25.0%
! ACGTTATGAAATTATGTCAA+GGG - chr5_4:62480423-62480442 None:intergenic 25.0%
!!! ATACATGAAGTTGTTATTTC+AGG - chr5_4:62480992-62481011 None:intergenic 25.0%
! AAACATTATCCTTAACAACA+AGG - chr5_4:62481041-62481060 None:intergenic 25.0%
!!! TTTTTTACCTTATGCATTTC+TGG + chr5_4:62481059-62481078 Msa0862750:three_prime_UTR 25.0%
TGAATGAGAAAGGAAAAAGA+GGG - chr5_4:62477763-62477782 None:intergenic 30.0%
TTGAATGAGAAAGGAAAAAG+AGG - chr5_4:62477764-62477783 None:intergenic 30.0%
GACAAAGATTTGAATGAGAA+AGG - chr5_4:62477773-62477792 None:intergenic 30.0%
CAAAGTCTTTGTTAACTGAA+TGG - chr5_4:62477888-62477907 None:intergenic 30.0%
GAAAAGAGATTAAGGAAATG+TGG - chr5_4:62477986-62478005 None:intergenic 30.0%
AGGAAAAGAAGAAAGATGAA+TGG - chr5_4:62478069-62478088 None:intergenic 30.0%
GAGAGAGATATTTGAATGTT+TGG + chr5_4:62478129-62478148 Msa0862750:five_prime_UTR 30.0%
TGATAATTGGAAACAACAGT+GGG - chr5_4:62478562-62478581 None:intergenic 30.0%
! TTGATAATTGGAAACAACAG+TGG - chr5_4:62478563-62478582 None:intergenic 30.0%
TTCCAATTATCAAAAAGAGG+AGG + chr5_4:62478570-62478589 Msa0862750:CDS 30.0%
!! AACCTCCTCTTTTTGATAAT+TGG - chr5_4:62478575-62478594 None:intergenic 30.0%
AATTATCAAAAAGAGGAGGT+TGG + chr5_4:62478574-62478593 Msa0862750:CDS 30.0%
GATTGAGAAAGTAACTGAAA+AGG + chr5_4:62478837-62478856 Msa0862750:CDS 30.0%
GAAAGTAACTGAAAAGGATT+TGG + chr5_4:62478843-62478862 Msa0862750:CDS 30.0%
! AAGAACAAAGTATCAAACCT+TGG - chr5_4:62479080-62479099 None:intergenic 30.0%
! TGATTCTTTGTTCTTTTTGG+GGG + chr5_4:62479156-62479175 Msa0862750:intron 30.0%
! ATGTGTTCTTGTGATCATTT+TGG + chr5_4:62479281-62479300 Msa0862750:intron 30.0%
! GTTGAATTTGTTTCCATCAA+AGG - chr5_4:62479409-62479428 None:intergenic 30.0%
AGAATTGTCAACATCAATTG+GGG - chr5_4:62479511-62479530 None:intergenic 30.0%
GAGAATTGTCAACATCAATT+GGG - chr5_4:62479512-62479531 None:intergenic 30.0%
AGCTAAGAATCATACATTGA+TGG - chr5_4:62479547-62479566 None:intergenic 30.0%
AAAACATGTCCATACTCAAT+AGG - chr5_4:62479662-62479681 None:intergenic 30.0%
! TGCTAATCCATATTTTCGAT+TGG + chr5_4:62479766-62479785 Msa0862750:CDS 30.0%
! GCTAATCCATATTTTCGATT+GGG + chr5_4:62479767-62479786 Msa0862750:CDS 30.0%
TTGTAACCCAATCGAAAATA+TGG - chr5_4:62479776-62479795 None:intergenic 30.0%
TATAAATCATCTTCACTTCC+AGG + chr5_4:62479817-62479836 Msa0862750:CDS 30.0%
TGAGATTATTGCTACAGTAA+TGG + chr5_4:62479883-62479902 Msa0862750:intron 30.0%
AACAGAACAATGATAAGCAA+TGG - chr5_4:62479923-62479942 None:intergenic 30.0%
CAAAATCAGCAAATTCCAAT+TGG - chr5_4:62479962-62479981 None:intergenic 30.0%
!!! TTGGAATTTGCTGATTTTGT+TGG + chr5_4:62479963-62479982 Msa0862750:intron 30.0%
ACATATGCAGGCTTATTATT+TGG + chr5_4:62479986-62480005 Msa0862750:intron 30.0%
AAAATTGCAACTTCAAATGG+TGG + chr5_4:62480044-62480063 Msa0862750:CDS 30.0%
ATCTGAATTGCTGAAATATC+CGG + chr5_4:62480076-62480095 Msa0862750:CDS 30.0%
!!! AGGTATGTTGTTGTTTTGTA+GGG - chr5_4:62480174-62480193 None:intergenic 30.0%
!!! AAGGTATGTTGTTGTTTTGT+AGG - chr5_4:62480175-62480194 None:intergenic 30.0%
!! AATGTTCTTATTTCTGACTG+TGG + chr5_4:62480197-62480216 Msa0862750:CDS 30.0%
TCTCAAACTAATTTCCTGTT+TGG + chr5_4:62480255-62480274 Msa0862750:intron 30.0%
AAGTGCTTATTTATCCAAAC+AGG - chr5_4:62480272-62480291 None:intergenic 30.0%
TAAGCTAATAAGCTATCCTA+GGG + chr5_4:62480298-62480317 Msa0862750:intron 30.0%
GACGTTATGAAATTATGTCA+AGG - chr5_4:62480424-62480443 None:intergenic 30.0%
CAAGAAAATGAAAGTTGAAG+AGG - chr5_4:62480446-62480465 None:intergenic 30.0%
TCTACAGTAAACAAATTCAG+TGG + chr5_4:62480814-62480833 Msa0862750:exon 30.0%
GTTGAAATAAGTACCTCTAA+TGG + chr5_4:62480874-62480893 Msa0862750:three_prime_UTR 30.0%
TAAGCAAATGTTACCATTAG+AGG - chr5_4:62480890-62480909 None:intergenic 30.0%
! CTGTATTGTAGTTTTTGTCA+TGG + chr5_4:62480956-62480975 Msa0862750:three_prime_UTR 30.0%
CATTTACACATTCACAAGAG+AGG - chr5_4:62477817-62477836 None:intergenic 35.0%
AATGTGGTTGTGAATGAGTT+TGG - chr5_4:62477970-62477989 None:intergenic 35.0%
! TGATGATGAAGAAAATGAGG+TGG - chr5_4:62478042-62478061 None:intergenic 35.0%
! CGGCTTTTCTTAGAGTTTAT+CGG + chr5_4:62478186-62478205 Msa0862750:five_prime_UTR 35.0%
GAGAAAGAAGAAGAAGAAGA+AGG - chr5_4:62478359-62478378 None:intergenic 35.0%
! CTCAAATCTTGCTGTATTCA+AGG + chr5_4:62478640-62478659 Msa0862750:CDS 35.0%
AAGAACAAGTGAGTCCAAAA+AGG - chr5_4:62478902-62478921 None:intergenic 35.0%
! TTTTTGGACTCACTTGTTCT+TGG + chr5_4:62478901-62478920 Msa0862750:CDS 35.0%
! TGTGTTTGTGTTGTGCTTTT+TGG + chr5_4:62479115-62479134 Msa0862750:intron 35.0%
!! GATTCTTTGTTCTTTTTGGG+GGG + chr5_4:62479157-62479176 Msa0862750:intron 35.0%
TATATCCATGCATCTGCTAA+AGG - chr5_4:62479204-62479223 None:intergenic 35.0%
!! TCTTGTGATCATTTTGGTGT+AGG + chr5_4:62479287-62479306 Msa0862750:intron 35.0%
AACCTTATCAACTCTGAACT+CGG - chr5_4:62479379-62479398 None:intergenic 35.0%
! CAATTTGAAGCTAGTGAAGA+TGG + chr5_4:62479462-62479481 Msa0862750:CDS 35.0%
GGAGAATTGTCAACATCAAT+TGG - chr5_4:62479513-62479532 None:intergenic 35.0%
! ACATTGATGGCAACAAAACT+AGG - chr5_4:62479534-62479553 None:intergenic 35.0%
TTATAGTTGCAAATGCACCA+AGG - chr5_4:62479802-62479821 None:intergenic 35.0%
ATTGTTCTGTTTCGCACTTT+CGG + chr5_4:62479932-62479951 Msa0862750:intron 35.0%
! TGATTTTGTTGGACATATGC+AGG + chr5_4:62479974-62479993 Msa0862750:intron 35.0%
! GAAGTTGCAATTTTCTTGGT+GGG - chr5_4:62480038-62480057 None:intergenic 35.0%
! TGAAGTTGCAATTTTCTTGG+TGG - chr5_4:62480039-62480058 None:intergenic 35.0%
! ACAAGTGTTTCTTTTACCAC+AGG + chr5_4:62480223-62480242 Msa0862750:intron 35.0%
!! TTTGAGAGTTGTTTTACCTG+TGG - chr5_4:62480242-62480261 None:intergenic 35.0%
GTAAGCTAATAAGCTATCCT+AGG + chr5_4:62480297-62480316 Msa0862750:intron 35.0%
GGCTTATTTGAGCTTATCTA+CGG - chr5_4:62480389-62480408 None:intergenic 35.0%
AAATTATGTCAAGGGCTGTT+TGG - chr5_4:62480415-62480434 None:intergenic 35.0%
!!! CATGGTTTTGAAGAGGAAAA+AGG + chr5_4:62480580-62480599 Msa0862750:CDS 35.0%
! AAGTTTCACTCTCTGAAGAA+AGG + chr5_4:62480648-62480667 Msa0862750:CDS 35.0%
CAATTCTTCAGTTAAGGCAA+TGG - chr5_4:62480705-62480724 None:intergenic 35.0%
CATTGCCTTAACTGAAGAAT+TGG + chr5_4:62480703-62480722 Msa0862750:CDS 35.0%
GTCATCCAATTCTTCAGTTA+AGG - chr5_4:62480711-62480730 None:intergenic 35.0%
!! TGAAGTTGTTATTTCAGGCT+TGG - chr5_4:62480987-62481006 None:intergenic 35.0%
ACACACACACACACTATACT+AGG + chr5_4:62477845-62477864 Msa0862750:five_prime_UTR 40.0%
ACACACACACTATACTAGGT+AGG + chr5_4:62477849-62477868 Msa0862750:five_prime_UTR 40.0%
CACACACACTATACTAGGTA+GGG + chr5_4:62477850-62477869 Msa0862750:five_prime_UTR 40.0%
ACACACACTATACTAGGTAG+GGG + chr5_4:62477851-62477870 Msa0862750:five_prime_UTR 40.0%
TTGTACTAGAATGAAGCACG+AGG - chr5_4:62477942-62477961 None:intergenic 40.0%
GTCTACAACGTGTCAATACT+GGG - chr5_4:62478162-62478181 None:intergenic 40.0%
TGTCTACAACGTGTCAATAC+TGG - chr5_4:62478163-62478182 None:intergenic 40.0%
TTGACACGTTGTAGACATCA+CGG + chr5_4:62478166-62478185 Msa0862750:five_prime_UTR 40.0%
GTATCAAACCTTGGTTTCAC+AGG - chr5_4:62479071-62479090 None:intergenic 40.0%
!! TTGTGCTTTTTGGAGATGCA+TGG + chr5_4:62479125-62479144 Msa0862750:intron 40.0%
!! CATTTTGGTGTAGGTGATTC+CGG + chr5_4:62479296-62479315 Msa0862750:intron 40.0%
!! ATTTTGGTGTAGGTGATTCC+GGG + chr5_4:62479297-62479316 Msa0862750:intron 40.0%
TTTCATTGCTCAGCTTAACG+AGG + chr5_4:62479329-62479348 Msa0862750:CDS 40.0%
TTCATTGCTCAGCTTAACGA+GGG + chr5_4:62479330-62479349 Msa0862750:CDS 40.0%
TTATCAACTCTGAACTCGGT+TGG - chr5_4:62479375-62479394 None:intergenic 40.0%
!! AACCGAGTTCAGAGTTGATA+AGG + chr5_4:62479374-62479393 Msa0862750:CDS 40.0%
TACTAAAGTTGGGCAAGAAG+AGG + chr5_4:62479431-62479450 Msa0862750:CDS 40.0%
! TTGGGGCATTTGGATAAAAC+TGG - chr5_4:62479494-62479513 None:intergenic 40.0%
! TCAACATCAATTGGGGCATT+TGG - chr5_4:62479504-62479523 None:intergenic 40.0%
TGGTTCATAAAGGCTAGAGT+AGG + chr5_4:62479590-62479609 Msa0862750:intron 40.0%
! CAGGTTAGTCCTATTGAGTA+TGG + chr5_4:62479650-62479669 Msa0862750:intron 40.0%
!!! TTTTCGAGTGTTTGCCTCAA+AGG + chr5_4:62479696-62479715 Msa0862750:CDS 40.0%
CTCTCATGATCAATCCTTTG+AGG - chr5_4:62479713-62479732 None:intergenic 40.0%
TATGCCCTTTCCTATTGAGA+AGG + chr5_4:62480010-62480029 Msa0862750:CDS 40.0%
! AACTTCAAATGGTGGTGTGA+AGG + chr5_4:62480052-62480071 Msa0862750:CDS 40.0%
TTGCTGAAATATCCGGTTAG+AGG + chr5_4:62480083-62480102 Msa0862750:CDS 40.0%
TATGCAGAGAAACAAGCTCT+TGG + chr5_4:62480494-62480513 Msa0862750:CDS 40.0%
ACTAGAATGAAGCACGAGGA+GGG - chr5_4:62477938-62477957 None:intergenic 45.0%
TACTAGAATGAAGCACGAGG+AGG - chr5_4:62477939-62477958 None:intergenic 45.0%
AACCCTTACGTCGTACAGTT+CGG - chr5_4:62478226-62478245 None:intergenic 45.0%
TCAAAAAGAGGAGGTTGGAG+AGG + chr5_4:62478579-62478598 Msa0862750:CDS 45.0%
AGTGAGTCCAAAAAGGCCAT+AGG - chr5_4:62478895-62478914 None:intergenic 45.0%
TCAAACCTTGGTTTCACAGG+CGG - chr5_4:62479068-62479087 None:intergenic 45.0%
TTGTGCCTTTAGCAGATGCA+TGG + chr5_4:62479196-62479215 Msa0862750:intron 45.0%
TTGGTCTCTTCTTGAGGTGT+CGG - chr5_4:62479356-62479375 None:intergenic 45.0%
AAGGTTCTTCAGCCCTTTGA+TGG + chr5_4:62479393-62479412 Msa0862750:CDS 45.0%
GGCAAACACTCGAAAATGTG+TGG - chr5_4:62479692-62479711 None:intergenic 45.0%
CTTCTTGCTTGCACTTCACA+TGG + chr5_4:62479733-62479752 Msa0862750:CDS 45.0%
TCATCTTCACTTCCAGGTAC+TGG + chr5_4:62479823-62479842 Msa0862750:intron 45.0%
AGCTATCAATGTCCAGTACC+TGG - chr5_4:62479838-62479857 None:intergenic 45.0%
GGAGCCTTCTCAATAGGAAA+GGG - chr5_4:62480017-62480036 None:intergenic 45.0%
GAAATATCCGGTTAGAGGTC+TGG + chr5_4:62480088-62480107 Msa0862750:CDS 45.0%
AAGCTATCCTAGGGAGCTTA+TGG + chr5_4:62480307-62480326 Msa0862750:intron 45.0%
ATGTCAAGGGCTGTTTGGAT+CGG - chr5_4:62480410-62480429 None:intergenic 45.0%
GAAACAAGCTCTTGGAGAAG+TGG + chr5_4:62480502-62480521 Msa0862750:CDS 45.0%
TGACACACAAGTAAATCCCG+CGG + chr5_4:62480538-62480557 Msa0862750:CDS 45.0%
!!! GTGGACACATGGTTTTGAAG+AGG + chr5_4:62480573-62480592 Msa0862750:CDS 45.0%
GAGGAAAAAGGATTTCGACG+AGG + chr5_4:62480592-62480611 Msa0862750:CDS 45.0%
! GAGTCGACGGAATCATCTTT+TGG - chr5_4:62480749-62480768 None:intergenic 45.0%
!! AGGTGCAGTCTGATTTGCTA+AGG - chr5_4:62481021-62481040 None:intergenic 45.0%
!! CAGACTGCACCTTGTTGTTA+AGG + chr5_4:62481029-62481048 Msa0862750:three_prime_UTR 45.0%
TGTGGAGCCAGAAATGCATA+AGG - chr5_4:62481069-62481088 None:intergenic 45.0%
ACCCTTACGTCGTACAGTTC+GGG - chr5_4:62478225-62478244 None:intergenic 50.0%
CAAGGAAGAGAAGATCGGAG+GGG - chr5_4:62478316-62478335 None:intergenic 50.0%
GCAAGGAAGAGAAGATCGGA+GGG - chr5_4:62478317-62478336 None:intergenic 50.0%
TCCGATCTTCTCTTCCTTGC+CGG + chr5_4:62478317-62478336 Msa0862750:five_prime_UTR 50.0%
ACCGGCAAGGAAGAGAAGAT+CGG - chr5_4:62478321-62478340 None:intergenic 50.0%
GTATTGTCGGAGGTTGTGGT+CGG + chr5_4:62478611-62478630 Msa0862750:CDS 50.0%
GGCTATCCATGAGTGTCAAG+AGG + chr5_4:62478864-62478883 Msa0862750:CDS 50.0%
GAAGCTCCTCTTGACACTCA+TGG - chr5_4:62478873-62478892 None:intergenic 50.0%
GTGTCAAGAGGAGCTTCCTA+TGG + chr5_4:62478876-62478895 Msa0862750:CDS 50.0%
! GGAGCTTCCTATGGCCTTTT+TGG + chr5_4:62478885-62478904 Msa0862750:CDS 50.0%
GGACTCACTTGTTCTTGGAG+AGG + chr5_4:62478906-62478925 Msa0862750:CDS 50.0%
TGGGAAGATCGCATGCAAAG+AGG + chr5_4:62479022-62479041 Msa0862750:CDS 50.0%
TGTTACCGCCTGTGAAACCA+AGG + chr5_4:62479060-62479079 Msa0862750:CDS 50.0%
GCAATGAAACCACACTCACC+CGG - chr5_4:62479318-62479337 None:intergenic 50.0%
!! ACTCGGTTGGTCTCTTCTTG+AGG - chr5_4:62479362-62479381 None:intergenic 50.0%
CGATTGGGTTACAACAGCCT+TGG + chr5_4:62479782-62479801 Msa0862750:CDS 50.0%
CGCACTTTCGGCAATCCAAT+TGG + chr5_4:62479944-62479963 Msa0862750:intron 50.0%
GGGAGCCTTCTCAATAGGAA+AGG - chr5_4:62480018-62480037 None:intergenic 50.0%
TTGGTGGGAGCCTTCTCAAT+AGG - chr5_4:62480023-62480042 None:intergenic 50.0%
TCGAAGACCAGACCTCTAAC+CGG - chr5_4:62480098-62480117 None:intergenic 50.0%
! GTTAGAGGTCTGGTCTTCGA+AGG + chr5_4:62480098-62480117 Msa0862750:CDS 50.0%
GTCATGTCCATAAGCTCCCT+AGG - chr5_4:62480317-62480336 None:intergenic 50.0%
ACAAGTAAATCCCGCGGTGT+GGG + chr5_4:62480544-62480563 Msa0862750:CDS 50.0%
! GTGGGAGATTAGTGGACACA+TGG + chr5_4:62480562-62480581 Msa0862750:CDS 50.0%
TGCAAGAAGCCTCCAAGCAT+TGG - chr5_4:62480627-62480646 None:intergenic 50.0%
AGGATATGTGCTCGAGTCGA+CGG - chr5_4:62480762-62480781 None:intergenic 50.0%
TGCCCGAACTGTACGACGTA+AGG + chr5_4:62478220-62478239 Msa0862750:five_prime_UTR 55.0%
GCCCGAACTGTACGACGTAA+GGG + chr5_4:62478221-62478240 Msa0862750:five_prime_UTR 55.0%
GGCAAGGAAGAGAAGATCGG+AGG - chr5_4:62478318-62478337 None:intergenic 55.0%
GATCTTCTCTTCCTTGCCGG+TGG + chr5_4:62478320-62478339 Msa0862750:five_prime_UTR 55.0%
AGGAGCAAAGACACCACCAC+CGG - chr5_4:62478339-62478358 None:intergenic 55.0%
GAGGCTGCTCCTCGTATTGT+CGG + chr5_4:62478598-62478617 Msa0862750:CDS 55.0%
CCACAACCTCCGACAATACG+AGG - chr5_4:62478610-62478629 None:intergenic 55.0%
CCTCGTATTGTCGGAGGTTG+TGG + chr5_4:62478607-62478626 Msa0862750:CDS 55.0%
TAGGTGATTCCGGGTGAGTG+TGG + chr5_4:62479306-62479325 Msa0862750:intron 55.0%
! AGAGGTCTGGTCTTCGAAGG+TGG + chr5_4:62480101-62480120 Msa0862750:CDS 55.0%
CACAAGTAAATCCCGCGGTG+TGG + chr5_4:62480543-62480562 Msa0862750:CDS 55.0%
TCCACTAATCTCCCACACCG+CGG - chr5_4:62480558-62480577 None:intergenic 55.0%
! AGGCGTCTGAAGCCAATGCT+TGG + chr5_4:62480612-62480631 Msa0862750:CDS 55.0%
! CGTCTGAAGCCAATGCTTGG+AGG + chr5_4:62480615-62480634 Msa0862750:CDS 55.0%
CTCGAGCACATATCCTGCTG+TGG + chr5_4:62480766-62480785 Msa0862750:CDS 55.0%
GAGCACATATCCTGCTGTGG+TGG + chr5_4:62480769-62480788 Msa0862750:CDS 55.0%
ACATATCCTGCTGTGGTGGC+TGG + chr5_4:62480773-62480792 Msa0862750:CDS 55.0%
CGTGGTGCTCTGCCTTCTGA+AGG + chr5_4:62478284-62478303 Msa0862750:five_prime_UTR 60.0%
! GGTGCTCTGCCTTCTGAAGG+TGG + chr5_4:62478287-62478306 Msa0862750:five_prime_UTR 60.0%
GAGGGGCTACCACCTTCAGA+AGG - chr5_4:62478299-62478318 None:intergenic 60.0%
CTTCTCTTCCTTGCCGGTGG+TGG + chr5_4:62478323-62478342 Msa0862750:five_prime_UTR 60.0%
CAAAGACACCACCACCGGCA+AGG - chr5_4:62478334-62478353 None:intergenic 60.0%
GCTGCTCCTCGTATTGTCGG+AGG + chr5_4:62478601-62478620 Msa0862750:CDS 60.0%
CCACTAATCTCCCACACCGC+GGG - chr5_4:62480557-62480576 None:intergenic 60.0%
TGTGAACCAGCCACCACAGC+AGG - chr5_4:62480782-62480801 None:intergenic 60.0%
! CCGTGCGGCGAAGGGTTAGT+CGG - chr5_4:62478260-62478279 None:intergenic 65.0%
CCGACTAACCCTTCGCCGCA+CGG + chr5_4:62478257-62478276 Msa0862750:five_prime_UTR 65.0%
ACTAACCCTTCGCCGCACGG+TGG + chr5_4:62478260-62478279 Msa0862750:five_prime_UTR 65.0%
CTAACCCTTCGCCGCACGGT+GGG + chr5_4:62478261-62478280 Msa0862750:five_prime_UTR 65.0%
CCCGCGGTGTGGGAGATTAG+TGG + chr5_4:62480554-62480573 Msa0862750:CDS 65.0%
! AGAGCACCACGCCCACCGTG+CGG - chr5_4:62478275-62478294 None:intergenic 70.0%
CACGCCCACCGTGCGGCGAA+GGG - chr5_4:62478268-62478287 None:intergenic 75.0%
! CCACGCCCACCGTGCGGCGA+AGG - chr5_4:62478269-62478288 None:intergenic 80.0%
! CCTTCGCCGCACGGTGGGCG+TGG + chr5_4:62478266-62478285 Msa0862750:five_prime_UTR 80.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 62477718 62481198 62477718 ID=Msa0862750;Name=Msa0862750
chr5_4 mRNA 62477718 62481198 62477718 ID=Msa0862750-mRNA-1;Parent=Msa0862750;Name=Msa0862750-mRNA-1;_AED=0.04;_eAED=0.04;_QI=817|0.83|0.85|1|0.83|0.85|7|375|433
chr5_4 exon 62477718 62478661 62477718 ID=Msa0862750-mRNA-1:exon:19472;Parent=Msa0862750-mRNA-1
chr5_4 exon 62478806 62478927 62478806 ID=Msa0862750-mRNA-1:exon:19473;Parent=Msa0862750-mRNA-1
chr5_4 exon 62479022 62479081 62479022 ID=Msa0862750-mRNA-1:exon:19474;Parent=Msa0862750-mRNA-1
chr5_4 exon 62479309 62479551 62479309 ID=Msa0862750-mRNA-1:exon:19475;Parent=Msa0862750-mRNA-1
chr5_4 exon 62479653 62479838 62479653 ID=Msa0862750-mRNA-1:exon:19476;Parent=Msa0862750-mRNA-1
chr5_4 exon 62479996 62480226 62479996 ID=Msa0862750-mRNA-1:exon:19477;Parent=Msa0862750-mRNA-1
chr5_4 exon 62480491 62481198 62480491 ID=Msa0862750-mRNA-1:exon:19478;Parent=Msa0862750-mRNA-1
chr5_4 five_prime_UTR 62477718 62478534 62477718 ID=Msa0862750-mRNA-1:five_prime_utr;Parent=Msa0862750-mRNA-1
chr5_4 CDS 62478535 62478661 62478535 ID=Msa0862750-mRNA-1:cds;Parent=Msa0862750-mRNA-1
chr5_4 CDS 62478806 62478927 62478806 ID=Msa0862750-mRNA-1:cds;Parent=Msa0862750-mRNA-1
chr5_4 CDS 62479022 62479081 62479022 ID=Msa0862750-mRNA-1:cds;Parent=Msa0862750-mRNA-1
chr5_4 CDS 62479309 62479551 62479309 ID=Msa0862750-mRNA-1:cds;Parent=Msa0862750-mRNA-1
chr5_4 CDS 62479653 62479838 62479653 ID=Msa0862750-mRNA-1:cds;Parent=Msa0862750-mRNA-1
chr5_4 CDS 62479996 62480226 62479996 ID=Msa0862750-mRNA-1:cds;Parent=Msa0862750-mRNA-1
chr5_4 CDS 62480491 62480823 62480491 ID=Msa0862750-mRNA-1:cds;Parent=Msa0862750-mRNA-1
chr5_4 three_prime_UTR 62480824 62481198 62480824 ID=Msa0862750-mRNA-1:three_prime_utr;Parent=Msa0862750-mRNA-1
Gene Sequence

>Msa0862750

ATGATGCTAAAAATCAAAAGGGTTCCCACTGTTGTTTCCAATTATCAAAAAGAGGAGGTTGGAGAGGCTGCTCCTCGTATTGTCGGAGGTTGTGGTCGGAATTGTCTCAAATCTTGCTGTATTCAAGATGCAAAGCTGCCTTTGTATGCTTTCAAAAAGATTGAGAAAGTAACTGAAAAGGATTTGGCTATCCATGAGTGTCAAGAGGAGCTTCCTATGGCCTTTTTGGACTCACTTGTTCTTGGAGAGTGGGAAGATCGCATGCAAAGAGGACTTTTTCGTTATGATGTTACCGCCTGTGAAACCAAGGTGATTCCGGGTGAGTGTGGTTTCATTGCTCAGCTTAACGAGGGCCGACACCTCAAGAAGAGACCAACCGAGTTCAGAGTTGATAAGGTTCTTCAGCCCTTTGATGGAAACAAATTCAACTTTACTAAAGTTGGGCAAGAAGAGGTTCTGTTTCAATTTGAAGCTAGTGAAGATGGTGAAGTCCAGTTTTATCCAAATGCCCCAATTGATGTTGACAATTCTCCTAGTTTTGTTGCCATCAATGTTAGTCCTATTGAGTATGGACATGTTTTGCTGATTCCACACATTTTCGAGTGTTTGCCTCAAAGGATTGATCATGAGAGCTTCTTGCTTGCACTTCACATGGCAGCTGAAGCTGCTAATCCATATTTTCGATTGGGTTACAACAGCCTTGGTGCATTTGCAACTATAAATCATCTTCACTTCCAGGCTTATTATTTGGCTATGCCCTTTCCTATTGAGAAGGCTCCCACCAAGAAAATTGCAACTTCAAATGGTGGTGTGAAGGTATCTGAATTGCTGAAATATCCGGTTAGAGGTCTGGTCTTCGAAGGTGGCGACACGCTCGAAGATTTATCAAAAATTGTTTCAGATGCTTGTATCTCCCTACAAAACAACAACATACCTTACAATGTTCTTATTTCTGACTGTGGAACACAATGTTATGCAGAGAAACAAGCTCTTGGAGAAGTGGATGCTGAGCTTCTTGACACACAAGTAAATCCCGCGGTGTGGGAGATTAGTGGACACATGGTTTTGAAGAGGAAAAAGGATTTCGACGAGGCGTCTGAAGCCAATGCTTGGAGGCTTCTTGCAGAAGTTTCACTCTCTGAAGAAAGGTTTCAAGAAGTTAATGCTATTATCTTTGAAGCCATTGCCTTAACTGAAGAATTGGATGACAAAGCTCAATGTCTTCCAAAAGATGATTCCGTCGACTCGAGCACATATCCTGCTGTGGTGGCTGGTTCACAAGCATGTGTTGTTCTACAGTAA

Protein sequence

>Msa0862750

MMLKIKRVPTVVSNYQKEEVGEAAPRIVGGCGRNCLKSCCIQDAKLPLYAFKKIEKVTEKDLAIHECQEELPMAFLDSLVLGEWEDRMQRGLFRYDVTACETKVIPGECGFIAQLNEGRHLKKRPTEFRVDKVLQPFDGNKFNFTKVGQEEVLFQFEASEDGEVQFYPNAPIDVDNSPSFVAINVSPIEYGHVLLIPHIFECLPQRIDHESFLLALHMAAEAANPYFRLGYNSLGAFATINHLHFQAYYLAMPFPIEKAPTKKIATSNGGVKVSELLKYPVRGLVFEGGDTLEDLSKIVSDACISLQNNNIPYNVLISDCGTQCYAEKQALGEVDAELLDTQVNPAVWEISGHMVLKRKKDFDEASEANAWRLLAEVSLSEERFQEVNAIIFEAIALTEELDDKAQCLPKDDSVDSSTYPAVVAGSQACVVLQ*