Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0075370 | XP_013468489.1 | 96.499 | 457 | 16 | 0 | 1 | 457 | 1 | 457 | 0.0 | 906 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0075370 | sp|Q94C59|PATL4_ARATH | 45.808 | 334 | 171 | 5 | 128 | 457 | 201 | 528 | 1.21e-99 | 312 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0075370 | A0A072VLM7 | 96.499 | 457 | 16 | 0 | 1 | 457 | 1 | 457 | 0.0 | 906 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000610 | Msa0075370 | 0.816848 | 4.475343e-52 | -8.615850e-47 |
| Msa0011060 | Msa0075370 | 0.803608 | 3.213853e-49 | -8.615850e-47 |
| Msa0025060 | Msa0075370 | 0.871925 | 4.711080e-67 | -8.615850e-47 |
| Msa0025090 | Msa0075370 | 0.872438 | 3.181322e-67 | -8.615850e-47 |
| Msa0027610 | Msa0075370 | 0.961083 | 2.716831e-119 | -8.615850e-47 |
| Msa0030760 | Msa0075370 | 0.812139 | 4.927548e-51 | -8.615850e-47 |
| Msa0032890 | Msa0075370 | 0.802104 | 6.572456e-49 | -8.615850e-47 |
| Msa0036560 | Msa0075370 | 0.828694 | 7.798421e-55 | -8.615850e-47 |
| Msa0042500 | Msa0075370 | 0.826736 | 2.303125e-54 | -8.615850e-47 |
| Msa0044010 | Msa0075370 | -0.802995 | 4.305289e-49 | -8.615850e-47 |
| Msa0049670 | Msa0075370 | 0.827165 | 1.818337e-54 | -8.615850e-47 |
| Msa0071640 | Msa0075370 | -0.824535 | 7.660175e-54 | -8.615850e-47 |
| Msa0072590 | Msa0075370 | 0.866241 | 3.292609e-65 | -8.615850e-47 |
| Msa0075370 | Msa0079320 | 0.834778 | 2.462482e-56 | -8.615850e-47 |
| Msa0075370 | Msa0079570 | 0.822377 | 2.447203e-53 | -8.615850e-47 |
| Msa0075370 | Msa0081700 | 0.854463 | 1.210222e-61 | -8.615850e-47 |
| Msa0075370 | Msa0083200 | 0.857156 | 1.977292e-62 | -8.615850e-47 |
| Msa0075370 | Msa0094900 | 0.809713 | 1.651456e-50 | -8.615850e-47 |
| Msa0075370 | Msa0095550 | 0.891036 | 5.731201e-74 | -8.615850e-47 |
| Msa0075370 | Msa0098750 | 0.817239 | 3.655998e-52 | -8.615850e-47 |
| Msa0075370 | Msa0099090 | 0.849978 | 2.284380e-60 | -8.615850e-47 |
| Msa0075370 | Msa0106810 | 0.817473 | 3.237522e-52 | -8.615850e-47 |
| Msa0075370 | Msa0123310 | 0.934576 | 3.261051e-96 | -8.615850e-47 |
| Msa0075370 | Msa0127240 | 0.821606 | 3.692285e-53 | -8.615850e-47 |
| Msa0075370 | Msa0127910 | 0.812186 | 4.810996e-51 | -8.615850e-47 |
| Msa0075370 | Msa0136360 | 0.814792 | 1.286179e-51 | -8.615850e-47 |
| Msa0075370 | Msa0138380 | 0.822685 | 2.075641e-53 | -8.615850e-47 |
| Msa0075370 | Msa0139280 | 0.839659 | 1.388115e-57 | -8.615850e-47 |
| Msa0075370 | Msa0153290 | 0.839283 | 1.738618e-57 | -8.615850e-47 |
| Msa0075370 | Msa0167800 | 0.945115 | 5.578386e-104 | -8.615850e-47 |
| Msa0075370 | Msa0169710 | -0.804543 | 2.053516e-49 | -8.615850e-47 |
| Msa0075370 | Msa0172110 | 0.843250 | 1.572586e-58 | -8.615850e-47 |
| Msa0075370 | Msa0172290 | 0.820038 | 8.468978e-53 | -8.615850e-47 |
| Msa0075370 | Msa0174060 | 0.836372 | 9.726877e-57 | -8.615850e-47 |
| Msa0075370 | Msa0176610 | 0.813481 | 2.503944e-51 | -8.615850e-47 |
| Msa0075370 | Msa0178440 | 0.806219 | 9.150010e-50 | -8.615850e-47 |
| Msa0075370 | Msa0183840 | -0.823204 | 1.570658e-53 | -8.615850e-47 |
| Msa0075370 | Msa0186380 | 0.816864 | 4.439042e-52 | -8.615850e-47 |
| Msa0075370 | Msa0192890 | -0.803620 | 3.195137e-49 | -8.615850e-47 |
| Msa0075370 | Msa0195030 | -0.826935 | 2.064068e-54 | -8.615850e-47 |
| Msa0075370 | Msa0198140 | 0.828584 | 8.289974e-55 | -8.615850e-47 |
| Msa0075370 | Msa0198220 | 0.825132 | 5.536116e-54 | -8.615850e-47 |
| Msa0075370 | Msa0223500 | 0.803941 | 2.740655e-49 | -8.615850e-47 |
| Msa0075370 | Msa0226580 | 0.827318 | 1.671830e-54 | -8.615850e-47 |
| Msa0075370 | Msa0227970 | 0.815605 | 8.487843e-52 | -8.615850e-47 |
| Msa0075370 | Msa0228360 | 0.837710 | 4.427224e-57 | -8.615850e-47 |
| Msa0075370 | Msa0232660 | 0.815160 | 1.065677e-51 | -8.615850e-47 |
| Msa0075370 | Msa0237180 | -0.836199 | 1.076188e-56 | -8.615850e-47 |
| Msa0075370 | Msa0240460 | 0.822839 | 1.910647e-53 | -8.615850e-47 |
| Msa0075370 | Msa0249670 | 0.800762 | 1.237844e-48 | -8.615850e-47 |
| Msa0075370 | Msa0258280 | 0.831390 | 1.715194e-55 | -8.615850e-47 |
| Msa0075370 | Msa0264580 | 0.811154 | 8.066729e-51 | -8.615850e-47 |
| Msa0075370 | Msa0274940 | -0.811108 | 8.254199e-51 | -8.615850e-47 |
| Msa0075370 | Msa0278340 | 0.825891 | 3.660494e-54 | -8.615850e-47 |
| Msa0075370 | Msa0281330 | -0.809154 | 2.177047e-50 | -8.615850e-47 |
| Msa0075370 | Msa0281370 | -0.825464 | 4.621953e-54 | -8.615850e-47 |
| Msa0075370 | Msa0295030 | 0.800939 | 1.138912e-48 | -8.615850e-47 |
| Msa0075370 | Msa0297320 | 0.812608 | 3.892614e-51 | -8.615850e-47 |
| Msa0075370 | Msa0304350 | 0.828566 | 8.370761e-55 | -8.615850e-47 |
| Msa0075370 | Msa0305910 | 0.829468 | 5.061645e-55 | -8.615850e-47 |
| Msa0075370 | Msa0307430 | -0.814141 | 1.792028e-51 | -8.615850e-47 |
| Msa0075370 | Msa0313060 | -0.803764 | 2.983921e-49 | -8.615850e-47 |
| Msa0075370 | Msa0315660 | -0.831298 | 1.806992e-55 | -8.615850e-47 |
| Msa0075370 | Msa0328790 | 0.814430 | 1.547214e-51 | -8.615850e-47 |
| Msa0075370 | Msa0339970 | 0.811099 | 8.293250e-51 | -8.615850e-47 |
| Msa0075370 | Msa0340830 | 0.824366 | 8.393165e-54 | -8.615850e-47 |
| Msa0075370 | Msa0340870 | 0.824015 | 1.014635e-53 | -8.615850e-47 |
| Msa0075370 | Msa0362440 | 0.846710 | 1.830407e-59 | -8.615850e-47 |
| Msa0075370 | Msa0370350 | 0.901725 | 2.003904e-78 | -8.615850e-47 |
| Msa0075370 | Msa0378620 | 0.818847 | 1.582857e-52 | -8.615850e-47 |
| Msa0075370 | Msa0378920 | 0.817258 | 3.619197e-52 | -8.615850e-47 |
| Msa0075370 | Msa0384130 | 0.835893 | 1.287228e-56 | -8.615850e-47 |
| Msa0075370 | Msa0384330 | 0.807056 | 6.091228e-50 | -8.615850e-47 |
| Msa0075370 | Msa0385870 | 0.810886 | 9.220343e-51 | -8.615850e-47 |
| Msa0075370 | Msa0390590 | 0.815488 | 9.010065e-52 | -8.615850e-47 |
| Msa0075370 | Msa0412480 | 0.802484 | 5.487935e-49 | -8.615850e-47 |
| Msa0075370 | Msa0415910 | 0.809629 | 1.721359e-50 | -8.615850e-47 |
| Msa0075370 | Msa0417850 | 0.883998 | 2.789233e-71 | -8.615850e-47 |
| Msa0075370 | Msa0426680 | 0.805912 | 1.061298e-49 | -8.615850e-47 |
| Msa0075370 | Msa0427890 | 0.805473 | 1.312273e-49 | -8.615850e-47 |
| Msa0075370 | Msa0432260 | 0.817009 | 4.118434e-52 | -8.615850e-47 |
| Msa0075370 | Msa0434840 | 0.832686 | 8.206309e-56 | -8.615850e-47 |
| Msa0075370 | Msa0476730 | 0.810322 | 1.221312e-50 | -8.615850e-47 |
| Msa0075370 | Msa0478660 | 0.813171 | 2.928995e-51 | -8.615850e-47 |
| Msa0075370 | Msa0478750 | 0.848309 | 6.654063e-60 | -8.615850e-47 |
| Msa0075370 | Msa0480940 | -0.808606 | 2.851453e-50 | -8.615850e-47 |
| Msa0075370 | Msa0483090 | 0.844416 | 7.664118e-59 | -8.615850e-47 |
| Msa0075370 | Msa0483160 | 0.849942 | 2.338317e-60 | -8.615850e-47 |
| Msa0075370 | Msa0502900 | 0.803152 | 3.995163e-49 | -8.615850e-47 |
| Msa0075370 | Msa0521100 | 0.805817 | 1.111480e-49 | -8.615850e-47 |
| Msa0075370 | Msa0522730 | 0.813578 | 2.384272e-51 | -8.615850e-47 |
| Msa0075370 | Msa0522830 | 0.844991 | 5.364750e-59 | -8.615850e-47 |
| Msa0075370 | Msa0523400 | 0.817835 | 2.682890e-52 | -8.615850e-47 |
| Msa0075370 | Msa0526490 | 0.836601 | 8.502659e-57 | -8.615850e-47 |
| Msa0075370 | Msa0526500 | 0.801883 | 7.297250e-49 | -8.615850e-47 |
| Msa0075370 | Msa0538050 | 0.808510 | 2.989933e-50 | -8.615850e-47 |
| Msa0075370 | Msa0540120 | 0.828350 | 9.440345e-55 | -8.615850e-47 |
| Msa0075370 | Msa0540160 | 0.846104 | 2.678845e-59 | -8.615850e-47 |
| Msa0075370 | Msa0545750 | 0.821278 | 4.396865e-53 | -8.615850e-47 |
| Msa0075370 | Msa0549550 | 0.823307 | 1.486202e-53 | -8.615850e-47 |
| Msa0075370 | Msa0553940 | 0.815708 | 8.050954e-52 | -8.615850e-47 |
| Msa0075370 | Msa0555510 | 0.819293 | 1.253262e-52 | -8.615850e-47 |
| Msa0075370 | Msa0559440 | 0.842317 | 2.783812e-58 | -8.615850e-47 |
| Msa0075370 | Msa0559640 | 0.831266 | 1.840189e-55 | -8.615850e-47 |
| Msa0075370 | Msa0563230 | 0.803928 | 2.758074e-49 | -8.615850e-47 |
| Msa0075370 | Msa0577960 | 0.826349 | 2.848524e-54 | -8.615850e-47 |
| Msa0075370 | Msa0601470 | 0.810242 | 1.270779e-50 | -8.615850e-47 |
| Msa0075370 | Msa0604890 | 0.828955 | 6.742811e-55 | -8.615850e-47 |
| Msa0075370 | Msa0608940 | 0.808692 | 2.732843e-50 | -8.615850e-47 |
| Msa0075370 | Msa0617470 | 0.827058 | 1.928964e-54 | -8.615850e-47 |
| Msa0075370 | Msa0619300 | -0.819639 | 1.044984e-52 | -8.615850e-47 |
| Msa0075370 | Msa0623360 | 0.809772 | 1.603817e-50 | -8.615850e-47 |
| Msa0075370 | Msa0625550 | 0.828129 | 1.067042e-54 | -8.615850e-47 |
| Msa0075370 | Msa0625900 | 0.803238 | 3.834093e-49 | -8.615850e-47 |
| Msa0075370 | Msa0635070 | 0.824611 | 7.349265e-54 | -8.615850e-47 |
| Msa0075370 | Msa0646180 | 0.843345 | 1.483903e-58 | -8.615850e-47 |
| Msa0075370 | Msa0649530 | 0.825758 | 3.937207e-54 | -8.615850e-47 |
| Msa0075370 | Msa0654400 | 0.800008 | 1.762667e-48 | -8.615850e-47 |
| Msa0075370 | Msa0654500 | 0.810810 | 9.580620e-51 | -8.615850e-47 |
| Msa0075370 | Msa0654570 | 0.816052 | 6.746478e-52 | -8.615850e-47 |
| Msa0075370 | Msa0663690 | 0.804342 | 2.261620e-49 | -8.615850e-47 |
| Msa0075370 | Msa0665010 | 0.809235 | 2.091403e-50 | -8.615850e-47 |
| Msa0075370 | Msa0674680 | 0.838868 | 2.226805e-57 | -8.615850e-47 |
| Msa0075370 | Msa0680550 | 0.804810 | 1.806464e-49 | -8.615850e-47 |
| Msa0075370 | Msa0687320 | 0.808150 | 3.566861e-50 | -8.615850e-47 |
| Msa0075370 | Msa0690920 | 0.813506 | 2.473263e-51 | -8.615850e-47 |
| Msa0075370 | Msa0691740 | 0.824893 | 6.305122e-54 | -8.615850e-47 |
| Msa0075370 | Msa0700250 | 0.827046 | 1.941734e-54 | -8.615850e-47 |
| Msa0075370 | Msa0704690 | -0.812459 | 4.194023e-51 | -8.615850e-47 |
| Msa0075370 | Msa0708840 | 0.817523 | 3.155290e-52 | -8.615850e-47 |
| Msa0075370 | Msa0714060 | 0.815538 | 8.782980e-52 | -8.615850e-47 |
| Msa0075370 | Msa0714200 | 0.804675 | 1.927316e-49 | -8.615850e-47 |
| Msa0075370 | Msa0722660 | 0.861531 | 9.608504e-64 | -8.615850e-47 |
| Msa0075370 | Msa0741600 | 0.813608 | 2.348415e-51 | -8.615850e-47 |
| Msa0075370 | Msa0742690 | 0.842919 | 1.927300e-58 | -8.615850e-47 |
| Msa0075370 | Msa0768240 | 0.802304 | 5.978251e-49 | -8.615850e-47 |
| Msa0075370 | Msa0779830 | 0.855678 | 5.368453e-62 | -8.615850e-47 |
| Msa0075370 | Msa0783680 | -0.804134 | 2.499577e-49 | -8.615850e-47 |
| Msa0075370 | Msa0827560 | 0.849284 | 3.568686e-60 | -8.615850e-47 |
| Msa0075370 | Msa0829770 | 0.815005 | 1.153518e-51 | -8.615850e-47 |
| Msa0075370 | Msa0831460 | 0.810662 | 1.030979e-50 | -8.615850e-47 |
| Msa0075370 | Msa0834220 | -0.804274 | 2.336691e-49 | -8.615850e-47 |
| Msa0075370 | Msa0854520 | 0.800435 | 1.442953e-48 | -8.615850e-47 |
| Msa0075370 | Msa0862750 | 0.842186 | 3.015561e-58 | -8.615850e-47 |
| Msa0075370 | Msa0869320 | 0.801166 | 1.023512e-48 | -8.615850e-47 |
| Msa0075370 | Msa0870220 | 0.822673 | 2.089232e-53 | -8.615850e-47 |
| Msa0075370 | Msa0872800 | 0.803253 | 3.807387e-49 | -8.615850e-47 |
| Msa0075370 | Msa0903460 | 0.827640 | 1.399293e-54 | -8.615850e-47 |
| Msa0075370 | Msa0906100 | 0.821400 | 4.119088e-53 | -8.615850e-47 |
| Msa0075370 | Msa0934290 | 0.816197 | 6.261538e-52 | -8.615850e-47 |
| Msa0075370 | Msa0935930 | 0.830306 | 3.164068e-55 | -8.615850e-47 |
| Msa0075370 | Msa0967250 | 0.806632 | 7.485430e-50 | -8.615850e-47 |
| Msa0075370 | Msa0971780 | 0.806517 | 7.917048e-50 | -8.615850e-47 |
| Msa0075370 | Msa0972930 | 0.822964 | 1.787355e-53 | -8.615850e-47 |
| Msa0075370 | Msa1016450 | 0.805034 | 1.621705e-49 | -8.615850e-47 |
| Msa0075370 | Msa1039150 | 0.818139 | 2.291267e-52 | -8.615850e-47 |
| Msa0075370 | Msa1042420 | 0.826358 | 2.833790e-54 | -8.615850e-47 |
| Msa0075370 | Msa1057940 | 0.806790 | 6.931255e-50 | -8.615850e-47 |
| Msa0075370 | Msa1078210 | 0.815381 | 9.518588e-52 | -8.615850e-47 |
| Msa0075370 | Msa1078280 | 0.830742 | 2.474977e-55 | -8.615850e-47 |
| Msa0075370 | Msa1083660 | 0.808863 | 2.512396e-50 | -8.615850e-47 |
| Msa0075370 | Msa1090020 | 0.825189 | 5.369608e-54 | -8.615850e-47 |
| Msa0075370 | Msa1093190 | 0.805334 | 1.403295e-49 | -8.615850e-47 |
| Msa0075370 | Msa1098570 | 0.806630 | 7.494941e-50 | -8.615850e-47 |
| Msa0075370 | Msa1112230 | 0.807608 | 4.651634e-50 | -8.615850e-47 |
| Msa0075370 | Msa1115500 | 0.820983 | 5.141033e-53 | -8.615850e-47 |
| Msa0075370 | Msa1123440 | 0.805821 | 1.109110e-49 | -8.615850e-47 |
| Msa0075370 | Msa1123490 | 0.807574 | 4.730398e-50 | -8.615850e-47 |
| Msa0075370 | Msa1136880 | -0.811697 | 6.151037e-51 | -8.615850e-47 |
| Msa0075370 | Msa1138730 | 0.840610 | 7.840126e-58 | -8.615850e-47 |
| Msa0075370 | Msa1147600 | 0.819170 | 1.336743e-52 | -8.615850e-47 |
| Msa0075370 | Msa1155380 | 0.831523 | 1.590604e-55 | -8.615850e-47 |
| Msa0075370 | Msa1160470 | 0.800977 | 1.118823e-48 | -8.615850e-47 |
| Msa0075370 | Msa1164830 | 0.828277 | 9.828500e-55 | -8.615850e-47 |
| Msa0075370 | Msa1169780 | 0.850823 | 1.323436e-60 | -8.615850e-47 |
| Msa0075370 | Msa1181370 | 0.809429 | 1.900743e-50 | -8.615850e-47 |
| Msa0075370 | Msa1186010 | 0.809039 | 2.303800e-50 | -8.615850e-47 |
| Msa0075370 | Msa1194480 | 0.808737 | 2.674135e-50 | -8.615850e-47 |
| Msa0075370 | Msa1203090 | 0.820931 | 5.284620e-53 | -8.615850e-47 |
| Msa0075370 | Msa1203210 | 0.825847 | 3.749684e-54 | -8.615850e-47 |
| Msa0075370 | Msa1207880 | -0.807689 | 4.471481e-50 | -8.615850e-47 |
| Msa0075370 | Msa1213470 | 0.806964 | 6.369965e-50 | -8.615850e-47 |
| Msa0075370 | Msa1215660 | 0.842890 | 1.961845e-58 | -8.615850e-47 |
| Msa0075370 | Msa1235960 | 0.800822 | 1.203479e-48 | -8.615850e-47 |
| Msa0075370 | Msa1235990 | 0.805982 | 1.026380e-49 | -8.615850e-47 |
| Msa0075370 | Msa1240240 | 0.818668 | 1.738755e-52 | -8.615850e-47 |
| Msa0075370 | Msa1255500 | 0.811714 | 6.096888e-51 | -8.615850e-47 |
| Msa0075370 | Msa1263610 | 0.814595 | 1.422013e-51 | -8.615850e-47 |
| Msa0075370 | Msa1295840 | 0.840326 | 9.300789e-58 | -8.615850e-47 |
| Msa0075370 | Msa1299220 | -0.807251 | 5.537011e-50 | -8.615850e-47 |
| Msa0075370 | Msa1300370 | 0.808285 | 3.339425e-50 | -8.615850e-47 |
| Msa0075370 | Msa1301410 | 0.829774 | 4.265589e-55 | -8.615850e-47 |
| Msa0075370 | Msa1307110 | 0.816222 | 6.180790e-52 | -8.615850e-47 |
| Msa0075370 | Msa1316090 | 0.802134 | 6.479120e-49 | -8.615850e-47 |
| Msa0075370 | Msa1320100 | 0.801262 | 9.784960e-49 | -8.615850e-47 |
| Msa0075370 | Msa1320660 | 0.844510 | 7.230960e-59 | -8.615850e-47 |
| Msa0075370 | Msa1359880 | 0.842137 | 3.106071e-58 | -8.615850e-47 |
| Msa0075370 | Msa1363270 | 0.827393 | 1.603792e-54 | -8.615850e-47 |
| Msa0075370 | Msa1363280 | 0.804460 | 2.137228e-49 | -8.615850e-47 |
| Msa0075370 | Msa1374210 | 0.834403 | 3.058427e-56 | -8.615850e-47 |
| Msa0075370 | Msa1381300 | 0.819125 | 1.368890e-52 | -8.615850e-47 |
| Msa0075370 | Msa1381870 | 0.828039 | 1.122134e-54 | -8.615850e-47 |
| Msa0075370 | Msa1388270 | 0.810762 | 9.812050e-51 | -8.615850e-47 |
| Msa0075370 | Msa1392570 | 0.838490 | 2.788822e-57 | -8.615850e-47 |
| Msa0075370 | Msa1392650 | 0.807830 | 4.172919e-50 | -8.615850e-47 |
| Msa0075370 | Msa1395700 | 0.833443 | 5.318152e-56 | -8.615850e-47 |
| Msa0075370 | Msa1398310 | 0.889455 | 2.385739e-73 | -8.615850e-47 |
| Msa0075370 | Msa1412450 | 0.804621 | 1.978431e-49 | -8.615850e-47 |
| Msa0075370 | Msa1412800 | 0.817484 | 3.220626e-52 | -8.615850e-47 |
| Msa0075370 | Msa1414560 | 0.803517 | 3.356444e-49 | -8.615850e-47 |
| Msa0075370 | Msa1421520 | 0.818236 | 2.177418e-52 | -8.615850e-47 |
| Msa0075370 | Msa1426690 | 0.836950 | 6.928350e-57 | -8.615850e-47 |
| Msa0075370 | Msa1427900 | 0.813335 | 2.696817e-51 | -8.615850e-47 |
| Msa0075370 | Msa1433060 | 0.835937 | 1.254481e-56 | -8.615850e-47 |
| Msa0075370 | Msa1448410 | 0.809128 | 2.204986e-50 | -8.615850e-47 |
| Msa0075370 | Msa1448840 | 0.811454 | 6.943393e-51 | -8.615850e-47 |
| Msa0075370 | Msa1465700 | -0.804308 | 2.299548e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0075370 | MtrunA17_Chr1g0183881 | 96.499 | 457 | 16 | 0 | 1 | 457 | 1 | 457 | 0.0 | 906 |
| Msa0075370 | MtrunA17_Chr2g0293201 | 44.416 | 394 | 192 | 5 | 91 | 457 | 64 | 457 | 4.70e-117 | 351 |
| Msa0075370 | MtrunA17_Chr8g0385291 | 44.606 | 343 | 176 | 6 | 120 | 457 | 158 | 491 | 7.37e-97 | 300 |
| Msa0075370 | MtrunA17_Chr4g0014901 | 40.054 | 372 | 199 | 10 | 101 | 457 | 222 | 584 | 6.11e-89 | 283 |
| Msa0075370 | MtrunA17_Chr3g0131071 | 40.469 | 341 | 190 | 7 | 118 | 451 | 221 | 555 | 1.65e-84 | 271 |
| Msa0075370 | MtrunA17_Chr4g0004981 | 37.982 | 337 | 195 | 6 | 129 | 457 | 107 | 437 | 5.77e-80 | 255 |
| Msa0075370 | MtrunA17_Chr4g0014911 | 41.420 | 338 | 186 | 5 | 128 | 457 | 121 | 454 | 2.09e-76 | 246 |
| Msa0075370 | MtrunA17_Chr7g0243541 | 31.304 | 345 | 185 | 6 | 118 | 457 | 87 | 384 | 9.37e-53 | 182 |
| Msa0075370 | MtrunA17_Chr3g0131581 | 28.054 | 221 | 130 | 9 | 142 | 353 | 62 | 262 | 1.96e-12 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0075370 | AT1G30690.1 | 45.808 | 334 | 171 | 5 | 128 | 457 | 201 | 528 | 1.23e-100 | 312 |
| Msa0075370 | AT1G30690.2 | 45.808 | 334 | 171 | 5 | 128 | 457 | 201 | 528 | 1.23e-100 | 312 |
| Msa0075370 | AT4G09160.2 | 44.838 | 339 | 167 | 6 | 131 | 457 | 301 | 631 | 2.43e-90 | 288 |
| Msa0075370 | AT4G09160.3 | 44.838 | 339 | 167 | 6 | 131 | 457 | 301 | 631 | 2.62e-90 | 288 |
| Msa0075370 | AT4G09160.1 | 44.838 | 339 | 167 | 6 | 131 | 457 | 326 | 656 | 3.31e-90 | 288 |
| Msa0075370 | AT1G72160.1 | 38.667 | 375 | 205 | 6 | 91 | 457 | 124 | 481 | 3.03e-83 | 265 |
| Msa0075370 | AT3G51670.1 | 40.060 | 332 | 188 | 6 | 132 | 457 | 69 | 395 | 4.17e-79 | 252 |
| Msa0075370 | AT1G22530.2 | 34.670 | 349 | 207 | 9 | 120 | 457 | 303 | 641 | 1.43e-64 | 220 |
| Msa0075370 | AT1G22530.1 | 34.957 | 349 | 206 | 9 | 120 | 457 | 337 | 675 | 2.75e-64 | 220 |
| Msa0075370 | AT1G72150.1 | 33.134 | 335 | 205 | 8 | 131 | 457 | 243 | 566 | 3.24e-58 | 201 |
Find 98 sgRNAs with CRISPR-Local
Find 314 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTATTGAGTAAATTCTTAA+AGG | 0.181542 | 1_2:+50527942 | Msa0075370:CDS |
| AAAATTCAAGAAGCAATTAT+TGG | 0.227229 | 1_2:+50527796 | Msa0075370:CDS |
| TTGTTAGGTGAAGGAGAAAA+AGG | 0.245387 | 1_2:+50527826 | Msa0075370:CDS |
| ATCTTAGAGATATTACATTA+TGG | 0.248604 | 1_2:+50527875 | Msa0075370:CDS |
| TAAAATTCTTGATGAAGATT+TGG | 0.250588 | 1_2:+50528041 | Msa0075370:CDS |
| TGGTGTTGATGGAATTATTC+AGG | 0.274026 | 1_2:+50528260 | Msa0075370:CDS |
| ATAGTAATAACAGTTGAAAA+TGG | 0.282119 | 1_2:+50529579 | Msa0075370:CDS |
| AGCTCTTTCATTCCTTGAAT+TGG | 0.286220 | 1_2:-50528303 | None:intergenic |
| TTGTAGTAAATGCACCATTT+TGG | 0.309402 | 1_2:+50528576 | Msa0075370:CDS |
| TTCTGGCAAATTCTCGTTGC+CGG | 0.319245 | 1_2:+50527510 | Msa0075370:CDS |
| ATTATTGGAAAATATTTGTT+AGG | 0.321956 | 1_2:+50527811 | Msa0075370:CDS |
| AAAATTCTTGATGAAGATTT+GGG | 0.329182 | 1_2:+50528042 | Msa0075370:CDS |
| AAGAAACTTGTTATGATTTG+TGG | 0.333859 | 1_2:-50527429 | None:intergenic |
| GCTCAACTCCGTCAGCAAAA+AGG | 0.352272 | 1_2:+50528323 | Msa0075370:CDS |
| AGAGGGTGCAGAGGATGGGG+AGG | 0.358125 | 1_2:-50527473 | None:intergenic |
| TTGTATGAACATTCATCATT+TGG | 0.366571 | 1_2:-50529483 | None:intergenic |
| ACGAGAATTTGCCAGAAAAC+TGG | 0.369041 | 1_2:-50527504 | None:intergenic |
| TCTTAGAGATATTACATTAT+GGG | 0.371202 | 1_2:+50527876 | Msa0075370:CDS |
| TGTGCCCTACTTGGTAATAA+AGG | 0.371867 | 1_2:-50527904 | None:intergenic |
| GAGATGGAGGATTCAATTGA+TGG | 0.376525 | 1_2:+50528206 | Msa0075370:CDS |
| AATTTGTACAAGAAGACATT+TGG | 0.376644 | 1_2:+50528156 | Msa0075370:CDS |
| GAGCATCTTCCAGCTGGATA+TGG | 0.380972 | 1_2:+50528800 | Msa0075370:CDS |
| GACACTCACCTGAGAAGAAT+TGG | 0.395803 | 1_2:-50528686 | None:intergenic |
| AATTTCATGTTGGTAGCTTC+TGG | 0.400803 | 1_2:-50529735 | None:intergenic |
| GCAGAGGATGGGGAGGGATC+AGG | 0.403068 | 1_2:-50527466 | None:intergenic |
| AGCCTAATCTCTGCAGGACT+TGG | 0.407088 | 1_2:-50527739 | None:intergenic |
| CAGCTGGATATGGTGGTCTA+AGG | 0.408968 | 1_2:+50528810 | Msa0075370:CDS |
| TATCCAGCTGGAAGATGCTC+TGG | 0.411235 | 1_2:-50528797 | None:intergenic |
| CTACAAAACCAAAGTGTTGT+TGG | 0.411528 | 1_2:+50529513 | Msa0075370:CDS |
| AGCTACCAACATGAAATTGA+TGG | 0.418460 | 1_2:+50529740 | Msa0075370:CDS |
| TTGAAAAGTGCACCAATTCA+AGG | 0.425968 | 1_2:+50528291 | Msa0075370:CDS |
| TGTGAAGTGTAGAGCCAAAA+TGG | 0.434368 | 1_2:-50528590 | None:intergenic |
| CAAGAGAAAGAAATCATTGT+TGG | 0.439581 | 1_2:+50527762 | Msa0075370:CDS |
| TAGTAATAACAGTTGAAAAT+GGG | 0.440697 | 1_2:+50529580 | Msa0075370:CDS |
| TGTTACAGAAGACATTGGTT+TGG | 0.442089 | 1_2:+50527998 | Msa0075370:CDS |
| TGGAAGAGGGTGCAGAGGAT+GGG | 0.446081 | 1_2:-50527477 | None:intergenic |
| AGAAAACTGGAGCATGGAAG+AGG | 0.447135 | 1_2:-50527491 | None:intergenic |
| TGCTCTAAAACTTTATCATC+AGG | 0.448465 | 1_2:-50528857 | None:intergenic |
| CTCTTGAGCCTAATCTCTGC+AGG | 0.448756 | 1_2:-50527745 | None:intergenic |
| GGAAAATATTTGTTAGGTGA+AGG | 0.449552 | 1_2:+50527817 | Msa0075370:CDS |
| ATGGAAGAGGGTGCAGAGGA+TGG | 0.462405 | 1_2:-50527478 | None:intergenic |
| CGTTGCCGGAAAATCCGATC+AGG | 0.466677 | 1_2:+50527524 | Msa0075370:CDS |
| AGAATTGGTGTGACCCTTTG+TGG | 0.480253 | 1_2:-50528671 | None:intergenic |
| GGCCCAGAGCATCTTCCAGC+TGG | 0.482220 | 1_2:+50528794 | Msa0075370:CDS |
| TAGTGATGTGGAACGAGAAT+TGG | 0.486000 | 1_2:+50527693 | Msa0075370:CDS |
| CTCATGGCCTCTTCCCTGAT+CGG | 0.487905 | 1_2:-50527538 | None:intergenic |
| TGGGGAGGGATCAGGAAAGA+TGG | 0.488831 | 1_2:-50527458 | None:intergenic |
| GGAAGAGGGTGCAGAGGATG+GGG | 0.492693 | 1_2:-50527476 | None:intergenic |
| GTACCTTCATGTGCCCTACT+TGG | 0.493972 | 1_2:-50527913 | None:intergenic |
| ATATTTGGATAGTAGAGATA+AGG | 0.496144 | 1_2:+50528086 | Msa0075370:CDS |
| ACTGTTATTACTATCTTCCC+TGG | 0.497920 | 1_2:-50529570 | None:intergenic |
| TTGTTGAGCACCTCATTGAC+TGG | 0.499653 | 1_2:-50528917 | None:intergenic |
| GTGTTCCTTTATTACCAAGT+AGG | 0.502140 | 1_2:+50527899 | Msa0075370:CDS |
| TGACCCTTTGTGGTCTTGCA+AGG | 0.502712 | 1_2:-50528661 | None:intergenic |
| TGCTGTCACCAACAACACTT+TGG | 0.503098 | 1_2:-50529521 | None:intergenic |
| TGTTCCTTTATTACCAAGTA+GGG | 0.503280 | 1_2:+50527900 | Msa0075370:CDS |
| GGGTCACACCAATTCTTCTC+AGG | 0.506747 | 1_2:+50528678 | Msa0075370:CDS |
| CACCAAGTCCTGCAGAGATT+AGG | 0.512586 | 1_2:+50527737 | Msa0075370:CDS |
| CATCCTTGCAAGACCACAAA+GGG | 0.520308 | 1_2:+50528658 | Msa0075370:CDS |
| CTTCACAAGTGTTATTCTCA+AGG | 0.523067 | 1_2:+50528606 | Msa0075370:CDS |
| ATGAAATGTCACAGGTACAT+AGG | 0.530202 | 1_2:+50528773 | Msa0075370:intron |
| TTGGTTGATGATGATGAGGT+AGG | 0.531055 | 1_2:+50527712 | Msa0075370:CDS |
| ATGTGGGACATAACTGTTGT+TGG | 0.536809 | 1_2:+50529429 | Msa0075370:CDS |
| GGAAAATCCGATCAGGGAAG+AGG | 0.541733 | 1_2:+50527531 | Msa0075370:CDS |
| CTTAGAGATATTACATTATG+GGG | 0.542377 | 1_2:+50527877 | Msa0075370:CDS |
| ATGTTCATCATTGCATTCAT+CGG | 0.544558 | 1_2:-50527566 | None:intergenic |
| GGACATAACTGTTGTTGGAT+GGG | 0.553153 | 1_2:+50529434 | Msa0075370:CDS |
| GCATTCATCGGTATCACTCA+TGG | 0.553380 | 1_2:-50527554 | None:intergenic |
| TGGTTGATGATGATGAGGTA+GGG | 0.556544 | 1_2:+50527713 | Msa0075370:CDS |
| TCGTAAACATAGTAACAAAC+CGG | 0.557690 | 1_2:-50528117 | None:intergenic |
| TAGAGATAAGGAAGGTCGAC+CGG | 0.565192 | 1_2:+50528098 | Msa0075370:CDS |
| CTTAGACCACCATATCCAGC+TGG | 0.567452 | 1_2:-50528809 | None:intergenic |
| CATCTTCCAGCTGGATATGG+TGG | 0.574311 | 1_2:+50528803 | Msa0075370:CDS |
| ATCCAGCTGGAAGATGCTCT+GGG | 0.577545 | 1_2:-50528796 | None:intergenic |
| TTCTGCCATCAATTTCATGT+TGG | 0.581698 | 1_2:-50529745 | None:intergenic |
| TGACATGTTACAGAAGACAT+TGG | 0.594854 | 1_2:+50527993 | Msa0075370:CDS |
| CTGGATATGGTGGTCTAAGG+AGG | 0.598272 | 1_2:+50528813 | Msa0075370:CDS |
| TGGATGGGAGGTGATTTACA+AGG | 0.598715 | 1_2:+50529449 | Msa0075370:CDS |
| GAGGGTGCAGAGGATGGGGA+GGG | 0.602354 | 1_2:-50527472 | None:intergenic |
| TTTGCCAGAAAACTGGAGCA+TGG | 0.611039 | 1_2:-50527497 | None:intergenic |
| AGACTGGAGTGACAATAATG+TGG | 0.612074 | 1_2:+50529412 | Msa0075370:intron |
| CATAACTGTTGTTGGATGGG+AGG | 0.613416 | 1_2:+50529437 | Msa0075370:CDS |
| GACTGGAGTGACAATAATGT+GGG | 0.615833 | 1_2:+50529413 | Msa0075370:intron |
| GGGACATAACTGTTGTTGGA+TGG | 0.617419 | 1_2:+50529433 | Msa0075370:CDS |
| GAAAACTGGAGCATGGAAGA+GGG | 0.617854 | 1_2:-50527490 | None:intergenic |
| AGTTGAATTTCCAGTCAATG+AGG | 0.619748 | 1_2:+50528907 | Msa0075370:CDS |
| GTTGTTTCAAAGCTACTACC+CGG | 0.624631 | 1_2:+50528353 | Msa0075370:CDS |
| TTGGATAGTAGAGATAAGGA+AGG | 0.628322 | 1_2:+50528090 | Msa0075370:CDS |
| TTACCAAGTAGGGCACATGA+AGG | 0.629064 | 1_2:+50527910 | Msa0075370:CDS |
| TCATGATCTTGTTAGTGATG+TGG | 0.637441 | 1_2:+50527681 | Msa0075370:CDS |
| TCAAATAAGACTTCTCAATG+AGG | 0.647516 | 1_2:+50527630 | Msa0075370:CDS |
| GAGCATGGAAGAGGGTGCAG+AGG | 0.648042 | 1_2:-50527482 | None:intergenic |
| GTTGCCGGAAAATCCGATCA+GGG | 0.653037 | 1_2:+50527525 | Msa0075370:CDS |
| TCATCCTTGCAAGACCACAA+AGG | 0.655234 | 1_2:+50528657 | Msa0075370:CDS |
| GGTTTGTTACTATGTTTACG+AGG | 0.673551 | 1_2:+50528119 | Msa0075370:CDS |
| AGAATTGGTTGATGATGATG+AGG | 0.676048 | 1_2:+50527708 | Msa0075370:CDS |
| GATGAATGCAATGATGAACA+TGG | 0.677939 | 1_2:+50527568 | Msa0075370:CDS |
| ATGAATGCAATGATGAACAT+GGG | 0.696221 | 1_2:+50527569 | Msa0075370:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATTGGAAAATATTTGTT+AGG | + | chr1_2:50527811-50527830 | Msa0075370:CDS | 15.0% |
| !!! | TGAATTTTATGTTATACTTA+AGG | - | chr1_2:50528711-50528730 | None:intergenic | 15.0% |
| !! | AATAGAGTAAATATCTAAAT+TGG | - | chr1_2:50529340-50529359 | None:intergenic | 15.0% |
| !! | AAAGAAATAAATTAGAACAA+AGG | - | chr1_2:50529383-50529402 | None:intergenic | 15.0% |
| !! | ATTATTGGAAAATATTTGTT+AGG | + | chr1_2:50527811-50527830 | Msa0075370:CDS | 15.0% |
| !!! | TGAATTTTATGTTATACTTA+AGG | - | chr1_2:50528711-50528730 | None:intergenic | 15.0% |
| !! | AATAGAGTAAATATCTAAAT+TGG | - | chr1_2:50529340-50529359 | None:intergenic | 15.0% |
| !! | AAAGAAATAAATTAGAACAA+AGG | - | chr1_2:50529383-50529402 | None:intergenic | 15.0% |
| !!! | AGATAATTTTTATGTGATGA+TGG | - | chr1_2:50527404-50527423 | None:intergenic | 20.0% |
| !!! | GATTTTCATTGAAATCTAAA+TGG | - | chr1_2:50527612-50527631 | None:intergenic | 20.0% |
| !! | AAAATTCAAGAAGCAATTAT+TGG | + | chr1_2:50527796-50527815 | Msa0075370:CDS | 20.0% |
| !! | ATCTTAGAGATATTACATTA+TGG | + | chr1_2:50527875-50527894 | Msa0075370:CDS | 20.0% |
| !! | TCTTAGAGATATTACATTAT+GGG | + | chr1_2:50527876-50527895 | Msa0075370:CDS | 20.0% |
| !! | TGTATTGAGTAAATTCTTAA+AGG | + | chr1_2:50527942-50527961 | Msa0075370:CDS | 20.0% |
| !! | TAAAATTCTTGATGAAGATT+TGG | + | chr1_2:50528041-50528060 | Msa0075370:CDS | 20.0% |
| !! | AAAATTCTTGATGAAGATTT+GGG | + | chr1_2:50528042-50528061 | Msa0075370:CDS | 20.0% |
| !!! | TTTTGAAAAAGTTGGATATT+TGG | + | chr1_2:50528071-50528090 | Msa0075370:CDS | 20.0% |
| !!! | ACATTTTTATAAACTATCTC+CGG | - | chr1_2:50528375-50528394 | None:intergenic | 20.0% |
| !!! | TTTTGTGTAAATATCAAATC+CGG | + | chr1_2:50529007-50529026 | Msa0075370:intron | 20.0% |
| !! | ATCATTGATATTATTCACTT+AGG | + | chr1_2:50529151-50529170 | Msa0075370:intron | 20.0% |
| !!! | AAATTGGTCTTTGAAATTAT+AGG | - | chr1_2:50529324-50529343 | None:intergenic | 20.0% |
| !! | ATAGTAATAACAGTTGAAAA+TGG | + | chr1_2:50529579-50529598 | Msa0075370:CDS | 20.0% |
| !! | TAGTAATAACAGTTGAAAAT+GGG | + | chr1_2:50529580-50529599 | Msa0075370:CDS | 20.0% |
| !!! | TATATTTTTTTGCATTCAGT+AGG | + | chr1_2:50529712-50529731 | Msa0075370:intron | 20.0% |
| !!! | AGATAATTTTTATGTGATGA+TGG | - | chr1_2:50527404-50527423 | None:intergenic | 20.0% |
| !!! | GATTTTCATTGAAATCTAAA+TGG | - | chr1_2:50527612-50527631 | None:intergenic | 20.0% |
| !! | AAAATTCAAGAAGCAATTAT+TGG | + | chr1_2:50527796-50527815 | Msa0075370:CDS | 20.0% |
| !! | ATCTTAGAGATATTACATTA+TGG | + | chr1_2:50527875-50527894 | Msa0075370:CDS | 20.0% |
| !! | TCTTAGAGATATTACATTAT+GGG | + | chr1_2:50527876-50527895 | Msa0075370:CDS | 20.0% |
| !! | TGTATTGAGTAAATTCTTAA+AGG | + | chr1_2:50527942-50527961 | Msa0075370:CDS | 20.0% |
| !! | TAAAATTCTTGATGAAGATT+TGG | + | chr1_2:50528041-50528060 | Msa0075370:CDS | 20.0% |
| !! | AAAATTCTTGATGAAGATTT+GGG | + | chr1_2:50528042-50528061 | Msa0075370:CDS | 20.0% |
| !!! | TTTTGAAAAAGTTGGATATT+TGG | + | chr1_2:50528071-50528090 | Msa0075370:CDS | 20.0% |
| !!! | ACATTTTTATAAACTATCTC+CGG | - | chr1_2:50528375-50528394 | None:intergenic | 20.0% |
| !!! | TTTTGTGTAAATATCAAATC+CGG | + | chr1_2:50529007-50529026 | Msa0075370:intron | 20.0% |
| !! | ATCATTGATATTATTCACTT+AGG | + | chr1_2:50529151-50529170 | Msa0075370:intron | 20.0% |
| !!! | AAATTGGTCTTTGAAATTAT+AGG | - | chr1_2:50529324-50529343 | None:intergenic | 20.0% |
| !! | ATAGTAATAACAGTTGAAAA+TGG | + | chr1_2:50529579-50529598 | Msa0075370:CDS | 20.0% |
| !! | TAGTAATAACAGTTGAAAAT+GGG | + | chr1_2:50529580-50529599 | Msa0075370:CDS | 20.0% |
| !!! | TATATTTTTTTGCATTCAGT+AGG | + | chr1_2:50529712-50529731 | Msa0075370:intron | 20.0% |
| !!! | AAGAAACTTGTTATGATTTG+TGG | - | chr1_2:50527432-50527451 | None:intergenic | 25.0% |
| ! | AGAAAAAATTTCATTGCCAA+AGG | + | chr1_2:50527849-50527868 | Msa0075370:CDS | 25.0% |
| !!! | ATATCTCTAAGATTTTCCTT+TGG | - | chr1_2:50527868-50527887 | None:intergenic | 25.0% |
| ! | CTTAGAGATATTACATTATG+GGG | + | chr1_2:50527877-50527896 | Msa0075370:CDS | 25.0% |
| ! | ATATTTGGATAGTAGAGATA+AGG | + | chr1_2:50528086-50528105 | Msa0075370:CDS | 25.0% |
| ! | AATTTGTACAAGAAGACATT+TGG | + | chr1_2:50528156-50528175 | Msa0075370:CDS | 25.0% |
| !!! | ATTAAGAAGTTGAGTTTTAG+AGG | + | chr1_2:50528237-50528256 | Msa0075370:CDS | 25.0% |
| !! | CATTTTTATAAACTATCTCC+GGG | - | chr1_2:50528374-50528393 | None:intergenic | 25.0% |
| ! | TAAACATTTGTGAAGCTATT+TGG | + | chr1_2:50528437-50528456 | Msa0075370:intron | 25.0% |
| ! | TTAACATTATGAAATGTCAC+AGG | + | chr1_2:50528765-50528784 | Msa0075370:intron | 25.0% |
| !! | TTGGAATATTGATAACATGA+GGG | - | chr1_2:50529065-50529084 | None:intergenic | 25.0% |
| !! | TTTGGAATATTGATAACATG+AGG | - | chr1_2:50529066-50529085 | None:intergenic | 25.0% |
| ! | TTGTATGAACATTCATCATT+TGG | - | chr1_2:50529486-50529505 | None:intergenic | 25.0% |
| !! | TCTTTTTACATAAATGAACC+AGG | + | chr1_2:50529552-50529571 | Msa0075370:CDS | 25.0% |
| !! | CTTTTTACATAAATGAACCA+GGG | + | chr1_2:50529553-50529572 | Msa0075370:CDS | 25.0% |
| ! | TATGATAGCAAAATGAACAT+TGG | - | chr1_2:50529657-50529676 | None:intergenic | 25.0% |
| ! | TACAATATCTTCAAATGAAG+TGG | - | chr1_2:50529694-50529713 | None:intergenic | 25.0% |
| !!! | AAGAAACTTGTTATGATTTG+TGG | - | chr1_2:50527432-50527451 | None:intergenic | 25.0% |
| ! | AGAAAAAATTTCATTGCCAA+AGG | + | chr1_2:50527849-50527868 | Msa0075370:CDS | 25.0% |
| !!! | ATATCTCTAAGATTTTCCTT+TGG | - | chr1_2:50527868-50527887 | None:intergenic | 25.0% |
| ! | CTTAGAGATATTACATTATG+GGG | + | chr1_2:50527877-50527896 | Msa0075370:CDS | 25.0% |
| ! | ATATTTGGATAGTAGAGATA+AGG | + | chr1_2:50528086-50528105 | Msa0075370:CDS | 25.0% |
| ! | AATTTGTACAAGAAGACATT+TGG | + | chr1_2:50528156-50528175 | Msa0075370:CDS | 25.0% |
| !!! | ATTAAGAAGTTGAGTTTTAG+AGG | + | chr1_2:50528237-50528256 | Msa0075370:CDS | 25.0% |
| !! | CATTTTTATAAACTATCTCC+GGG | - | chr1_2:50528374-50528393 | None:intergenic | 25.0% |
| ! | TAAACATTTGTGAAGCTATT+TGG | + | chr1_2:50528437-50528456 | Msa0075370:intron | 25.0% |
| ! | TTAACATTATGAAATGTCAC+AGG | + | chr1_2:50528765-50528784 | Msa0075370:intron | 25.0% |
| !! | TTGGAATATTGATAACATGA+GGG | - | chr1_2:50529065-50529084 | None:intergenic | 25.0% |
| !! | TTTGGAATATTGATAACATG+AGG | - | chr1_2:50529066-50529085 | None:intergenic | 25.0% |
| ! | TTGTATGAACATTCATCATT+TGG | - | chr1_2:50529486-50529505 | None:intergenic | 25.0% |
| !! | TCTTTTTACATAAATGAACC+AGG | + | chr1_2:50529552-50529571 | Msa0075370:CDS | 25.0% |
| !! | CTTTTTACATAAATGAACCA+GGG | + | chr1_2:50529553-50529572 | Msa0075370:CDS | 25.0% |
| ! | TATGATAGCAAAATGAACAT+TGG | - | chr1_2:50529657-50529676 | None:intergenic | 25.0% |
| ! | TACAATATCTTCAAATGAAG+TGG | - | chr1_2:50529694-50529713 | None:intergenic | 25.0% |
| ATGTTCATCATTGCATTCAT+CGG | - | chr1_2:50527569-50527588 | None:intergenic | 30.0% | |
| ATGAATGCAATGATGAACAT+GGG | + | chr1_2:50527569-50527588 | Msa0075370:CDS | 30.0% | |
| TCAAATAAGACTTCTCAATG+AGG | + | chr1_2:50527630-50527649 | Msa0075370:CDS | 30.0% | |
| CAAGAGAAAGAAATCATTGT+TGG | + | chr1_2:50527762-50527781 | Msa0075370:CDS | 30.0% | |
| ! | GGAAAATATTTGTTAGGTGA+AGG | + | chr1_2:50527817-50527836 | Msa0075370:CDS | 30.0% |
| TGTTCCTTTATTACCAAGTA+GGG | + | chr1_2:50527900-50527919 | Msa0075370:CDS | 30.0% | |
| !! | GGTTCTGATTTTGAAAAAGT+TGG | + | chr1_2:50528063-50528082 | Msa0075370:CDS | 30.0% |
| TCGTAAACATAGTAACAAAC+CGG | - | chr1_2:50528120-50528139 | None:intergenic | 30.0% | |
| !!! | AATGTGACTTGTTTTTGAGA+TGG | + | chr1_2:50528190-50528209 | Msa0075370:CDS | 30.0% |
| ! | AAGCTATTTGGAATAACTTG+TGG | + | chr1_2:50528449-50528468 | Msa0075370:intron | 30.0% |
| ACATATTTGTAAGCTGTTCT+CGG | + | chr1_2:50528484-50528503 | Msa0075370:intron | 30.0% | |
| ATTTACTACAATCTGCAAAC+AGG | - | chr1_2:50528567-50528586 | None:intergenic | 30.0% | |
| ! | TTGTAGTAAATGCACCATTT+TGG | + | chr1_2:50528576-50528595 | Msa0075370:CDS | 30.0% |
| !! | TGAACTTCTTTTTGTTTCTC+TGG | - | chr1_2:50528640-50528659 | None:intergenic | 30.0% |
| TATCATCAGGAGAAAAATCT+TGG | - | chr1_2:50528847-50528866 | None:intergenic | 30.0% | |
| !! | TGCTCTAAAACTTTATCATC+AGG | - | chr1_2:50528860-50528879 | None:intergenic | 30.0% |
| GATACAACCCTAAAATTTCA+AGG | - | chr1_2:50529034-50529053 | None:intergenic | 30.0% | |
| ! | TGGAATATTGATAACATGAG+GGG | - | chr1_2:50529064-50529083 | None:intergenic | 30.0% |
| CAATATTCCAAAATGACTCA+TGG | + | chr1_2:50529074-50529093 | Msa0075370:intron | 30.0% | |
| TGTAACAATCTAATCTCTCA+CGG | - | chr1_2:50529299-50529318 | None:intergenic | 30.0% | |
| ACTCTATTTATGAACCATGT+TGG | + | chr1_2:50529352-50529371 | Msa0075370:intron | 30.0% | |
| ATGTTCATCATTGCATTCAT+CGG | - | chr1_2:50527569-50527588 | None:intergenic | 30.0% | |
| ATGAATGCAATGATGAACAT+GGG | + | chr1_2:50527569-50527588 | Msa0075370:CDS | 30.0% | |
| TCAAATAAGACTTCTCAATG+AGG | + | chr1_2:50527630-50527649 | Msa0075370:CDS | 30.0% | |
| CAAGAGAAAGAAATCATTGT+TGG | + | chr1_2:50527762-50527781 | Msa0075370:CDS | 30.0% | |
| ! | GGAAAATATTTGTTAGGTGA+AGG | + | chr1_2:50527817-50527836 | Msa0075370:CDS | 30.0% |
| TGTTCCTTTATTACCAAGTA+GGG | + | chr1_2:50527900-50527919 | Msa0075370:CDS | 30.0% | |
| !! | GGTTCTGATTTTGAAAAAGT+TGG | + | chr1_2:50528063-50528082 | Msa0075370:CDS | 30.0% |
| TCGTAAACATAGTAACAAAC+CGG | - | chr1_2:50528120-50528139 | None:intergenic | 30.0% | |
| !!! | AATGTGACTTGTTTTTGAGA+TGG | + | chr1_2:50528190-50528209 | Msa0075370:CDS | 30.0% |
| ! | AAGCTATTTGGAATAACTTG+TGG | + | chr1_2:50528449-50528468 | Msa0075370:intron | 30.0% |
| ACATATTTGTAAGCTGTTCT+CGG | + | chr1_2:50528484-50528503 | Msa0075370:intron | 30.0% | |
| ATTTACTACAATCTGCAAAC+AGG | - | chr1_2:50528567-50528586 | None:intergenic | 30.0% | |
| ! | TTGTAGTAAATGCACCATTT+TGG | + | chr1_2:50528576-50528595 | Msa0075370:CDS | 30.0% |
| !! | TGAACTTCTTTTTGTTTCTC+TGG | - | chr1_2:50528640-50528659 | None:intergenic | 30.0% |
| TATCATCAGGAGAAAAATCT+TGG | - | chr1_2:50528847-50528866 | None:intergenic | 30.0% | |
| !! | TGCTCTAAAACTTTATCATC+AGG | - | chr1_2:50528860-50528879 | None:intergenic | 30.0% |
| GATACAACCCTAAAATTTCA+AGG | - | chr1_2:50529034-50529053 | None:intergenic | 30.0% | |
| ! | TGGAATATTGATAACATGAG+GGG | - | chr1_2:50529064-50529083 | None:intergenic | 30.0% |
| CAATATTCCAAAATGACTCA+TGG | + | chr1_2:50529074-50529093 | Msa0075370:intron | 30.0% | |
| TGTAACAATCTAATCTCTCA+CGG | - | chr1_2:50529299-50529318 | None:intergenic | 30.0% | |
| ACTCTATTTATGAACCATGT+TGG | + | chr1_2:50529352-50529371 | Msa0075370:intron | 30.0% | |
| GATGAATGCAATGATGAACA+TGG | + | chr1_2:50527568-50527587 | Msa0075370:CDS | 35.0% | |
| TCATGATCTTGTTAGTGATG+TGG | + | chr1_2:50527681-50527700 | Msa0075370:CDS | 35.0% | |
| !! | AGAATTGGTTGATGATGATG+AGG | + | chr1_2:50527708-50527727 | Msa0075370:CDS | 35.0% |
| TTGTTAGGTGAAGGAGAAAA+AGG | + | chr1_2:50527826-50527845 | Msa0075370:CDS | 35.0% | |
| GTGTTCCTTTATTACCAAGT+AGG | + | chr1_2:50527899-50527918 | Msa0075370:CDS | 35.0% | |
| TGACATGTTACAGAAGACAT+TGG | + | chr1_2:50527993-50528012 | Msa0075370:CDS | 35.0% | |
| ! | TGTTACAGAAGACATTGGTT+TGG | + | chr1_2:50527998-50528017 | Msa0075370:CDS | 35.0% |
| TTGGATAGTAGAGATAAGGA+AGG | + | chr1_2:50528090-50528109 | Msa0075370:CDS | 35.0% | |
| !! | GGTTTGTTACTATGTTTACG+AGG | + | chr1_2:50528119-50528138 | Msa0075370:CDS | 35.0% |
| !!! | AAGAAGTTGAGTTTTAGAGG+TGG | + | chr1_2:50528240-50528259 | Msa0075370:CDS | 35.0% |
| !! | TGGTGTTGATGGAATTATTC+AGG | + | chr1_2:50528260-50528279 | Msa0075370:CDS | 35.0% |
| ! | TTGAAAAGTGCACCAATTCA+AGG | + | chr1_2:50528291-50528310 | Msa0075370:CDS | 35.0% |
| AGCTCTTTCATTCCTTGAAT+TGG | - | chr1_2:50528306-50528325 | None:intergenic | 35.0% | |
| ! | CTTCACAAGTGTTATTCTCA+AGG | + | chr1_2:50528606-50528625 | Msa0075370:CDS | 35.0% |
| ATGAAATGTCACAGGTACAT+AGG | + | chr1_2:50528773-50528792 | Msa0075370:intron | 35.0% | |
| AGTTGAATTTCCAGTCAATG+AGG | + | chr1_2:50528907-50528926 | Msa0075370:CDS | 35.0% | |
| ! | AATCCGGTCCTTGAAATTTT+AGG | + | chr1_2:50529023-50529042 | Msa0075370:intron | 35.0% |
| ! | ATCCGGTCCTTGAAATTTTA+GGG | + | chr1_2:50529024-50529043 | Msa0075370:intron | 35.0% |
| AACCCTAAAATTTCAAGGAC+CGG | - | chr1_2:50529029-50529048 | None:intergenic | 35.0% | |
| ! | TGCAATTCCATGAGTCATTT+TGG | - | chr1_2:50529084-50529103 | None:intergenic | 35.0% |
| CGATAACAGATTCAGATAGA+GGG | - | chr1_2:50529126-50529145 | None:intergenic | 35.0% | |
| CCTCTATCTGAATCTGTTAT+CGG | + | chr1_2:50529124-50529143 | Msa0075370:intron | 35.0% | |
| CTAGTCCCTACATATATCAA+TGG | + | chr1_2:50529219-50529238 | Msa0075370:intron | 35.0% | |
| TCCCTACATATATCAATGGA+GGG | + | chr1_2:50529223-50529242 | Msa0075370:intron | 35.0% | |
| TCCCTCCATTGATATATGTA+GGG | - | chr1_2:50529227-50529246 | None:intergenic | 35.0% | |
| TTCCCTCCATTGATATATGT+AGG | - | chr1_2:50529228-50529247 | None:intergenic | 35.0% | |
| ! | TGCAATTTCAGAGACCATTT+TGG | + | chr1_2:50529263-50529282 | Msa0075370:intron | 35.0% |
| !! | ACGGTATCGATATTCCAAAA+TGG | - | chr1_2:50529280-50529299 | None:intergenic | 35.0% |
| TTTCTTTGATGTGTCTAGAC+TGG | + | chr1_2:50529396-50529415 | Msa0075370:intron | 35.0% | |
| !! | CTACAAAACCAAAGTGTTGT+TGG | + | chr1_2:50529513-50529532 | Msa0075370:CDS | 35.0% |
| ACTGTTATTACTATCTTCCC+TGG | - | chr1_2:50529573-50529592 | None:intergenic | 35.0% | |
| !! | AATTTCATGTTGGTAGCTTC+TGG | - | chr1_2:50529738-50529757 | None:intergenic | 35.0% |
| AGCTACCAACATGAAATTGA+TGG | + | chr1_2:50529740-50529759 | Msa0075370:CDS | 35.0% | |
| TTCTGCCATCAATTTCATGT+TGG | - | chr1_2:50529748-50529767 | None:intergenic | 35.0% | |
| GATGAATGCAATGATGAACA+TGG | + | chr1_2:50527568-50527587 | Msa0075370:CDS | 35.0% | |
| TCATGATCTTGTTAGTGATG+TGG | + | chr1_2:50527681-50527700 | Msa0075370:CDS | 35.0% | |
| !! | AGAATTGGTTGATGATGATG+AGG | + | chr1_2:50527708-50527727 | Msa0075370:CDS | 35.0% |
| TTGTTAGGTGAAGGAGAAAA+AGG | + | chr1_2:50527826-50527845 | Msa0075370:CDS | 35.0% | |
| GTGTTCCTTTATTACCAAGT+AGG | + | chr1_2:50527899-50527918 | Msa0075370:CDS | 35.0% | |
| TGACATGTTACAGAAGACAT+TGG | + | chr1_2:50527993-50528012 | Msa0075370:CDS | 35.0% | |
| ! | TGTTACAGAAGACATTGGTT+TGG | + | chr1_2:50527998-50528017 | Msa0075370:CDS | 35.0% |
| TTGGATAGTAGAGATAAGGA+AGG | + | chr1_2:50528090-50528109 | Msa0075370:CDS | 35.0% | |
| !! | GGTTTGTTACTATGTTTACG+AGG | + | chr1_2:50528119-50528138 | Msa0075370:CDS | 35.0% |
| !!! | AAGAAGTTGAGTTTTAGAGG+TGG | + | chr1_2:50528240-50528259 | Msa0075370:CDS | 35.0% |
| !! | TGGTGTTGATGGAATTATTC+AGG | + | chr1_2:50528260-50528279 | Msa0075370:CDS | 35.0% |
| ! | TTGAAAAGTGCACCAATTCA+AGG | + | chr1_2:50528291-50528310 | Msa0075370:CDS | 35.0% |
| AGCTCTTTCATTCCTTGAAT+TGG | - | chr1_2:50528306-50528325 | None:intergenic | 35.0% | |
| ! | CTTCACAAGTGTTATTCTCA+AGG | + | chr1_2:50528606-50528625 | Msa0075370:CDS | 35.0% |
| ATGAAATGTCACAGGTACAT+AGG | + | chr1_2:50528773-50528792 | Msa0075370:intron | 35.0% | |
| AGTTGAATTTCCAGTCAATG+AGG | + | chr1_2:50528907-50528926 | Msa0075370:CDS | 35.0% | |
| ! | AATCCGGTCCTTGAAATTTT+AGG | + | chr1_2:50529023-50529042 | Msa0075370:intron | 35.0% |
| ! | ATCCGGTCCTTGAAATTTTA+GGG | + | chr1_2:50529024-50529043 | Msa0075370:intron | 35.0% |
| AACCCTAAAATTTCAAGGAC+CGG | - | chr1_2:50529029-50529048 | None:intergenic | 35.0% | |
| ! | TGCAATTCCATGAGTCATTT+TGG | - | chr1_2:50529084-50529103 | None:intergenic | 35.0% |
| CGATAACAGATTCAGATAGA+GGG | - | chr1_2:50529126-50529145 | None:intergenic | 35.0% | |
| CCTCTATCTGAATCTGTTAT+CGG | + | chr1_2:50529124-50529143 | Msa0075370:intron | 35.0% | |
| CTAGTCCCTACATATATCAA+TGG | + | chr1_2:50529219-50529238 | Msa0075370:intron | 35.0% | |
| TCCCTACATATATCAATGGA+GGG | + | chr1_2:50529223-50529242 | Msa0075370:intron | 35.0% | |
| TCCCTCCATTGATATATGTA+GGG | - | chr1_2:50529227-50529246 | None:intergenic | 35.0% | |
| TTCCCTCCATTGATATATGT+AGG | - | chr1_2:50529228-50529247 | None:intergenic | 35.0% | |
| ! | TGCAATTTCAGAGACCATTT+TGG | + | chr1_2:50529263-50529282 | Msa0075370:intron | 35.0% |
| !! | ACGGTATCGATATTCCAAAA+TGG | - | chr1_2:50529280-50529299 | None:intergenic | 35.0% |
| TTTCTTTGATGTGTCTAGAC+TGG | + | chr1_2:50529396-50529415 | Msa0075370:intron | 35.0% | |
| !! | CTACAAAACCAAAGTGTTGT+TGG | + | chr1_2:50529513-50529532 | Msa0075370:CDS | 35.0% |
| ACTGTTATTACTATCTTCCC+TGG | - | chr1_2:50529573-50529592 | None:intergenic | 35.0% | |
| !! | AATTTCATGTTGGTAGCTTC+TGG | - | chr1_2:50529738-50529757 | None:intergenic | 35.0% |
| AGCTACCAACATGAAATTGA+TGG | + | chr1_2:50529740-50529759 | Msa0075370:CDS | 35.0% | |
| TTCTGCCATCAATTTCATGT+TGG | - | chr1_2:50529748-50529767 | None:intergenic | 35.0% | |
| ACGAGAATTTGCCAGAAAAC+TGG | - | chr1_2:50527507-50527526 | None:intergenic | 40.0% | |
| TAGTGATGTGGAACGAGAAT+TGG | + | chr1_2:50527693-50527712 | Msa0075370:CDS | 40.0% | |
| !! | TTGGTTGATGATGATGAGGT+AGG | + | chr1_2:50527712-50527731 | Msa0075370:CDS | 40.0% |
| !! | TGGTTGATGATGATGAGGTA+GGG | + | chr1_2:50527713-50527732 | Msa0075370:CDS | 40.0% |
| ! | TGTGCCCTACTTGGTAATAA+AGG | - | chr1_2:50527907-50527926 | None:intergenic | 40.0% |
| !!! | GTGACTTGTTTTTGAGATGG+AGG | + | chr1_2:50528193-50528212 | Msa0075370:CDS | 40.0% |
| GAGATGGAGGATTCAATTGA+TGG | + | chr1_2:50528206-50528225 | Msa0075370:CDS | 40.0% | |
| !!! | AGTTTTAGAGGTGGTGTTGA+TGG | + | chr1_2:50528249-50528268 | Msa0075370:CDS | 40.0% |
| ! | CATAAGAGCCTTTTTGCTGA+CGG | - | chr1_2:50528334-50528353 | None:intergenic | 40.0% |
| ! | GTTGTTTCAAAGCTACTACC+CGG | + | chr1_2:50528353-50528372 | Msa0075370:CDS | 40.0% |
| TGTGAAGTGTAGAGCCAAAA+TGG | - | chr1_2:50528593-50528612 | None:intergenic | 40.0% | |
| CCGATAACAGATTCAGATAG+AGG | - | chr1_2:50529127-50529146 | None:intergenic | 40.0% | |
| ! | AGTCTAGAGTGGCATTAAGT+TGG | - | chr1_2:50529199-50529218 | None:intergenic | 40.0% |
| GTCCCTACATATATCAATGG+AGG | + | chr1_2:50529222-50529241 | Msa0075370:intron | 40.0% | |
| GAACAAAGGAAAGTCCAACA+TGG | - | chr1_2:50529369-50529388 | None:intergenic | 40.0% | |
| AGACTGGAGTGACAATAATG+TGG | + | chr1_2:50529412-50529431 | Msa0075370:intron | 40.0% | |
| GACTGGAGTGACAATAATGT+GGG | + | chr1_2:50529413-50529432 | Msa0075370:intron | 40.0% | |
| ATGTGGGACATAACTGTTGT+TGG | + | chr1_2:50529429-50529448 | Msa0075370:CDS | 40.0% | |
| GGACATAACTGTTGTTGGAT+GGG | + | chr1_2:50529434-50529453 | Msa0075370:CDS | 40.0% | |
| ACGAGAATTTGCCAGAAAAC+TGG | - | chr1_2:50527507-50527526 | None:intergenic | 40.0% | |
| TAGTGATGTGGAACGAGAAT+TGG | + | chr1_2:50527693-50527712 | Msa0075370:CDS | 40.0% | |
| !! | TTGGTTGATGATGATGAGGT+AGG | + | chr1_2:50527712-50527731 | Msa0075370:CDS | 40.0% |
| !! | TGGTTGATGATGATGAGGTA+GGG | + | chr1_2:50527713-50527732 | Msa0075370:CDS | 40.0% |
| ! | TGTGCCCTACTTGGTAATAA+AGG | - | chr1_2:50527907-50527926 | None:intergenic | 40.0% |
| !!! | GTGACTTGTTTTTGAGATGG+AGG | + | chr1_2:50528193-50528212 | Msa0075370:CDS | 40.0% |
| GAGATGGAGGATTCAATTGA+TGG | + | chr1_2:50528206-50528225 | Msa0075370:CDS | 40.0% | |
| !!! | AGTTTTAGAGGTGGTGTTGA+TGG | + | chr1_2:50528249-50528268 | Msa0075370:CDS | 40.0% |
| ! | CATAAGAGCCTTTTTGCTGA+CGG | - | chr1_2:50528334-50528353 | None:intergenic | 40.0% |
| ! | GTTGTTTCAAAGCTACTACC+CGG | + | chr1_2:50528353-50528372 | Msa0075370:CDS | 40.0% |
| TGTGAAGTGTAGAGCCAAAA+TGG | - | chr1_2:50528593-50528612 | None:intergenic | 40.0% | |
| CCGATAACAGATTCAGATAG+AGG | - | chr1_2:50529127-50529146 | None:intergenic | 40.0% | |
| ! | AGTCTAGAGTGGCATTAAGT+TGG | - | chr1_2:50529199-50529218 | None:intergenic | 40.0% |
| GTCCCTACATATATCAATGG+AGG | + | chr1_2:50529222-50529241 | Msa0075370:intron | 40.0% | |
| GAACAAAGGAAAGTCCAACA+TGG | - | chr1_2:50529369-50529388 | None:intergenic | 40.0% | |
| AGACTGGAGTGACAATAATG+TGG | + | chr1_2:50529412-50529431 | Msa0075370:intron | 40.0% | |
| GACTGGAGTGACAATAATGT+GGG | + | chr1_2:50529413-50529432 | Msa0075370:intron | 40.0% | |
| ATGTGGGACATAACTGTTGT+TGG | + | chr1_2:50529429-50529448 | Msa0075370:CDS | 40.0% | |
| GGACATAACTGTTGTTGGAT+GGG | + | chr1_2:50529434-50529453 | Msa0075370:CDS | 40.0% | |
| GAAAACTGGAGCATGGAAGA+GGG | - | chr1_2:50527493-50527512 | None:intergenic | 45.0% | |
| AGAAAACTGGAGCATGGAAG+AGG | - | chr1_2:50527494-50527513 | None:intergenic | 45.0% | |
| ! | TCTTCCATGCTCCAGTTTTC+TGG | + | chr1_2:50527493-50527512 | Msa0075370:exon | 45.0% |
| TTTGCCAGAAAACTGGAGCA+TGG | - | chr1_2:50527500-50527519 | None:intergenic | 45.0% | |
| TTCTGGCAAATTCTCGTTGC+CGG | + | chr1_2:50527510-50527529 | Msa0075370:CDS | 45.0% | |
| ! | TCTTCCCTGATCGGATTTTC+CGG | - | chr1_2:50527532-50527551 | None:intergenic | 45.0% |
| GCATTCATCGGTATCACTCA+TGG | - | chr1_2:50527557-50527576 | None:intergenic | 45.0% | |
| TTACCAAGTAGGGCACATGA+AGG | + | chr1_2:50527910-50527929 | Msa0075370:CDS | 45.0% | |
| TAGAGATAAGGAAGGTCGAC+CGG | + | chr1_2:50528098-50528117 | Msa0075370:CDS | 45.0% | |
| TCATCCTTGCAAGACCACAA+AGG | + | chr1_2:50528657-50528676 | Msa0075370:CDS | 45.0% | |
| CATCCTTGCAAGACCACAAA+GGG | + | chr1_2:50528658-50528677 | Msa0075370:CDS | 45.0% | |
| AGAATTGGTGTGACCCTTTG+TGG | - | chr1_2:50528674-50528693 | None:intergenic | 45.0% | |
| GACACTCACCTGAGAAGAAT+TGG | - | chr1_2:50528689-50528708 | None:intergenic | 45.0% | |
| TTGTTGAGCACCTCATTGAC+TGG | - | chr1_2:50528920-50528939 | None:intergenic | 45.0% | |
| GGGACATAACTGTTGTTGGA+TGG | + | chr1_2:50529433-50529452 | Msa0075370:CDS | 45.0% | |
| CATAACTGTTGTTGGATGGG+AGG | + | chr1_2:50529437-50529456 | Msa0075370:CDS | 45.0% | |
| TGGATGGGAGGTGATTTACA+AGG | + | chr1_2:50529449-50529468 | Msa0075370:CDS | 45.0% | |
| TGCTGTCACCAACAACACTT+TGG | - | chr1_2:50529524-50529543 | None:intergenic | 45.0% | |
| GAAAACTGGAGCATGGAAGA+GGG | - | chr1_2:50527493-50527512 | None:intergenic | 45.0% | |
| AGAAAACTGGAGCATGGAAG+AGG | - | chr1_2:50527494-50527513 | None:intergenic | 45.0% | |
| ! | TCTTCCATGCTCCAGTTTTC+TGG | + | chr1_2:50527493-50527512 | Msa0075370:exon | 45.0% |
| TTTGCCAGAAAACTGGAGCA+TGG | - | chr1_2:50527500-50527519 | None:intergenic | 45.0% | |
| TTCTGGCAAATTCTCGTTGC+CGG | + | chr1_2:50527510-50527529 | Msa0075370:CDS | 45.0% | |
| ! | TCTTCCCTGATCGGATTTTC+CGG | - | chr1_2:50527532-50527551 | None:intergenic | 45.0% |
| GCATTCATCGGTATCACTCA+TGG | - | chr1_2:50527557-50527576 | None:intergenic | 45.0% | |
| TTACCAAGTAGGGCACATGA+AGG | + | chr1_2:50527910-50527929 | Msa0075370:CDS | 45.0% | |
| TAGAGATAAGGAAGGTCGAC+CGG | + | chr1_2:50528098-50528117 | Msa0075370:CDS | 45.0% | |
| TCATCCTTGCAAGACCACAA+AGG | + | chr1_2:50528657-50528676 | Msa0075370:CDS | 45.0% | |
| CATCCTTGCAAGACCACAAA+GGG | + | chr1_2:50528658-50528677 | Msa0075370:CDS | 45.0% | |
| AGAATTGGTGTGACCCTTTG+TGG | - | chr1_2:50528674-50528693 | None:intergenic | 45.0% | |
| GACACTCACCTGAGAAGAAT+TGG | - | chr1_2:50528689-50528708 | None:intergenic | 45.0% | |
| TTGTTGAGCACCTCATTGAC+TGG | - | chr1_2:50528920-50528939 | None:intergenic | 45.0% | |
| GGGACATAACTGTTGTTGGA+TGG | + | chr1_2:50529433-50529452 | Msa0075370:CDS | 45.0% | |
| CATAACTGTTGTTGGATGGG+AGG | + | chr1_2:50529437-50529456 | Msa0075370:CDS | 45.0% | |
| TGGATGGGAGGTGATTTACA+AGG | + | chr1_2:50529449-50529468 | Msa0075370:CDS | 45.0% | |
| TGCTGTCACCAACAACACTT+TGG | - | chr1_2:50529524-50529543 | None:intergenic | 45.0% | |
| GTTGCCGGAAAATCCGATCA+GGG | + | chr1_2:50527525-50527544 | Msa0075370:CDS | 50.0% | |
| GGAAAATCCGATCAGGGAAG+AGG | + | chr1_2:50527531-50527550 | Msa0075370:CDS | 50.0% | |
| CACCAAGTCCTGCAGAGATT+AGG | + | chr1_2:50527737-50527756 | Msa0075370:CDS | 50.0% | |
| AGCCTAATCTCTGCAGGACT+TGG | - | chr1_2:50527742-50527761 | None:intergenic | 50.0% | |
| CTCTTGAGCCTAATCTCTGC+AGG | - | chr1_2:50527748-50527767 | None:intergenic | 50.0% | |
| GTACCTTCATGTGCCCTACT+TGG | - | chr1_2:50527916-50527935 | None:intergenic | 50.0% | |
| GCTCAACTCCGTCAGCAAAA+AGG | + | chr1_2:50528323-50528342 | Msa0075370:CDS | 50.0% | |
| ! | TGACCCTTTGTGGTCTTGCA+AGG | - | chr1_2:50528664-50528683 | None:intergenic | 50.0% |
| GGGTCACACCAATTCTTCTC+AGG | + | chr1_2:50528678-50528697 | Msa0075370:CDS | 50.0% | |
| ATCCAGCTGGAAGATGCTCT+GGG | - | chr1_2:50528799-50528818 | None:intergenic | 50.0% | |
| TATCCAGCTGGAAGATGCTC+TGG | - | chr1_2:50528800-50528819 | None:intergenic | 50.0% | |
| GAGCATCTTCCAGCTGGATA+TGG | + | chr1_2:50528800-50528819 | Msa0075370:CDS | 50.0% | |
| CATCTTCCAGCTGGATATGG+TGG | + | chr1_2:50528803-50528822 | Msa0075370:CDS | 50.0% | |
| CTTAGACCACCATATCCAGC+TGG | - | chr1_2:50528812-50528831 | None:intergenic | 50.0% | |
| CAGCTGGATATGGTGGTCTA+AGG | + | chr1_2:50528810-50528829 | Msa0075370:CDS | 50.0% | |
| CTGGATATGGTGGTCTAAGG+AGG | + | chr1_2:50528813-50528832 | Msa0075370:CDS | 50.0% | |
| GTAGGGACTAGAGTCTAGAG+TGG | - | chr1_2:50529210-50529229 | None:intergenic | 50.0% | |
| GTTGCCGGAAAATCCGATCA+GGG | + | chr1_2:50527525-50527544 | Msa0075370:CDS | 50.0% | |
| GGAAAATCCGATCAGGGAAG+AGG | + | chr1_2:50527531-50527550 | Msa0075370:CDS | 50.0% | |
| CACCAAGTCCTGCAGAGATT+AGG | + | chr1_2:50527737-50527756 | Msa0075370:CDS | 50.0% | |
| AGCCTAATCTCTGCAGGACT+TGG | - | chr1_2:50527742-50527761 | None:intergenic | 50.0% | |
| CTCTTGAGCCTAATCTCTGC+AGG | - | chr1_2:50527748-50527767 | None:intergenic | 50.0% | |
| GTACCTTCATGTGCCCTACT+TGG | - | chr1_2:50527916-50527935 | None:intergenic | 50.0% | |
| GCTCAACTCCGTCAGCAAAA+AGG | + | chr1_2:50528323-50528342 | Msa0075370:CDS | 50.0% | |
| ! | TGACCCTTTGTGGTCTTGCA+AGG | - | chr1_2:50528664-50528683 | None:intergenic | 50.0% |
| GGGTCACACCAATTCTTCTC+AGG | + | chr1_2:50528678-50528697 | Msa0075370:CDS | 50.0% | |
| ATCCAGCTGGAAGATGCTCT+GGG | - | chr1_2:50528799-50528818 | None:intergenic | 50.0% | |
| TATCCAGCTGGAAGATGCTC+TGG | - | chr1_2:50528800-50528819 | None:intergenic | 50.0% | |
| GAGCATCTTCCAGCTGGATA+TGG | + | chr1_2:50528800-50528819 | Msa0075370:CDS | 50.0% | |
| CATCTTCCAGCTGGATATGG+TGG | + | chr1_2:50528803-50528822 | Msa0075370:CDS | 50.0% | |
| CTTAGACCACCATATCCAGC+TGG | - | chr1_2:50528812-50528831 | None:intergenic | 50.0% | |
| CAGCTGGATATGGTGGTCTA+AGG | + | chr1_2:50528810-50528829 | Msa0075370:CDS | 50.0% | |
| CTGGATATGGTGGTCTAAGG+AGG | + | chr1_2:50528813-50528832 | Msa0075370:CDS | 50.0% | |
| GTAGGGACTAGAGTCTAGAG+TGG | - | chr1_2:50529210-50529229 | None:intergenic | 50.0% | |
| TGGGGAGGGATCAGGAAAGA+TGG | - | chr1_2:50527461-50527480 | None:intergenic | 55.0% | |
| ! | TGGAAGAGGGTGCAGAGGAT+GGG | - | chr1_2:50527480-50527499 | None:intergenic | 55.0% |
| ! | ATGGAAGAGGGTGCAGAGGA+TGG | - | chr1_2:50527481-50527500 | None:intergenic | 55.0% |
| CGTTGCCGGAAAATCCGATC+AGG | + | chr1_2:50527524-50527543 | Msa0075370:CDS | 55.0% | |
| CTCATGGCCTCTTCCCTGAT+CGG | - | chr1_2:50527541-50527560 | None:intergenic | 55.0% | |
| TGGGGAGGGATCAGGAAAGA+TGG | - | chr1_2:50527461-50527480 | None:intergenic | 55.0% | |
| ! | TGGAAGAGGGTGCAGAGGAT+GGG | - | chr1_2:50527480-50527499 | None:intergenic | 55.0% |
| ! | ATGGAAGAGGGTGCAGAGGA+TGG | - | chr1_2:50527481-50527500 | None:intergenic | 55.0% |
| CGTTGCCGGAAAATCCGATC+AGG | + | chr1_2:50527524-50527543 | Msa0075370:CDS | 55.0% | |
| CTCATGGCCTCTTCCCTGAT+CGG | - | chr1_2:50527541-50527560 | None:intergenic | 55.0% | |
| ! | GGAAGAGGGTGCAGAGGATG+GGG | - | chr1_2:50527479-50527498 | None:intergenic | 60.0% |
| ! | GAGCATGGAAGAGGGTGCAG+AGG | - | chr1_2:50527485-50527504 | None:intergenic | 60.0% |
| ! | GGAAGAGGGTGCAGAGGATG+GGG | - | chr1_2:50527479-50527498 | None:intergenic | 60.0% |
| ! | GAGCATGGAAGAGGGTGCAG+AGG | - | chr1_2:50527485-50527504 | None:intergenic | 60.0% |
| GCAGAGGATGGGGAGGGATC+AGG | - | chr1_2:50527469-50527488 | None:intergenic | 65.0% | |
| ! | GAGGGTGCAGAGGATGGGGA+GGG | - | chr1_2:50527475-50527494 | None:intergenic | 65.0% |
| ! | AGAGGGTGCAGAGGATGGGG+AGG | - | chr1_2:50527476-50527495 | None:intergenic | 65.0% |
| ! | GGCCCAGAGCATCTTCCAGC+TGG | + | chr1_2:50528794-50528813 | Msa0075370:CDS | 65.0% |
| GCAGAGGATGGGGAGGGATC+AGG | - | chr1_2:50527469-50527488 | None:intergenic | 65.0% | |
| ! | GAGGGTGCAGAGGATGGGGA+GGG | - | chr1_2:50527475-50527494 | None:intergenic | 65.0% |
| ! | AGAGGGTGCAGAGGATGGGG+AGG | - | chr1_2:50527476-50527495 | None:intergenic | 65.0% |
| ! | GGCCCAGAGCATCTTCCAGC+TGG | + | chr1_2:50528794-50528813 | Msa0075370:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 50527381 | 50529770 | 50527381 | ID=Msa0075370;Name=Msa0075370 |
| chr1_2 | mRNA | 50527381 | 50529770 | 50527381 | ID=Msa0075370-mRNA-1;Parent=Msa0075370;Name=Msa0075370-mRNA-1;_AED=0.10;_eAED=0.10;_QI=118|0.75|0.6|1|1|1|5|0|469 |
| chr1_2 | exon | 50527381 | 50528392 | 50527381 | ID=Msa0075370-mRNA-1:exon:15588;Parent=Msa0075370-mRNA-1 |
| chr1_2 | exon | 50528575 | 50528699 | 50528575 | ID=Msa0075370-mRNA-1:exon:15589;Parent=Msa0075370-mRNA-1 |
| chr1_2 | exon | 50528787 | 50528928 | 50528787 | ID=Msa0075370-mRNA-1:exon:15590;Parent=Msa0075370-mRNA-1 |
| chr1_2 | exon | 50529414 | 50529622 | 50529414 | ID=Msa0075370-mRNA-1:exon:15591;Parent=Msa0075370-mRNA-1 |
| chr1_2 | exon | 50529731 | 50529770 | 50529731 | ID=Msa0075370-mRNA-1:exon:15592;Parent=Msa0075370-mRNA-1 |
| chr1_2 | five_prime_UTR | 50527381 | 50527498 | 50527381 | ID=Msa0075370-mRNA-1:five_prime_utr;Parent=Msa0075370-mRNA-1 |
| chr1_2 | CDS | 50527499 | 50528392 | 50527499 | ID=Msa0075370-mRNA-1:cds;Parent=Msa0075370-mRNA-1 |
| chr1_2 | CDS | 50528575 | 50528699 | 50528575 | ID=Msa0075370-mRNA-1:cds;Parent=Msa0075370-mRNA-1 |
| chr1_2 | CDS | 50528787 | 50528928 | 50528787 | ID=Msa0075370-mRNA-1:cds;Parent=Msa0075370-mRNA-1 |
| chr1_2 | CDS | 50529414 | 50529622 | 50529414 | ID=Msa0075370-mRNA-1:cds;Parent=Msa0075370-mRNA-1 |
| chr1_2 | CDS | 50529731 | 50529770 | 50529731 | ID=Msa0075370-mRNA-1:cds;Parent=Msa0075370-mRNA-1 |
| Gene Sequence |
| Protein sequence |
