Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0123310 | XP_013468489.1 | 96.718 | 457 | 15 | 0 | 1 | 457 | 1 | 457 | 0.0 | 907 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0123310 | sp|Q94C59|PATL4_ARATH | 45.808 | 334 | 171 | 5 | 128 | 457 | 201 | 528 | 1.67e-99 | 311 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0123310 | A0A072VLM7 | 96.718 | 457 | 15 | 0 | 1 | 457 | 1 | 457 | 0.0 | 907 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000610 | Msa0123310 | 0.821663 | 3.581300e-53 | -8.615850e-47 |
| Msa0011060 | Msa0123310 | 0.807441 | 5.046240e-50 | -8.615850e-47 |
| Msa0011100 | Msa0123310 | 0.802567 | 5.277240e-49 | -8.615850e-47 |
| Msa0025060 | Msa0123310 | 0.853264 | 2.680718e-61 | -8.615850e-47 |
| Msa0025090 | Msa0123310 | 0.851303 | 9.689857e-61 | -8.615850e-47 |
| Msa0027610 | Msa0123310 | 0.969996 | 5.968080e-131 | -8.615850e-47 |
| Msa0030760 | Msa0123310 | 0.801574 | 8.443796e-49 | -8.615850e-47 |
| Msa0042500 | Msa0123310 | 0.803426 | 3.505218e-49 | -8.615850e-47 |
| Msa0044010 | Msa0123310 | -0.823821 | 1.126904e-53 | -8.615850e-47 |
| Msa0049670 | Msa0123310 | 0.841536 | 4.478709e-58 | -8.615850e-47 |
| Msa0072590 | Msa0123310 | 0.845448 | 4.037122e-59 | -8.615850e-47 |
| Msa0075370 | Msa0123310 | 0.934576 | 3.261051e-96 | -8.615850e-47 |
| Msa0079320 | Msa0123310 | 0.844207 | 8.722169e-59 | -8.615850e-47 |
| Msa0081700 | Msa0123310 | 0.858998 | 5.604266e-63 | -8.615850e-47 |
| Msa0083200 | Msa0123310 | 0.831210 | 1.899590e-55 | -8.615850e-47 |
| Msa0091300 | Msa0123310 | 0.834245 | 3.350897e-56 | -8.615850e-47 |
| Msa0094900 | Msa0123310 | 0.801183 | 1.015196e-48 | -8.615850e-47 |
| Msa0095550 | Msa0123310 | 0.888773 | 4.385857e-73 | -8.615850e-47 |
| Msa0098750 | Msa0123310 | 0.801531 | 8.615542e-49 | -8.615850e-47 |
| Msa0099090 | Msa0123310 | 0.837249 | 5.811918e-57 | -8.615850e-47 |
| Msa0099350 | Msa0123310 | 0.803276 | 3.765336e-49 | -8.615850e-47 |
| Msa0099430 | Msa0123310 | 0.803500 | 3.383936e-49 | -8.615850e-47 |
| Msa0123310 | Msa0127240 | 0.801028 | 1.092171e-48 | -8.615850e-47 |
| Msa0123310 | Msa0127910 | 0.819485 | 1.132939e-52 | -8.615850e-47 |
| Msa0123310 | Msa0136300 | 0.809480 | 1.853472e-50 | -8.615850e-47 |
| Msa0123310 | Msa0136360 | 0.835302 | 1.816293e-56 | -8.615850e-47 |
| Msa0123310 | Msa0138380 | 0.802598 | 5.199531e-49 | -8.615850e-47 |
| Msa0123310 | Msa0139930 | 0.814309 | 1.644882e-51 | -8.615850e-47 |
| Msa0123310 | Msa0148000 | 0.816135 | 6.462490e-52 | -8.615850e-47 |
| Msa0123310 | Msa0153290 | 0.813115 | 3.013161e-51 | -8.615850e-47 |
| Msa0123310 | Msa0167800 | 0.941556 | 3.386478e-101 | -8.615850e-47 |
| Msa0123310 | Msa0172110 | 0.851221 | 1.021896e-60 | -8.615850e-47 |
| Msa0123310 | Msa0172290 | 0.801898 | 7.245145e-49 | -8.615850e-47 |
| Msa0123310 | Msa0174060 | 0.839813 | 1.265586e-57 | -8.615850e-47 |
| Msa0123310 | Msa0179010 | 0.809641 | 1.711779e-50 | -8.615850e-47 |
| Msa0123310 | Msa0183840 | -0.803160 | 3.980621e-49 | -8.615850e-47 |
| Msa0123310 | Msa0195030 | -0.833597 | 4.866508e-56 | -8.615850e-47 |
| Msa0123310 | Msa0198140 | 0.826212 | 3.070940e-54 | -8.615850e-47 |
| Msa0123310 | Msa0198220 | 0.823714 | 1.193850e-53 | -8.615850e-47 |
| Msa0123310 | Msa0219720 | 0.800857 | 1.183767e-48 | -8.615850e-47 |
| Msa0123310 | Msa0223500 | 0.820032 | 8.497564e-53 | -8.615850e-47 |
| Msa0123310 | Msa0227970 | 0.800221 | 1.595887e-48 | -8.615850e-47 |
| Msa0123310 | Msa0228360 | 0.846221 | 2.488711e-59 | -8.615850e-47 |
| Msa0123310 | Msa0232660 | 0.804094 | 2.547131e-49 | -8.615850e-47 |
| Msa0123310 | Msa0237180 | -0.832960 | 7.013136e-56 | -8.615850e-47 |
| Msa0123310 | Msa0240460 | 0.802648 | 5.077843e-49 | -8.615850e-47 |
| Msa0123310 | Msa0258280 | 0.847431 | 1.161360e-59 | -8.615850e-47 |
| Msa0123310 | Msa0264580 | 0.835195 | 1.932373e-56 | -8.615850e-47 |
| Msa0123310 | Msa0278340 | 0.825327 | 4.979855e-54 | -8.615850e-47 |
| Msa0123310 | Msa0281330 | -0.831750 | 1.398284e-55 | -8.615850e-47 |
| Msa0123310 | Msa0281370 | -0.845771 | 3.299166e-59 | -8.615850e-47 |
| Msa0123310 | Msa0295030 | 0.821768 | 3.387123e-53 | -8.615850e-47 |
| Msa0123310 | Msa0297320 | 0.818408 | 1.991564e-52 | -8.615850e-47 |
| Msa0123310 | Msa0304350 | 0.826051 | 3.353612e-54 | -8.615850e-47 |
| Msa0123310 | Msa0305910 | 0.823286 | 1.502867e-53 | -8.615850e-47 |
| Msa0123310 | Msa0307430 | -0.827533 | 1.484269e-54 | -8.615850e-47 |
| Msa0123310 | Msa0315660 | -0.833626 | 4.786012e-56 | -8.615850e-47 |
| Msa0123310 | Msa0328790 | 0.801062 | 1.074805e-48 | -8.615850e-47 |
| Msa0123310 | Msa0336550 | 0.802818 | 4.684499e-49 | -8.615850e-47 |
| Msa0123310 | Msa0339970 | 0.835402 | 1.714015e-56 | -8.615850e-47 |
| Msa0123310 | Msa0340830 | 0.819332 | 1.227894e-52 | -8.615850e-47 |
| Msa0123310 | Msa0340870 | 0.805291 | 1.432809e-49 | -8.615850e-47 |
| Msa0123310 | Msa0362440 | 0.854846 | 9.376388e-62 | -8.615850e-47 |
| Msa0123310 | Msa0370350 | 0.858695 | 6.902721e-63 | -8.615850e-47 |
| Msa0123310 | Msa0378620 | 0.818026 | 2.429586e-52 | -8.615850e-47 |
| Msa0123310 | Msa0378920 | 0.803323 | 3.682334e-49 | -8.615850e-47 |
| Msa0123310 | Msa0384130 | 0.826920 | 2.081209e-54 | -8.615850e-47 |
| Msa0123310 | Msa0384330 | 0.806459 | 8.140412e-50 | -8.615850e-47 |
| Msa0123310 | Msa0390590 | 0.824225 | 9.058053e-54 | -8.615850e-47 |
| Msa0123310 | Msa0412480 | 0.812093 | 5.041920e-51 | -8.615850e-47 |
| Msa0123310 | Msa0417850 | 0.857379 | 1.699511e-62 | -8.615850e-47 |
| Msa0123310 | Msa0427890 | 0.819787 | 9.666014e-53 | -8.615850e-47 |
| Msa0123310 | Msa0432260 | 0.832807 | 7.655849e-56 | -8.615850e-47 |
| Msa0123310 | Msa0434840 | 0.827681 | 1.367518e-54 | -8.615850e-47 |
| Msa0123310 | Msa0474120 | 0.816843 | 4.487132e-52 | -8.615850e-47 |
| Msa0123310 | Msa0476730 | 0.811365 | 7.259850e-51 | -8.615850e-47 |
| Msa0123310 | Msa0478660 | 0.804555 | 2.041711e-49 | -8.615850e-47 |
| Msa0123310 | Msa0478750 | 0.825629 | 4.224211e-54 | -8.615850e-47 |
| Msa0123310 | Msa0483090 | 0.823357 | 1.447098e-53 | -8.615850e-47 |
| Msa0123310 | Msa0483160 | 0.833339 | 5.646421e-56 | -8.615850e-47 |
| Msa0123310 | Msa0502900 | 0.817834 | 2.685082e-52 | -8.615850e-47 |
| Msa0123310 | Msa0522730 | 0.808852 | 2.526155e-50 | -8.615850e-47 |
| Msa0123310 | Msa0522830 | 0.829240 | 5.749030e-55 | -8.615850e-47 |
| Msa0123310 | Msa0523400 | 0.801538 | 8.587379e-49 | -8.615850e-47 |
| Msa0123310 | Msa0526490 | 0.841903 | 3.582179e-58 | -8.615850e-47 |
| Msa0123310 | Msa0526500 | 0.821272 | 4.410295e-53 | -8.615850e-47 |
| Msa0123310 | Msa0526840 | 0.805617 | 1.224407e-49 | -8.615850e-47 |
| Msa0123310 | Msa0538050 | 0.809087 | 2.250246e-50 | -8.615850e-47 |
| Msa0123310 | Msa0540120 | 0.815169 | 1.060778e-51 | -8.615850e-47 |
| Msa0123310 | Msa0540160 | 0.809154 | 2.177259e-50 | -8.615850e-47 |
| Msa0123310 | Msa0545750 | 0.819660 | 1.033488e-52 | -8.615850e-47 |
| Msa0123310 | Msa0549550 | 0.825997 | 3.455121e-54 | -8.615850e-47 |
| Msa0123310 | Msa0559270 | 0.815047 | 1.129462e-51 | -8.615850e-47 |
| Msa0123310 | Msa0559440 | 0.852524 | 4.362588e-61 | -8.615850e-47 |
| Msa0123310 | Msa0559640 | 0.833090 | 6.512626e-56 | -8.615850e-47 |
| Msa0123310 | Msa0563230 | 0.805991 | 1.021587e-49 | -8.615850e-47 |
| Msa0123310 | Msa0564000 | 0.800516 | 1.389533e-48 | -8.615850e-47 |
| Msa0123310 | Msa0577290 | 0.813177 | 2.920419e-51 | -8.615850e-47 |
| Msa0123310 | Msa0577960 | 0.841385 | 4.905492e-58 | -8.615850e-47 |
| Msa0123310 | Msa0601470 | 0.811538 | 6.660417e-51 | -8.615850e-47 |
| Msa0123310 | Msa0604890 | 0.833408 | 5.426382e-56 | -8.615850e-47 |
| Msa0123310 | Msa0617470 | 0.833187 | 6.157787e-56 | -8.615850e-47 |
| Msa0123310 | Msa0619300 | -0.821742 | 3.434093e-53 | -8.615850e-47 |
| Msa0123310 | Msa0622800 | 0.802204 | 6.268469e-49 | -8.615850e-47 |
| Msa0123310 | Msa0622930 | 0.811221 | 7.802634e-51 | -8.615850e-47 |
| Msa0123310 | Msa0625550 | 0.841744 | 3.947067e-58 | -8.615850e-47 |
| Msa0123310 | Msa0635070 | 0.825035 | 5.837734e-54 | -8.615850e-47 |
| Msa0123310 | Msa0646180 | 0.845938 | 2.971094e-59 | -8.615850e-47 |
| Msa0123310 | Msa0654400 | 0.831173 | 1.939027e-55 | -8.615850e-47 |
| Msa0123310 | Msa0654500 | 0.824075 | 9.823839e-54 | -8.615850e-47 |
| Msa0123310 | Msa0654570 | 0.841255 | 5.309211e-58 | -8.615850e-47 |
| Msa0123310 | Msa0700250 | 0.830850 | 2.328390e-55 | -8.615850e-47 |
| Msa0123310 | Msa0704690 | -0.825294 | 5.070395e-54 | -8.615850e-47 |
| Msa0123310 | Msa0708840 | 0.827322 | 1.667715e-54 | -8.615850e-47 |
| Msa0123310 | Msa0722660 | 0.843380 | 1.452198e-58 | -8.615850e-47 |
| Msa0123310 | Msa0741600 | 0.803908 | 2.784452e-49 | -8.615850e-47 |
| Msa0123310 | Msa0742690 | 0.847141 | 1.395553e-59 | -8.615850e-47 |
| Msa0123310 | Msa0779830 | 0.864717 | 9.944442e-65 | -8.615850e-47 |
| Msa0123310 | Msa0783680 | -0.830331 | 3.119589e-55 | -8.615850e-47 |
| Msa0123310 | Msa0815650 | -0.803297 | 3.728162e-49 | -8.615850e-47 |
| Msa0123310 | Msa0827560 | 0.844899 | 5.678925e-59 | -8.615850e-47 |
| Msa0123310 | Msa0829770 | 0.804944 | 1.693804e-49 | -8.615850e-47 |
| Msa0123310 | Msa0831460 | 0.816674 | 4.896081e-52 | -8.615850e-47 |
| Msa0123310 | Msa0834220 | -0.802675 | 5.013612e-49 | -8.615850e-47 |
| Msa0123310 | Msa0862750 | 0.844959 | 5.471411e-59 | -8.615850e-47 |
| Msa0123310 | Msa0869320 | 0.827914 | 1.202256e-54 | -8.615850e-47 |
| Msa0123310 | Msa0870220 | 0.834961 | 2.213923e-56 | -8.615850e-47 |
| Msa0123310 | Msa0903460 | 0.834265 | 3.312344e-56 | -8.615850e-47 |
| Msa0123310 | Msa0906100 | 0.834732 | 2.528413e-56 | -8.615850e-47 |
| Msa0123310 | Msa0934290 | 0.825779 | 3.891788e-54 | -8.615850e-47 |
| Msa0123310 | Msa0935930 | 0.832940 | 7.096571e-56 | -8.615850e-47 |
| Msa0123310 | Msa0956600 | 0.808117 | 3.625510e-50 | -8.615850e-47 |
| Msa0123310 | Msa0971780 | 0.820962 | 5.197664e-53 | -8.615850e-47 |
| Msa0123310 | Msa0972930 | 0.829731 | 4.368031e-55 | -8.615850e-47 |
| Msa0123310 | Msa1011140 | 0.810838 | 9.444966e-51 | -8.615850e-47 |
| Msa0123310 | Msa1014550 | 0.804701 | 1.903849e-49 | -8.615850e-47 |
| Msa0123310 | Msa1018210 | 0.808561 | 2.915170e-50 | -8.615850e-47 |
| Msa0123310 | Msa1029570 | 0.806143 | 9.490645e-50 | -8.615850e-47 |
| Msa0123310 | Msa1039150 | 0.827984 | 1.156523e-54 | -8.615850e-47 |
| Msa0123310 | Msa1042420 | 0.820685 | 6.020349e-53 | -8.615850e-47 |
| Msa0123310 | Msa1050280 | 0.826732 | 2.308691e-54 | -8.615850e-47 |
| Msa0123310 | Msa1057940 | 0.812221 | 4.727099e-51 | -8.615850e-47 |
| Msa0123310 | Msa1078210 | 0.830077 | 3.598728e-55 | -8.615850e-47 |
| Msa0123310 | Msa1078280 | 0.835986 | 1.219250e-56 | -8.615850e-47 |
| Msa0123310 | Msa1083660 | 0.817277 | 3.583761e-52 | -8.615850e-47 |
| Msa0123310 | Msa1090020 | 0.822342 | 2.493552e-53 | -8.615850e-47 |
| Msa0123310 | Msa1098570 | 0.821911 | 3.138365e-53 | -8.615850e-47 |
| Msa0123310 | Msa1104020 | 0.805228 | 1.477531e-49 | -8.615850e-47 |
| Msa0123310 | Msa1113780 | 0.803166 | 3.968679e-49 | -8.615850e-47 |
| Msa0123310 | Msa1115500 | 0.809692 | 1.668812e-50 | -8.615850e-47 |
| Msa0123310 | Msa1116940 | -0.815690 | 8.122372e-52 | -8.615850e-47 |
| Msa0123310 | Msa1123440 | 0.824807 | 6.607332e-54 | -8.615850e-47 |
| Msa0123310 | Msa1123490 | 0.811247 | 7.703897e-51 | -8.615850e-47 |
| Msa0123310 | Msa1134430 | 0.803544 | 3.314147e-49 | -8.615850e-47 |
| Msa0123310 | Msa1136880 | -0.813926 | 1.998998e-51 | -8.615850e-47 |
| Msa0123310 | Msa1138730 | 0.822560 | 2.219346e-53 | -8.615850e-47 |
| Msa0123310 | Msa1155380 | 0.827071 | 1.915699e-54 | -8.615850e-47 |
| Msa0123310 | Msa1169780 | 0.842116 | 3.146185e-58 | -8.615850e-47 |
| Msa0123310 | Msa1181370 | 0.814492 | 1.498840e-51 | -8.615850e-47 |
| Msa0123310 | Msa1203090 | 0.823613 | 1.260308e-53 | -8.615850e-47 |
| Msa0123310 | Msa1203210 | 0.825646 | 4.184196e-54 | -8.615850e-47 |
| Msa0123310 | Msa1213470 | 0.817925 | 2.560541e-52 | -8.615850e-47 |
| Msa0123310 | Msa1215660 | 0.820782 | 5.716820e-53 | -8.615850e-47 |
| Msa0123310 | Msa1219530 | 0.826562 | 2.534162e-54 | -8.615850e-47 |
| Msa0123310 | Msa1255500 | 0.812987 | 3.214370e-51 | -8.615850e-47 |
| Msa0123310 | Msa1260520 | 0.804962 | 1.679160e-49 | -8.615850e-47 |
| Msa0123310 | Msa1295840 | 0.834733 | 2.526758e-56 | -8.615850e-47 |
| Msa0123310 | Msa1299220 | -0.805698 | 1.177332e-49 | -8.615850e-47 |
| Msa0123310 | Msa1300370 | 0.818455 | 1.942379e-52 | -8.615850e-47 |
| Msa0123310 | Msa1301410 | 0.803138 | 4.022697e-49 | -8.615850e-47 |
| Msa0123310 | Msa1305970 | 0.808229 | 3.431417e-50 | -8.615850e-47 |
| Msa0123310 | Msa1307110 | 0.830447 | 2.921309e-55 | -8.615850e-47 |
| Msa0123310 | Msa1320660 | 0.821851 | 3.241266e-53 | -8.615850e-47 |
| Msa0123310 | Msa1332340 | 0.819412 | 1.177529e-52 | -8.615850e-47 |
| Msa0123310 | Msa1333220 | 0.822406 | 2.409326e-53 | -8.615850e-47 |
| Msa0123310 | Msa1359880 | 0.846572 | 1.996093e-59 | -8.615850e-47 |
| Msa0123310 | Msa1363270 | 0.801025 | 1.093793e-48 | -8.615850e-47 |
| Msa0123310 | Msa1363280 | 0.828647 | 8.003886e-55 | -8.615850e-47 |
| Msa0123310 | Msa1374210 | 0.844511 | 7.226518e-59 | -8.615850e-47 |
| Msa0123310 | Msa1381300 | 0.826668 | 2.390895e-54 | -8.615850e-47 |
| Msa0123310 | Msa1381870 | 0.850789 | 1.353222e-60 | -8.615850e-47 |
| Msa0123310 | Msa1389670 | 0.806105 | 9.669251e-50 | -8.615850e-47 |
| Msa0123310 | Msa1392570 | 0.818780 | 1.639298e-52 | -8.615850e-47 |
| Msa0123310 | Msa1397560 | 0.813422 | 2.580618e-51 | -8.615850e-47 |
| Msa0123310 | Msa1398310 | 0.841476 | 4.644473e-58 | -8.615850e-47 |
| Msa0123310 | Msa1409360 | 0.826861 | 2.150215e-54 | -8.615850e-47 |
| Msa0123310 | Msa1412800 | 0.838503 | 2.766924e-57 | -8.615850e-47 |
| Msa0123310 | Msa1421520 | 0.842425 | 2.607060e-58 | -8.615850e-47 |
| Msa0123310 | Msa1426690 | 0.845297 | 4.435336e-59 | -8.615850e-47 |
| Msa0123310 | Msa1433060 | 0.851724 | 7.365841e-61 | -8.615850e-47 |
| Msa0123310 | Msa1441220 | 0.801083 | 1.064326e-48 | -8.615850e-47 |
| Msa0123310 | Msa1448410 | 0.805436 | 1.336003e-49 | -8.615850e-47 |
| Msa0123310 | Msa1448840 | 0.816055 | 6.736442e-52 | -8.615850e-47 |
| Msa0123310 | Msa1465700 | -0.819265 | 1.272074e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0123310 | MtrunA17_Chr1g0183881 | 96.718 | 457 | 15 | 0 | 1 | 457 | 1 | 457 | 0.0 | 907 |
| Msa0123310 | MtrunA17_Chr2g0293201 | 44.416 | 394 | 192 | 5 | 91 | 457 | 64 | 457 | 3.19e-117 | 352 |
| Msa0123310 | MtrunA17_Chr8g0385291 | 44.606 | 343 | 176 | 6 | 120 | 457 | 158 | 491 | 1.58e-96 | 300 |
| Msa0123310 | MtrunA17_Chr4g0014901 | 40.054 | 372 | 199 | 10 | 101 | 457 | 222 | 584 | 1.29e-88 | 282 |
| Msa0123310 | MtrunA17_Chr3g0131071 | 40.469 | 341 | 190 | 7 | 118 | 451 | 221 | 555 | 2.84e-84 | 270 |
| Msa0123310 | MtrunA17_Chr4g0004981 | 38.279 | 337 | 194 | 6 | 129 | 457 | 107 | 437 | 4.47e-80 | 255 |
| Msa0123310 | MtrunA17_Chr4g0014911 | 41.420 | 338 | 186 | 5 | 128 | 457 | 121 | 454 | 2.94e-76 | 246 |
| Msa0123310 | MtrunA17_Chr7g0243541 | 31.594 | 345 | 184 | 6 | 118 | 457 | 87 | 384 | 7.30e-53 | 183 |
| Msa0123310 | MtrunA17_Chr3g0131581 | 28.507 | 221 | 129 | 9 | 142 | 353 | 62 | 262 | 2.31e-13 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0123310 | AT1G30690.1 | 45.808 | 334 | 171 | 5 | 128 | 457 | 201 | 528 | 1.70e-100 | 311 |
| Msa0123310 | AT1G30690.2 | 45.808 | 334 | 171 | 5 | 128 | 457 | 201 | 528 | 1.70e-100 | 311 |
| Msa0123310 | AT4G09160.3 | 44.838 | 339 | 167 | 6 | 131 | 457 | 301 | 631 | 4.14e-90 | 287 |
| Msa0123310 | AT4G09160.2 | 44.838 | 339 | 167 | 6 | 131 | 457 | 301 | 631 | 4.46e-90 | 287 |
| Msa0123310 | AT4G09160.1 | 44.838 | 339 | 167 | 6 | 131 | 457 | 326 | 656 | 5.51e-90 | 288 |
| Msa0123310 | AT1G72160.1 | 38.667 | 375 | 205 | 6 | 91 | 457 | 124 | 481 | 3.56e-83 | 265 |
| Msa0123310 | AT3G51670.1 | 40.060 | 332 | 188 | 6 | 132 | 457 | 69 | 395 | 3.55e-79 | 252 |
| Msa0123310 | AT1G22530.2 | 34.670 | 349 | 207 | 9 | 120 | 457 | 303 | 641 | 1.95e-64 | 220 |
| Msa0123310 | AT1G22530.1 | 34.670 | 349 | 207 | 9 | 120 | 457 | 337 | 675 | 2.45e-64 | 220 |
| Msa0123310 | AT1G72150.1 | 33.134 | 335 | 205 | 8 | 131 | 457 | 243 | 566 | 9.79e-58 | 200 |
Find 97 sgRNAs with CRISPR-Local
Find 302 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTATTGAGGAAATTCTTAA+AGG | 0.227165 | 1_3:+50308466 | Msa0123310:CDS |
| AAAATTCAAGAAGCAATTAT+TGG | 0.227229 | 1_3:+50308320 | Msa0123310:CDS |
| TTGTTAGGTGAAGGAGAAAA+AGG | 0.245387 | 1_3:+50308350 | Msa0123310:CDS |
| ATCTTAGAGATATTACATTA+TGG | 0.248604 | 1_3:+50308399 | Msa0123310:CDS |
| TAAAATTCTTGATGAAGATT+TGG | 0.250588 | 1_3:+50308565 | Msa0123310:CDS |
| ATAGTAATAACAGTTGAAAA+TGG | 0.282119 | 1_3:+50309960 | Msa0123310:CDS |
| TGGGGTTGATGGAATTATTC+AGG | 0.282362 | 1_3:+50308784 | Msa0123310:CDS |
| AGCTCTTTCATTCCTTGAAT+TGG | 0.286220 | 1_3:-50308827 | None:intergenic |
| TTGTAGTAAATGCACCATTT+TGG | 0.309402 | 1_3:+50309052 | Msa0123310:CDS |
| TTCTGGCAAATTCTCGTTGC+CGG | 0.319245 | 1_3:+50308034 | Msa0123310:CDS |
| ATTATTGGAAAATATTTGTT+AGG | 0.321956 | 1_3:+50308335 | Msa0123310:CDS |
| AAAATTCTTGATGAAGATTT+GGG | 0.329182 | 1_3:+50308566 | Msa0123310:CDS |
| AAGAAACTTGTTATGATTTG+TGG | 0.333859 | 1_3:-50307953 | None:intergenic |
| GCTCAACTCCGTCAGCAAAA+AGG | 0.352272 | 1_3:+50308847 | Msa0123310:CDS |
| AGAGGGTGCAGAGGATGGGG+AGG | 0.358125 | 1_3:-50307997 | None:intergenic |
| AACACTCACCTGAGAAGAAT+TGG | 0.366039 | 1_3:-50309162 | None:intergenic |
| TTGTATGAACATTCATCATT+TGG | 0.366571 | 1_3:-50309864 | None:intergenic |
| ACGAGAATTTGCCAGAAAAC+TGG | 0.369041 | 1_3:-50308028 | None:intergenic |
| TGTGCTCTACTTGGTAATAA+AGG | 0.369694 | 1_3:-50308428 | None:intergenic |
| TCTTAGAGATATTACATTAT+GGG | 0.371202 | 1_3:+50308400 | Msa0123310:CDS |
| GAGATGGAGGATTCAATTGA+TGG | 0.376525 | 1_3:+50308730 | Msa0123310:CDS |
| AATTTGTACAAGAAGACATT+TGG | 0.376644 | 1_3:+50308680 | Msa0123310:CDS |
| GAGCATCTTCCAGCTGGATA+TGG | 0.380972 | 1_3:+50309276 | Msa0123310:CDS |
| AATTTCATGTTGGTAGCTTC+TGG | 0.400803 | 1_3:-50310116 | None:intergenic |
| GCAGAGGATGGGGAGGGATC+AGG | 0.403068 | 1_3:-50307990 | None:intergenic |
| AGCCTAATCTCTGCAGGACT+TGG | 0.407088 | 1_3:-50308263 | None:intergenic |
| CAGCTGGATATGGTGGTCTA+AGG | 0.408968 | 1_3:+50309286 | Msa0123310:CDS |
| TATCCAGCTGGAAGATGCTC+TGG | 0.411235 | 1_3:-50309273 | None:intergenic |
| CTACAAAACCAAAGTGTTGT+TGG | 0.411528 | 1_3:+50309894 | Msa0123310:CDS |
| AGCTACCAACATGAAATTGA+TGG | 0.418460 | 1_3:+50310121 | Msa0123310:CDS |
| TTGAAAAGTGCACCAATTCA+AGG | 0.425968 | 1_3:+50308815 | Msa0123310:CDS |
| TGTGAAGTGTAGAGCCAAAA+TGG | 0.434368 | 1_3:-50309066 | None:intergenic |
| CAAGAGAAAGAAATCATTGT+TGG | 0.439581 | 1_3:+50308286 | Msa0123310:CDS |
| TAGTAATAACAGTTGAAAAT+GGG | 0.440697 | 1_3:+50309961 | Msa0123310:CDS |
| TGTTACAGAAGACATTGGTT+TGG | 0.442089 | 1_3:+50308522 | Msa0123310:CDS |
| TGGAAGAGGGTGCAGAGGAT+GGG | 0.446081 | 1_3:-50308001 | None:intergenic |
| AGAAAACTGGAGCATGGAAG+AGG | 0.447135 | 1_3:-50308015 | None:intergenic |
| TGCTCTAAAACTTTATCATC+AGG | 0.448465 | 1_3:-50309333 | None:intergenic |
| CTCTTGAGCCTAATCTCTGC+AGG | 0.448756 | 1_3:-50308269 | None:intergenic |
| GGAAAATATTTGTTAGGTGA+AGG | 0.449552 | 1_3:+50308341 | Msa0123310:CDS |
| ATGGAAGAGGGTGCAGAGGA+TGG | 0.462405 | 1_3:-50308002 | None:intergenic |
| CGTTGCCGGAAAATCCGATC+AGG | 0.466677 | 1_3:+50308048 | Msa0123310:CDS |
| AGAATTGGTGTGACCCTTTG+TGG | 0.480253 | 1_3:-50309147 | None:intergenic |
| GGCCCAGAGCATCTTCCAGC+TGG | 0.482220 | 1_3:+50309270 | Msa0123310:CDS |
| TAGTGATGTGGAACGAGAAT+TGG | 0.486000 | 1_3:+50308217 | Msa0123310:CDS |
| CTCATGGCCTCTTCCCTGAT+CGG | 0.487905 | 1_3:-50308062 | None:intergenic |
| TGGGGAGGGATCAGGAAAGA+TGG | 0.488831 | 1_3:-50307982 | None:intergenic |
| GGAAGAGGGTGCAGAGGATG+GGG | 0.492693 | 1_3:-50308000 | None:intergenic |
| GTACCTTCATGTGCTCTACT+TGG | 0.495591 | 1_3:-50308437 | None:intergenic |
| ATATTTGGATAGTAGAGATA+AGG | 0.496144 | 1_3:+50308610 | Msa0123310:CDS |
| ACTGTTATTACTATCTTCCC+TGG | 0.497920 | 1_3:-50309951 | None:intergenic |
| TGACCCTTTGTGGTCTTGCA+AGG | 0.502712 | 1_3:-50309137 | None:intergenic |
| TGCTGTCACCAACAACACTT+TGG | 0.503098 | 1_3:-50309902 | None:intergenic |
| GGGTCACACCAATTCTTCTC+AGG | 0.506747 | 1_3:+50309154 | Msa0123310:CDS |
| CACCAAGTCCTGCAGAGATT+AGG | 0.512586 | 1_3:+50308261 | Msa0123310:CDS |
| TTGTTGAGCACCTCATTGAC+AGG | 0.517442 | 1_3:-50309393 | None:intergenic |
| CATCCTTGCAAGACCACAAA+GGG | 0.520308 | 1_3:+50309134 | Msa0123310:CDS |
| CTTCACAAGTGTTATTCTCA+AGG | 0.523067 | 1_3:+50309082 | Msa0123310:CDS |
| ATGAAATGTCACAGGTACAT+AGG | 0.530202 | 1_3:+50309249 | Msa0123310:intron |
| TTGGTTGATGATGATGAGGT+AGG | 0.531055 | 1_3:+50308236 | Msa0123310:CDS |
| ATGTGGGACATAACTGTTGT+TGG | 0.536809 | 1_3:+50309810 | Msa0123310:CDS |
| GGAAAATCCGATCAGGGAAG+AGG | 0.541733 | 1_3:+50308055 | Msa0123310:CDS |
| CTTAGAGATATTACATTATG+GGG | 0.542377 | 1_3:+50308401 | Msa0123310:CDS |
| ATGTTCATCATTGCATTCAT+CGG | 0.544558 | 1_3:-50308090 | None:intergenic |
| GGACATAACTGTTGTTGGAT+GGG | 0.553153 | 1_3:+50309815 | Msa0123310:CDS |
| GCATTCATCGGTATCACTCA+TGG | 0.553380 | 1_3:-50308078 | None:intergenic |
| TGGTTGATGATGATGAGGTA+GGG | 0.556544 | 1_3:+50308237 | Msa0123310:CDS |
| TCGTAAACATAGTAACAAAC+CGG | 0.557690 | 1_3:-50308641 | None:intergenic |
| TAGAGATAAGGAAGGTCGAC+CGG | 0.565192 | 1_3:+50308622 | Msa0123310:CDS |
| CTTAGACCACCATATCCAGC+TGG | 0.567452 | 1_3:-50309285 | None:intergenic |
| CATCTTCCAGCTGGATATGG+TGG | 0.574311 | 1_3:+50309279 | Msa0123310:CDS |
| ATCCAGCTGGAAGATGCTCT+GGG | 0.577545 | 1_3:-50309272 | None:intergenic |
| TTCTGCCATCAATTTCATGT+TGG | 0.581698 | 1_3:-50310126 | None:intergenic |
| TGACATGTTACAGAAGACAT+TGG | 0.594854 | 1_3:+50308517 | Msa0123310:CDS |
| CTGGATATGGTGGTCTAAGG+AGG | 0.598272 | 1_3:+50309289 | Msa0123310:CDS |
| TGGATGGGAGGTGATTTACA+AGG | 0.598715 | 1_3:+50309830 | Msa0123310:CDS |
| GAGGGTGCAGAGGATGGGGA+GGG | 0.602354 | 1_3:-50307996 | None:intergenic |
| GTTGTTTCAAAGCTATTACC+CGG | 0.610480 | 1_3:+50308877 | Msa0123310:CDS |
| TTTGCCAGAAAACTGGAGCA+TGG | 0.611039 | 1_3:-50308021 | None:intergenic |
| AGACTGGAGTGACAATAATG+TGG | 0.612074 | 1_3:+50309793 | Msa0123310:intron |
| CATAACTGTTGTTGGATGGG+AGG | 0.613416 | 1_3:+50309818 | Msa0123310:CDS |
| GACTGGAGTGACAATAATGT+GGG | 0.615833 | 1_3:+50309794 | Msa0123310:intron |
| AGTTGAATTTCCTGTCAATG+AGG | 0.616951 | 1_3:+50309383 | Msa0123310:CDS |
| GGGACATAACTGTTGTTGGA+TGG | 0.617419 | 1_3:+50309814 | Msa0123310:CDS |
| GAAAACTGGAGCATGGAAGA+GGG | 0.617854 | 1_3:-50308014 | None:intergenic |
| TTGGATAGTAGAGATAAGGA+AGG | 0.628322 | 1_3:+50308614 | Msa0123310:CDS |
| TCATGATCTTGTTAGTGATG+TGG | 0.637441 | 1_3:+50308205 | Msa0123310:CDS |
| GAGCATGGAAGAGGGTGCAG+AGG | 0.648042 | 1_3:-50308006 | None:intergenic |
| TCAAATAAGACTTATCAATG+AGG | 0.649999 | 1_3:+50308154 | Msa0123310:CDS |
| TTACCAAGTAGAGCACATGA+AGG | 0.650198 | 1_3:+50308434 | Msa0123310:CDS |
| AAGGTACTGATATTGTATTG+AGG | 0.652952 | 1_3:+50308453 | Msa0123310:CDS |
| GTTGCCGGAAAATCCGATCA+GGG | 0.653037 | 1_3:+50308049 | Msa0123310:CDS |
| TCATCCTTGCAAGACCACAA+AGG | 0.655234 | 1_3:+50309133 | Msa0123310:CDS |
| GGTTTGTTACTATGTTTACG+AGG | 0.673551 | 1_3:+50308643 | Msa0123310:CDS |
| AGAATTGGTTGATGATGATG+AGG | 0.676048 | 1_3:+50308232 | Msa0123310:CDS |
| GATGAATGCAATGATGAACA+TGG | 0.677939 | 1_3:+50308092 | Msa0123310:CDS |
| ATGAATGCAATGATGAACAT+GGG | 0.696221 | 1_3:+50308093 | Msa0123310:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATTGGAAAATATTTGTT+AGG | + | chr1_3:50308335-50308354 | Msa0123310:CDS | 15.0% |
| !! | AATTGAGTAAATATCTAAAT+TGG | - | chr1_3:50309721-50309740 | None:intergenic | 15.0% |
| !! | AAAGAAATAAATTAGAACAA+AGG | - | chr1_3:50309764-50309783 | None:intergenic | 15.0% |
| !! | ATTATTGGAAAATATTTGTT+AGG | + | chr1_3:50308335-50308354 | Msa0123310:CDS | 15.0% |
| !! | AATTGAGTAAATATCTAAAT+TGG | - | chr1_3:50309721-50309740 | None:intergenic | 15.0% |
| !! | AAAGAAATAAATTAGAACAA+AGG | - | chr1_3:50309764-50309783 | None:intergenic | 15.0% |
| !!! | AGATAATTTTTATGTGATGA+TGG | - | chr1_3:50307928-50307947 | None:intergenic | 20.0% |
| !! | ATCATCACATAAAAATTATC+TGG | + | chr1_3:50307927-50307946 | Msa0123310:five_prime_UTR | 20.0% |
| !!! | GATTTTCATTGAAATCTAAA+TGG | - | chr1_3:50308136-50308155 | None:intergenic | 20.0% |
| !! | AAAATTCAAGAAGCAATTAT+TGG | + | chr1_3:50308320-50308339 | Msa0123310:CDS | 20.0% |
| !! | ATCTTAGAGATATTACATTA+TGG | + | chr1_3:50308399-50308418 | Msa0123310:CDS | 20.0% |
| !! | TCTTAGAGATATTACATTAT+GGG | + | chr1_3:50308400-50308419 | Msa0123310:CDS | 20.0% |
| !! | TAAAATTCTTGATGAAGATT+TGG | + | chr1_3:50308565-50308584 | Msa0123310:CDS | 20.0% |
| !! | AAAATTCTTGATGAAGATTT+GGG | + | chr1_3:50308566-50308585 | Msa0123310:CDS | 20.0% |
| !!! | TTTTGAAAAAGTTGGATATT+TGG | + | chr1_3:50308595-50308614 | Msa0123310:CDS | 20.0% |
| !!! | ACATTTTTATAAACTATCTC+CGG | - | chr1_3:50308899-50308918 | None:intergenic | 20.0% |
| !!! | TTTTGTCTAAATATCAAATC+CGG | + | chr1_3:50309483-50309502 | Msa0123310:intron | 20.0% |
| !!! | AAATTGGTCTTTGAAATTAT+AGG | - | chr1_3:50309705-50309724 | None:intergenic | 20.0% |
| !! | ATAGTAATAACAGTTGAAAA+TGG | + | chr1_3:50309960-50309979 | Msa0123310:CDS | 20.0% |
| !! | TAGTAATAACAGTTGAAAAT+GGG | + | chr1_3:50309961-50309980 | Msa0123310:CDS | 20.0% |
| !!! | TATATTTTTTTGCATTCAGT+AGG | + | chr1_3:50310093-50310112 | Msa0123310:intron | 20.0% |
| !!! | AGATAATTTTTATGTGATGA+TGG | - | chr1_3:50307928-50307947 | None:intergenic | 20.0% |
| !! | ATCATCACATAAAAATTATC+TGG | + | chr1_3:50307927-50307946 | Msa0123310:five_prime_UTR | 20.0% |
| !!! | GATTTTCATTGAAATCTAAA+TGG | - | chr1_3:50308136-50308155 | None:intergenic | 20.0% |
| !! | AAAATTCAAGAAGCAATTAT+TGG | + | chr1_3:50308320-50308339 | Msa0123310:CDS | 20.0% |
| !! | ATCTTAGAGATATTACATTA+TGG | + | chr1_3:50308399-50308418 | Msa0123310:CDS | 20.0% |
| !! | TCTTAGAGATATTACATTAT+GGG | + | chr1_3:50308400-50308419 | Msa0123310:CDS | 20.0% |
| !! | TAAAATTCTTGATGAAGATT+TGG | + | chr1_3:50308565-50308584 | Msa0123310:CDS | 20.0% |
| !! | AAAATTCTTGATGAAGATTT+GGG | + | chr1_3:50308566-50308585 | Msa0123310:CDS | 20.0% |
| !!! | TTTTGAAAAAGTTGGATATT+TGG | + | chr1_3:50308595-50308614 | Msa0123310:CDS | 20.0% |
| !!! | ACATTTTTATAAACTATCTC+CGG | - | chr1_3:50308899-50308918 | None:intergenic | 20.0% |
| !!! | TTTTGTCTAAATATCAAATC+CGG | + | chr1_3:50309483-50309502 | Msa0123310:intron | 20.0% |
| !!! | AAATTGGTCTTTGAAATTAT+AGG | - | chr1_3:50309705-50309724 | None:intergenic | 20.0% |
| !! | ATAGTAATAACAGTTGAAAA+TGG | + | chr1_3:50309960-50309979 | Msa0123310:CDS | 20.0% |
| !! | TAGTAATAACAGTTGAAAAT+GGG | + | chr1_3:50309961-50309980 | Msa0123310:CDS | 20.0% |
| !!! | TATATTTTTTTGCATTCAGT+AGG | + | chr1_3:50310093-50310112 | Msa0123310:intron | 20.0% |
| !!! | AAGAAACTTGTTATGATTTG+TGG | - | chr1_3:50307956-50307975 | None:intergenic | 25.0% |
| ! | TCAAATAAGACTTATCAATG+AGG | + | chr1_3:50308154-50308173 | Msa0123310:CDS | 25.0% |
| ! | AGAAAAAATTTCATTGCCAA+AGG | + | chr1_3:50308373-50308392 | Msa0123310:CDS | 25.0% |
| !!! | ATATCTCTAAGATTTTCCTT+TGG | - | chr1_3:50308392-50308411 | None:intergenic | 25.0% |
| ! | CTTAGAGATATTACATTATG+GGG | + | chr1_3:50308401-50308420 | Msa0123310:CDS | 25.0% |
| ! | TGTATTGAGGAAATTCTTAA+AGG | + | chr1_3:50308466-50308485 | Msa0123310:CDS | 25.0% |
| ! | ATATTTGGATAGTAGAGATA+AGG | + | chr1_3:50308610-50308629 | Msa0123310:CDS | 25.0% |
| ! | AATTTGTACAAGAAGACATT+TGG | + | chr1_3:50308680-50308699 | Msa0123310:CDS | 25.0% |
| !!! | ATTAAGAAGTTGAGTTTTAG+AGG | + | chr1_3:50308761-50308780 | Msa0123310:CDS | 25.0% |
| !! | CATTTTTATAAACTATCTCC+GGG | - | chr1_3:50308898-50308917 | None:intergenic | 25.0% |
| ! | TTTGTGAAGCTAATAAATTG+TGG | + | chr1_3:50308967-50308986 | Msa0123310:intron | 25.0% |
| ! | TTAACATTATGAAATGTCAC+AGG | + | chr1_3:50309241-50309260 | Msa0123310:intron | 25.0% |
| ! | TAATATTGTGAATGATGCAT+TGG | - | chr1_3:50309610-50309629 | None:intergenic | 25.0% |
| ! | TTCCAAAATGATATATGTAG+GGG | - | chr1_3:50309643-50309662 | None:intergenic | 25.0% |
| ! | CTTCCAAAATGATATATGTA+GGG | - | chr1_3:50309644-50309663 | None:intergenic | 25.0% |
| ! | TCTTCCAAAATGATATATGT+AGG | - | chr1_3:50309645-50309664 | None:intergenic | 25.0% |
| ! | TTGTATGAACATTCATCATT+TGG | - | chr1_3:50309867-50309886 | None:intergenic | 25.0% |
| !! | TCTTTTTACATAAATGAACC+AGG | + | chr1_3:50309933-50309952 | Msa0123310:CDS | 25.0% |
| !! | CTTTTTACATAAATGAACCA+GGG | + | chr1_3:50309934-50309953 | Msa0123310:CDS | 25.0% |
| ! | TATGATAGCAAAATGAACAT+TGG | - | chr1_3:50310038-50310057 | None:intergenic | 25.0% |
| ! | TACAATATCTTCAAATGAAG+TGG | - | chr1_3:50310075-50310094 | None:intergenic | 25.0% |
| !!! | AAGAAACTTGTTATGATTTG+TGG | - | chr1_3:50307956-50307975 | None:intergenic | 25.0% |
| ! | TCAAATAAGACTTATCAATG+AGG | + | chr1_3:50308154-50308173 | Msa0123310:CDS | 25.0% |
| ! | AGAAAAAATTTCATTGCCAA+AGG | + | chr1_3:50308373-50308392 | Msa0123310:CDS | 25.0% |
| !!! | ATATCTCTAAGATTTTCCTT+TGG | - | chr1_3:50308392-50308411 | None:intergenic | 25.0% |
| ! | CTTAGAGATATTACATTATG+GGG | + | chr1_3:50308401-50308420 | Msa0123310:CDS | 25.0% |
| ! | TGTATTGAGGAAATTCTTAA+AGG | + | chr1_3:50308466-50308485 | Msa0123310:CDS | 25.0% |
| ! | ATATTTGGATAGTAGAGATA+AGG | + | chr1_3:50308610-50308629 | Msa0123310:CDS | 25.0% |
| ! | AATTTGTACAAGAAGACATT+TGG | + | chr1_3:50308680-50308699 | Msa0123310:CDS | 25.0% |
| !!! | ATTAAGAAGTTGAGTTTTAG+AGG | + | chr1_3:50308761-50308780 | Msa0123310:CDS | 25.0% |
| !! | CATTTTTATAAACTATCTCC+GGG | - | chr1_3:50308898-50308917 | None:intergenic | 25.0% |
| ! | TTTGTGAAGCTAATAAATTG+TGG | + | chr1_3:50308967-50308986 | Msa0123310:intron | 25.0% |
| ! | TTAACATTATGAAATGTCAC+AGG | + | chr1_3:50309241-50309260 | Msa0123310:intron | 25.0% |
| ! | TAATATTGTGAATGATGCAT+TGG | - | chr1_3:50309610-50309629 | None:intergenic | 25.0% |
| ! | TTCCAAAATGATATATGTAG+GGG | - | chr1_3:50309643-50309662 | None:intergenic | 25.0% |
| ! | CTTCCAAAATGATATATGTA+GGG | - | chr1_3:50309644-50309663 | None:intergenic | 25.0% |
| ! | TCTTCCAAAATGATATATGT+AGG | - | chr1_3:50309645-50309664 | None:intergenic | 25.0% |
| ! | TTGTATGAACATTCATCATT+TGG | - | chr1_3:50309867-50309886 | None:intergenic | 25.0% |
| !! | TCTTTTTACATAAATGAACC+AGG | + | chr1_3:50309933-50309952 | Msa0123310:CDS | 25.0% |
| !! | CTTTTTACATAAATGAACCA+GGG | + | chr1_3:50309934-50309953 | Msa0123310:CDS | 25.0% |
| ! | TATGATAGCAAAATGAACAT+TGG | - | chr1_3:50310038-50310057 | None:intergenic | 25.0% |
| ! | TACAATATCTTCAAATGAAG+TGG | - | chr1_3:50310075-50310094 | None:intergenic | 25.0% |
| ATGTTCATCATTGCATTCAT+CGG | - | chr1_3:50308093-50308112 | None:intergenic | 30.0% | |
| ATGAATGCAATGATGAACAT+GGG | + | chr1_3:50308093-50308112 | Msa0123310:CDS | 30.0% | |
| CAAGAGAAAGAAATCATTGT+TGG | + | chr1_3:50308286-50308305 | Msa0123310:CDS | 30.0% | |
| ! | GGAAAATATTTGTTAGGTGA+AGG | + | chr1_3:50308341-50308360 | Msa0123310:CDS | 30.0% |
| !! | AAGGTACTGATATTGTATTG+AGG | + | chr1_3:50308453-50308472 | Msa0123310:CDS | 30.0% |
| !! | GGTTCTGATTTTGAAAAAGT+TGG | + | chr1_3:50308587-50308606 | Msa0123310:CDS | 30.0% |
| TCGTAAACATAGTAACAAAC+CGG | - | chr1_3:50308644-50308663 | None:intergenic | 30.0% | |
| !!! | AATGTGACTTGTTTTTGAGA+TGG | + | chr1_3:50308714-50308733 | Msa0123310:CDS | 30.0% |
| ATTTACTACAATCTGCAAAC+AGG | - | chr1_3:50309043-50309062 | None:intergenic | 30.0% | |
| ! | TTGTAGTAAATGCACCATTT+TGG | + | chr1_3:50309052-50309071 | Msa0123310:CDS | 30.0% |
| !! | TGAACTTCTTTTTGTTTCTC+TGG | - | chr1_3:50309116-50309135 | None:intergenic | 30.0% |
| TATCATCAGGAGAAAAATCT+TGG | - | chr1_3:50309323-50309342 | None:intergenic | 30.0% | |
| !! | TGCTCTAAAACTTTATCATC+AGG | - | chr1_3:50309336-50309355 | None:intergenic | 30.0% |
| !! | GTCTTTGAAATTATAGGACA+AGG | - | chr1_3:50309699-50309718 | None:intergenic | 30.0% |
| ACTCAATTTATCAACCATGT+TGG | + | chr1_3:50309733-50309752 | Msa0123310:intron | 30.0% | |
| ATGTTCATCATTGCATTCAT+CGG | - | chr1_3:50308093-50308112 | None:intergenic | 30.0% | |
| ATGAATGCAATGATGAACAT+GGG | + | chr1_3:50308093-50308112 | Msa0123310:CDS | 30.0% | |
| CAAGAGAAAGAAATCATTGT+TGG | + | chr1_3:50308286-50308305 | Msa0123310:CDS | 30.0% | |
| ! | GGAAAATATTTGTTAGGTGA+AGG | + | chr1_3:50308341-50308360 | Msa0123310:CDS | 30.0% |
| !! | AAGGTACTGATATTGTATTG+AGG | + | chr1_3:50308453-50308472 | Msa0123310:CDS | 30.0% |
| !! | GGTTCTGATTTTGAAAAAGT+TGG | + | chr1_3:50308587-50308606 | Msa0123310:CDS | 30.0% |
| TCGTAAACATAGTAACAAAC+CGG | - | chr1_3:50308644-50308663 | None:intergenic | 30.0% | |
| !!! | AATGTGACTTGTTTTTGAGA+TGG | + | chr1_3:50308714-50308733 | Msa0123310:CDS | 30.0% |
| ATTTACTACAATCTGCAAAC+AGG | - | chr1_3:50309043-50309062 | None:intergenic | 30.0% | |
| ! | TTGTAGTAAATGCACCATTT+TGG | + | chr1_3:50309052-50309071 | Msa0123310:CDS | 30.0% |
| !! | TGAACTTCTTTTTGTTTCTC+TGG | - | chr1_3:50309116-50309135 | None:intergenic | 30.0% |
| TATCATCAGGAGAAAAATCT+TGG | - | chr1_3:50309323-50309342 | None:intergenic | 30.0% | |
| !! | TGCTCTAAAACTTTATCATC+AGG | - | chr1_3:50309336-50309355 | None:intergenic | 30.0% |
| !! | GTCTTTGAAATTATAGGACA+AGG | - | chr1_3:50309699-50309718 | None:intergenic | 30.0% |
| ACTCAATTTATCAACCATGT+TGG | + | chr1_3:50309733-50309752 | Msa0123310:intron | 30.0% | |
| GATGAATGCAATGATGAACA+TGG | + | chr1_3:50308092-50308111 | Msa0123310:CDS | 35.0% | |
| TCATGATCTTGTTAGTGATG+TGG | + | chr1_3:50308205-50308224 | Msa0123310:CDS | 35.0% | |
| !! | AGAATTGGTTGATGATGATG+AGG | + | chr1_3:50308232-50308251 | Msa0123310:CDS | 35.0% |
| TTGTTAGGTGAAGGAGAAAA+AGG | + | chr1_3:50308350-50308369 | Msa0123310:CDS | 35.0% | |
| ! | TGTGCTCTACTTGGTAATAA+AGG | - | chr1_3:50308431-50308450 | None:intergenic | 35.0% |
| TGACATGTTACAGAAGACAT+TGG | + | chr1_3:50308517-50308536 | Msa0123310:CDS | 35.0% | |
| ! | TGTTACAGAAGACATTGGTT+TGG | + | chr1_3:50308522-50308541 | Msa0123310:CDS | 35.0% |
| TTGGATAGTAGAGATAAGGA+AGG | + | chr1_3:50308614-50308633 | Msa0123310:CDS | 35.0% | |
| !! | GGTTTGTTACTATGTTTACG+AGG | + | chr1_3:50308643-50308662 | Msa0123310:CDS | 35.0% |
| !!! | AAGAAGTTGAGTTTTAGAGG+TGG | + | chr1_3:50308764-50308783 | Msa0123310:CDS | 35.0% |
| !!! | AGAAGTTGAGTTTTAGAGGT+GGG | + | chr1_3:50308765-50308784 | Msa0123310:CDS | 35.0% |
| ! | TTGAAAAGTGCACCAATTCA+AGG | + | chr1_3:50308815-50308834 | Msa0123310:CDS | 35.0% |
| AGCTCTTTCATTCCTTGAAT+TGG | - | chr1_3:50308830-50308849 | None:intergenic | 35.0% | |
| ! | GTTGTTTCAAAGCTATTACC+CGG | + | chr1_3:50308877-50308896 | Msa0123310:CDS | 35.0% |
| ! | CTTCACAAGTGTTATTCTCA+AGG | + | chr1_3:50309082-50309101 | Msa0123310:CDS | 35.0% |
| ATGAAATGTCACAGGTACAT+AGG | + | chr1_3:50309249-50309268 | Msa0123310:intron | 35.0% | |
| AGTTGAATTTCCTGTCAATG+AGG | + | chr1_3:50309383-50309402 | Msa0123310:CDS | 35.0% | |
| GATACAACCCTAAAACTTCA+AGG | - | chr1_3:50309510-50309529 | None:intergenic | 35.0% | |
| !! | TTCCATGAGTCATTTTGGAA+CGG | - | chr1_3:50309542-50309561 | None:intergenic | 35.0% |
| ! | TGCCCCTACATATATCATTT+TGG | + | chr1_3:50309638-50309657 | Msa0123310:intron | 35.0% |
| TTTCTTTGATGTGTCTAGAC+TGG | + | chr1_3:50309777-50309796 | Msa0123310:intron | 35.0% | |
| !! | CTACAAAACCAAAGTGTTGT+TGG | + | chr1_3:50309894-50309913 | Msa0123310:CDS | 35.0% |
| ACTGTTATTACTATCTTCCC+TGG | - | chr1_3:50309954-50309973 | None:intergenic | 35.0% | |
| !! | AATTTCATGTTGGTAGCTTC+TGG | - | chr1_3:50310119-50310138 | None:intergenic | 35.0% |
| AGCTACCAACATGAAATTGA+TGG | + | chr1_3:50310121-50310140 | Msa0123310:CDS | 35.0% | |
| TTCTGCCATCAATTTCATGT+TGG | - | chr1_3:50310129-50310148 | None:intergenic | 35.0% | |
| GATGAATGCAATGATGAACA+TGG | + | chr1_3:50308092-50308111 | Msa0123310:CDS | 35.0% | |
| TCATGATCTTGTTAGTGATG+TGG | + | chr1_3:50308205-50308224 | Msa0123310:CDS | 35.0% | |
| !! | AGAATTGGTTGATGATGATG+AGG | + | chr1_3:50308232-50308251 | Msa0123310:CDS | 35.0% |
| TTGTTAGGTGAAGGAGAAAA+AGG | + | chr1_3:50308350-50308369 | Msa0123310:CDS | 35.0% | |
| ! | TGTGCTCTACTTGGTAATAA+AGG | - | chr1_3:50308431-50308450 | None:intergenic | 35.0% |
| TGACATGTTACAGAAGACAT+TGG | + | chr1_3:50308517-50308536 | Msa0123310:CDS | 35.0% | |
| ! | TGTTACAGAAGACATTGGTT+TGG | + | chr1_3:50308522-50308541 | Msa0123310:CDS | 35.0% |
| TTGGATAGTAGAGATAAGGA+AGG | + | chr1_3:50308614-50308633 | Msa0123310:CDS | 35.0% | |
| !! | GGTTTGTTACTATGTTTACG+AGG | + | chr1_3:50308643-50308662 | Msa0123310:CDS | 35.0% |
| !!! | AAGAAGTTGAGTTTTAGAGG+TGG | + | chr1_3:50308764-50308783 | Msa0123310:CDS | 35.0% |
| !!! | AGAAGTTGAGTTTTAGAGGT+GGG | + | chr1_3:50308765-50308784 | Msa0123310:CDS | 35.0% |
| ! | TTGAAAAGTGCACCAATTCA+AGG | + | chr1_3:50308815-50308834 | Msa0123310:CDS | 35.0% |
| AGCTCTTTCATTCCTTGAAT+TGG | - | chr1_3:50308830-50308849 | None:intergenic | 35.0% | |
| ! | GTTGTTTCAAAGCTATTACC+CGG | + | chr1_3:50308877-50308896 | Msa0123310:CDS | 35.0% |
| ! | CTTCACAAGTGTTATTCTCA+AGG | + | chr1_3:50309082-50309101 | Msa0123310:CDS | 35.0% |
| ATGAAATGTCACAGGTACAT+AGG | + | chr1_3:50309249-50309268 | Msa0123310:intron | 35.0% | |
| AGTTGAATTTCCTGTCAATG+AGG | + | chr1_3:50309383-50309402 | Msa0123310:CDS | 35.0% | |
| GATACAACCCTAAAACTTCA+AGG | - | chr1_3:50309510-50309529 | None:intergenic | 35.0% | |
| !! | TTCCATGAGTCATTTTGGAA+CGG | - | chr1_3:50309542-50309561 | None:intergenic | 35.0% |
| ! | TGCCCCTACATATATCATTT+TGG | + | chr1_3:50309638-50309657 | Msa0123310:intron | 35.0% |
| TTTCTTTGATGTGTCTAGAC+TGG | + | chr1_3:50309777-50309796 | Msa0123310:intron | 35.0% | |
| !! | CTACAAAACCAAAGTGTTGT+TGG | + | chr1_3:50309894-50309913 | Msa0123310:CDS | 35.0% |
| ACTGTTATTACTATCTTCCC+TGG | - | chr1_3:50309954-50309973 | None:intergenic | 35.0% | |
| !! | AATTTCATGTTGGTAGCTTC+TGG | - | chr1_3:50310119-50310138 | None:intergenic | 35.0% |
| AGCTACCAACATGAAATTGA+TGG | + | chr1_3:50310121-50310140 | Msa0123310:CDS | 35.0% | |
| TTCTGCCATCAATTTCATGT+TGG | - | chr1_3:50310129-50310148 | None:intergenic | 35.0% | |
| ACGAGAATTTGCCAGAAAAC+TGG | - | chr1_3:50308031-50308050 | None:intergenic | 40.0% | |
| TAGTGATGTGGAACGAGAAT+TGG | + | chr1_3:50308217-50308236 | Msa0123310:CDS | 40.0% | |
| !! | TTGGTTGATGATGATGAGGT+AGG | + | chr1_3:50308236-50308255 | Msa0123310:CDS | 40.0% |
| !! | TGGTTGATGATGATGAGGTA+GGG | + | chr1_3:50308237-50308256 | Msa0123310:CDS | 40.0% |
| TTACCAAGTAGAGCACATGA+AGG | + | chr1_3:50308434-50308453 | Msa0123310:CDS | 40.0% | |
| !!! | GTGACTTGTTTTTGAGATGG+AGG | + | chr1_3:50308717-50308736 | Msa0123310:CDS | 40.0% |
| GAGATGGAGGATTCAATTGA+TGG | + | chr1_3:50308730-50308749 | Msa0123310:CDS | 40.0% | |
| !!! | GAAGTTGAGTTTTAGAGGTG+GGG | + | chr1_3:50308766-50308785 | Msa0123310:CDS | 40.0% |
| !! | TGGGGTTGATGGAATTATTC+AGG | + | chr1_3:50308784-50308803 | Msa0123310:CDS | 40.0% |
| TGTGAAGTGTAGAGCCAAAA+TGG | - | chr1_3:50309069-50309088 | None:intergenic | 40.0% | |
| AACACTCACCTGAGAAGAAT+TGG | - | chr1_3:50309165-50309184 | None:intergenic | 40.0% | |
| ! | AATCCGGTCCTTGAAGTTTT+AGG | + | chr1_3:50309499-50309518 | Msa0123310:intron | 40.0% |
| ! | ATCCGGTCCTTGAAGTTTTA+GGG | + | chr1_3:50309500-50309519 | Msa0123310:intron | 40.0% |
| AACCCTAAAACTTCAAGGAC+CGG | - | chr1_3:50309505-50309524 | None:intergenic | 40.0% | |
| !!! | TCCATGAGTCATTTTGGAAC+GGG | - | chr1_3:50309541-50309560 | None:intergenic | 40.0% |
| ! | TGCACTTCCATGAGTCATTT+TGG | - | chr1_3:50309547-50309566 | None:intergenic | 40.0% |
| GGATAACACATTCAGACAGA+GGG | - | chr1_3:50309589-50309608 | None:intergenic | 40.0% | |
| TGGATAACACATTCAGACAG+AGG | - | chr1_3:50309590-50309609 | None:intergenic | 40.0% | |
| GAACAAAGGAAAGTCCAACA+TGG | - | chr1_3:50309750-50309769 | None:intergenic | 40.0% | |
| AGACTGGAGTGACAATAATG+TGG | + | chr1_3:50309793-50309812 | Msa0123310:intron | 40.0% | |
| GACTGGAGTGACAATAATGT+GGG | + | chr1_3:50309794-50309813 | Msa0123310:intron | 40.0% | |
| ATGTGGGACATAACTGTTGT+TGG | + | chr1_3:50309810-50309829 | Msa0123310:CDS | 40.0% | |
| GGACATAACTGTTGTTGGAT+GGG | + | chr1_3:50309815-50309834 | Msa0123310:CDS | 40.0% | |
| ACGAGAATTTGCCAGAAAAC+TGG | - | chr1_3:50308031-50308050 | None:intergenic | 40.0% | |
| TAGTGATGTGGAACGAGAAT+TGG | + | chr1_3:50308217-50308236 | Msa0123310:CDS | 40.0% | |
| !! | TTGGTTGATGATGATGAGGT+AGG | + | chr1_3:50308236-50308255 | Msa0123310:CDS | 40.0% |
| !! | TGGTTGATGATGATGAGGTA+GGG | + | chr1_3:50308237-50308256 | Msa0123310:CDS | 40.0% |
| TTACCAAGTAGAGCACATGA+AGG | + | chr1_3:50308434-50308453 | Msa0123310:CDS | 40.0% | |
| !!! | GTGACTTGTTTTTGAGATGG+AGG | + | chr1_3:50308717-50308736 | Msa0123310:CDS | 40.0% |
| GAGATGGAGGATTCAATTGA+TGG | + | chr1_3:50308730-50308749 | Msa0123310:CDS | 40.0% | |
| !!! | GAAGTTGAGTTTTAGAGGTG+GGG | + | chr1_3:50308766-50308785 | Msa0123310:CDS | 40.0% |
| !! | TGGGGTTGATGGAATTATTC+AGG | + | chr1_3:50308784-50308803 | Msa0123310:CDS | 40.0% |
| TGTGAAGTGTAGAGCCAAAA+TGG | - | chr1_3:50309069-50309088 | None:intergenic | 40.0% | |
| AACACTCACCTGAGAAGAAT+TGG | - | chr1_3:50309165-50309184 | None:intergenic | 40.0% | |
| ! | AATCCGGTCCTTGAAGTTTT+AGG | + | chr1_3:50309499-50309518 | Msa0123310:intron | 40.0% |
| ! | ATCCGGTCCTTGAAGTTTTA+GGG | + | chr1_3:50309500-50309519 | Msa0123310:intron | 40.0% |
| AACCCTAAAACTTCAAGGAC+CGG | - | chr1_3:50309505-50309524 | None:intergenic | 40.0% | |
| !!! | TCCATGAGTCATTTTGGAAC+GGG | - | chr1_3:50309541-50309560 | None:intergenic | 40.0% |
| ! | TGCACTTCCATGAGTCATTT+TGG | - | chr1_3:50309547-50309566 | None:intergenic | 40.0% |
| GGATAACACATTCAGACAGA+GGG | - | chr1_3:50309589-50309608 | None:intergenic | 40.0% | |
| TGGATAACACATTCAGACAG+AGG | - | chr1_3:50309590-50309609 | None:intergenic | 40.0% | |
| GAACAAAGGAAAGTCCAACA+TGG | - | chr1_3:50309750-50309769 | None:intergenic | 40.0% | |
| AGACTGGAGTGACAATAATG+TGG | + | chr1_3:50309793-50309812 | Msa0123310:intron | 40.0% | |
| GACTGGAGTGACAATAATGT+GGG | + | chr1_3:50309794-50309813 | Msa0123310:intron | 40.0% | |
| ATGTGGGACATAACTGTTGT+TGG | + | chr1_3:50309810-50309829 | Msa0123310:CDS | 40.0% | |
| GGACATAACTGTTGTTGGAT+GGG | + | chr1_3:50309815-50309834 | Msa0123310:CDS | 40.0% | |
| GAAAACTGGAGCATGGAAGA+GGG | - | chr1_3:50308017-50308036 | None:intergenic | 45.0% | |
| AGAAAACTGGAGCATGGAAG+AGG | - | chr1_3:50308018-50308037 | None:intergenic | 45.0% | |
| ! | TCTTCCATGCTCCAGTTTTC+TGG | + | chr1_3:50308017-50308036 | Msa0123310:exon | 45.0% |
| TTTGCCAGAAAACTGGAGCA+TGG | - | chr1_3:50308024-50308043 | None:intergenic | 45.0% | |
| TTCTGGCAAATTCTCGTTGC+CGG | + | chr1_3:50308034-50308053 | Msa0123310:CDS | 45.0% | |
| ! | TCTTCCCTGATCGGATTTTC+CGG | - | chr1_3:50308056-50308075 | None:intergenic | 45.0% |
| GCATTCATCGGTATCACTCA+TGG | - | chr1_3:50308081-50308100 | None:intergenic | 45.0% | |
| GTACCTTCATGTGCTCTACT+TGG | - | chr1_3:50308440-50308459 | None:intergenic | 45.0% | |
| TAGAGATAAGGAAGGTCGAC+CGG | + | chr1_3:50308622-50308641 | Msa0123310:CDS | 45.0% | |
| !!! | AGTTTTAGAGGTGGGGTTGA+TGG | + | chr1_3:50308773-50308792 | Msa0123310:CDS | 45.0% |
| ! | CACAAGAGCCTTTTTGCTGA+CGG | - | chr1_3:50308858-50308877 | None:intergenic | 45.0% |
| TCATCCTTGCAAGACCACAA+AGG | + | chr1_3:50309133-50309152 | Msa0123310:CDS | 45.0% | |
| CATCCTTGCAAGACCACAAA+GGG | + | chr1_3:50309134-50309153 | Msa0123310:CDS | 45.0% | |
| AGAATTGGTGTGACCCTTTG+TGG | - | chr1_3:50309150-50309169 | None:intergenic | 45.0% | |
| TTGTTGAGCACCTCATTGAC+AGG | - | chr1_3:50309396-50309415 | None:intergenic | 45.0% | |
| !!! | CCATGAGTCATTTTGGAACG+GGG | - | chr1_3:50309540-50309559 | None:intergenic | 45.0% |
| GGGACATAACTGTTGTTGGA+TGG | + | chr1_3:50309814-50309833 | Msa0123310:CDS | 45.0% | |
| CATAACTGTTGTTGGATGGG+AGG | + | chr1_3:50309818-50309837 | Msa0123310:CDS | 45.0% | |
| TGGATGGGAGGTGATTTACA+AGG | + | chr1_3:50309830-50309849 | Msa0123310:CDS | 45.0% | |
| TGCTGTCACCAACAACACTT+TGG | - | chr1_3:50309905-50309924 | None:intergenic | 45.0% | |
| GAAAACTGGAGCATGGAAGA+GGG | - | chr1_3:50308017-50308036 | None:intergenic | 45.0% | |
| AGAAAACTGGAGCATGGAAG+AGG | - | chr1_3:50308018-50308037 | None:intergenic | 45.0% | |
| ! | TCTTCCATGCTCCAGTTTTC+TGG | + | chr1_3:50308017-50308036 | Msa0123310:exon | 45.0% |
| TTTGCCAGAAAACTGGAGCA+TGG | - | chr1_3:50308024-50308043 | None:intergenic | 45.0% | |
| TTCTGGCAAATTCTCGTTGC+CGG | + | chr1_3:50308034-50308053 | Msa0123310:CDS | 45.0% | |
| ! | TCTTCCCTGATCGGATTTTC+CGG | - | chr1_3:50308056-50308075 | None:intergenic | 45.0% |
| GCATTCATCGGTATCACTCA+TGG | - | chr1_3:50308081-50308100 | None:intergenic | 45.0% | |
| GTACCTTCATGTGCTCTACT+TGG | - | chr1_3:50308440-50308459 | None:intergenic | 45.0% | |
| TAGAGATAAGGAAGGTCGAC+CGG | + | chr1_3:50308622-50308641 | Msa0123310:CDS | 45.0% | |
| !!! | AGTTTTAGAGGTGGGGTTGA+TGG | + | chr1_3:50308773-50308792 | Msa0123310:CDS | 45.0% |
| ! | CACAAGAGCCTTTTTGCTGA+CGG | - | chr1_3:50308858-50308877 | None:intergenic | 45.0% |
| TCATCCTTGCAAGACCACAA+AGG | + | chr1_3:50309133-50309152 | Msa0123310:CDS | 45.0% | |
| CATCCTTGCAAGACCACAAA+GGG | + | chr1_3:50309134-50309153 | Msa0123310:CDS | 45.0% | |
| AGAATTGGTGTGACCCTTTG+TGG | - | chr1_3:50309150-50309169 | None:intergenic | 45.0% | |
| TTGTTGAGCACCTCATTGAC+AGG | - | chr1_3:50309396-50309415 | None:intergenic | 45.0% | |
| !!! | CCATGAGTCATTTTGGAACG+GGG | - | chr1_3:50309540-50309559 | None:intergenic | 45.0% |
| GGGACATAACTGTTGTTGGA+TGG | + | chr1_3:50309814-50309833 | Msa0123310:CDS | 45.0% | |
| CATAACTGTTGTTGGATGGG+AGG | + | chr1_3:50309818-50309837 | Msa0123310:CDS | 45.0% | |
| TGGATGGGAGGTGATTTACA+AGG | + | chr1_3:50309830-50309849 | Msa0123310:CDS | 45.0% | |
| TGCTGTCACCAACAACACTT+TGG | - | chr1_3:50309905-50309924 | None:intergenic | 45.0% | |
| GTTGCCGGAAAATCCGATCA+GGG | + | chr1_3:50308049-50308068 | Msa0123310:CDS | 50.0% | |
| GGAAAATCCGATCAGGGAAG+AGG | + | chr1_3:50308055-50308074 | Msa0123310:CDS | 50.0% | |
| CACCAAGTCCTGCAGAGATT+AGG | + | chr1_3:50308261-50308280 | Msa0123310:CDS | 50.0% | |
| AGCCTAATCTCTGCAGGACT+TGG | - | chr1_3:50308266-50308285 | None:intergenic | 50.0% | |
| CTCTTGAGCCTAATCTCTGC+AGG | - | chr1_3:50308272-50308291 | None:intergenic | 50.0% | |
| GCTCAACTCCGTCAGCAAAA+AGG | + | chr1_3:50308847-50308866 | Msa0123310:CDS | 50.0% | |
| ! | TGACCCTTTGTGGTCTTGCA+AGG | - | chr1_3:50309140-50309159 | None:intergenic | 50.0% |
| GGGTCACACCAATTCTTCTC+AGG | + | chr1_3:50309154-50309173 | Msa0123310:CDS | 50.0% | |
| ATCCAGCTGGAAGATGCTCT+GGG | - | chr1_3:50309275-50309294 | None:intergenic | 50.0% | |
| TATCCAGCTGGAAGATGCTC+TGG | - | chr1_3:50309276-50309295 | None:intergenic | 50.0% | |
| GAGCATCTTCCAGCTGGATA+TGG | + | chr1_3:50309276-50309295 | Msa0123310:CDS | 50.0% | |
| CATCTTCCAGCTGGATATGG+TGG | + | chr1_3:50309279-50309298 | Msa0123310:CDS | 50.0% | |
| CTTAGACCACCATATCCAGC+TGG | - | chr1_3:50309288-50309307 | None:intergenic | 50.0% | |
| CAGCTGGATATGGTGGTCTA+AGG | + | chr1_3:50309286-50309305 | Msa0123310:CDS | 50.0% | |
| CTGGATATGGTGGTCTAAGG+AGG | + | chr1_3:50309289-50309308 | Msa0123310:CDS | 50.0% | |
| !!! | AGTCATTTTGGAACGGGGCT+AGG | - | chr1_3:50309535-50309554 | None:intergenic | 50.0% |
| CCCCGTTCCAAAATGACTCA+TGG | + | chr1_3:50309537-50309556 | Msa0123310:intron | 50.0% | |
| GTTGCCGGAAAATCCGATCA+GGG | + | chr1_3:50308049-50308068 | Msa0123310:CDS | 50.0% | |
| GGAAAATCCGATCAGGGAAG+AGG | + | chr1_3:50308055-50308074 | Msa0123310:CDS | 50.0% | |
| CACCAAGTCCTGCAGAGATT+AGG | + | chr1_3:50308261-50308280 | Msa0123310:CDS | 50.0% | |
| AGCCTAATCTCTGCAGGACT+TGG | - | chr1_3:50308266-50308285 | None:intergenic | 50.0% | |
| CTCTTGAGCCTAATCTCTGC+AGG | - | chr1_3:50308272-50308291 | None:intergenic | 50.0% | |
| GCTCAACTCCGTCAGCAAAA+AGG | + | chr1_3:50308847-50308866 | Msa0123310:CDS | 50.0% | |
| ! | TGACCCTTTGTGGTCTTGCA+AGG | - | chr1_3:50309140-50309159 | None:intergenic | 50.0% |
| GGGTCACACCAATTCTTCTC+AGG | + | chr1_3:50309154-50309173 | Msa0123310:CDS | 50.0% | |
| ATCCAGCTGGAAGATGCTCT+GGG | - | chr1_3:50309275-50309294 | None:intergenic | 50.0% | |
| TATCCAGCTGGAAGATGCTC+TGG | - | chr1_3:50309276-50309295 | None:intergenic | 50.0% | |
| GAGCATCTTCCAGCTGGATA+TGG | + | chr1_3:50309276-50309295 | Msa0123310:CDS | 50.0% | |
| CATCTTCCAGCTGGATATGG+TGG | + | chr1_3:50309279-50309298 | Msa0123310:CDS | 50.0% | |
| CTTAGACCACCATATCCAGC+TGG | - | chr1_3:50309288-50309307 | None:intergenic | 50.0% | |
| CAGCTGGATATGGTGGTCTA+AGG | + | chr1_3:50309286-50309305 | Msa0123310:CDS | 50.0% | |
| CTGGATATGGTGGTCTAAGG+AGG | + | chr1_3:50309289-50309308 | Msa0123310:CDS | 50.0% | |
| !!! | AGTCATTTTGGAACGGGGCT+AGG | - | chr1_3:50309535-50309554 | None:intergenic | 50.0% |
| CCCCGTTCCAAAATGACTCA+TGG | + | chr1_3:50309537-50309556 | Msa0123310:intron | 50.0% | |
| TGGGGAGGGATCAGGAAAGA+TGG | - | chr1_3:50307985-50308004 | None:intergenic | 55.0% | |
| ! | TGGAAGAGGGTGCAGAGGAT+GGG | - | chr1_3:50308004-50308023 | None:intergenic | 55.0% |
| ! | ATGGAAGAGGGTGCAGAGGA+TGG | - | chr1_3:50308005-50308024 | None:intergenic | 55.0% |
| CGTTGCCGGAAAATCCGATC+AGG | + | chr1_3:50308048-50308067 | Msa0123310:CDS | 55.0% | |
| CTCATGGCCTCTTCCCTGAT+CGG | - | chr1_3:50308065-50308084 | None:intergenic | 55.0% | |
| TGGGGAGGGATCAGGAAAGA+TGG | - | chr1_3:50307985-50308004 | None:intergenic | 55.0% | |
| ! | TGGAAGAGGGTGCAGAGGAT+GGG | - | chr1_3:50308004-50308023 | None:intergenic | 55.0% |
| ! | ATGGAAGAGGGTGCAGAGGA+TGG | - | chr1_3:50308005-50308024 | None:intergenic | 55.0% |
| CGTTGCCGGAAAATCCGATC+AGG | + | chr1_3:50308048-50308067 | Msa0123310:CDS | 55.0% | |
| CTCATGGCCTCTTCCCTGAT+CGG | - | chr1_3:50308065-50308084 | None:intergenic | 55.0% | |
| ! | GGAAGAGGGTGCAGAGGATG+GGG | - | chr1_3:50308003-50308022 | None:intergenic | 60.0% |
| ! | GAGCATGGAAGAGGGTGCAG+AGG | - | chr1_3:50308009-50308028 | None:intergenic | 60.0% |
| ! | GGAAGAGGGTGCAGAGGATG+GGG | - | chr1_3:50308003-50308022 | None:intergenic | 60.0% |
| ! | GAGCATGGAAGAGGGTGCAG+AGG | - | chr1_3:50308009-50308028 | None:intergenic | 60.0% |
| GCAGAGGATGGGGAGGGATC+AGG | - | chr1_3:50307993-50308012 | None:intergenic | 65.0% | |
| ! | GAGGGTGCAGAGGATGGGGA+GGG | - | chr1_3:50307999-50308018 | None:intergenic | 65.0% |
| ! | AGAGGGTGCAGAGGATGGGG+AGG | - | chr1_3:50308000-50308019 | None:intergenic | 65.0% |
| ! | GGCCCAGAGCATCTTCCAGC+TGG | + | chr1_3:50309270-50309289 | Msa0123310:CDS | 65.0% |
| GCAGAGGATGGGGAGGGATC+AGG | - | chr1_3:50307993-50308012 | None:intergenic | 65.0% | |
| ! | GAGGGTGCAGAGGATGGGGA+GGG | - | chr1_3:50307999-50308018 | None:intergenic | 65.0% |
| ! | AGAGGGTGCAGAGGATGGGG+AGG | - | chr1_3:50308000-50308019 | None:intergenic | 65.0% |
| ! | GGCCCAGAGCATCTTCCAGC+TGG | + | chr1_3:50309270-50309289 | Msa0123310:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 50307905 | 50310151 | 50307905 | ID=Msa0123310;Name=Msa0123310 |
| chr1_3 | mRNA | 50307905 | 50310151 | 50307905 | ID=Msa0123310-mRNA-1;Parent=Msa0123310;Name=Msa0123310-mRNA-1;_AED=0.10;_eAED=0.10;_QI=118|0.75|0.6|1|1|1|5|0|469 |
| chr1_3 | exon | 50307905 | 50308916 | 50307905 | ID=Msa0123310-mRNA-1:exon:15396;Parent=Msa0123310-mRNA-1 |
| chr1_3 | exon | 50309051 | 50309175 | 50309051 | ID=Msa0123310-mRNA-1:exon:15397;Parent=Msa0123310-mRNA-1 |
| chr1_3 | exon | 50309263 | 50309404 | 50309263 | ID=Msa0123310-mRNA-1:exon:15398;Parent=Msa0123310-mRNA-1 |
| chr1_3 | exon | 50309795 | 50310003 | 50309795 | ID=Msa0123310-mRNA-1:exon:15399;Parent=Msa0123310-mRNA-1 |
| chr1_3 | exon | 50310112 | 50310151 | 50310112 | ID=Msa0123310-mRNA-1:exon:15400;Parent=Msa0123310-mRNA-1 |
| chr1_3 | five_prime_UTR | 50307905 | 50308022 | 50307905 | ID=Msa0123310-mRNA-1:five_prime_utr;Parent=Msa0123310-mRNA-1 |
| chr1_3 | CDS | 50308023 | 50308916 | 50308023 | ID=Msa0123310-mRNA-1:cds;Parent=Msa0123310-mRNA-1 |
| chr1_3 | CDS | 50309051 | 50309175 | 50309051 | ID=Msa0123310-mRNA-1:cds;Parent=Msa0123310-mRNA-1 |
| chr1_3 | CDS | 50309263 | 50309404 | 50309263 | ID=Msa0123310-mRNA-1:cds;Parent=Msa0123310-mRNA-1 |
| chr1_3 | CDS | 50309795 | 50310003 | 50309795 | ID=Msa0123310-mRNA-1:cds;Parent=Msa0123310-mRNA-1 |
| chr1_3 | CDS | 50310112 | 50310151 | 50310112 | ID=Msa0123310-mRNA-1:cds;Parent=Msa0123310-mRNA-1 |
| Gene Sequence |
| Protein sequence |
