AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0434840

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0434840 MtrunA17_Chr3g0141581 87.813 599 14 2 1 540 1 599 0.0 1070
Msa0434840 MtrunA17_Chr1g0155151 70.213 517 95 2 78 535 103 619 0.0 715
Msa0434840 MtrunA17_Chr5g0437011 62.327 507 119 5 95 531 16 520 0.0 615
Msa0434840 MtrunA17_Chr4g0069341 29.032 496 255 14 103 529 135 602 1.50e-51 186
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0434840 AT1G75210.1 61.628 602 150 9 1 533 51 640 0.0 716
Msa0434840 AT1G75210.2 67.442 516 106 4 79 533 23 537 0.0 708
Msa0434840 AT1G75210.3 67.442 516 106 4 79 533 23 537 0.0 708
Msa0434840 AT5G48960.1 28.715 498 258 16 101 529 163 632 8.49e-46 171
Msa0434840 AT2G23890.1 23.466 554 300 19 31 518 35 530 1.09e-24 108
Msa0434840 AT2G23890.3 24.738 477 253 16 103 518 9 440 1.09e-24 107
Msa0434840 AT2G23890.2 22.798 579 298 21 31 518 35 555 1.14e-20 96.3

Find 177 sgRNAs with CRISPR-Local

Find 542 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTGATCTGTCATGAGTTTC+TGG 0.052462 3_2:+87866533 Msa0434840:three_prime_UTR
TTCCTTTGCGTTTGGAAAAT+TGG 0.128966 3_2:+87866508 Msa0434840:three_prime_UTR
GAAATGTAAGTTTCAGAATT+TGG 0.144043 3_2:+87866478 Msa0434840:exon
CTGTTTGCCTCTATCGGTTT+TGG 0.176761 3_2:-87861082 None:intergenic
ATCTTCAGCACTTGATAAAT+TGG 0.200476 3_2:+87865626 Msa0434840:CDS
TGATATAAGGGTTTGGAATT+AGG 0.225213 3_2:-87859089 None:intergenic
ATTATTCCTATTTCCTATAC+TGG 0.226492 3_2:-87859291 None:intergenic
AAATGTAAGTTTCAGAATTT+GGG 0.260305 3_2:+87866479 Msa0434840:exon
GTTGCTGCCACCTACCATTC+TGG 0.262923 3_2:-87863525 None:intergenic
GCAAGGGATTCAAAAGTTTC+AGG 0.270692 3_2:-87861186 None:intergenic
CCAATTCCAGTATAGGAAAT+AGG 0.278378 3_2:+87859285 Msa0434840:five_prime_UTR
CCTATTTCCTATACTGGAAT+TGG 0.279659 3_2:-87859285 None:intergenic
CTATTCCATTTGCAGTTTAT+GGG 0.283818 3_2:+87863466 Msa0434840:intron
AATGAATAATAGAGAATATT+AGG 0.284190 3_2:+87859138 Msa0434840:five_prime_UTR
ACCACGTTTCAGTTCGAATT+AGG 0.287852 3_2:+87859337 Msa0434840:five_prime_UTR
AGCCTACTTGTTTGCTCAAC+TGG 0.290849 3_2:+87861830 Msa0434840:CDS
GTATTAAACATACTGATATA+AGG 0.292079 3_2:-87859102 None:intergenic
TCTCGGATTTCCTTTGCATT+TGG 0.295885 3_2:+87859560 Msa0434840:CDS
TAACAGATTAGTGATTAAAT+AGG 0.297386 3_2:-87859455 None:intergenic
GAAAATGTGAATAGCCTCTT+AGG 0.322939 3_2:-87859494 None:intergenic
GAATTCTCGCTTTGCTCATC+AGG 0.327432 3_2:+87865982 Msa0434840:CDS
GTCAATACGCAGATCAGAAT+TGG 0.336507 3_2:-87858832 None:intergenic
ATGCTACTCAATACAGATAA+TGG 0.349676 3_2:+87864384 Msa0434840:CDS
AATAATAATCAATTCATGTT+GGG 0.350879 3_2:-87859251 None:intergenic
GGGCAGCATTCCTTTGCGTT+TGG 0.354463 3_2:+87866500 Msa0434840:three_prime_UTR
CTTTCTTTCTGGTTGTGGCT+TGG 0.368500 3_2:-87858883 None:intergenic
AGACATATTACGTAGCAAAA+AGG 0.369865 3_2:+87864913 Msa0434840:CDS
CTCTTATGCAGTTACTAAGT+TGG 0.380663 3_2:+87861464 Msa0434840:intron
ATGTGTAGGTTCTGTATGTT+GGG 0.390111 3_2:+87864876 Msa0434840:intron
GAAGATAAAGTTGGGACCTA+TGG 0.391455 3_2:+87861735 Msa0434840:CDS
TCTCAGGCACAACCTCAAAT+AGG 0.392290 3_2:-87864356 None:intergenic
TTCTGTTTGGCATTAGCATC+TGG 0.393142 3_2:-87865600 None:intergenic
AAAACTAATAAGCACCTTCC+GGG 0.394757 3_2:-87865210 None:intergenic
TTTGAGGTTGTGCCTGAGAC+TGG 0.400973 3_2:+87864360 Msa0434840:CDS
AAAAGTAAATTACTGATATA+AGG 0.403480 3_2:-87858998 None:intergenic
AACATACTGATATAAGGGTT+TGG 0.404297 3_2:-87859096 None:intergenic
TATTAAACATACTGATATAA+GGG 0.405032 3_2:-87859101 None:intergenic
TTGAAGATTGAGAATGCAAT+TGG 0.405571 3_2:-87860951 None:intergenic
TTAACTGGAAGTACATGGTC+AGG 0.408967 3_2:+87861491 Msa0434840:CDS
TGAAACGTGGTGGCATCGTT+TGG 0.409128 3_2:-87859325 None:intergenic
TTAACCTCCTTCTCCAGCTC+TGG 0.417826 3_2:-87865164 None:intergenic
ACAAAATCCAATTCCAGTAT+AGG 0.422695 3_2:+87859278 Msa0434840:five_prime_UTR
ATTGCATTCTCAATCTTCAA+TGG 0.424909 3_2:+87860954 Msa0434840:CDS
GTGGAAAACGGCCACGTGTA+TGG 0.430022 3_2:+87861037 Msa0434840:CDS
GAGAATATTAGGTGAAAAGA+TGG 0.431771 3_2:+87859149 Msa0434840:five_prime_UTR
AGAAGGAGGTTAAACTCCTC+TGG 0.432504 3_2:+87865174 Msa0434840:CDS
TGGGGACAGCTTATGAAAAC+TGG 0.433622 3_2:+87865953 Msa0434840:CDS
TATGTGTAGGTTCTGTATGT+TGG 0.437139 3_2:+87864875 Msa0434840:intron
TATAACTTCGTTACATGTGA+TGG 0.440114 3_2:+87866926 Msa0434840:three_prime_UTR
TATGTTGGGGATCACATTTA+CGG 0.441059 3_2:+87864890 Msa0434840:CDS
CAACTCTCTAAATCCGTGAT+AGG 0.441165 3_2:-87861706 None:intergenic
CTGGGTCTGTAATACTTGTC+TGG 0.441630 3_2:-87866406 None:intergenic
TGCTGAAGATAGCTTCTGTT+TGG 0.442149 3_2:-87865613 None:intergenic
TTTGAATCCCTTGCTTATCA+AGG 0.446765 3_2:+87861195 Msa0434840:CDS
ACTAAAACGAGCAAGAGAAC+GGG 0.448862 3_2:-87866564 None:intergenic
GAAGTACATGGTCAGGGGCT+TGG 0.456945 3_2:+87861498 Msa0434840:CDS
TCAAAGAAAATTACATCAAA+GGG 0.457164 3_2:+87865779 Msa0434840:CDS
TGCAACTTCACAATCACAAC+TGG 0.458008 3_2:-87859385 None:intergenic
GACTTGCCCGACGGTGATAG+TGG 0.458826 3_2:+87861018 Msa0434840:CDS
AAATATCTGTTTGCCTCTAT+CGG 0.461243 3_2:-87861088 None:intergenic
TTAAACTCCTCTGGGAATCA+AGG 0.465919 3_2:+87865183 Msa0434840:CDS
CATGGATCCAAAACCGATAG+AGG 0.467712 3_2:+87861075 Msa0434840:CDS
TACTTTGATGTGGTTATCAC+TGG 0.471184 3_2:+87863566 Msa0434840:CDS
ATGCTGCATAAAATCTTCAC+TGG 0.471547 3_2:-87866425 None:intergenic
TTGGAATTAGGAATGAATAG+AGG 0.487867 3_2:-87859077 None:intergenic
TAATAATAATCAATTCATGT+TGG 0.490180 3_2:-87859252 None:intergenic
TGTCAAAAGAAGATAAAGTT+GGG 0.490411 3_2:+87861727 Msa0434840:CDS
TTGAGTAGCATTCCAGTCTC+AGG 0.493561 3_2:-87864372 None:intergenic
CGCAGGAGCTTCAATTCTTG+AGG 0.494712 3_2:+87865433 Msa0434840:intron
GCAAGGCCAGGTTAGATACT+TGG 0.496502 3_2:-87866378 None:intergenic
CTCAAAGAAAATTACATCAA+AGG 0.496771 3_2:+87865778 Msa0434840:CDS
TTCAGCACTTGATAAATTGG+AGG 0.499716 3_2:+87865629 Msa0434840:CDS
TACCTGTGAACTTGATTCGA+TGG 0.500748 3_2:-87864785 None:intergenic
CTCTCCTGATGCAGGTTGAG+AGG 0.503063 3_2:+87866335 Msa0434840:intron
TGTTCTTCATATTCAGTGAC+CGG 0.503871 3_2:-87861116 None:intergenic
AACATACCCGTGCTGACGCA+CGG 0.510877 3_2:+87866794 Msa0434840:three_prime_UTR
TAATGGCTCTCCTATGCCTC+AGG 0.511207 3_2:+87864401 Msa0434840:CDS
ATGATTGTACCTGGAAAACT+TGG 0.514538 3_2:-87864556 None:intergenic
TTGTCAAAAGAAGATAAAGT+TGG 0.516809 3_2:+87861726 Msa0434840:CDS
TTCCATCGAATCAAGTTCAC+AGG 0.518106 3_2:+87864783 Msa0434840:CDS
AAATCGTGCCAACCTATTTG+AGG 0.521019 3_2:+87864344 Msa0434840:CDS
GTATCAATTAGAGCATAGTC+TGG 0.526169 3_2:-87861789 None:intergenic
CTGTGAAATGAAATTTGTGA+TGG 0.526577 3_2:-87858957 None:intergenic
CGAACCTGGTGATGCGATGT+TGG 0.526738 3_2:-87859612 None:intergenic
CTGATAAGACAAACCTCGCT+AGG 0.529756 3_2:-87861252 None:intergenic
ATCGCAGTTTCACGAACCAT+GGG 0.531426 3_2:+87865934 Msa0434840:intron
AAAACGAGGAAATATCTTGA+AGG 0.533402 3_2:+87861531 Msa0434840:CDS
TATCGCAGTTTCACGAACCA+TGG 0.535810 3_2:+87865933 Msa0434840:intron
GCACGATGCGAATTCCTAAG+AGG 0.537707 3_2:+87859480 Msa0434840:exon
TTGATGTGGTTATCACTGGC+AGG 0.539529 3_2:+87863570 Msa0434840:CDS
AATGCTTGTAATTCCAGAGC+TGG 0.539960 3_2:+87865151 Msa0434840:CDS
GGCATCGTTTGGAACAAAAG+AGG 0.543066 3_2:-87859314 None:intergenic
TACTAAAACGAGCAAGAGAA+CGG 0.543850 3_2:-87866565 None:intergenic
CTCTGTGGATCCAGAATGGT+AGG 0.544205 3_2:+87863515 Msa0434840:CDS
TTCGCCAACATCGCATCACC+AGG 0.546210 3_2:+87859608 Msa0434840:CDS
TACTTGGCTAGTATAAAGAC+AGG 0.550721 3_2:-87866362 None:intergenic
AGCGGAAATTCCAAATGCAA+AGG 0.552652 3_2:-87859570 None:intergenic
AATTCTAGCTTCTGAGCCAC+GGG 0.553370 3_2:+87866456 Msa0434840:CDS
ATTGCAATGCGAGAGGTTGT+TGG 0.556098 3_2:-87859032 None:intergenic
AATTGTGCCTTGATAAGCAA+GGG 0.558308 3_2:-87861202 None:intergenic
AGAGGTTGTTGGTGGAAATG+TGG 0.558504 3_2:-87859021 None:intergenic
TGGTCGTCTTCTCCTGAACA+TGG 0.560021 3_2:+87861057 Msa0434840:CDS
AGAATATTAGGTGAAAAGAT+GGG 0.560857 3_2:+87859150 Msa0434840:five_prime_UTR
TAACTGGAAGTACATGGTCA+GGG 0.561461 3_2:+87861492 Msa0434840:CDS
GAAGGAGGTTAAACTCCTCT+GGG 0.565134 3_2:+87865175 Msa0434840:CDS
TAATCAATTCATGTTGGGGA+AGG 0.568132 3_2:-87859246 None:intergenic
AAAAGAGGTGATACGAGTTG+AGG 0.568885 3_2:-87859533 None:intergenic
ATACTTGTCTGGAGAGTGCA+AGG 0.569406 3_2:-87866395 None:intergenic
GAATTCTAGCTTCTGAGCCA+CGG 0.570039 3_2:+87866455 Msa0434840:CDS
TGTTGCTGTGGGATTTGACA+TGG 0.575271 3_2:+87861140 Msa0434840:CDS
ATAATAATCAATTCATGTTG+GGG 0.575462 3_2:-87859250 None:intergenic
ATTGTGCAAACCTGAGGCAT+AGG 0.576389 3_2:-87864411 None:intergenic
CCGACGGTGATAGTGGAAAA+CGG 0.578107 3_2:+87861025 Msa0434840:CDS
TCTGGGAATCAAGGGACACC+CGG 0.578846 3_2:+87865192 Msa0434840:CDS
CTGTACCCGTGCGTCAGCAC+GGG 0.578894 3_2:-87866800 None:intergenic
ATTTGACATGGACTATACTC+TGG 0.580030 3_2:+87861152 Msa0434840:CDS
CTATCCTACAGTGCAAAGCC+AGG 0.580299 3_2:+87864306 Msa0434840:intron
ATAACTTCGTTACATGTGAT+GGG 0.581348 3_2:+87866927 Msa0434840:three_prime_UTR
GAAATCCGAGAAGATAAAAG+AGG 0.581677 3_2:-87859548 None:intergenic
TTTCCTCTGTGGATCCAGAA+TGG 0.586709 3_2:+87863511 Msa0434840:CDS
TGTCTGGAGAGTGCAAGGCC+AGG 0.587075 3_2:-87866390 None:intergenic
ATATAAGGTGTGTGTGATGG+TGG 0.592660 3_2:-87858983 None:intergenic
TAAACTCCTCTGGGAATCAA+GGG 0.593087 3_2:+87865184 Msa0434840:CDS
TGGCTTGGATAAGTAGTGCC+CGG 0.594985 3_2:-87858868 None:intergenic
AACTGGAAGTACATGGTCAG+GGG 0.598866 3_2:+87861493 Msa0434840:CDS
ATGAAGTACATCATTTGAAG+TGG 0.599731 3_2:+87865478 Msa0434840:CDS
ATGAAGAACATTGTTGCTGT+GGG 0.601622 3_2:+87861129 Msa0434840:CDS
AGGCTACTTTCACATACTTG+TGG 0.603729 3_2:-87861686 None:intergenic
AGGCACAACCTCAAATAGGT+TGG 0.605251 3_2:-87864352 None:intergenic
ACATACCCGTGCTGACGCAC+GGG 0.608558 3_2:+87866795 Msa0434840:three_prime_UTR
TGTAATTCCAGAGCTGGAGA+AGG 0.608827 3_2:+87865157 Msa0434840:CDS
AATTCCAGAGCTGGAGAAGG+AGG 0.609094 3_2:+87865160 Msa0434840:CDS
GTGCTCAACGAGCAGGATGG+AGG 0.609977 3_2:+87865126 Msa0434840:intron
TTTACAAATTGCAATGCGAG+AGG 0.610539 3_2:-87859039 None:intergenic
AGTTTCGTCCACAACTAACG+TGG 0.613556 3_2:+87866661 Msa0434840:three_prime_UTR
TGGTGATGCGATGTTGGCGA+AGG 0.613850 3_2:-87859606 None:intergenic
TATGAAGAACATTGTTGCTG+TGG 0.616022 3_2:+87861128 Msa0434840:CDS
GCCTAATTCGAACTGAAACG+TGG 0.616845 3_2:-87859338 None:intergenic
TGCTGCATAAAATCTTCACT+GGG 0.617509 3_2:-87866424 None:intergenic
AATCCTGAAAAGATTCGAGA+AGG 0.617708 3_2:+87861870 Msa0434840:CDS
CTAAAACGAGCAAGAGAACG+GGG 0.618327 3_2:-87866563 None:intergenic
TAATTGTGCCTTGATAAGCA+AGG 0.618555 3_2:-87861203 None:intergenic
GCGTACTAAAGTATTTCCAT+AGG 0.618622 3_2:-87861751 None:intergenic
GAAGGGACGAGAAGATTTAG+CGG 0.620821 3_2:-87859588 None:intergenic
ATTTGTGATGGTGTGGCGCG+TGG 0.623309 3_2:-87858945 None:intergenic
TACTAGCCAAGTATCTAACC+TGG 0.623470 3_2:+87866372 Msa0434840:CDS
CTGATATAAGGTGTGTGTGA+TGG 0.628056 3_2:-87858986 None:intergenic
ACTGTACCCGTGCGTCAGCA+CGG 0.629729 3_2:-87866801 None:intergenic
GGAATCAAGGGACACCCGGA+AGG 0.630788 3_2:+87865196 Msa0434840:CDS
GCAATGCGAGAGGTTGTTGG+TGG 0.631946 3_2:-87859029 None:intergenic
TCTGAAACTTACATTTCCCG+TGG 0.633107 3_2:-87866472 None:intergenic
TATGTGAAAGTAGCCTATCA+CGG 0.638434 3_2:+87861693 Msa0434840:CDS
CGATTTAGGATATCCTAGCG+AGG 0.642081 3_2:+87861239 Msa0434840:CDS
GTTTCGTCCACAACTAACGT+GGG 0.642877 3_2:+87866662 Msa0434840:three_prime_UTR
AAATGAAATTTGTGATGGTG+TGG 0.649127 3_2:-87858952 None:intergenic
TATACATGACTCAAGATCAG+TGG 0.663844 3_2:+87860996 Msa0434840:CDS
TTTCGTCCACAACTAACGTG+GGG 0.665132 3_2:+87866663 Msa0434840:three_prime_UTR
ATGGCTTCAATACTTTGATG+TGG 0.665897 3_2:+87863556 Msa0434840:CDS
TCAATGGATGAGAATCATGA+TGG 0.666948 3_2:+87860970 Msa0434840:CDS
GGTGATGCGATGTTGGCGAA+GGG 0.668197 3_2:-87859605 None:intergenic
TGTGTAGGTTCTGTATGTTG+GGG 0.670087 3_2:+87864877 Msa0434840:intron
AATGTAAGTTTCAGAATTTG+GGG 0.670788 3_2:+87866480 Msa0434840:exon
ATTAGGAATGAATAGAGGTG+AGG 0.675568 3_2:-87859072 None:intergenic
AGATCAGTGGACTTGCCCGA+CGG 0.675755 3_2:+87861009 Msa0434840:CDS
ACTGTCATGAATTTCCTCTG+TGG 0.683068 3_2:+87863500 Msa0434840:CDS
GGGTGTCCCTTGATTCCCAG+AGG 0.683911 3_2:-87865190 None:intergenic
AACCAGTTGAGCAAACAAGT+AGG 0.686251 3_2:-87861832 None:intergenic
AGGTGGGGAACATCTCAGCA+AGG 0.688437 3_2:+87864504 Msa0434840:intron
TGTGGATCCAGAATGGTAGG+TGG 0.694914 3_2:+87863518 Msa0434840:CDS
TTCGTCCACAACTAACGTGG+GGG 0.704079 3_2:+87866664 Msa0434840:three_prime_UTR
GGAGAAGACGACCATACACG+TGG 0.707489 3_2:-87861048 None:intergenic
TAATTCGAACTGAAACGTGG+TGG 0.712600 3_2:-87859335 None:intergenic
TCGCAGTTTCACGAACCATG+GGG 0.721054 3_2:+87865935 Msa0434840:intron
ATGGATGAGAATCATGATGG+TGG 0.738478 3_2:+87860973 Msa0434840:CDS
GAGTGAGCGTGATCGCATCG+AGG 0.744333 3_2:+87865455 Msa0434840:CDS
CTACCATTCTGGATCCACAG+AGG 0.764767 3_2:-87863514 None:intergenic
TAAAACGAGCAAGAGAACGG+GGG 0.777005 3_2:-87866562 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATAAAAAAAAAAGAG+GGG + chr3_2:87859215-87859234 Msa0434840:five_prime_UTR 10.0%
!!! TAAGAGTAATTAAATTTTTA+AGG + chr3_2:87860481-87860500 Msa0434840:intron 10.0%
!!! AAAATTTAATTGTGAAATTT+TGG + chr3_2:87864059-87864078 Msa0434840:intron 10.0%
!!! AAATTTAATTGTGAAATTTT+GGG + chr3_2:87864060-87864079 Msa0434840:intron 10.0%
!!! TGTAAAATGAAAATAATTTT+AGG + chr3_2:87864586-87864605 Msa0434840:intron 10.0%
!! AAAAGTAAATTACTGATATA+AGG - chr3_2:87859001-87859020 None:intergenic 15.0%
!! TATTAAACATACTGATATAA+GGG - chr3_2:87859104-87859123 None:intergenic 15.0%
!! AATGAATAATAGAGAATATT+AGG + chr3_2:87859138-87859157 Msa0434840:five_prime_UTR 15.0%
!! AATAATAATCAATTCATGTT+GGG - chr3_2:87859254-87859273 None:intergenic 15.0%
!! TAATAATAATCAATTCATGT+TGG - chr3_2:87859255-87859274 None:intergenic 15.0%
!!! AGTAATTAAATTTTTAAGGT+TGG + chr3_2:87860485-87860504 Msa0434840:intron 15.0%
!!! TTCTTTTTTTTTTCTTTTGA+AGG + chr3_2:87861990-87862009 Msa0434840:intron 15.0%
!!! TCTTTTTTTTTTCTTTTGAA+GGG + chr3_2:87861991-87862010 Msa0434840:intron 15.0%
!!! ATAGCTCTATAATAAATATT+AGG + chr3_2:87862247-87862266 Msa0434840:intron 15.0%
!! AAAGAAAAAATTATGACATT+GGG - chr3_2:87862696-87862715 None:intergenic 15.0%
!! AAAATTTAAACAAAAATCTG+AGG - chr3_2:87862783-87862802 None:intergenic 15.0%
!!! TTGTTTAAATTTTATCTATC+AGG + chr3_2:87862790-87862809 Msa0434840:intron 15.0%
!!! TCAACATCATTTAATTTTTT+TGG + chr3_2:87862907-87862926 Msa0434840:intron 15.0%
!!! AAAAAAGAAACAATTTTTGT+AGG - chr3_2:87863078-87863097 None:intergenic 15.0%
!!! TGAAAAGTATTTAAATTTGT+AGG + chr3_2:87863345-87863364 Msa0434840:intron 15.0%
!!! GAAAAGTATTTAAATTTGTA+GGG + chr3_2:87863346-87863365 Msa0434840:intron 15.0%
!! ATTACATTACAAACAATAAA+TGG + chr3_2:87863704-87863723 Msa0434840:intron 15.0%
!! TTACATTACAAACAATAAAT+GGG + chr3_2:87863705-87863724 Msa0434840:intron 15.0%
!! AAAAGAGTCATATATATTTA+GGG - chr3_2:87863876-87863895 None:intergenic 15.0%
!! AAAAAGAGTCATATATATTT+AGG - chr3_2:87863877-87863896 None:intergenic 15.0%
!!! TTTTTTTTAATATTGAAAGG+TGG + chr3_2:87864487-87864506 Msa0434840:intron 15.0%
!!! TTTTTTTAATATTGAAAGGT+GGG + chr3_2:87864488-87864507 Msa0434840:intron 15.0%
!!! AAATTATTTTCATTTTACAG+AGG - chr3_2:87864585-87864604 None:intergenic 15.0%
!!! TTTTATTTTTTATAAAGCCA+AGG - chr3_2:87865270-87865289 None:intergenic 15.0%
!! CCAAAAAAAAAAAAAAAAAC+AGG - chr3_2:87865718-87865737 None:intergenic 15.0%
!!! CCTGTTTTTTTTTTTTTTTT+TGG + chr3_2:87865715-87865734 Msa0434840:intron 15.0%
!! TTATTGAAGAAAAAAAAACA+TGG + chr3_2:87866143-87866162 Msa0434840:intron 15.0%
!! TGAATTAATTATCATTTAGT+GGG - chr3_2:87866310-87866329 None:intergenic 15.0%
!! TTGAATTAATTATCATTTAG+TGG - chr3_2:87866311-87866330 None:intergenic 15.0%
!!! AAGAGTTTGATTTTTTTTAA+TGG + chr3_2:87866841-87866860 Msa0434840:three_prime_UTR 15.0%
!! GTATTAAACATACTGATATA+AGG - chr3_2:87859105-87859124 None:intergenic 20.0%
!!! TTATTCATTTTCGTAAGAAA+CGG - chr3_2:87859127-87859146 None:intergenic 20.0%
!! ATAATAATCAATTCATGTTG+GGG - chr3_2:87859253-87859272 None:intergenic 20.0%
!! TAACAGATTAGTGATTAAAT+AGG - chr3_2:87859458-87859477 None:intergenic 20.0%
!! CAAACAAACAAATAAAGAAA+TGG - chr3_2:87859685-87859704 None:intergenic 20.0%
!!! CATTTCTTTATTTGTTTGTT+TGG + chr3_2:87859683-87859702 Msa0434840:intron 20.0%
!! ATAAGTACTTATATGATAAG+TGG + chr3_2:87859839-87859858 Msa0434840:intron 20.0%
!!! TTTTGTTTTCTAGAATTACT+TGG + chr3_2:87860180-87860199 Msa0434840:intron 20.0%
!!! TTTGTTTTCTAGAATTACTT+GGG + chr3_2:87860181-87860200 Msa0434840:intron 20.0%
!!! GCATATAAATTTTAGGAAAA+AGG - chr3_2:87860441-87860460 None:intergenic 20.0%
!! TATTAATATTCAGACCAAAA+AGG - chr3_2:87860658-87860677 None:intergenic 20.0%
!! GTTATACAAGAGTAATAATT+AGG - chr3_2:87860898-87860917 None:intergenic 20.0%
!!! ATTTTTAGCCAAAATATAAC+AGG - chr3_2:87861438-87861457 None:intergenic 20.0%
!! TATATTAGAATATTACCTTC+CGG + chr3_2:87862061-87862080 Msa0434840:intron 20.0%
!! CAAAGAAAAAATTATGACAT+TGG - chr3_2:87862697-87862716 None:intergenic 20.0%
!!! TCTTTTCATTAAACTTTGTA+TGG + chr3_2:87862969-87862988 Msa0434840:intron 20.0%
!!! CTTTTCATTAAACTTTGTAT+GGG + chr3_2:87862970-87862989 Msa0434840:intron 20.0%
!!! ATTAAGTTTTGCTTATATAC+TGG + chr3_2:87863051-87863070 Msa0434840:intron 20.0%
!!! ACATATCTGATCTTTTAAAA+AGG - chr3_2:87863236-87863255 None:intergenic 20.0%
!! TTTAAGAGAGAATATTGTAA+TGG + chr3_2:87863375-87863394 Msa0434840:intron 20.0%
!! TTAAGAGAGAATATTGTAAT+GGG + chr3_2:87863376-87863395 Msa0434840:intron 20.0%
!! CAAAGAAAACAAATATAACT+GGG - chr3_2:87863621-87863640 None:intergenic 20.0%
!!! AACTCAATTAATTTTACACA+TGG + chr3_2:87863969-87863988 Msa0434840:intron 20.0%
!! AATCTTTATACGAGATATAA+AGG - chr3_2:87864457-87864476 None:intergenic 20.0%
!!! TTTTTTAATATTGAAAGGTG+GGG + chr3_2:87864489-87864508 Msa0434840:intron 20.0%
!! ATAGGTTAATCAAAATTTAC+TGG - chr3_2:87865008-87865027 None:intergenic 20.0%
!!! AGTAAATTTTGATTAACCTA+TGG + chr3_2:87865007-87865026 Msa0434840:intron 20.0%
!!! AAAAAAATAGTTCTAATTCG+AGG - chr3_2:87865240-87865259 None:intergenic 20.0%
!! AATTAGAAAAAACAAATGAC+TGG + chr3_2:87865288-87865307 Msa0434840:intron 20.0%
!! TAATAATGCAACAGATAATA+AGG - chr3_2:87865547-87865566 None:intergenic 20.0%
!! CAATTTCATATATTTGACAA+GGG + chr3_2:87865692-87865711 Msa0434840:intron 20.0%
!! TCAAAGAAAATTACATCAAA+GGG + chr3_2:87865779-87865798 Msa0434840:CDS 20.0%
!! AGAACTAAAGAAAATGAAAA+CGG - chr3_2:87865824-87865843 None:intergenic 20.0%
!! CATATACAGTTACAATATAT+CGG + chr3_2:87865856-87865875 Msa0434840:intron 20.0%
!! CATAGAATCAAACAAAAAAA+AGG + chr3_2:87866169-87866188 Msa0434840:intron 20.0%
!! TCAAATTGATATTATGACTT+GGG - chr3_2:87866286-87866305 None:intergenic 20.0%
!! GAATTAATTATCATTTAGTG+GGG - chr3_2:87866309-87866328 None:intergenic 20.0%
!! AAATGTAAGTTTCAGAATTT+GGG + chr3_2:87866479-87866498 Msa0434840:exon 20.0%
!! TTGTAGCAAAAAATATCATA+TGG - chr3_2:87866601-87866620 None:intergenic 20.0%
!!! ATATGATATTTTTTGCTACA+AGG + chr3_2:87866600-87866619 Msa0434840:three_prime_UTR 20.0%
!!! TATGATATTTTTTGCTACAA+GGG + chr3_2:87866601-87866620 Msa0434840:three_prime_UTR 20.0%
! AGAATATTAGGTGAAAAGAT+GGG + chr3_2:87859150-87859169 Msa0434840:five_prime_UTR 25.0%
! ATTATTCCTATTTCCTATAC+TGG - chr3_2:87859294-87859313 None:intergenic 25.0%
! AACTATAAACAGTCAAACTT+AGG - chr3_2:87859751-87859770 None:intergenic 25.0%
!! TAAGGCATCATTTGTATAAA+TGG - chr3_2:87859889-87859908 None:intergenic 25.0%
! TTATACAAATGATGCCTTAT+AGG + chr3_2:87859890-87859909 Msa0434840:intron 25.0%
!!! TAGCTGCTTTTTTTTTTTGT+CGG + chr3_2:87859984-87860003 Msa0434840:intron 25.0%
!!! TTTTTTTTTTTGTCGGTTGA+CGG + chr3_2:87859991-87860010 Msa0434840:intron 25.0%
!!! TTGTTTTCTAGAATTACTTG+GGG + chr3_2:87860182-87860201 Msa0434840:intron 25.0%
!!! TGGGAAATTTTTGAAATACT+AGG + chr3_2:87860259-87860278 Msa0434840:intron 25.0%
! TTCCTAAAATTTATATGCTG+TGG + chr3_2:87860443-87860462 Msa0434840:intron 25.0%
!! ATCCACAGCATATAAATTTT+AGG - chr3_2:87860448-87860467 None:intergenic 25.0%
! AGATTACTATATGTTGTGAA+TGG + chr3_2:87860685-87860704 Msa0434840:intron 25.0%
!!! AAGTTCCACTAATTTTGAAA+TGG - chr3_2:87860797-87860816 None:intergenic 25.0%
! TCATAATTACTGCAAGAAAA+AGG - chr3_2:87861304-87861323 None:intergenic 25.0%
! TTTCTTGCAGTAATTATGAT+AGG + chr3_2:87861305-87861324 Msa0434840:intron 25.0%
! TTCTTGCAGTAATTATGATA+GGG + chr3_2:87861306-87861325 Msa0434840:intron 25.0%
!! TCTTACATCCTGTTATATTT+TGG + chr3_2:87861427-87861446 Msa0434840:intron 25.0%
! GAAATGGAAAGAAAACAATT+AGG - chr3_2:87861566-87861585 None:intergenic 25.0%
! TTGTCAAAAGAAGATAAAGT+TGG + chr3_2:87861726-87861745 Msa0434840:CDS 25.0%
! TGTCAAAAGAAGATAAAGTT+GGG + chr3_2:87861727-87861746 Msa0434840:CDS 25.0%
! TATTACAACTAAATGATTCC+AGG + chr3_2:87861944-87861963 Msa0434840:intron 25.0%
! ATATTAGAATATTACCTTCC+GGG + chr3_2:87862062-87862081 Msa0434840:intron 25.0%
! TTTCATTTACAACTGACAAT+GGG - chr3_2:87862303-87862322 None:intergenic 25.0%
!! TTTTCATTTACAACTGACAA+TGG - chr3_2:87862304-87862323 None:intergenic 25.0%
! TTGTCAGTTGTAAATGAAAA+AGG + chr3_2:87862304-87862323 Msa0434840:intron 25.0%
! TTTCATAGAAATGATCAAAC+AGG + chr3_2:87862345-87862364 Msa0434840:intron 25.0%
! AATAATTATCATGCAAGCAA+CGG + chr3_2:87862660-87862679 Msa0434840:intron 25.0%
!!! CAACATTTTTAGTGACAAAT+AGG + chr3_2:87862874-87862893 Msa0434840:intron 25.0%
!!! ATTTTTAGTGACAAATAGGT+AGG + chr3_2:87862878-87862897 Msa0434840:intron 25.0%
! ATTCTCAAAATACCCTTTAA+TGG - chr3_2:87863004-87863023 None:intergenic 25.0%
!! AGCACAAGAATAAAAGTTTT+CGG + chr3_2:87863129-87863148 Msa0434840:intron 25.0%
!! AATAAAAGTTTTCGGTAAGT+AGG + chr3_2:87863137-87863156 Msa0434840:intron 25.0%
! TTATCTCAAAAAGAATTAGC+TGG + chr3_2:87863399-87863418 Msa0434840:intron 25.0%
! CCAAAGAAAACAAATATAAC+TGG - chr3_2:87863622-87863641 None:intergenic 25.0%
!!! CCAGTTATATTTGTTTTCTT+TGG + chr3_2:87863619-87863638 Msa0434840:intron 25.0%
!! TAATGTAATTTGTGCATCAT+AGG - chr3_2:87863693-87863712 None:intergenic 25.0%
! AGTAAGATAGTGAAATTATG+AGG + chr3_2:87864034-87864053 Msa0434840:intron 25.0%
! ATTAAGAAAAGTGGTTGATT+TGG - chr3_2:87864133-87864152 None:intergenic 25.0%
!! TTTTCTTAATATCCGTGAAT+TGG + chr3_2:87864143-87864162 Msa0434840:intron 25.0%
!! TTGAAGGAGTCTTATATTAA+AGG + chr3_2:87864166-87864185 Msa0434840:intron 25.0%
!! TGAAGGAGTCTTATATTAAA+GGG + chr3_2:87864167-87864186 Msa0434840:intron 25.0%
! AATCCACAACTAAAACATTA+TGG - chr3_2:87864259-87864278 None:intergenic 25.0%
!!! TAATGTTTTAGTTGTGGATT+TGG + chr3_2:87864259-87864278 Msa0434840:intron 25.0%
!!! TTGTTGATTAAGAGTACTAA+AGG + chr3_2:87864809-87864828 Msa0434840:intron 25.0%
!! ACACATATGCTAAATTTTGA+AGG - chr3_2:87865066-87865085 None:intergenic 25.0%
! TTCAAAATTTAGCATATGTG+TGG + chr3_2:87865065-87865084 Msa0434840:intron 25.0%
!!! AAACAAATGACTGGTTTATT+CGG + chr3_2:87865297-87865316 Msa0434840:intron 25.0%
!!! CTTCTGATATTTTGTTGATT+AGG + chr3_2:87865321-87865340 Msa0434840:intron 25.0%
! CTCTTAAGTTAGTATAACTT+TGG + chr3_2:87865502-87865521 Msa0434840:intron 25.0%
! CCTTGTCAAATATATGAAAT+TGG - chr3_2:87865694-87865713 None:intergenic 25.0%
! CCAATTTCATATATTTGACA+AGG + chr3_2:87865691-87865710 Msa0434840:intron 25.0%
! CTCAAAGAAAATTACATCAA+AGG + chr3_2:87865778-87865797 Msa0434840:CDS 25.0%
! CTTTCGAATTATTATTAGAG+CGG + chr3_2:87866090-87866109 Msa0434840:intron 25.0%
! GTCAAATTGATATTATGACT+TGG - chr3_2:87866287-87866306 None:intergenic 25.0%
! GAAATGTAAGTTTCAGAATT+TGG + chr3_2:87866478-87866497 Msa0434840:exon 25.0%
! AATGTAAGTTTCAGAATTTG+GGG + chr3_2:87866480-87866499 Msa0434840:exon 25.0%
!!! ATGATATTTTTTGCTACAAG+GGG + chr3_2:87866602-87866621 Msa0434840:three_prime_UTR 25.0%
ATTGACCAAAAAATTGTAGC+CGG + chr3_2:87858849-87858868 Msa0434840:five_prime_UTR 30.0%
! AAATGAAATTTGTGATGGTG+TGG - chr3_2:87858955-87858974 None:intergenic 30.0%
CTGTGAAATGAAATTTGTGA+TGG - chr3_2:87858960-87858979 None:intergenic 30.0%
TTGGAATTAGGAATGAATAG+AGG - chr3_2:87859080-87859099 None:intergenic 30.0%
! TGATATAAGGGTTTGGAATT+AGG - chr3_2:87859092-87859111 None:intergenic 30.0%
AACATACTGATATAAGGGTT+TGG - chr3_2:87859099-87859118 None:intergenic 30.0%
GAGAATATTAGGTGAAAAGA+TGG + chr3_2:87859149-87859168 Msa0434840:five_prime_UTR 30.0%
ACAAAATCCAATTCCAGTAT+AGG + chr3_2:87859278-87859297 Msa0434840:five_prime_UTR 30.0%
! TATCACCTCTTTTATCTTCT+CGG + chr3_2:87859543-87859562 Msa0434840:CDS 30.0%
AGAACATAAAAGCTCCTATA+AGG - chr3_2:87859907-87859926 None:intergenic 30.0%
TTATGTGTAAGCGTTTATAG+AGG - chr3_2:87860021-87860040 None:intergenic 30.0%
ATAAACGCTTACACATAAAG+TGG + chr3_2:87860023-87860042 Msa0434840:intron 30.0%
TTGAAATACTAGGAACTTAG+AGG + chr3_2:87860269-87860288 Msa0434840:intron 30.0%
TTATAATTCTTTCACAACCG+AGG + chr3_2:87860326-87860345 Msa0434840:intron 30.0%
AACTAGAATGAAAAAGAGAG+AGG - chr3_2:87860394-87860413 None:intergenic 30.0%
! GCATTCCTTTATCAAGATTT+TGG + chr3_2:87860736-87860755 Msa0434840:intron 30.0%
TGAGTCCAAAATCTTGATAA+AGG - chr3_2:87860744-87860763 None:intergenic 30.0%
CTCCTGATAGATTTAATCAA+CGG - chr3_2:87860927-87860946 None:intergenic 30.0%
TTGAAGATTGAGAATGCAAT+TGG - chr3_2:87860954-87860973 None:intergenic 30.0%
ATTGCATTCTCAATCTTCAA+TGG + chr3_2:87860954-87860973 Msa0434840:CDS 30.0%
AAATATCTGTTTGCCTCTAT+CGG - chr3_2:87861091-87861110 None:intergenic 30.0%
! GCAAACAGATATTTTGTAAC+CGG + chr3_2:87861097-87861116 Msa0434840:CDS 30.0%
! AAAAAGCTGGTTTACGATTT+AGG + chr3_2:87861225-87861244 Msa0434840:CDS 30.0%
TGCAAGAAAAAGGAAAAACA+TGG - chr3_2:87861294-87861313 None:intergenic 30.0%
TTTAACATAGTGAACCAAGA+GGG - chr3_2:87861374-87861393 None:intergenic 30.0%
!!! TACTAAGTTGGTCTTTTAAC+TGG + chr3_2:87861476-87861495 Msa0434840:CDS 30.0%
AAAACGAGGAAATATCTTGA+AGG + chr3_2:87861531-87861550 Msa0434840:CDS 30.0%
ACTGGGAAAACATAATAGAT+TGG + chr3_2:87861593-87861612 Msa0434840:intron 30.0%
GGAAAACATAATAGATTGGA+TGG + chr3_2:87861597-87861616 Msa0434840:intron 30.0%
!!! TGATACACTTTTTTCTCTTG+CGG + chr3_2:87861806-87861825 Msa0434840:CDS 30.0%
!!! TTTTTTTTCTTTTGAAGGGC+TGG + chr3_2:87861995-87862014 Msa0434840:intron 30.0%
TAGAACACTGTCATAAATGT+TGG + chr3_2:87862114-87862133 Msa0434840:intron 30.0%
AGTTGTAAATGAAAAAGGAC+TGG + chr3_2:87862309-87862328 Msa0434840:intron 30.0%
TGATTATATTCATACCTTCC+TGG - chr3_2:87862613-87862632 None:intergenic 30.0%
ATAATTATCATGCAAGCAAC+GGG + chr3_2:87862661-87862680 Msa0434840:intron 30.0%
AAATACCCTTTAATGGAACA+AGG - chr3_2:87862997-87863016 None:intergenic 30.0%
CTATTCCATTTGCAGTTTAT+GGG + chr3_2:87863466-87863485 Msa0434840:intron 30.0%
AGAAGGGTAAAATTCACATT+GGG - chr3_2:87863658-87863677 None:intergenic 30.0%
GAGTCATATATATTTAGGGA+TGG - chr3_2:87863872-87863891 None:intergenic 30.0%
TTCACGGATATTAAGAAAAG+TGG - chr3_2:87864142-87864161 None:intergenic 30.0%
TTATCTTGAGCATTAACTGT+TGG + chr3_2:87864218-87864237 Msa0434840:intron 30.0%
TATCTTGAGCATTAACTGTT+GGG + chr3_2:87864219-87864238 Msa0434840:intron 30.0%
!!! ATGCCATAATGTTTTAGTTG+TGG + chr3_2:87864253-87864272 Msa0434840:intron 30.0%
ATGCTACTCAATACAGATAA+TGG + chr3_2:87864384-87864403 Msa0434840:CDS 30.0%
TGAGATCTTGACAAAATGAA+AGG - chr3_2:87864697-87864716 None:intergenic 30.0%
AGACATATTACGTAGCAAAA+AGG + chr3_2:87864913-87864932 Msa0434840:CDS 30.0%
! TTTGAGTTTCTACTCATCAA+AGG - chr3_2:87865035-87865054 None:intergenic 30.0%
TAAAACTAATAAGCACCTTC+CGG - chr3_2:87865214-87865233 None:intergenic 30.0%
!!! CTATTTTTTTTGTCAAGCCT+TGG + chr3_2:87865250-87865269 Msa0434840:intron 30.0%
!! AACAAATGACTGGTTTATTC+GGG + chr3_2:87865298-87865317 Msa0434840:intron 30.0%
ATGAAGTACATCATTTGAAG+TGG + chr3_2:87865478-87865497 Msa0434840:CDS 30.0%
AATGCAACAGATAATAAGGA+AGG - chr3_2:87865543-87865562 None:intergenic 30.0%
ATCTTCAGCACTTGATAAAT+TGG + chr3_2:87865626-87865645 Msa0434840:CDS 30.0%
ATATATGAAATTGGACTTCC+AGG - chr3_2:87865685-87865704 None:intergenic 30.0%
! ATTTTCTTTGAGCTTCTTGA+TGG - chr3_2:87865770-87865789 None:intergenic 30.0%
TACAGTTACAATATATCGGA+CGG + chr3_2:87865860-87865879 Msa0434840:intron 30.0%
AGTGCTAAAATAAGATGTGT+AGG - chr3_2:87866213-87866232 None:intergenic 30.0%
AAGAAAAGCTGGCATATATA+AGG - chr3_2:87866256-87866275 None:intergenic 30.0%
! GATTTTATGCAGCATGAATT+TGG + chr3_2:87866433-87866452 Msa0434840:CDS 30.0%
TATAACTTCGTTACATGTGA+TGG + chr3_2:87866926-87866945 Msa0434840:three_prime_UTR 30.0%
ATAACTTCGTTACATGTGAT+GGG + chr3_2:87866927-87866946 Msa0434840:three_prime_UTR 30.0%
TTGACCAAAAAATTGTAGCC+GGG + chr3_2:87858850-87858869 Msa0434840:five_prime_UTR 35.0%
!!! GTTTTCTTTCTTTCTGGTTG+TGG - chr3_2:87858891-87858910 None:intergenic 35.0%
!!! TGTGCTGTTTTCTTTCTTTC+TGG - chr3_2:87858897-87858916 None:intergenic 35.0%
TTTACAAATTGCAATGCGAG+AGG - chr3_2:87859042-87859061 None:intergenic 35.0%
ATTAGGAATGAATAGAGGTG+AGG - chr3_2:87859075-87859094 None:intergenic 35.0%
TAATCAATTCATGTTGGGGA+AGG - chr3_2:87859249-87859268 None:intergenic 35.0%
CCTATTTCCTATACTGGAAT+TGG - chr3_2:87859288-87859307 None:intergenic 35.0%
CCAATTCCAGTATAGGAAAT+AGG + chr3_2:87859285-87859304 Msa0434840:five_prime_UTR 35.0%
GAAAATGTGAATAGCCTCTT+AGG - chr3_2:87859497-87859516 None:intergenic 35.0%
GAAATCCGAGAAGATAAAAG+AGG - chr3_2:87859551-87859570 None:intergenic 35.0%
TTAGAGCACAAGAAATCATC+AGG - chr3_2:87859652-87859671 None:intergenic 35.0%
GGTATGTCTATGAACTCAAA+AGG - chr3_2:87859946-87859965 None:intergenic 35.0%
ATACCGTTGTATCAACATGT+AGG + chr3_2:87859961-87859980 Msa0434840:intron 35.0%
CTACCTACATGTTGATACAA+CGG - chr3_2:87859967-87859986 None:intergenic 35.0%
CAAAGTTCACTGCAAAGAAA+GGG + chr3_2:87860357-87860376 Msa0434840:intron 35.0%
AAAGTTCACTGCAAAGAAAG+GGG + chr3_2:87860358-87860377 Msa0434840:intron 35.0%
CAAATCTCTCATCACTTTAC+TGG + chr3_2:87860535-87860554 Msa0434840:intron 35.0%
!! GTATGAGTGTTTTTGTTTGC+AGG + chr3_2:87860588-87860607 Msa0434840:intron 35.0%
! AGTCCTAATTGTTGCCTTTT+TGG + chr3_2:87860641-87860660 Msa0434840:intron 35.0%
AGACCAAAAAGGCAACAATT+AGG - chr3_2:87860647-87860666 None:intergenic 35.0%
! TTGTATTATCCCGCCTATTT+TGG + chr3_2:87860766-87860785 Msa0434840:intron 35.0%
! TGTATTATCCCGCCTATTTT+GGG + chr3_2:87860767-87860786 Msa0434840:intron 35.0%
GGGTACCATTTCAAAATTAG+TGG + chr3_2:87860789-87860808 Msa0434840:intron 35.0%
GAGATCATTGTTACATGTTG+TGG + chr3_2:87860849-87860868 Msa0434840:intron 35.0%
! TGCCGTTGATTAAATCTATC+AGG + chr3_2:87860922-87860941 Msa0434840:intron 35.0%
TCAATGGATGAGAATCATGA+TGG + chr3_2:87860970-87860989 Msa0434840:CDS 35.0%
TATACATGACTCAAGATCAG+TGG + chr3_2:87860996-87861015 Msa0434840:CDS 35.0%
TGTTCTTCATATTCAGTGAC+CGG - chr3_2:87861119-87861138 None:intergenic 35.0%
TATGAAGAACATTGTTGCTG+TGG + chr3_2:87861128-87861147 Msa0434840:CDS 35.0%
ATGAAGAACATTGTTGCTGT+GGG + chr3_2:87861129-87861148 Msa0434840:CDS 35.0%
! ATTTGACATGGACTATACTC+TGG + chr3_2:87861152-87861171 Msa0434840:CDS 35.0%
TTTGAATCCCTTGCTTATCA+AGG + chr3_2:87861195-87861214 Msa0434840:CDS 35.0%
AATTGTGCCTTGATAAGCAA+GGG - chr3_2:87861205-87861224 None:intergenic 35.0%
TAATTGTGCCTTGATAAGCA+AGG - chr3_2:87861206-87861225 None:intergenic 35.0%
TCAAGGCACAATTAAAAAGC+TGG + chr3_2:87861212-87861231 Msa0434840:CDS 35.0%
TGCAGTAATTATGATAGGGA+TGG + chr3_2:87861310-87861329 Msa0434840:intron 35.0%
CTTTAACATAGTGAACCAAG+AGG - chr3_2:87861375-87861394 None:intergenic 35.0%
CTCTTGGTTCACTATGTTAA+AGG + chr3_2:87861373-87861392 Msa0434840:intron 35.0%
CTCTTATGCAGTTACTAAGT+TGG + chr3_2:87861464-87861483 Msa0434840:intron 35.0%
!! GTCTTTTAACTGGAAGTACA+TGG + chr3_2:87861486-87861505 Msa0434840:CDS 35.0%
! TTGGTTCTTGACAAAAAACG+AGG + chr3_2:87861517-87861536 Msa0434840:CDS 35.0%
TTTCCATTTCTTTCAGCACT+GGG + chr3_2:87861576-87861595 Msa0434840:intron 35.0%
TGCTGCTGTATGTATTTAGA+TGG + chr3_2:87861659-87861678 Msa0434840:intron 35.0%
TATGTGAAAGTAGCCTATCA+CGG + chr3_2:87861693-87861712 Msa0434840:CDS 35.0%
! GCGTACTAAAGTATTTCCAT+AGG - chr3_2:87861754-87861773 None:intergenic 35.0%
GTATCAATTAGAGCATAGTC+TGG - chr3_2:87861792-87861811 None:intergenic 35.0%
!! TGCTCAACTGGTTGATTTTA+AGG + chr3_2:87861842-87861861 Msa0434840:CDS 35.0%
AATCCTGAAAAGATTCGAGA+AGG + chr3_2:87861870-87861889 Msa0434840:CDS 35.0%
AACTAAATGATTCCAGGACT+AGG + chr3_2:87861950-87861969 Msa0434840:intron 35.0%
TGTTGTAGCAGTTTACAATC+AGG - chr3_2:87862200-87862219 None:intergenic 35.0%
ACTGCTACAACATGAATAGT+AGG + chr3_2:87862208-87862227 Msa0434840:intron 35.0%
TAGTAGGCAGGTGAAATTAA+TGG + chr3_2:87862224-87862243 Msa0434840:intron 35.0%
CATAGAAATGATCAAACAGG+TGG + chr3_2:87862348-87862367 Msa0434840:intron 35.0%
GATAAATGATGCAACGGTAA+AGG - chr3_2:87862423-87862442 None:intergenic 35.0%
ACATGGGATAAATGATGCAA+CGG - chr3_2:87862429-87862448 None:intergenic 35.0%
GTTCACTTCTCACTTTGATA+GGG - chr3_2:87862639-87862658 None:intergenic 35.0%
TGTTCACTTCTCACTTTGAT+AGG - chr3_2:87862640-87862659 None:intergenic 35.0%
!!! CTTTTTTGCTTACATGAGAC+TGG + chr3_2:87863091-87863110 Msa0434840:intron 35.0%
GGTAAGTAGGCAAAATATCT+TGG + chr3_2:87863150-87863169 Msa0434840:intron 35.0%
AGTTAAAATACCCGTAGACA+AGG - chr3_2:87863428-87863447 None:intergenic 35.0%
!!! TGTCTACGGGTATTTTAACT+AGG + chr3_2:87863428-87863447 Msa0434840:intron 35.0%
CCATAAACTGCAAATGGAAT+AGG - chr3_2:87863468-87863487 None:intergenic 35.0%
CCTATTCCATTTGCAGTTTA+TGG + chr3_2:87863465-87863484 Msa0434840:intron 35.0%
ATAGTCCCATAAACTGCAAA+TGG - chr3_2:87863474-87863493 None:intergenic 35.0%
ATGGCTTCAATACTTTGATG+TGG + chr3_2:87863556-87863575 Msa0434840:CDS 35.0%
TACTTTGATGTGGTTATCAC+TGG + chr3_2:87863566-87863585 Msa0434840:CDS 35.0%
CAGAAGGGTAAAATTCACAT+TGG - chr3_2:87863659-87863678 None:intergenic 35.0%
! CAATGTGAATTTTACCCTTC+TGG + chr3_2:87863657-87863676 Msa0434840:intron 35.0%
GCAATTCACTGAACTTCATA+AGG - chr3_2:87863755-87863774 None:intergenic 35.0%
GGAAAAAAAAATCTCTCGTG+AGG + chr3_2:87863990-87864009 Msa0434840:intron 35.0%
AATATCCGTGAATTGGTTGA+AGG + chr3_2:87864150-87864169 Msa0434840:intron 35.0%
! TTTTCCTCGTGAAAAAAACC+TGG - chr3_2:87864327-87864346 None:intergenic 35.0%
ATGATTGTACCTGGAAAACT+TGG - chr3_2:87864559-87864578 None:intergenic 35.0%
CCTGAGCTATCAAACATTTA+CGG - chr3_2:87864661-87864680 None:intergenic 35.0%
TATGTGTAGGTTCTGTATGT+TGG + chr3_2:87864875-87864894 Msa0434840:intron 35.0%
ATGTGTAGGTTCTGTATGTT+GGG + chr3_2:87864876-87864895 Msa0434840:intron 35.0%
TATGTTGGGGATCACATTTA+CGG + chr3_2:87864890-87864909 Msa0434840:CDS 35.0%
TTACGTAGCAAAAAGGTTCT+TGG + chr3_2:87864920-87864939 Msa0434840:CDS 35.0%
CATTGCATAGTGTAGTTGTA+AGG - chr3_2:87864960-87864979 None:intergenic 35.0%
AAAACTAATAAGCACCTTCC+GGG - chr3_2:87865213-87865232 None:intergenic 35.0%
TTGTCAGGTCTTTATTGAGA+AGG - chr3_2:87865372-87865391 None:intergenic 35.0%
!! TGAATGTGAATTAGCTTGTC+AGG - chr3_2:87865387-87865406 None:intergenic 35.0%
TGACAAGCTAATTCACATTC+AGG + chr3_2:87865386-87865405 Msa0434840:intron 35.0%
TTACTTGAATATTCTCACGC+AGG + chr3_2:87865416-87865435 Msa0434840:intron 35.0%
TTCAGCACTTGATAAATTGG+AGG + chr3_2:87865629-87865648 Msa0434840:CDS 35.0%
AAATTGGAGGTTTGTCCTTT+AGG + chr3_2:87865642-87865661 Msa0434840:intron 35.0%
ACAGTTACAATATATCGGAC+GGG + chr3_2:87865861-87865880 Msa0434840:intron 35.0%
!! TTGTACACTGGTTTGGAAAT+GGG - chr3_2:87866045-87866064 None:intergenic 35.0%
TAGCACTTTCAAGAAGAAAC+TGG + chr3_2:87866226-87866245 Msa0434840:intron 35.0%
! GATATTATGACTTGGGAGTA+AGG - chr3_2:87866279-87866298 None:intergenic 35.0%
TACTTGGCTAGTATAAAGAC+AGG - chr3_2:87866365-87866384 None:intergenic 35.0%
TGCTGCATAAAATCTTCACT+GGG - chr3_2:87866427-87866446 None:intergenic 35.0%
ATGCTGCATAAAATCTTCAC+TGG - chr3_2:87866428-87866447 None:intergenic 35.0%
TTCCTTTGCGTTTGGAAAAT+TGG + chr3_2:87866508-87866527 Msa0434840:three_prime_UTR 35.0%
! ATCCAATTTTCCAAACGCAA+AGG - chr3_2:87866513-87866532 None:intergenic 35.0%
TACTAAAACGAGCAAGAGAA+CGG - chr3_2:87866568-87866587 None:intergenic 35.0%
GTCAATACGCAGATCAGAAT+TGG - chr3_2:87858835-87858854 None:intergenic 40.0%
ATATAAGGTGTGTGTGATGG+TGG - chr3_2:87858986-87859005 None:intergenic 40.0%
CTGATATAAGGTGTGTGTGA+TGG - chr3_2:87858989-87859008 None:intergenic 40.0%
TAATTCGAACTGAAACGTGG+TGG - chr3_2:87859338-87859357 None:intergenic 40.0%
ACCACGTTTCAGTTCGAATT+AGG + chr3_2:87859337-87859356 Msa0434840:five_prime_UTR 40.0%
TGCAACTTCACAATCACAAC+TGG - chr3_2:87859388-87859407 None:intergenic 40.0%
AAAAGAGGTGATACGAGTTG+AGG - chr3_2:87859536-87859555 None:intergenic 40.0%
TCTCGGATTTCCTTTGCATT+TGG + chr3_2:87859560-87859579 Msa0434840:CDS 40.0%
AGCGGAAATTCCAAATGCAA+AGG - chr3_2:87859573-87859592 None:intergenic 40.0%
TTTAGCAACGAAAACGAACC+TGG - chr3_2:87859629-87859648 None:intergenic 40.0%
! GCTTTTATGTTCTTCACCAG+TGG + chr3_2:87859914-87859933 Msa0434840:intron 40.0%
! ACTCAAAAGGACTTTTCCAC+TGG - chr3_2:87859933-87859952 None:intergenic 40.0%
ACGCTTACACATAAAGTGGA+AGG + chr3_2:87860027-87860046 Msa0434840:intron 40.0%
ACACATAAAGTGGAAGGTCT+AGG + chr3_2:87860033-87860052 Msa0434840:intron 40.0%
CACATAAAGTGGAAGGTCTA+GGG + chr3_2:87860034-87860053 Msa0434840:intron 40.0%
!! GGGGAGAAGTTTTTCAAAAC+TGG + chr3_2:87860201-87860220 Msa0434840:intron 40.0%
TCACGAATCTCACACTATGA+AGG - chr3_2:87860229-87860248 None:intergenic 40.0%
GTGAGATTCGTGATGTGAAT+TGG + chr3_2:87860236-87860255 Msa0434840:intron 40.0%
AGATTCGTGATGTGAATTGG+TGG + chr3_2:87860239-87860258 Msa0434840:intron 40.0%
GATTCGTGATGTGAATTGGT+GGG + chr3_2:87860240-87860259 Msa0434840:intron 40.0%
TGAACTTTGGCATCATACCT+CGG - chr3_2:87860346-87860365 None:intergenic 40.0%
CCTTTCTTTGCAGTGAACTT+TGG - chr3_2:87860359-87860378 None:intergenic 40.0%
CCAAAGTTCACTGCAAAGAA+AGG + chr3_2:87860356-87860375 Msa0434840:intron 40.0%
TGATCAGCACAGATTTAACG+AGG - chr3_2:87860514-87860533 None:intergenic 40.0%
AAAGGAATGCATTCACTTCC+TGG - chr3_2:87860726-87860745 None:intergenic 40.0%
! GTATTATCCCGCCTATTTTG+GGG + chr3_2:87860768-87860787 Msa0434840:intron 40.0%
!! TATTATCCCGCCTATTTTGG+GGG + chr3_2:87860769-87860788 Msa0434840:intron 40.0%
TGAAATGGTACCCCCAAAAT+AGG - chr3_2:87860782-87860801 None:intergenic 40.0%
ATGGATGAGAATCATGATGG+TGG + chr3_2:87860973-87860992 Msa0434840:CDS 40.0%
GCAAGGGATTCAAAAGTTTC+AGG - chr3_2:87861189-87861208 None:intergenic 40.0%
!! TAGTTTTACCAACTCCCTCT+TGG + chr3_2:87861357-87861376 Msa0434840:intron 40.0%
! TTAACTGGAAGTACATGGTC+AGG + chr3_2:87861491-87861510 Msa0434840:CDS 40.0%
! TAACTGGAAGTACATGGTCA+GGG + chr3_2:87861492-87861511 Msa0434840:CDS 40.0%
CTTTCCATTTCTTTCAGCAC+TGG + chr3_2:87861575-87861594 Msa0434840:intron 40.0%
! TTTCCCAGTGCTGAAAGAAA+TGG - chr3_2:87861582-87861601 None:intergenic 40.0%
! AGGCTACTTTCACATACTTG+TGG - chr3_2:87861689-87861708 None:intergenic 40.0%
CAACTCTCTAAATCCGTGAT+AGG - chr3_2:87861709-87861728 None:intergenic 40.0%
GAAGATAAAGTTGGGACCTA+TGG + chr3_2:87861735-87861754 Msa0434840:CDS 40.0%
AACCAGTTGAGCAAACAAGT+AGG - chr3_2:87861835-87861854 None:intergenic 40.0%
ATAAAGAAGCCAAGTCTTCC+CGG - chr3_2:87862083-87862102 None:intergenic 40.0%
GGAAGACTTGGCTTCTTTAT+GGG + chr3_2:87862083-87862102 Msa0434840:intron 40.0%
!! CTTGCTAATAGGGCTTTAGA+AGG + chr3_2:87862146-87862165 Msa0434840:intron 40.0%
TTTAGAAGGTCGACATACCT+TGG + chr3_2:87862160-87862179 Msa0434840:intron 40.0%
! AGGATTAGCATTAAGCTCCA+AGG - chr3_2:87862180-87862199 None:intergenic 40.0%
CTACAACATGAATAGTAGGC+AGG + chr3_2:87862212-87862231 Msa0434840:intron 40.0%
CAAGGTGGAGTTAACTACAT+GGG - chr3_2:87862445-87862464 None:intergenic 40.0%
ACAAGGTGGAGTTAACTACA+TGG - chr3_2:87862446-87862465 None:intergenic 40.0%
TGTAGTTAACTCCACCTTGT+AGG + chr3_2:87862446-87862465 Msa0434840:intron 40.0%
CAAATGGTTGCTAAAGATCC+AGG + chr3_2:87862592-87862611 Msa0434840:intron 40.0%
TTTCAAGCATAGGCACTATC+AGG - chr3_2:87862833-87862852 None:intergenic 40.0%
TCTCTGAGCATTTCAAGCAT+AGG - chr3_2:87862843-87862862 None:intergenic 40.0%
CTTGAAATGCTCAGAGAATC+TGG + chr3_2:87862846-87862865 Msa0434840:intron 40.0%
ATGGGACCTTGTTCCATTAA+AGG + chr3_2:87862988-87863007 Msa0434840:intron 40.0%
TGGGACCTTGTTCCATTAAA+GGG + chr3_2:87862989-87863008 Msa0434840:intron 40.0%
TCAGATATGTAGTGCTTAGC+TGG + chr3_2:87863246-87863265 Msa0434840:intron 40.0%
TTAGCTGGTATCCTTGTCTA+CGG + chr3_2:87863414-87863433 Msa0434840:intron 40.0%
ACTGTCATGAATTTCCTCTG+TGG + chr3_2:87863500-87863519 Msa0434840:CDS 40.0%
! GTGGCAGCAACAATTTTGAA+TGG + chr3_2:87863537-87863556 Msa0434840:CDS 40.0%
TGTGCATCATAGGAATCCAA+GGG - chr3_2:87863683-87863702 None:intergenic 40.0%
TTGTGCATCATAGGAATCCA+AGG - chr3_2:87863684-87863703 None:intergenic 40.0%
TAAGGACTACAGTGAACAGT+TGG - chr3_2:87863737-87863756 None:intergenic 40.0%
CATGTCATGTCATCAAATGG+AGG - chr3_2:87863816-87863835 None:intergenic 40.0%
! CTCCATTTGATGACATGACA+TGG + chr3_2:87863814-87863833 Msa0434840:intron 40.0%
TGCCATGTCATGTCATCAAA+TGG - chr3_2:87863819-87863838 None:intergenic 40.0%
AAAAAATCTCTCGTGAGGAC+TGG + chr3_2:87863995-87864014 Msa0434840:intron 40.0%
AGACTCCTTCAACCAATTCA+CGG - chr3_2:87864158-87864177 None:intergenic 40.0%
AAAGGGAGTAAGAAACATCC+AGG + chr3_2:87864184-87864203 Msa0434840:intron 40.0%
AAGATAAAAAACACGCTGCC+TGG - chr3_2:87864205-87864224 None:intergenic 40.0%
TTTGCACTGTAGGATAGTAG+TGG - chr3_2:87864303-87864322 None:intergenic 40.0%
!!! AAAGCCAGGTTTTTTTCACG+AGG + chr3_2:87864320-87864339 Msa0434840:CDS 40.0%
AAATCGTGCCAACCTATTTG+AGG + chr3_2:87864344-87864363 Msa0434840:CDS 40.0%
ACATTTACGGATACAGACTG+AGG - chr3_2:87864648-87864667 None:intergenic 40.0%
! CCGTAAATGTTTGATAGCTC+AGG + chr3_2:87864658-87864677 Msa0434840:intron 40.0%
AACAGATGTTCGCAATCACT+GGG - chr3_2:87864727-87864746 None:intergenic 40.0%
TGATTGCGAACATCTGTTGT+AGG + chr3_2:87864729-87864748 Msa0434840:intron 40.0%
GATTGCGAACATCTGTTGTA+GGG + chr3_2:87864730-87864749 Msa0434840:intron 40.0%
TTCCATCGAATCAAGTTCAC+AGG + chr3_2:87864783-87864802 Msa0434840:CDS 40.0%
! TACCTGTGAACTTGATTCGA+TGG - chr3_2:87864788-87864807 None:intergenic 40.0%
TGAAGCTTCCTGTAAAGTTC+TGG + chr3_2:87864846-87864865 Msa0434840:intron 40.0%
TAACGCATCCAGAACTTTAC+AGG - chr3_2:87864857-87864876 None:intergenic 40.0%
TGTGTAGGTTCTGTATGTTG+GGG + chr3_2:87864877-87864896 Msa0434840:intron 40.0%
!! CTACTCATCAAAGGTACCAT+AGG - chr3_2:87865026-87865045 None:intergenic 40.0%
AATGCTTGTAATTCCAGAGC+TGG + chr3_2:87865151-87865170 Msa0434840:CDS 40.0%
! TTAAACTCCTCTGGGAATCA+AGG + chr3_2:87865183-87865202 Msa0434840:CDS 40.0%
! TAAACTCCTCTGGGAATCAA+GGG + chr3_2:87865184-87865203 Msa0434840:CDS 40.0%
TTCTGTTTGGCATTAGCATC+TGG - chr3_2:87865603-87865622 None:intergenic 40.0%
TGCTGAAGATAGCTTCTGTT+TGG - chr3_2:87865616-87865635 None:intergenic 40.0%
TTCCAGGTATCACATGGAAA+CGG - chr3_2:87865669-87865688 None:intergenic 40.0%
!! TGTACACTGGTTTGGAAATG+GGG - chr3_2:87866044-87866063 None:intergenic 40.0%
!! GTTGTACACTGGTTTGGAAA+TGG - chr3_2:87866046-87866065 None:intergenic 40.0%
TTTCCAAACCAGTGTACAAC+AGG + chr3_2:87866046-87866065 Msa0434840:intron 40.0%
! TTTCCTGTTGTACACTGGTT+TGG - chr3_2:87866052-87866071 None:intergenic 40.0%
! TGCATTTTCCTGTTGTACAC+TGG - chr3_2:87866057-87866076 None:intergenic 40.0%
TTATTATTAGAGCGGCTGCT+AGG + chr3_2:87866098-87866117 Msa0434840:intron 40.0%
! AAAAAAAGGCGCGATTGTCT+AGG + chr3_2:87866183-87866202 Msa0434840:intron 40.0%
TACTAGCCAAGTATCTAACC+TGG + chr3_2:87866372-87866391 Msa0434840:CDS 40.0%
! TCTGAAACTTACATTTCCCG+TGG - chr3_2:87866475-87866494 None:intergenic 40.0%
TCTGATCTGTCATGAGTTTC+TGG + chr3_2:87866533-87866552 Msa0434840:three_prime_UTR 40.0%
ACTAAAACGAGCAAGAGAAC+GGG - chr3_2:87866567-87866586 None:intergenic 40.0%
!!! AGTGCCCGGCTACAATTTTT+TGG - chr3_2:87858857-87858876 None:intergenic 45.0%
!! CTTTCTTTCTGGTTGTGGCT+TGG - chr3_2:87858886-87858905 None:intergenic 45.0%
! AGAGGTTGTTGGTGGAAATG+TGG - chr3_2:87859024-87859043 None:intergenic 45.0%
ATTGCAATGCGAGAGGTTGT+TGG - chr3_2:87859035-87859054 None:intergenic 45.0%
! GGCATCGTTTGGAACAAAAG+AGG - chr3_2:87859317-87859336 None:intergenic 45.0%
GCCTAATTCGAACTGAAACG+TGG - chr3_2:87859341-87859360 None:intergenic 45.0%
GAAGGGACGAGAAGATTTAG+CGG - chr3_2:87859591-87859610 None:intergenic 45.0%
GTTAGGCTGGATATCTTCTG+CGG - chr3_2:87860075-87860094 None:intergenic 45.0%
CAGCCTAACAATGTCAGTAC+CGG + chr3_2:87860086-87860105 Msa0434840:intron 45.0%
!! CAACCGGTACTGACATTGTT+AGG - chr3_2:87860092-87860111 None:intergenic 45.0%
AGCTAGCTACATGATCCGTA+AGG - chr3_2:87860122-87860141 None:intergenic 45.0%
ACTGGTCAGACAGATTGAAC+TGG + chr3_2:87860553-87860572 Msa0434840:intron 45.0%
GTTGTGAATGGCCAATGTTG+AGG + chr3_2:87860697-87860716 Msa0434840:intron 45.0%
CTTCCTGGTTTCCTCAACAT+TGG - chr3_2:87860711-87860730 None:intergenic 45.0%
AATGGTACCCCCAAAATAGG+CGG - chr3_2:87860779-87860798 None:intergenic 45.0%
!!! TCGGTTTTGGATCCATGTTC+AGG - chr3_2:87861072-87861091 None:intergenic 45.0%
CATGGATCCAAAACCGATAG+AGG + chr3_2:87861075-87861094 Msa0434840:CDS 45.0%
!!! CTGTTTGCCTCTATCGGTTT+TGG - chr3_2:87861085-87861104 None:intergenic 45.0%
TGTTGCTGTGGGATTTGACA+TGG + chr3_2:87861140-87861159 Msa0434840:CDS 45.0%
! CGATTTAGGATATCCTAGCG+AGG + chr3_2:87861239-87861258 Msa0434840:CDS 45.0%
CTGATAAGACAAACCTCGCT+AGG - chr3_2:87861255-87861274 None:intergenic 45.0%
ATAGTGAACCAAGAGGGAGT+TGG - chr3_2:87861368-87861387 None:intergenic 45.0%
! AACTGGAAGTACATGGTCAG+GGG + chr3_2:87861493-87861512 Msa0434840:CDS 45.0%
AGCCTACTTGTTTGCTCAAC+TGG + chr3_2:87861830-87861849 Msa0434840:CDS 45.0%
! ACGCCTTCTCGAATCTTTTC+AGG - chr3_2:87861876-87861895 None:intergenic 45.0%
AAACAATGATCGCCTAGTCC+TGG - chr3_2:87861965-87861984 None:intergenic 45.0%
TATTACCTTCCGGGAAGACT+TGG + chr3_2:87862071-87862090 Msa0434840:intron 45.0%
GGGAAGACTTGGCTTCTTTA+TGG + chr3_2:87862082-87862101 Msa0434840:intron 45.0%
! GCTTCAGCTGCTTGCTAATA+GGG + chr3_2:87862136-87862155 Msa0434840:intron 45.0%
! CCAAAGCATTTCCTACAAGG+TGG - chr3_2:87862460-87862479 None:intergenic 45.0%
CCACCTTGTAGGAAATGCTT+TGG + chr3_2:87862457-87862476 Msa0434840:intron 45.0%
! CCACCAAAGCATTTCCTACA+AGG - chr3_2:87862463-87862482 None:intergenic 45.0%
CCTTGTAGGAAATGCTTTGG+TGG + chr3_2:87862460-87862479 Msa0434840:intron 45.0%
!! TTGATTTGTGCCACCGTGAT+GGG + chr3_2:87862560-87862579 Msa0434840:intron 45.0%
TTTGCTTCAACGTCCCATCA+CGG - chr3_2:87862576-87862595 None:intergenic 45.0%
TGATGGGACGTTGAAGCAAA+TGG + chr3_2:87862576-87862595 Msa0434840:intron 45.0%
TGGTTGCTAAAGATCCAGGA+AGG + chr3_2:87862596-87862615 Msa0434840:intron 45.0%
CACTTCTCACTTTGATAGGG+TGG - chr3_2:87862636-87862655 None:intergenic 45.0%
TAGCTGGTATCCTTGTCTAC+GGG + chr3_2:87863415-87863434 Msa0434840:intron 45.0%
TTTCCTCTGTGGATCCAGAA+TGG + chr3_2:87863511-87863530 Msa0434840:CDS 45.0%
TTGATGTGGTTATCACTGGC+AGG + chr3_2:87863570-87863589 Msa0434840:CDS 45.0%
! AATTTTACCCTTCTGGCCCT+TGG + chr3_2:87863664-87863683 Msa0434840:intron 45.0%
!! GGATAGTAGTGGATGTGAAC+AGG - chr3_2:87864292-87864311 None:intergenic 45.0%
!! AAAACCTGGCTTTGCACTGT+AGG - chr3_2:87864313-87864332 None:intergenic 45.0%
AGGCACAACCTCAAATAGGT+TGG - chr3_2:87864355-87864374 None:intergenic 45.0%
TCTCAGGCACAACCTCAAAT+AGG - chr3_2:87864359-87864378 None:intergenic 45.0%
TTGAGTAGCATTCCAGTCTC+AGG - chr3_2:87864375-87864394 None:intergenic 45.0%
ATTGTGCAAACCTGAGGCAT+AGG - chr3_2:87864414-87864433 None:intergenic 45.0%
! TGTGCTATTGTGCAAACCTG+AGG - chr3_2:87864420-87864439 None:intergenic 45.0%
CAGAGGATGATGATTGTACC+TGG - chr3_2:87864568-87864587 None:intergenic 45.0%
CAACAGATGTTCGCAATCAC+TGG - chr3_2:87864728-87864747 None:intergenic 45.0%
! GTTCTGGATGCGTTATGTGT+AGG + chr3_2:87864862-87864881 Msa0434840:intron 45.0%
TGTAATTCCAGAGCTGGAGA+AGG + chr3_2:87865157-87865176 Msa0434840:CDS 45.0%
AGAAGGAGGTTAAACTCCTC+TGG + chr3_2:87865174-87865193 Msa0434840:CDS 45.0%
GAAGGAGGTTAAACTCCTCT+GGG + chr3_2:87865175-87865194 Msa0434840:CDS 45.0%
TCACATGGAAACGGACCTAA+AGG - chr3_2:87865660-87865679 None:intergenic 45.0%
TTGGACTTCCAGGTATCACA+TGG - chr3_2:87865675-87865694 None:intergenic 45.0%
TATCGCAGTTTCACGAACCA+TGG + chr3_2:87865933-87865952 Msa0434840:intron 45.0%
ATCGCAGTTTCACGAACCAT+GGG + chr3_2:87865934-87865953 Msa0434840:intron 45.0%
! GTTTTCATAAGCTGTCCCCA+TGG - chr3_2:87865953-87865972 None:intergenic 45.0%
TGGGGACAGCTTATGAAAAC+TGG + chr3_2:87865953-87865972 Msa0434840:CDS 45.0%
GAATTCTCGCTTTGCTCATC+AGG + chr3_2:87865982-87866001 Msa0434840:CDS 45.0%
CAGGTAAAATGCGACTGCTT+TGG + chr3_2:87866001-87866020 Msa0434840:intron 45.0%
! TGCGACTGCTTTGGTAGTTT+AGG + chr3_2:87866010-87866029 Msa0434840:intron 45.0%
TGGGAGTAAGGAAGAAAAGC+TGG - chr3_2:87866267-87866286 None:intergenic 45.0%
TCAATCAACTCTCCTGATGC+AGG + chr3_2:87866327-87866346 Msa0434840:intron 45.0%
! ATACTTGTCTGGAGAGTGCA+AGG - chr3_2:87866398-87866417 None:intergenic 45.0%
CTGGGTCTGTAATACTTGTC+TGG - chr3_2:87866409-87866428 None:intergenic 45.0%
!! GAATTCTAGCTTCTGAGCCA+CGG + chr3_2:87866455-87866474 Msa0434840:CDS 45.0%
!! AATTCTAGCTTCTGAGCCAC+GGG + chr3_2:87866456-87866475 Msa0434840:CDS 45.0%
TAAAACGAGCAAGAGAACGG+GGG - chr3_2:87866565-87866584 None:intergenic 45.0%
CTAAAACGAGCAAGAGAACG+GGG - chr3_2:87866566-87866585 None:intergenic 45.0%
AGTTTCGTCCACAACTAACG+TGG + chr3_2:87866661-87866680 Msa0434840:three_prime_UTR 45.0%
GTTTCGTCCACAACTAACGT+GGG + chr3_2:87866662-87866681 Msa0434840:three_prime_UTR 45.0%
TTTCGTCCACAACTAACGTG+GGG + chr3_2:87866663-87866682 Msa0434840:three_prime_UTR 45.0%
!! ATAAAAAATAAAAAAAAAAG+AGG + chr3_2:87859213-87859232 Msa0434840:five_prime_UTR 5.0%
!! TAAAAAATAAAAAAAAAAGA+GGG + chr3_2:87859214-87859233 Msa0434840:five_prime_UTR 5.0%
!!! ATTTTTGAATTAAAAATTAA+TGG - chr3_2:87862273-87862292 None:intergenic 5.0%
!!! TAATTTTTAATTCAAAAATT+TGG + chr3_2:87862274-87862293 Msa0434840:intron 5.0%
!!! TATTTTTTTTTAATATTGAA+AGG + chr3_2:87864484-87864503 Msa0434840:intron 5.0%
!!! TTTAATGTAATATTTTTTTT+AGG + chr3_2:87866888-87866907 Msa0434840:three_prime_UTR 5.0%
! TGGCTTGGATAAGTAGTGCC+CGG - chr3_2:87858871-87858890 None:intergenic 50.0%
TGAAACGTGGTGGCATCGTT+TGG - chr3_2:87859328-87859347 None:intergenic 50.0%
GCACGATGCGAATTCCTAAG+AGG + chr3_2:87859480-87859499 Msa0434840:exon 50.0%
GATATCTTCTGCGGTGTCCT+GGG - chr3_2:87860066-87860085 None:intergenic 50.0%
!! CGGTACTGACATTGTTAGGC+TGG - chr3_2:87860088-87860107 None:intergenic 50.0%
!! ATGTCAGTACCGGTTGTGCT+AGG + chr3_2:87860096-87860115 Msa0434840:intron 50.0%
TGGCCAATGTTGAGGAAACC+AGG + chr3_2:87860705-87860724 Msa0434840:intron 50.0%
ATGGTACCCCCAAAATAGGC+GGG - chr3_2:87860778-87860797 None:intergenic 50.0%
! CGTTTTCCACTATCACCGTC+GGG - chr3_2:87861027-87861046 None:intergenic 50.0%
! CCGTTTTCCACTATCACCGT+CGG - chr3_2:87861028-87861047 None:intergenic 50.0%
!! CCGACGGTGATAGTGGAAAA+CGG + chr3_2:87861025-87861044 Msa0434840:CDS 50.0%
TGGTCGTCTTCTCCTGAACA+TGG + chr3_2:87861057-87861076 Msa0434840:CDS 50.0%
! GGCTTCAGCTGCTTGCTAAT+AGG + chr3_2:87862135-87862154 Msa0434840:intron 50.0%
!! GTTGATTTGTGCCACCGTGA+TGG + chr3_2:87862559-87862578 Msa0434840:intron 50.0%
AGTGCTTAGCTGGTGTAACG+TGG + chr3_2:87863256-87863275 Msa0434840:intron 50.0%
CTACCATTCTGGATCCACAG+AGG - chr3_2:87863517-87863536 None:intergenic 50.0%
CTCTGTGGATCCAGAATGGT+AGG + chr3_2:87863515-87863534 Msa0434840:CDS 50.0%
TGTGGATCCAGAATGGTAGG+TGG + chr3_2:87863518-87863537 Msa0434840:CDS 50.0%
GGCAGGTCATGTTCTTCTCT+TGG + chr3_2:87863587-87863606 Msa0434840:intron 50.0%
TAGGAATCCAAGGGCCAGAA+GGG - chr3_2:87863674-87863693 None:intergenic 50.0%
ATAGGAATCCAAGGGCCAGA+AGG - chr3_2:87863675-87863694 None:intergenic 50.0%
AAATCTCTCGTGAGGACTGG+TGG + chr3_2:87863998-87864017 Msa0434840:intron 50.0%
CTATCCTACAGTGCAAAGCC+AGG + chr3_2:87864306-87864325 Msa0434840:intron 50.0%
! TTTGAGGTTGTGCCTGAGAC+TGG + chr3_2:87864360-87864379 Msa0434840:CDS 50.0%
TAATGGCTCTCCTATGCCTC+AGG + chr3_2:87864401-87864420 Msa0434840:CDS 50.0%
! TCACGCTTGCCAAGTTTTCC+AGG + chr3_2:87864547-87864566 Msa0434840:CDS 50.0%
TGCGAACATCTGTTGTAGGG+AGG + chr3_2:87864733-87864752 Msa0434840:intron 50.0%
ATTCGATGTGCTCAACGAGC+AGG + chr3_2:87865119-87865138 Msa0434840:intron 50.0%
AATTCCAGAGCTGGAGAAGG+AGG + chr3_2:87865160-87865179 Msa0434840:CDS 50.0%
TTAACCTCCTTCTCCAGCTC+TGG - chr3_2:87865167-87865186 None:intergenic 50.0%
CGCAGGAGCTTCAATTCTTG+AGG + chr3_2:87865433-87865452 Msa0434840:intron 50.0%
GTCCGTTTCCATGTGATACC+TGG + chr3_2:87865664-87865683 Msa0434840:intron 50.0%
TCGCAGTTTCACGAACCATG+GGG + chr3_2:87865935-87865954 Msa0434840:intron 50.0%
CAAACCTCTCAACCTGCATC+AGG - chr3_2:87866342-87866361 None:intergenic 50.0%
GCAAGGCCAGGTTAGATACT+TGG - chr3_2:87866381-87866400 None:intergenic 50.0%
TTCGTCCACAACTAACGTGG+GGG + chr3_2:87866664-87866683 Msa0434840:three_prime_UTR 50.0%
! ATTTGTGATGGTGTGGCGCG+TGG - chr3_2:87858948-87858967 None:intergenic 55.0%
GCAATGCGAGAGGTTGTTGG+TGG - chr3_2:87859032-87859051 None:intergenic 55.0%
GGTGATGCGATGTTGGCGAA+GGG - chr3_2:87859608-87859627 None:intergenic 55.0%
! TGGTGATGCGATGTTGGCGA+AGG - chr3_2:87859609-87859628 None:intergenic 55.0%
TTCGCCAACATCGCATCACC+AGG + chr3_2:87859608-87859627 Msa0434840:CDS 55.0%
! CGAACCTGGTGATGCGATGT+TGG - chr3_2:87859615-87859634 None:intergenic 55.0%
! AAGGTCTAGGGTTCACACCC+AGG + chr3_2:87860046-87860065 Msa0434840:intron 55.0%
GGATATCTTCTGCGGTGTCC+TGG - chr3_2:87860067-87860086 None:intergenic 55.0%
ACCGGTTGTGCTAGGCCTTA+CGG + chr3_2:87860104-87860123 Msa0434840:intron 55.0%
TCCGTAAGGCCTAGCACAAC+CGG - chr3_2:87860108-87860127 None:intergenic 55.0%
! AGATCAGTGGACTTGCCCGA+CGG + chr3_2:87861009-87861028 Msa0434840:CDS 55.0%
GTGGAAAACGGCCACGTGTA+TGG + chr3_2:87861037-87861056 Msa0434840:CDS 55.0%
GGAGAAGACGACCATACACG+TGG - chr3_2:87861051-87861070 None:intergenic 55.0%
GAAGTACATGGTCAGGGGCT+TGG + chr3_2:87861498-87861517 Msa0434840:CDS 55.0%
AGAAGCCAAGTCTTCCCGGA+AGG - chr3_2:87862079-87862098 None:intergenic 55.0%
GTTGCTGCCACCTACCATTC+TGG - chr3_2:87863528-87863547 None:intergenic 55.0%
AGGTGGGGAACATCTCAGCA+AGG + chr3_2:87864504-87864523 Msa0434840:intron 55.0%
GATGTGCTCAACGAGCAGGA+TGG + chr3_2:87865123-87865142 Msa0434840:intron 55.0%
TCTGGGAATCAAGGGACACC+CGG + chr3_2:87865192-87865211 Msa0434840:CDS 55.0%
! CTCTCCTGATGCAGGTTGAG+AGG + chr3_2:87866335-87866354 Msa0434840:intron 55.0%
GGGCAGCATTCCTTTGCGTT+TGG + chr3_2:87866500-87866519 Msa0434840:three_prime_UTR 55.0%
TAGCACCCCCACGTTAGTTG+TGG - chr3_2:87866672-87866691 None:intergenic 55.0%
! AACATACCCGTGCTGACGCA+CGG + chr3_2:87866794-87866813 Msa0434840:three_prime_UTR 55.0%
GACTTGCCCGACGGTGATAG+TGG + chr3_2:87861018-87861037 Msa0434840:CDS 60.0%
GCTTCAACGTCCCATCACGG+TGG - chr3_2:87862573-87862592 None:intergenic 60.0%
GTGCTCAACGAGCAGGATGG+AGG + chr3_2:87865126-87865145 Msa0434840:intron 60.0%
GGGTGTCCCTTGATTCCCAG+AGG - chr3_2:87865193-87865212 None:intergenic 60.0%
GGAATCAAGGGACACCCGGA+AGG + chr3_2:87865196-87865215 Msa0434840:CDS 60.0%
GAGTGAGCGTGATCGCATCG+AGG + chr3_2:87865455-87865474 Msa0434840:CDS 60.0%
! TGTCTGGAGAGTGCAAGGCC+AGG - chr3_2:87866393-87866412 None:intergenic 60.0%
ACGAGCAAGAGAACGGGGGT+GGG - chr3_2:87866561-87866580 None:intergenic 60.0%
AACGAGCAAGAGAACGGGGG+TGG - chr3_2:87866562-87866581 None:intergenic 60.0%
! ACATACCCGTGCTGACGCAC+GGG + chr3_2:87866795-87866814 Msa0434840:three_prime_UTR 60.0%
ACTGTACCCGTGCGTCAGCA+CGG - chr3_2:87866804-87866823 None:intergenic 60.0%
!! GTGGGGGTGCTAGTGTGCAG+TGG + chr3_2:87866680-87866699 Msa0434840:three_prime_UTR 65.0%
CTGTACCCGTGCGTCAGCAC+GGG - chr3_2:87866803-87866822 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 87858812 87866951 87858812 ID=Msa0434840;Name=Msa0434840
chr3_2 mRNA 87858812 87866951 87858812 ID=Msa0434840-mRNA-1;Parent=Msa0434840;Name=Msa0434840-mRNA-1;_AED=0.14;_eAED=0.14;_QI=673|0.92|1|1|1|1|15|465|540
chr3_2 exon 87858812 87859629 87858812 ID=Msa0434840-mRNA-1:exon:25652;Parent=Msa0434840-mRNA-1
chr3_2 exon 87860944 87861260 87860944 ID=Msa0434840-mRNA-1:exon:25653;Parent=Msa0434840-mRNA-1
chr3_2 exon 87861475 87861552 87861475 ID=Msa0434840-mRNA-1:exon:25654;Parent=Msa0434840-mRNA-1
chr3_2 exon 87861678 87861898 87861678 ID=Msa0434840-mRNA-1:exon:25655;Parent=Msa0434840-mRNA-1
chr3_2 exon 87863481 87863591 87863481 ID=Msa0434840-mRNA-1:exon:25656;Parent=Msa0434840-mRNA-1
chr3_2 exon 87864317 87864422 87864317 ID=Msa0434840-mRNA-1:exon:25657;Parent=Msa0434840-mRNA-1
chr3_2 exon 87864506 87864568 87864506 ID=Msa0434840-mRNA-1:exon:25658;Parent=Msa0434840-mRNA-1
chr3_2 exon 87864751 87864804 87864751 ID=Msa0434840-mRNA-1:exon:25659;Parent=Msa0434840-mRNA-1
chr3_2 exon 87864884 87864941 87864884 ID=Msa0434840-mRNA-1:exon:25660;Parent=Msa0434840-mRNA-1
chr3_2 exon 87865141 87865217 87865141 ID=Msa0434840-mRNA-1:exon:25661;Parent=Msa0434840-mRNA-1
chr3_2 exon 87865438 87865508 87865438 ID=Msa0434840-mRNA-1:exon:25662;Parent=Msa0434840-mRNA-1
chr3_2 exon 87865590 87865650 87865590 ID=Msa0434840-mRNA-1:exon:25663;Parent=Msa0434840-mRNA-1
chr3_2 exon 87865741 87865800 87865741 ID=Msa0434840-mRNA-1:exon:25664;Parent=Msa0434840-mRNA-1
chr3_2 exon 87865941 87866003 87865941 ID=Msa0434840-mRNA-1:exon:25665;Parent=Msa0434840-mRNA-1
chr3_2 exon 87866349 87866951 87866349 ID=Msa0434840-mRNA-1:exon:25666;Parent=Msa0434840-mRNA-1
chr3_2 five_prime_UTR 87858812 87859484 87858812 ID=Msa0434840-mRNA-1:five_prime_utr;Parent=Msa0434840-mRNA-1
chr3_2 CDS 87859485 87859629 87859485 ID=Msa0434840-mRNA-1:cds;Parent=Msa0434840-mRNA-1
chr3_2 CDS 87860944 87861260 87860944 ID=Msa0434840-mRNA-1:cds;Parent=Msa0434840-mRNA-1
chr3_2 CDS 87861475 87861552 87861475 ID=Msa0434840-mRNA-1:cds;Parent=Msa0434840-mRNA-1
chr3_2 CDS 87861678 87861898 87861678 ID=Msa0434840-mRNA-1:cds;Parent=Msa0434840-mRNA-1
chr3_2 CDS 87863481 87863591 87863481 ID=Msa0434840-mRNA-1:cds;Parent=Msa0434840-mRNA-1
chr3_2 CDS 87864317 87864422 87864317 ID=Msa0434840-mRNA-1:cds;Parent=Msa0434840-mRNA-1
chr3_2 CDS 87864506 87864568 87864506 ID=Msa0434840-mRNA-1:cds;Parent=Msa0434840-mRNA-1
chr3_2 CDS 87864751 87864804 87864751 ID=Msa0434840-mRNA-1:cds;Parent=Msa0434840-mRNA-1
chr3_2 CDS 87864884 87864941 87864884 ID=Msa0434840-mRNA-1:cds;Parent=Msa0434840-mRNA-1
chr3_2 CDS 87865141 87865217 87865141 ID=Msa0434840-mRNA-1:cds;Parent=Msa0434840-mRNA-1
chr3_2 CDS 87865438 87865508 87865438 ID=Msa0434840-mRNA-1:cds;Parent=Msa0434840-mRNA-1
chr3_2 CDS 87865590 87865650 87865590 ID=Msa0434840-mRNA-1:cds;Parent=Msa0434840-mRNA-1
chr3_2 CDS 87865741 87865800 87865741 ID=Msa0434840-mRNA-1:cds;Parent=Msa0434840-mRNA-1
chr3_2 CDS 87865941 87866003 87865941 ID=Msa0434840-mRNA-1:cds;Parent=Msa0434840-mRNA-1
chr3_2 CDS 87866349 87866486 87866349 ID=Msa0434840-mRNA-1:cds;Parent=Msa0434840-mRNA-1
chr3_2 three_prime_UTR 87866487 87866951 87866487 ID=Msa0434840-mRNA-1:three_prime_utr;Parent=Msa0434840-mRNA-1
Gene Sequence

>Msa0434840

ATGCGAATTCCTAAGAGGCTATTCACATTTTCTCTCTCTAACTTCTCTCCTCAACTCGTATCACCTCTTTTATCTTCTCGGATTTCCTTTGCATTTGGAATTTCCGCTAAATCTTCTCGTCCCTTCGCCAACATCGCATCACCAGGAGCTAGCCAATTGCATTCTCAATCTTCAATGGATGAGAATCATGATGGTGGTATACATGACTCAAGATCAGTGGACTTGCCCGACGGTGATAGTGGAAAACGGCCACGTGTATGGTCGTCTTCTCCTGAACATGGATCCAAAACCGATAGAGGCAAACAGATATTTTGTAACCGGTCACTGAATATGAAGAACATTGTTGCTGTGGGATTTGACATGGACTATACTCTGGCACAATACAAGCCTGAAACTTTTGAATCCCTTGCTTATCAAGGCACAATTAAAAAGCTGGTTTACGATTTAGGATATCCTAGCGAGTTACTAAGTTGGTCTTTTAACTGGAAGTACATGGTCAGGGGCTTGGTTCTTGACAAAAAACGAGGAAATATCTTGAAGATGGATCGCCACAAGTATGTGAAAGTAGCCTATCACGGATTTAGAGAGTTGTCAAAAGAAGATAAAGTTGGGACCTATGGAAATACTTTAGTACGCGATTCATTTGACGAGCCAGACTATGCTCTAATTGATACACTTTTTTCTCTTGCGGAAGCCTACTTGTTTGCTCAACTGGTTGATTTTAAGGATAGTAATCCTGAAAAGATTCGAGAAGGCGTTGATTTATGGGACTATACAAATACTGTCATGAATTTCCTCTGTGGATCCAGAATGGTAGGTGGCAGCAACAATTTTGAATGGCTTCAATACTTTGATGTGGTTATCACTGGCAGTGCAAAGCCAGGTTTTTTTCACGAGGAAAATCGTGCCAACCTATTTGAGGTTGTGCCTGAGACTGGAATGCTACTCAATACAGATAATGGCTCTCCTATGCCTCAGGTGGGGAACATCTCAGCAAGGATATTCACAGAAGCAACGAATCACGCTTGCCAAGTTTTCCAGGGAGGCAATGTAGCTCATCTGCATAAACTGCTTTCCATCGAATCAAGTTCACAGGTTCTGTATGTTGGGGATCACATTTACGGAGACATATTACGTAGCAAAAAGGTTCTTGGATGGAGGACAATGCTTGTAATTCCAGAGCTGGAGAAGGAGGTTAAACTCCTCTGGGAATCAAGGGACACCCGGAAGGAGCTTCAATTCTTGAGGAGTGAGCGTGATCGCATCGAGGATGAAGTACATCATTTGAAGTGGTCTCTTAAATTTAAGAATCCAGATGCTAATGCCAAACAGAAGCTATCTTCAGCACTTGATAAATTGGAGCTTGAAAGAGAGAAAATGCGATTAATCCATCAAGAAGCTCAAAGAAAATTACATCAAAGGTTTCACGAACCATGGGGACAGCTTATGAAAACTGGTTATCAGAATTCTCGCTTTGCTCATCAGGTTGAGAGGTTTGCCTGTCTTTATACTAGCCAAGTATCTAACCTGGCCTTGCACTCTCCAGACAAGTATTACAGACCCAGTGAAGATTTTATGCAGCATGAATTTGGAATTCTAGCTTCTGAGCCACGGGAAATGTAA
Protein sequence

>Msa0434840

MRIPKRLFTFSLSNFSPQLVSPLLSSRISFAFGISAKSSRPFANIASPGASQLHSQSSMDENHDGGIHDSRSVDLPDGDSGKRPRVWSSSPEHGSKTDRGKQIFCNRSLNMKNIVAVGFDMDYTLAQYKPETFESLAYQGTIKKLVYDLGYPSELLSWSFNWKYMVRGLVLDKKRGNILKMDRHKYVKVAYHGFRELSKEDKVGTYGNTLVRDSFDEPDYALIDTLFSLAEAYLFAQLVDFKDSNPEKIREGVDLWDYTNTVMNFLCGSRMVGGSNNFEWLQYFDVVITGSAKPGFFHEENRANLFEVVPETGMLLNTDNGSPMPQVGNISARIFTEATNHACQVFQGGNVAHLHKLLSIESSSQVLYVGDHIYGDILRSKKVLGWRTMLVIPELEKEVKLLWESRDTRKELQFLRSERDRIEDEVHHLKWSLKFKNPDANAKQKLSSALDKLELEREKMRLIHQEAQRKLHQRFHEPWGQLMKTGYQNSRFAHQVERFACLYTSQVSNLALHSPDKYYRPSEDFMQHEFGILASEPREM*