AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0752540


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0752540 MtrunA17_Chr5g0398351 95.767 756 32 0 1 756 752 1507 0.0 1475
Msa0752540 MtrunA17_Chr5g0398351 91.172 725 62 2 33 756 13 736 0.0 1347
Msa0752540 MtrunA17_Chr5g0398401 89.683 756 78 0 1 756 1 756 0.0 1383
Msa0752540 MtrunA17_Chr5g0398241 89.801 755 77 0 1 755 1 755 0.0 1381
Msa0752540 MtrunA17_Chr5g0398331 65.088 739 246 6 22 755 21 752 0.0 945
Msa0752540 MtrunA17_Chr5g0398311 63.373 759 256 8 8 755 1 748 0.0 930
Msa0752540 MtrunA17_Chr4g0057061 57.682 768 301 14 1 755 20 776 0.0 847
Msa0752540 MtrunA17_Chr7g0262161 46.082 753 357 19 38 753 20 760 0.0 600
Msa0752540 MtrunA17_Chr2g0300751 43.799 758 365 15 44 752 26 771 0.0 565
Msa0752540 MtrunA17_Chr4g0053781 44.173 738 371 15 44 753 30 754 0.0 563
Msa0752540 MtrunA17_Chr5g0401511 43.959 778 383 19 11 756 7 763 0.0 556
Msa0752540 MtrunA17_Chr4g0037221 43.351 752 368 17 44 753 32 767 0.0 548
Msa0752540 MtrunA17_Chr4g0070391 44.444 783 370 20 2 752 1 750 0.0 547
Msa0752540 MtrunA17_Chr7g0246461 42.254 781 376 19 12 756 1 742 0.0 541
Msa0752540 MtrunA17_Chr4g0020651 42.323 775 399 18 10 756 5 759 0.0 537
Msa0752540 MtrunA17_Chr1g0152771 41.582 784 395 17 8 752 2 761 7.30e-177 525
Msa0752540 MtrunA17_Chr8g0344331 42.404 757 378 21 39 752 32 773 1.58e-176 525
Msa0752540 MtrunA17_Chr8g0344971 43.122 756 365 17 44 756 29 762 1.65e-169 506
Msa0752540 MtrunA17_Chr1g0204321 39.675 799 417 17 1 755 1 778 7.07e-167 500
Msa0752540 MtrunA17_Chr3g0120521 39.281 751 408 15 42 753 28 769 2.53e-162 488
Msa0752540 MtrunA17_Chr1g0189561 39.141 792 410 19 2 753 1 760 1.06e-161 486
Msa0752540 MtrunA17_Chr8g0345971 39.182 758 383 20 45 753 30 758 1.62e-160 483
Msa0752540 MtrunA17_Chr1g0189251 39.575 753 382 22 45 753 30 753 6.93e-157 474
Msa0752540 MtrunA17_Chr3g0134621 39.744 780 381 17 8 752 9 734 1.03e-155 470
Msa0752540 MtrunA17_Chr8g0377961 39.501 762 416 15 22 753 28 774 1.93e-155 471
Msa0752540 MtrunA17_Chr4g0076611 39.660 706 380 13 81 753 1 693 2.97e-154 465
Msa0752540 MtrunA17_Chr8g0345991 38.794 763 375 20 45 753 29 753 1.52e-152 462
Msa0752540 MtrunA17_Chr8g0345981 38.008 763 396 21 38 753 25 757 1.35e-151 460
Msa0752540 MtrunA17_Chr4g0057481 42.556 665 345 13 121 755 34 691 1.91e-151 457
Msa0752540 MtrunA17_Chr7g0276151 38.974 780 400 19 18 753 8 755 8.32e-151 458
Msa0752540 MtrunA17_Chr4g0057471 40.423 710 379 15 78 753 9 708 1.98e-148 451
Msa0752540 MtrunA17_Chr4g0057531 41.374 713 371 16 78 753 74 776 3.34e-148 452
Msa0752540 MtrunA17_Chr7g0248871 37.546 807 405 28 2 753 1 763 1.34e-147 450
Msa0752540 MtrunA17_Chr5g0407701 40.514 701 368 17 82 753 69 749 1.12e-146 447
Msa0752540 MtrunA17_Chr8g0369891 39.628 699 375 17 82 753 74 752 2.17e-144 441
Msa0752540 MtrunA17_Chr7g0266051 39.612 722 375 24 64 756 18 707 5.75e-142 434
Msa0752540 MtrunA17_Chr2g0285121 38.399 737 375 18 81 756 67 785 2.04e-139 429
Msa0752540 MtrunA17_Chr2g0285111 37.468 774 416 18 40 756 26 788 3.62e-139 429
Msa0752540 MtrunA17_Chr7g0246451 37.341 707 382 19 78 756 74 747 6.42e-138 424
Msa0752540 MtrunA17_Chr2g0303881 38.275 742 374 21 64 753 16 725 1.29e-137 423
Msa0752540 MtrunA17_Chr8g0354771 37.917 749 414 16 45 753 26 763 3.80e-137 423
Msa0752540 MtrunA17_Chr8g0351011 37.892 702 380 17 78 753 80 751 6.08e-137 422
Msa0752540 MtrunA17_Chr5g0423261 41.746 630 330 14 155 755 2 623 9.18e-137 417
Msa0752540 MtrunA17_Chr3g0136151 39.636 714 368 21 81 750 64 758 3.50e-135 417
Msa0752540 MtrunA17_Chr4g0057491 41.017 629 334 14 156 755 3 623 5.15e-135 413
Msa0752540 MtrunA17_Chr8g0345961 37.262 789 411 22 10 753 7 756 1.11e-134 416
Msa0752540 MtrunA17_Chr4g0057511 41.707 621 325 13 163 755 6 617 1.18e-134 412
Msa0752540 MtrunA17_Chr7g0250481 38.019 747 377 28 78 756 72 800 1.25e-132 412
Msa0752540 MtrunA17_Chr4g0026641 39.607 712 374 21 78 753 62 753 1.60e-132 410
Msa0752540 MtrunA17_Chr3g0143251 36.561 785 444 19 2 753 1 764 4.65e-130 404
Msa0752540 MtrunA17_Chr8g0354741 39.775 621 349 10 150 753 21 633 5.74e-130 400
Msa0752540 MtrunA17_Chr6g0470881 37.653 733 388 20 57 753 30 729 4.58e-129 401
Msa0752540 MtrunA17_Chr4g0057461 39.494 633 341 14 156 753 3 628 8.75e-129 397
Msa0752540 MtrunA17_Chr7g0250371 38.649 740 386 28 69 756 64 787 3.02e-128 400
Msa0752540 MtrunA17_Chr1g0170081 36.005 761 440 19 6 753 4 730 6.45e-128 398
Msa0752540 MtrunA17_Chr1g0146251 36.446 771 429 22 5 753 3 734 1.89e-127 397
Msa0752540 MtrunA17_Chr6g0470851 36.799 731 397 19 57 753 30 729 1.47e-126 394
Msa0752540 MtrunA17_Chr1g0146271 36.234 770 430 21 5 753 3 732 1.90e-126 394
Msa0752540 MtrunA17_Chr7g0250411 38.017 726 385 25 78 753 73 783 3.85e-126 395
Msa0752540 MtrunA17_Chr8g0334491 36.997 746 416 21 26 753 18 727 1.07e-124 389
Msa0752540 MtrunA17_Chr8g0334521 35.425 765 422 19 12 753 18 733 1.53e-123 387
Msa0752540 MtrunA17_Chr7g0250391 38.263 737 392 26 69 756 63 785 2.32e-123 387
Msa0752540 MtrunA17_Chr7g0227991 36.219 693 400 14 78 756 72 736 2.80e-123 386
Msa0752540 MtrunA17_Chr3g0079971 35.891 769 425 24 4 748 2 726 8.94e-122 382
Msa0752540 MtrunA17_Chr7g0250331 36.842 760 394 27 69 756 64 809 4.00e-116 369
Msa0752540 MtrunA17_Chr7g0248861 38.449 619 314 18 39 610 24 622 5.24e-109 352
Msa0752540 MtrunA17_Chr7g0248861 48.729 236 103 7 137 357 627 859 1.90e-49 187
Msa0752540 MtrunA17_Chr5g0439271 39.367 569 312 11 213 754 40 602 6.29e-106 336
Msa0752540 MtrunA17_Chr8g0376841 38.491 530 277 14 78 577 75 585 9.29e-103 328
Msa0752540 MtrunA17_Chr4g0071871 34.100 739 405 27 80 751 88 811 1.90e-94 312
Msa0752540 MtrunA17_Chr2g0302951 33.514 740 419 21 82 756 110 841 3.52e-93 309
Msa0752540 MtrunA17_Chr2g0298601 33.561 733 413 23 82 751 90 811 5.71e-89 297
Msa0752540 MtrunA17_Chr5g0447171 38.086 512 264 11 291 756 6 510 5.85e-89 289
Msa0752540 MtrunA17_Chr8g0380961 31.334 817 475 29 15 756 43 848 2.14e-86 291
Msa0752540 MtrunA17_Chr2g0301011 35.581 534 277 12 115 640 9 483 5.31e-83 273
Msa0752540 MtrunA17_Chr4g0075331 30.417 743 424 26 84 754 17 738 8.52e-70 243
Msa0752540 MtrunA17_Chr7g0261691 38.551 345 187 8 146 470 7 346 1.88e-66 224
Msa0752540 MtrunA17_Chr3g0143241 34.221 488 285 14 2 470 1 471 1.17e-65 228
Msa0752540 MtrunA17_Chr7g0250461 35.149 404 233 12 78 454 73 474 2.26e-59 209
Msa0752540 MtrunA17_Chr6g0480721 42.230 296 143 7 472 755 321 600 1.05e-58 210
Msa0752540 MtrunA17_Chr6g0480721 40.594 303 164 6 85 377 9 305 1.49e-58 210
Msa0752540 MtrunA17_Chr7g0261701 41.912 272 143 4 489 753 26 289 1.33e-58 201
Msa0752540 MtrunA17_Chr3g0097061 38.462 299 171 7 115 408 9 299 5.87e-54 192
Msa0752540 MtrunA17_Chr3g0097061 52.381 105 43 1 534 638 332 429 4.55e-24 105
Msa0752540 MtrunA17_Chr8g0346361 40.984 305 152 9 463 753 206 496 6.68e-54 194
Msa0752540 MtrunA17_Chr8g0346361 43.386 189 103 2 171 358 6 191 3.81e-40 155
Msa0752540 MtrunA17_Chr7g0250441 45.000 280 137 9 485 753 9 282 7.46e-54 188
Msa0752540 MtrunA17_Chr4g0026651 39.752 322 130 13 96 362 2 314 2.52e-52 184
Msa0752540 MtrunA17_Chr4g0026661 41.634 257 130 7 508 753 12 259 4.71e-50 176
Msa0752540 MtrunA17_Chr3g0103071 37.324 284 168 4 266 540 1 283 2.01e-46 167
Msa0752540 MtrunA17_Chr2g0301911 32.578 353 206 8 169 511 30 360 3.50e-46 169
Msa0752540 MtrunA17_Chr3g0105461 34.435 363 179 9 2 351 1 317 1.74e-44 164
Msa0752540 MtrunA17_Chr2g0312861 40.625 256 132 6 508 753 1 246 5.55e-44 160
Msa0752540 MtrunA17_Chr2g0301031 40.234 256 133 6 508 753 1 246 8.25e-44 158
Msa0752540 MtrunA17_Chr3g0105451 36.770 291 150 6 476 750 3 275 2.35e-41 152
Msa0752540 MtrunA17_Chr5g0398341 73.958 96 25 0 542 637 1 96 2.71e-41 145
Msa0752540 MtrunA17_Chr2g0312841 42.286 175 98 2 171 344 11 183 2.84e-39 143
Msa0752540 MtrunA17_Chr4g0071191 36.771 223 113 5 472 679 41 250 3.79e-38 142
Msa0752540 MtrunA17_Chr2g0301921 39.352 216 116 6 542 753 1 205 1.24e-35 134
Msa0752540 MtrunA17_Chr4g0035881 51.095 137 56 2 450 575 183 319 4.10e-33 130
Msa0752540 MtrunA17_Chr4g0035881 47.887 142 72 2 217 356 4 145 1.95e-28 117
Msa0752540 MtrunA17_Chr3g0103061 35.859 198 99 4 78 254 69 259 1.69e-28 115
Msa0752540 MtrunA17_Chr5g0418921 47.794 136 58 3 479 603 3 136 1.87e-28 112
Msa0752540 MtrunA17_Chr5g0436021 42.500 160 85 4 190 344 30 187 2.23e-27 109
Msa0752540 MtrunA17_Chr3g0142981 43.137 153 53 3 209 356 51 174 1.84e-24 101
Msa0752540 MtrunA17_Chr5g0436031 33.939 165 99 3 595 755 23 181 5.27e-22 95.1
Msa0752540 MtrunA17_Chr3g0143231 56.818 88 32 1 492 573 2 89 2.91e-21 89.0
Msa0752540 MtrunA17_Chr2g0301021 27.077 325 153 10 124 438 98 348 1.29e-20 94.7
Msa0752540 MtrunA17_Chr8g0376851 28.161 174 117 3 585 753 1 171 4.43e-19 85.5
Msa0752540 MtrunA17_Chr3g0142971 54.762 84 32 1 492 569 2 85 1.52e-18 80.9
Msa0752540 MtrunA17_Chr7g0248851 34.868 152 85 5 609 753 2 146 1.24e-17 80.5
Msa0752540 MtrunA17_Chr3g0103081 36.054 147 86 6 609 753 2 142 1.60e-16 77.4
Msa0752540 MtrunA17_Chr3g0143021 38.000 100 62 0 81 180 7 106 8.72e-16 73.9
Msa0752540 MtrunA17_Chr5g0439281 30.000 190 107 5 7 181 2 180 1.33e-13 70.5
Msa0752540 MtrunA17_Chr3g0143011 53.571 56 26 0 305 360 2 57 6.50e-13 64.3
Msa0752540 MtrunA17_Chr3g0077671 72.500 40 11 0 534 573 238 277 5.11e-12 67.8
Msa0752540 MtrunA17_Chr5g0434941 45.333 75 35 2 271 340 1 74 3.15e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0752540 AT1G04110.1 44.211 760 364 19 44 756 27 773 0.0 580
Msa0752540 AT5G67360.1 44.640 737 368 17 44 753 31 754 0.0 566
Msa0752540 AT2G05920.1 45.209 741 365 16 38 752 23 748 0.0 554
Msa0752540 AT3G14067.1 40.897 780 404 17 11 753 8 767 0.0 550
Msa0752540 AT3G14240.1 42.876 751 386 15 44 756 27 772 0.0 549
Msa0752540 AT4G34980.1 40.816 784 400 18 8 753 1 758 0.0 540
Msa0752540 AT1G01900.1 41.545 751 382 17 44 756 43 774 1.69e-170 509
Msa0752540 AT5G51750.1 39.744 780 416 17 16 755 11 776 2.22e-165 497
Msa0752540 AT5G59810.1 38.441 744 414 15 44 753 41 774 1.83e-153 466
Msa0752540 AT2G04160.1 38.974 721 407 11 61 753 55 770 3.88e-152 462
Msa0752540 AT5G45650.2 38.005 792 397 20 32 753 21 788 9.45e-146 446
Msa0752540 AT5G45650.1 38.005 792 397 20 32 753 21 788 9.45e-146 446
Msa0752540 AT5G59090.1 40.203 689 369 17 80 753 68 728 5.35e-143 437
Msa0752540 AT5G03620.1 37.927 791 413 26 9 756 5 760 1.60e-142 437
Msa0752540 AT5G59090.2 40.058 689 365 17 80 753 68 723 1.69e-142 436
Msa0752540 AT5G59090.3 40.203 689 367 18 80 753 68 726 2.30e-141 433
Msa0752540 AT4G10550.1 37.277 786 434 19 5 753 3 766 1.80e-139 429
Msa0752540 AT5G67090.1 37.193 734 384 17 45 743 25 716 6.58e-139 427
Msa0752540 AT1G32960.1 38.503 748 406 18 45 753 33 765 1.01e-138 427
Msa0752540 AT1G32940.1 38.522 758 413 18 31 753 23 762 2.79e-138 426
Msa0752540 AT4G10550.3 37.728 766 423 18 28 753 31 782 8.27e-138 426
Msa0752540 AT4G10540.1 38.452 775 424 19 15 753 6 763 3.09e-137 424
Msa0752540 AT5G59100.1 38.561 695 383 19 78 753 68 737 1.05e-136 421
Msa0752540 AT1G32940.4 39.221 719 392 16 69 753 4 711 4.62e-136 419
Msa0752540 AT1G32940.2 39.221 719 392 16 69 753 4 711 4.62e-136 419
Msa0752540 AT4G10550.4 38.835 721 391 16 69 753 4 710 6.19e-136 419
Msa0752540 AT4G10550.2 38.835 721 391 16 69 753 4 710 6.19e-136 419
Msa0752540 AT4G10520.1 36.788 772 434 17 8 753 1 744 1.47e-135 419
Msa0752540 AT5G59120.1 38.409 729 396 18 45 753 32 727 1.43e-134 416
Msa0752540 AT3G46850.1 36.148 758 446 17 10 753 1 734 2.64e-133 412
Msa0752540 AT1G32950.1 38.762 743 410 17 45 753 30 761 6.12e-133 412
Msa0752540 AT1G20160.2 38.505 709 386 21 81 753 28 722 8.38e-133 411
Msa0752540 AT4G00230.1 38.669 706 370 20 78 753 71 743 1.61e-132 410
Msa0752540 AT1G20160.1 38.505 709 386 21 81 753 67 761 1.93e-132 411
Msa0752540 AT3G46840.1 36.436 752 435 18 18 753 10 734 6.27e-132 409
Msa0752540 AT1G32950.2 39.276 718 392 16 69 753 4 710 6.78e-131 405
Msa0752540 AT4G10510.1 38.038 744 419 14 42 753 20 753 1.58e-130 406
Msa0752540 AT5G59130.4 35.752 758 434 19 10 753 7 725 2.24e-130 405
Msa0752540 AT4G10510.3 37.004 781 442 15 5 753 3 765 2.60e-130 406
Msa0752540 AT5G59130.3 38.081 688 379 18 80 753 32 686 6.33e-130 402
Msa0752540 AT5G59130.1 35.884 758 429 20 10 753 7 721 1.80e-129 402
Msa0752540 AT1G20150.1 38.601 715 386 19 85 756 69 773 2.83e-129 403
Msa0752540 AT5G58840.1 38.808 688 355 20 80 753 71 706 1.68e-128 399
Msa0752540 AT4G10510.2 38.920 704 389 13 81 753 1 694 1.73e-128 399
Msa0752540 AT4G10510.4 38.687 716 398 13 69 753 4 709 1.89e-128 399
Msa0752540 AT5G59130.2 35.884 758 423 21 10 753 7 715 2.31e-128 399
Msa0752540 AT5G59190.1 37.979 653 362 15 81 718 32 656 7.95e-128 397
Msa0752540 AT4G21630.1 35.878 786 422 18 11 753 7 753 7.59e-127 396
Msa0752540 AT1G66220.1 37.112 741 406 18 45 756 38 747 1.24e-126 395
Msa0752540 AT5G58830.1 38.205 691 356 21 80 753 69 705 3.14e-126 393
Msa0752540 AT4G10530.1 35.578 787 414 21 8 753 1 735 4.97e-126 394
Msa0752540 AT1G66210.1 35.815 779 418 21 14 753 15 750 3.55e-125 392
Msa0752540 AT5G58820.1 37.916 691 357 21 80 753 65 700 1.27e-124 389
Msa0752540 AT4G21650.1 36.268 761 391 20 45 753 42 760 7.04e-122 383
Msa0752540 AT5G03620.2 40.772 596 301 18 9 575 5 577 1.31e-118 369
Msa0752540 AT5G45640.1 37.311 729 376 21 90 753 39 751 5.10e-118 373
Msa0752540 AT5G11940.1 36.338 721 394 17 68 753 62 752 6.60e-118 373
Msa0752540 AT4G26330.2 35.327 719 405 22 81 755 21 723 8.23e-114 361
Msa0752540 AT4G21326.1 35.552 706 400 16 78 756 13 690 3.02e-112 356
Msa0752540 AT4G21323.1 36.170 705 389 19 81 753 118 793 4.32e-110 353
Msa0752540 AT4G26330.1 34.652 733 405 23 81 755 21 737 5.94e-110 352
Msa0752540 AT4G15040.2 36.667 690 389 17 78 753 30 685 2.01e-108 346
Msa0752540 AT4G15040.1 36.667 690 389 17 78 753 30 685 2.01e-108 346
Msa0752540 AT1G32970.1 38.174 668 354 22 117 753 83 722 4.03e-105 338
Msa0752540 AT4G00230.2 41.065 526 264 14 78 579 71 574 2.25e-104 332
Msa0752540 AT1G32940.3 39.007 564 304 14 45 575 30 586 7.25e-102 326
Msa0752540 AT5G58840.3 39.841 502 253 13 80 573 71 531 5.33e-96 309
Msa0752540 AT5G44530.1 32.172 746 420 25 82 756 106 836 1.14e-94 313
Msa0752540 AT1G30600.1 31.840 848 460 32 8 756 1 829 1.51e-92 307
Msa0752540 AT2G19170.1 32.659 741 414 26 80 751 84 808 4.32e-92 306
Msa0752540 AT2G19170.2 32.659 741 414 26 80 751 84 808 4.32e-92 306
Msa0752540 AT2G39850.1 32.558 731 409 28 79 753 63 765 3.16e-91 303
Msa0752540 AT5G44530.2 31.388 771 418 27 82 756 106 861 2.41e-90 302
Msa0752540 AT4G30020.3 32.568 740 417 27 80 751 84 809 5.38e-90 300
Msa0752540 AT4G30020.1 32.568 740 417 27 80 751 84 809 5.38e-90 300
Msa0752540 AT4G30020.4 32.568 740 417 27 80 751 84 809 5.38e-90 300
Msa0752540 AT4G30020.2 32.568 740 417 27 80 751 84 809 5.38e-90 300
Msa0752540 AT4G20430.3 30.780 744 435 24 82 756 119 851 1.13e-87 295
Msa0752540 AT4G20430.1 30.780 744 435 24 82 756 119 851 1.13e-87 295
Msa0752540 AT4G20430.2 31.020 735 421 25 82 756 119 827 1.84e-85 288
Msa0752540 AT1G20160.3 38.530 449 249 11 81 509 67 508 3.28e-78 262
Msa0752540 AT1G62340.1 31.855 744 423 29 82 753 98 829 4.91e-72 251
Msa0752540 AT5G58840.2 37.819 431 226 12 80 509 71 460 3.44e-69 235
Msa0752540 AT5G44530.3 32.329 498 275 17 82 523 106 597 8.30e-57 205
Msa0752540 AT4G21640.1 42.295 305 159 6 457 753 432 727 1.11e-55 204
Msa0752540 AT4G21640.1 34.177 395 220 10 5 362 3 394 1.67e-54 201
Msa0752540 AT1G32980.1 46.774 186 92 4 538 719 3 185 1.31e-39 145
Msa0752540 AT5G59110.1 37.195 164 93 4 598 755 8 167 3.60e-23 97.4

Find 160 sgRNAs with CRISPR-Local

Find 374 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTCAGATCAATGTTCTTTA+AGG 0.079089 5_2:-6266049 None:intergenic
CTATCCCTTTCACTTGGTTT+AGG 0.244036 5_2:+6265703 Msa0752540:CDS
CCGGGATCATTTGCTTTAAC+AGG 0.265358 5_2:-6266675 None:intergenic
AACTCACAGTCCAACTTTCT+TGG 0.265626 5_2:+6265234 Msa0752540:CDS
CTTGTATATGCAGGCTCATT+TGG 0.276375 5_2:+6265982 Msa0752540:CDS
TTATTCAAAGGAACAGTAAT+TGG 0.277826 5_2:+6266297 Msa0752540:CDS
CCTTCTTTCTCTATTCTGTT+GGG 0.284617 5_2:+6266840 Msa0752540:CDS
CAGCAAATACTGATGTAATT+TGG 0.285021 5_2:-6264937 None:intergenic
CTTGGAAAAGGTGTCATAAT+TGG 0.287279 5_2:+6265295 Msa0752540:CDS
TGAATTTATACCACAAATAA+AGG 0.290855 5_2:+6267019 Msa0752540:CDS
TGTTCCTTATTTGTGTGGTT+TGG 0.295390 5_2:+6266728 Msa0752540:CDS
GGATAATTCAGTTGAGCTTC+TGG 0.309776 5_2:-6266819 None:intergenic
TGCCGCCACCACCTGCAAAA+TGG 0.312039 5_2:+6265371 Msa0752540:CDS
TGAAGAGACATGGCCTCTTC+TGG 0.313100 5_2:-6265157 None:intergenic
TCCTTCTTTCTCTATTCTGT+TGG 0.316195 5_2:+6266839 Msa0752540:CDS
GTTCCTTATTTGTGTGGTTT+GGG 0.319903 5_2:+6266729 Msa0752540:CDS
TATGCAGGCTCATTTGGATT+TGG 0.325974 5_2:+6265988 Msa0752540:CDS
CCTCGGCGGGATCCCTATAC+TGG 0.329513 5_2:+6266599 Msa0752540:CDS
CTTGAAGTACCTTTGGCTTT+GGG 0.329870 5_2:+6266933 Msa0752540:CDS
CGCTCAGGGTTCTCTCACTT+GGG 0.331898 5_2:+6267064 Msa0752540:CDS
TCGCTCAGGGTTCTCTCACT+TGG 0.332754 5_2:+6267063 Msa0752540:CDS
TGTAATGAAAGTGTCCTTTC+AGG 0.333163 5_2:-6265208 None:intergenic
TAAGAATTCCCGGACTTTCT+TGG 0.338489 5_2:-6266368 None:intergenic
AATCAGTCTTTGTGTCTTCC+AGG 0.338756 5_2:+6266024 Msa0752540:CDS
TTCAGCGCATTGAATGTTAT+CGG 0.350080 5_2:-6265629 None:intergenic
TACATTGCTAAGTGAGCATT+AGG 0.357002 5_2:-6265595 None:intergenic
TAACCCAAACCACACAAATA+AGG 0.363721 5_2:-6266732 None:intergenic
AATCAGAAGATTTGCATAGT+TGG 0.366643 5_2:+6265041 Msa0752540:CDS
ATAGCGGCTGGCGACCAATC+AGG 0.369574 5_2:-6266540 None:intergenic
GCAAAAGCACCAATTGCAAT+TGG 0.372818 5_2:-6265748 None:intergenic
AGTTGAACTTGAAGTACCTT+TGG 0.373834 5_2:+6266926 Msa0752540:CDS
ACTTGAAGTACCTTTGGCTT+TGG 0.383368 5_2:+6266932 Msa0752540:CDS
ATGTCTGGTTTAAGAATTCC+CGG 0.398892 5_2:-6266378 None:intergenic
AGGACCAAGCCAAGAAAGTC+CGG 0.402006 5_2:+6266359 Msa0752540:CDS
ACTCACAGTCCAACTTTCTT+GGG 0.407161 5_2:+6265235 Msa0752540:CDS
AATTGTTCAGAAAAGTCTTT+CGG 0.408367 5_2:-6265952 None:intergenic
ACCAGAACTTTGACTAATGT+TGG 0.409655 5_2:+6266882 Msa0752540:CDS
TCAAAAGTTCTCACCCTGAT+TGG 0.411956 5_2:+6266526 Msa0752540:CDS
CCCAACATTAGTCAAAGTTC+TGG 0.412171 5_2:-6266883 None:intergenic
GGACAAGAAGTTCTAAATTC+AGG 0.414650 5_2:+6266123 Msa0752540:CDS
TGAAGCAAGGGCAAGGGTTG+TGG 0.418304 5_2:+6265260 Msa0752540:CDS
TCAATGTTCTTTAAGGATCC+TGG 0.421213 5_2:-6266042 None:intergenic
ACAAAGACTGATTCTGTGTC+TGG 0.421506 5_2:-6266014 None:intergenic
CAATGTTGCTGATGGATTGT+AGG 0.425691 5_2:-6266274 None:intergenic
ATTCCCGGACTTTCTTGGCT+TGG 0.425710 5_2:-6266363 None:intergenic
AAGGATCCAAGGAGCTTCAT+TGG 0.426872 5_2:-6265839 None:intergenic
GCATCAGCAAAGCTAGGAAA+TGG 0.429332 5_2:+6265898 Msa0752540:CDS
ATTCTTAAACCAGACATCAT+TGG 0.434865 5_2:+6266384 Msa0752540:CDS
TCTTACCGCCATGTAGCCTC+TGG 0.437407 5_2:+6265115 Msa0752540:CDS
TTTGAAGACCCAATTGCAAT+TGG 0.438577 5_2:+6265739 Msa0752540:CDS
TCGTTGAATGATGGATGATA+AGG 0.440505 5_2:-6265340 None:intergenic
TGCTTCAGACCCAAGAAAGT+TGG 0.445653 5_2:-6265244 None:intergenic
AAAAGCCTTTGATCCAGTAT+AGG 0.446877 5_2:-6266612 None:intergenic
AAAGCCTTTGATCCAGTATA+GGG 0.451944 5_2:-6266611 None:intergenic
AAGGAATCAAACTTTCGCTC+AGG 0.453044 5_2:+6267049 Msa0752540:CDS
GCAATTGGGTCTTCAAAGAA+TGG 0.453919 5_2:-6265733 None:intergenic
TGACAGCTGCATAGTGTAGT+TGG 0.454099 5_2:-6264876 None:intergenic
CCAGAACTTTGACTAATGTT+GGG 0.456402 5_2:+6266883 Msa0752540:CDS
TTGAATAACAATGTTGCTGA+TGG 0.457510 5_2:-6266282 None:intergenic
AAAGTAGTGGTGTGTGATGT+TGG 0.463897 5_2:+6266075 Msa0752540:CDS
CTCTCTCCAATGAAGCTCCT+TGG 0.469621 5_2:+6265833 Msa0752540:CDS
ATTTCCTCACAAGGACAGAA+TGG 0.476874 5_2:+6265087 Msa0752540:CDS
TTGAATATCATAAACAAGAC+CGG 0.483041 5_2:-6266694 None:intergenic
AGTTGCTCTGCTGCAAACTC+TGG 0.483255 5_2:+6265796 Msa0752540:CDS
CGTTGAATGATGGATGATAA+GGG 0.484847 5_2:-6265339 None:intergenic
CTTCTTTCTCTATTCTGTTG+GGG 0.489382 5_2:+6266841 Msa0752540:CDS
ACACCTGGACCAATGATGTC+TGG 0.493455 5_2:-6266393 None:intergenic
CAAAAGCACCAATTGCAATT+GGG 0.494429 5_2:-6265747 None:intergenic
CTGCAAATCCAGAGGCTACA+TGG 0.494461 5_2:-6265123 None:intergenic
CTTGCAAATTCAGAAACACT+TGG 0.495544 5_2:+6266162 Msa0752540:CDS
TGTCAACATTCTAGCTGCAT+GGG 0.495734 5_2:+6266413 Msa0752540:CDS
CAAGTGTTTCTGAATTTGCA+AGG 0.496447 5_2:-6266161 None:intergenic
TTGGAGAGAGTGCTGTATCC+AGG 0.503269 5_2:-6265820 None:intergenic
ATGCAAATCTTCTGATTGAA+AGG 0.503608 5_2:-6265035 None:intergenic
CATCCATCATTCAACGATGA+AGG 0.504008 5_2:+6265346 Msa0752540:CDS
TCAGTGAATGTTATTTCACT+TGG 0.504064 5_2:-6266969 None:intergenic
CCGGAAACAATGTTAAAAGC+TGG 0.504347 5_2:-6266459 None:intergenic
TGGTTTCAGCACTTCTGCTA+CGG 0.505784 5_2:+6266182 Msa0752540:CDS
TGTCTGATAAACATGTTGTT+AGG 0.511735 5_2:+6267087 Msa0752540:CDS
TTGGGTCTGAAGCAAGGGCA+AGG 0.512292 5_2:+6265253 Msa0752540:CDS
ATCAATTGTGCTGGCACCAA+CGG 0.512655 5_2:-6265863 None:intergenic
CTTTCTTGGGTCTGAAGCAA+GGG 0.513397 5_2:+6265248 Msa0752540:CDS
GTTCAGAAAAGTCTTTCGGT+TGG 0.514769 5_2:-6265948 None:intergenic
ACTTTCTTGGGTCTGAAGCA+AGG 0.515460 5_2:+6265247 Msa0752540:CDS
GATGTTCTATCCCTTTCACT+TGG 0.516045 5_2:+6265697 Msa0752540:CDS
ATCTTTCTCTTGAAGAGACA+TGG 0.517045 5_2:-6265167 None:intergenic
GTGTCAACATTCTAGCTGCA+TGG 0.517651 5_2:+6266412 Msa0752540:CDS
CAAATACTCTCAACCTCGGC+GGG 0.518464 5_2:+6266586 Msa0752540:CDS
CAGCAGCAGTGTGTGTTCCA+TGG 0.520277 5_2:-6265501 None:intergenic
ATTCCTTCATCGTTGAATGA+TGG 0.520909 5_2:-6265349 None:intergenic
TTATTGCCACTTGTATATGC+AGG 0.520967 5_2:+6265973 Msa0752540:CDS
CACACTGCTGCTGAGGCTGC+AGG 0.522441 5_2:+6265511 Msa0752540:CDS
TCTGCTGCAAACTCTGGTCC+TGG 0.523412 5_2:+6265802 Msa0752540:CDS
GAGAACCTAAACCAAGTGAA+AGG 0.523752 5_2:-6265708 None:intergenic
AAAGGCCATTGCGAATTCAC+TGG 0.527872 5_2:+6265394 Msa0752540:CDS
TACATCAGTATTTGCTGCAG+AGG 0.530978 5_2:+6264943 Msa0752540:CDS
AAATAAGGAACATAATCTTC+AGG 0.532280 5_2:-6266717 None:intergenic
GATTATGTTCCTTATTTGTG+TGG 0.533035 5_2:+6266723 Msa0752540:CDS
GTGAGCATTAGGTGCCATAC+CGG 0.534767 5_2:-6265584 None:intergenic
GGAAATGGAAATGAATATGA+AGG 0.535360 5_2:+6265913 Msa0752540:CDS
AATGATGATAACCTTGGAAA+AGG 0.537148 5_2:+6265283 Msa0752540:CDS
TCAGCAACATTGTTATTCAA+AGG 0.538852 5_2:+6266285 Msa0752540:CDS
TTGTGCTGGCACCAACGGTA+AGG 0.544386 5_2:-6265858 None:intergenic
AGAACCTAAACCAAGTGAAA+GGG 0.551042 5_2:-6265707 None:intergenic
AGGAATCAAACTTTCGCTCA+GGG 0.551286 5_2:+6267050 Msa0752540:CDS
AAACCAGACATCATTGGTCC+AGG 0.552481 5_2:+6266390 Msa0752540:CDS
TAGCGGCTGGCGACCAATCA+GGG 0.554928 5_2:-6266539 None:intergenic
ATTGTAGCATCAGCAAAGCT+AGG 0.558116 5_2:+6265892 Msa0752540:CDS
TGGGTCTGAAGCAAGGGCAA+GGG 0.558985 5_2:+6265254 Msa0752540:CDS
CCCAACAGAATAGAGAAAGA+AGG 0.560563 5_2:-6266840 None:intergenic
GAAGAAAAGTAAACAACAGA+AGG 0.566636 5_2:-6266333 None:intergenic
AAGTTCTATCTTAGCTGCAA+TGG 0.566976 5_2:+6265651 Msa0752540:CDS
TAAAGGTGTAGCAGCCGGTA+TGG 0.567524 5_2:+6265570 Msa0752540:CDS
AGGACAAGACATTGAAGTAC+CGG 0.567678 5_2:-6266478 None:intergenic
ATGTCTTGTCCTCACCTAAG+TGG 0.567792 5_2:+6266489 Msa0752540:CDS
ATGGATATTGCTATTGAAGA+TGG 0.574799 5_2:+6265670 Msa0752540:CDS
AGATTGAAGTTATTGTTCAG+TGG 0.577992 5_2:+6266766 Msa0752540:CDS
CCACCACCTGCAAAATGGAA+AGG 0.578029 5_2:+6265376 Msa0752540:CDS
TGGAACACACACTGCTGCTG+AGG 0.580264 5_2:+6265504 Msa0752540:CDS
CCTGTTAAAGCAAATGATCC+CGG 0.580345 5_2:+6266675 Msa0752540:CDS
GGACCAAGCCAAGAAAGTCC+GGG 0.581334 5_2:+6266360 Msa0752540:CDS
GCACCAACGGTAAGGATCCA+AGG 0.581358 5_2:-6265850 None:intergenic
CACAAATAAAGGAAAACAGA+AGG 0.583247 5_2:+6267030 Msa0752540:CDS
CGTGTTTCAACCATTGTGAA+AGG 0.583936 5_2:+6266102 Msa0752540:CDS
ATATGCAATAATAAGCTCAT+CGG 0.583974 5_2:+6265424 Msa0752540:CDS
GCTCCTTGGATCCTTACCGT+TGG 0.585586 5_2:+6265847 Msa0752540:CDS
TCCCTCCAGTGAATTCGCAA+TGG 0.587526 5_2:-6265399 None:intergenic
GTGTAACTCACTTGAACCGC+AGG 0.599809 5_2:-6266216 None:intergenic
TCAATGCAGCAATACCACTT+AGG 0.599841 5_2:-6266503 None:intergenic
GGATCCCTATACTGGATCAA+AGG 0.600812 5_2:+6266607 Msa0752540:CDS
AATGCTAAAGGTGTAGCAGC+CGG 0.601004 5_2:+6265565 Msa0752540:CDS
AACTTCTTGTCCTTTCACAA+TGG 0.606019 5_2:-6266112 None:intergenic
CCGGTAGCGAAAATATCAGC+CGG 0.608618 5_2:-6266636 None:intergenic
TTAAAGAACATTGATCTGAG+TGG 0.611550 5_2:+6266051 Msa0752540:CDS
AGGATTAACATGTCCTGCAC+CGG 0.613274 5_2:-6266655 None:intergenic
TGAATATCATAAACAAGACC+GGG 0.615921 5_2:-6266693 None:intergenic
GCAGCTAGAATGTTGACACC+TGG 0.616490 5_2:-6266408 None:intergenic
GCCATTGCGAATTCACTGGA+GGG 0.616641 5_2:+6265398 Msa0752540:CDS
ATTCACTGAGGTAAATGAGA+AGG 0.616902 5_2:+6266983 Msa0752540:CDS
AGTGAAGCTGACACCAGAAG+AGG 0.623327 5_2:+6265144 Msa0752540:CDS
AAAACCATTCTGTCCTTGTG+AGG 0.626249 5_2:-6265091 None:intergenic
AGTAAACAACAGAAGGTGCG+AGG 0.626458 5_2:-6266326 None:intergenic
GGCCATTGCGAATTCACTGG+AGG 0.628448 5_2:+6265397 Msa0752540:CDS
GCGGTTCAAGTGAGTTACAC+TGG 0.630836 5_2:+6266219 Msa0752540:CDS
AATGAGCCTGCATATACAAG+TGG 0.633747 5_2:-6265979 None:intergenic
TTGTGGAATGATGATAACCT+TGG 0.635157 5_2:+6265277 Msa0752540:CDS
ACTGCAAATACTCTCAACCT+CGG 0.640806 5_2:+6266582 Msa0752540:CDS
GTAAACAACAGAAGGTGCGA+GGG 0.648718 5_2:-6266325 None:intergenic
ACACTCATACCCAAAGCCAA+AGG 0.650995 5_2:-6266942 None:intergenic
ATAATTGGAGTCATAGACAC+AGG 0.654161 5_2:+6265310 Msa0752540:CDS
GTAGTGGTGTGTGATGTTGG+AGG 0.665089 5_2:+6266078 Msa0752540:CDS
CAGCTTCACTGCAAATCCAG+AGG 0.669476 5_2:-6265131 None:intergenic
GTCAACATTCTAGCTGCATG+GGG 0.672811 5_2:+6266414 Msa0752540:CDS
GCAAATACTCTCAACCTCGG+CGG 0.682944 5_2:+6266585 Msa0752540:CDS
TGATCTGAGTGGAAAAGTAG+TGG 0.685674 5_2:+6266062 Msa0752540:CDS
GTTCAAGTGAGTTACACTGG+TGG 0.688981 5_2:+6266222 Msa0752540:CDS
CAAGAAGTTCTAAATTCAGG+CGG 0.691762 5_2:+6266126 Msa0752540:CDS
GCAGCAATACCACTTAGGTG+AGG 0.726862 5_2:-6266498 None:intergenic
AAGTGAAATAACATTCACTG+AGG 0.755767 5_2:+6266971 Msa0752540:CDS
CAAATCCAGAGGCTACATGG+CGG 0.781016 5_2:-6265120 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGAATTTATACCACAAATAA+AGG + chr5_2:6267019-6267038 Msa0752540:CDS 20.0%
!! TGAATTTATACCACAAATAA+AGG + chr5_2:6267019-6267038 Msa0752540:CDS 20.0%
!! ATTTTTGTGGAAGAAATGAA+TGG - chr5_2:6265069-6265088 None:intergenic 25.0%
! ATATGCAATAATAAGCTCAT+CGG + chr5_2:6265424-6265443 Msa0752540:CDS 25.0%
!! AATTTTTCTATCAATTGTGC+TGG - chr5_2:6265875-6265894 None:intergenic 25.0%
! AATTGTTCAGAAAAGTCTTT+CGG - chr5_2:6265955-6265974 None:intergenic 25.0%
! TTATTCAAAGGAACAGTAAT+TGG + chr5_2:6266297-6266316 Msa0752540:CDS 25.0%
! TTGAATATCATAAACAAGAC+CGG - chr5_2:6266697-6266716 None:intergenic 25.0%
! AAATAAGGAACATAATCTTC+AGG - chr5_2:6266720-6266739 None:intergenic 25.0%
! CACTTAAAAATGACAGATAT+TGG - chr5_2:6267116-6267135 None:intergenic 25.0%
!! ATTTTTGTGGAAGAAATGAA+TGG - chr5_2:6265069-6265088 None:intergenic 25.0%
! ATATGCAATAATAAGCTCAT+CGG + chr5_2:6265424-6265443 Msa0752540:CDS 25.0%
!! AATTTTTCTATCAATTGTGC+TGG - chr5_2:6265875-6265894 None:intergenic 25.0%
! AATTGTTCAGAAAAGTCTTT+CGG - chr5_2:6265955-6265974 None:intergenic 25.0%
! TTATTCAAAGGAACAGTAAT+TGG + chr5_2:6266297-6266316 Msa0752540:CDS 25.0%
! TTGAATATCATAAACAAGAC+CGG - chr5_2:6266697-6266716 None:intergenic 25.0%
! AAATAAGGAACATAATCTTC+AGG - chr5_2:6266720-6266739 None:intergenic 25.0%
! CACTTAAAAATGACAGATAT+TGG - chr5_2:6267116-6267135 None:intergenic 25.0%
CAGCAAATACTGATGTAATT+TGG - chr5_2:6264940-6264959 None:intergenic 30.0%
ATGCAAATCTTCTGATTGAA+AGG - chr5_2:6265038-6265057 None:intergenic 30.0%
AATCAGAAGATTTGCATAGT+TGG + chr5_2:6265041-6265060 Msa0752540:CDS 30.0%
AATGATGATAACCTTGGAAA+AGG + chr5_2:6265283-6265302 Msa0752540:CDS 30.0%
!! CCATGGAAATGTTTTTCAAA+TGG - chr5_2:6265487-6265506 None:intergenic 30.0%
CCATTTGAAAAACATTTCCA+TGG + chr5_2:6265484-6265503 Msa0752540:CDS 30.0%
!!! AGTGTTTTTGGTAATGCTAA+AGG + chr5_2:6265553-6265572 Msa0752540:CDS 30.0%
! ATGGATATTGCTATTGAAGA+TGG + chr5_2:6265670-6265689 Msa0752540:CDS 30.0%
GGAAATGGAAATGAATATGA+AGG + chr5_2:6265913-6265932 Msa0752540:CDS 30.0%
ACTCAGATCAATGTTCTTTA+AGG - chr5_2:6266052-6266071 None:intergenic 30.0%
TTAAAGAACATTGATCTGAG+TGG + chr5_2:6266051-6266070 Msa0752540:CDS 30.0%
TTGAATAACAATGTTGCTGA+TGG - chr5_2:6266285-6266304 None:intergenic 30.0%
! TCAGCAACATTGTTATTCAA+AGG + chr5_2:6266285-6266304 Msa0752540:CDS 30.0%
GAAGAAAAGTAAACAACAGA+AGG - chr5_2:6266336-6266355 None:intergenic 30.0%
!! GTTGTTTACTTTTCTTCAAG+AGG + chr5_2:6266339-6266358 Msa0752540:CDS 30.0%
ATTCTTAAACCAGACATCAT+TGG + chr5_2:6266384-6266403 Msa0752540:CDS 30.0%
!!! CATGATTGCTGATTTTATAG+CGG - chr5_2:6266559-6266578 None:intergenic 30.0%
TGAATATCATAAACAAGACC+GGG - chr5_2:6266696-6266715 None:intergenic 30.0%
! GATTATGTTCCTTATTTGTG+TGG + chr5_2:6266723-6266742 Msa0752540:CDS 30.0%
AGATTGAAGTTATTGTTCAG+TGG + chr5_2:6266766-6266785 Msa0752540:CDS 30.0%
!! TCAGTGAATGTTATTTCACT+TGG - chr5_2:6266972-6266991 None:intergenic 30.0%
AAGTGAAATAACATTCACTG+AGG + chr5_2:6266971-6266990 Msa0752540:CDS 30.0%
!! CTTCTGTTTTCCTTTATTTG+TGG - chr5_2:6267032-6267051 None:intergenic 30.0%
CACAAATAAAGGAAAACAGA+AGG + chr5_2:6267030-6267049 Msa0752540:CDS 30.0%
TGTCTGATAAACATGTTGTT+AGG + chr5_2:6267087-6267106 Msa0752540:CDS 30.0%
CAGCAAATACTGATGTAATT+TGG - chr5_2:6264940-6264959 None:intergenic 30.0%
ATGCAAATCTTCTGATTGAA+AGG - chr5_2:6265038-6265057 None:intergenic 30.0%
AATCAGAAGATTTGCATAGT+TGG + chr5_2:6265041-6265060 Msa0752540:CDS 30.0%
AATGATGATAACCTTGGAAA+AGG + chr5_2:6265283-6265302 Msa0752540:CDS 30.0%
!! CCATGGAAATGTTTTTCAAA+TGG - chr5_2:6265487-6265506 None:intergenic 30.0%
CCATTTGAAAAACATTTCCA+TGG + chr5_2:6265484-6265503 Msa0752540:CDS 30.0%
!!! AGTGTTTTTGGTAATGCTAA+AGG + chr5_2:6265553-6265572 Msa0752540:CDS 30.0%
! ATGGATATTGCTATTGAAGA+TGG + chr5_2:6265670-6265689 Msa0752540:CDS 30.0%
GGAAATGGAAATGAATATGA+AGG + chr5_2:6265913-6265932 Msa0752540:CDS 30.0%
ACTCAGATCAATGTTCTTTA+AGG - chr5_2:6266052-6266071 None:intergenic 30.0%
TTAAAGAACATTGATCTGAG+TGG + chr5_2:6266051-6266070 Msa0752540:CDS 30.0%
TTGAATAACAATGTTGCTGA+TGG - chr5_2:6266285-6266304 None:intergenic 30.0%
! TCAGCAACATTGTTATTCAA+AGG + chr5_2:6266285-6266304 Msa0752540:CDS 30.0%
GAAGAAAAGTAAACAACAGA+AGG - chr5_2:6266336-6266355 None:intergenic 30.0%
!! GTTGTTTACTTTTCTTCAAG+AGG + chr5_2:6266339-6266358 Msa0752540:CDS 30.0%
ATTCTTAAACCAGACATCAT+TGG + chr5_2:6266384-6266403 Msa0752540:CDS 30.0%
!!! CATGATTGCTGATTTTATAG+CGG - chr5_2:6266559-6266578 None:intergenic 30.0%
TGAATATCATAAACAAGACC+GGG - chr5_2:6266696-6266715 None:intergenic 30.0%
! GATTATGTTCCTTATTTGTG+TGG + chr5_2:6266723-6266742 Msa0752540:CDS 30.0%
AGATTGAAGTTATTGTTCAG+TGG + chr5_2:6266766-6266785 Msa0752540:CDS 30.0%
!! TCAGTGAATGTTATTTCACT+TGG - chr5_2:6266972-6266991 None:intergenic 30.0%
AAGTGAAATAACATTCACTG+AGG + chr5_2:6266971-6266990 Msa0752540:CDS 30.0%
!! CTTCTGTTTTCCTTTATTTG+TGG - chr5_2:6267032-6267051 None:intergenic 30.0%
CACAAATAAAGGAAAACAGA+AGG + chr5_2:6267030-6267049 Msa0752540:CDS 30.0%
TGTCTGATAAACATGTTGTT+AGG + chr5_2:6267087-6267106 Msa0752540:CDS 30.0%
TCCACAAAAATTTCCTCACA+AGG + chr5_2:6265078-6265097 Msa0752540:CDS 35.0%
! TCCTTGTGAGGAAATTTTTG+TGG - chr5_2:6265082-6265101 None:intergenic 35.0%
ATCTTTCTCTTGAAGAGACA+TGG - chr5_2:6265170-6265189 None:intergenic 35.0%
! TTTTGTTAGCAAGACCTGAA+AGG + chr5_2:6265194-6265213 Msa0752540:CDS 35.0%
!! TGTAATGAAAGTGTCCTTTC+AGG - chr5_2:6265211-6265230 None:intergenic 35.0%
TTGTGGAATGATGATAACCT+TGG + chr5_2:6265277-6265296 Msa0752540:CDS 35.0%
! CAATTATGACACCTTTTCCA+AGG - chr5_2:6265297-6265316 None:intergenic 35.0%
!! CTTGGAAAAGGTGTCATAAT+TGG + chr5_2:6265295-6265314 Msa0752540:CDS 35.0%
ATAATTGGAGTCATAGACAC+AGG + chr5_2:6265310-6265329 Msa0752540:CDS 35.0%
!! CGTTGAATGATGGATGATAA+GGG - chr5_2:6265342-6265361 None:intergenic 35.0%
!! TCGTTGAATGATGGATGATA+AGG - chr5_2:6265343-6265362 None:intergenic 35.0%
ATTCCTTCATCGTTGAATGA+TGG - chr5_2:6265352-6265371 None:intergenic 35.0%
!! TGTTTTTCAAATGGAAGCTC+TGG - chr5_2:6265478-6265497 None:intergenic 35.0%
! GTAGAAGATGCAAGTGTTTT+TGG + chr5_2:6265541-6265560 Msa0752540:CDS 35.0%
TACATTGCTAAGTGAGCATT+AGG - chr5_2:6265598-6265617 None:intergenic 35.0%
TTCAGCGCATTGAATGTTAT+CGG - chr5_2:6265632-6265651 None:intergenic 35.0%
AAGTTCTATCTTAGCTGCAA+TGG + chr5_2:6265651-6265670 Msa0752540:CDS 35.0%
AGAACCTAAACCAAGTGAAA+GGG - chr5_2:6265710-6265729 None:intergenic 35.0%
TTTGAAGACCCAATTGCAAT+TGG + chr5_2:6265739-6265758 Msa0752540:CDS 35.0%
!! CAAAAGCACCAATTGCAATT+GGG - chr5_2:6265750-6265769 None:intergenic 35.0%
! TTATTGCCACTTGTATATGC+AGG + chr5_2:6265973-6265992 Msa0752540:CDS 35.0%
! TCAATGTTCTTTAAGGATCC+TGG - chr5_2:6266045-6266064 None:intergenic 35.0%
AACTTCTTGTCCTTTCACAA+TGG - chr5_2:6266115-6266134 None:intergenic 35.0%
!! GGACAAGAAGTTCTAAATTC+AGG + chr5_2:6266123-6266142 Msa0752540:CDS 35.0%
!! CAAGAAGTTCTAAATTCAGG+CGG + chr5_2:6266126-6266145 Msa0752540:CDS 35.0%
! CAAGTGTTTCTGAATTTGCA+AGG - chr5_2:6266164-6266183 None:intergenic 35.0%
CTTGCAAATTCAGAAACACT+TGG + chr5_2:6266162-6266181 Msa0752540:CDS 35.0%
! ATGTCTGGTTTAAGAATTCC+CGG - chr5_2:6266381-6266400 None:intergenic 35.0%
! CCAGCTTTTAACATTGTTTC+CGG + chr5_2:6266459-6266478 Msa0752540:CDS 35.0%
AAAGCCTTTGATCCAGTATA+GGG - chr5_2:6266614-6266633 None:intergenic 35.0%
AAAAGCCTTTGATCCAGTAT+AGG - chr5_2:6266615-6266634 None:intergenic 35.0%
! TGTTCCTTATTTGTGTGGTT+TGG + chr5_2:6266728-6266747 Msa0752540:CDS 35.0%
! GTTCCTTATTTGTGTGGTTT+GGG + chr5_2:6266729-6266748 Msa0752540:CDS 35.0%
TAACCCAAACCACACAAATA+AGG - chr5_2:6266735-6266754 None:intergenic 35.0%
TCCTTCTTTCTCTATTCTGT+TGG + chr5_2:6266839-6266858 Msa0752540:CDS 35.0%
CCTTCTTTCTCTATTCTGTT+GGG + chr5_2:6266840-6266859 Msa0752540:CDS 35.0%
CTTCTTTCTCTATTCTGTTG+GGG + chr5_2:6266841-6266860 Msa0752540:CDS 35.0%
ACCAGAACTTTGACTAATGT+TGG + chr5_2:6266882-6266901 Msa0752540:CDS 35.0%
CCAGAACTTTGACTAATGTT+GGG + chr5_2:6266883-6266902 Msa0752540:CDS 35.0%
! AGTTGAACTTGAAGTACCTT+TGG + chr5_2:6266926-6266945 Msa0752540:CDS 35.0%
ATTCACTGAGGTAAATGAGA+AGG + chr5_2:6266983-6267002 Msa0752540:CDS 35.0%
TCCACAAAAATTTCCTCACA+AGG + chr5_2:6265078-6265097 Msa0752540:CDS 35.0%
! TCCTTGTGAGGAAATTTTTG+TGG - chr5_2:6265082-6265101 None:intergenic 35.0%
ATCTTTCTCTTGAAGAGACA+TGG - chr5_2:6265170-6265189 None:intergenic 35.0%
! TTTTGTTAGCAAGACCTGAA+AGG + chr5_2:6265194-6265213 Msa0752540:CDS 35.0%
!! TGTAATGAAAGTGTCCTTTC+AGG - chr5_2:6265211-6265230 None:intergenic 35.0%
TTGTGGAATGATGATAACCT+TGG + chr5_2:6265277-6265296 Msa0752540:CDS 35.0%
! CAATTATGACACCTTTTCCA+AGG - chr5_2:6265297-6265316 None:intergenic 35.0%
!! CTTGGAAAAGGTGTCATAAT+TGG + chr5_2:6265295-6265314 Msa0752540:CDS 35.0%
ATAATTGGAGTCATAGACAC+AGG + chr5_2:6265310-6265329 Msa0752540:CDS 35.0%
!! CGTTGAATGATGGATGATAA+GGG - chr5_2:6265342-6265361 None:intergenic 35.0%
!! TCGTTGAATGATGGATGATA+AGG - chr5_2:6265343-6265362 None:intergenic 35.0%
ATTCCTTCATCGTTGAATGA+TGG - chr5_2:6265352-6265371 None:intergenic 35.0%
!! TGTTTTTCAAATGGAAGCTC+TGG - chr5_2:6265478-6265497 None:intergenic 35.0%
! GTAGAAGATGCAAGTGTTTT+TGG + chr5_2:6265541-6265560 Msa0752540:CDS 35.0%
TACATTGCTAAGTGAGCATT+AGG - chr5_2:6265598-6265617 None:intergenic 35.0%
TTCAGCGCATTGAATGTTAT+CGG - chr5_2:6265632-6265651 None:intergenic 35.0%
AAGTTCTATCTTAGCTGCAA+TGG + chr5_2:6265651-6265670 Msa0752540:CDS 35.0%
AGAACCTAAACCAAGTGAAA+GGG - chr5_2:6265710-6265729 None:intergenic 35.0%
TTTGAAGACCCAATTGCAAT+TGG + chr5_2:6265739-6265758 Msa0752540:CDS 35.0%
!! CAAAAGCACCAATTGCAATT+GGG - chr5_2:6265750-6265769 None:intergenic 35.0%
! TTATTGCCACTTGTATATGC+AGG + chr5_2:6265973-6265992 Msa0752540:CDS 35.0%
! TCAATGTTCTTTAAGGATCC+TGG - chr5_2:6266045-6266064 None:intergenic 35.0%
AACTTCTTGTCCTTTCACAA+TGG - chr5_2:6266115-6266134 None:intergenic 35.0%
!! GGACAAGAAGTTCTAAATTC+AGG + chr5_2:6266123-6266142 Msa0752540:CDS 35.0%
!! CAAGAAGTTCTAAATTCAGG+CGG + chr5_2:6266126-6266145 Msa0752540:CDS 35.0%
! CAAGTGTTTCTGAATTTGCA+AGG - chr5_2:6266164-6266183 None:intergenic 35.0%
CTTGCAAATTCAGAAACACT+TGG + chr5_2:6266162-6266181 Msa0752540:CDS 35.0%
! ATGTCTGGTTTAAGAATTCC+CGG - chr5_2:6266381-6266400 None:intergenic 35.0%
! CCAGCTTTTAACATTGTTTC+CGG + chr5_2:6266459-6266478 Msa0752540:CDS 35.0%
AAAGCCTTTGATCCAGTATA+GGG - chr5_2:6266614-6266633 None:intergenic 35.0%
AAAAGCCTTTGATCCAGTAT+AGG - chr5_2:6266615-6266634 None:intergenic 35.0%
! TGTTCCTTATTTGTGTGGTT+TGG + chr5_2:6266728-6266747 Msa0752540:CDS 35.0%
! GTTCCTTATTTGTGTGGTTT+GGG + chr5_2:6266729-6266748 Msa0752540:CDS 35.0%
TAACCCAAACCACACAAATA+AGG - chr5_2:6266735-6266754 None:intergenic 35.0%
TCCTTCTTTCTCTATTCTGT+TGG + chr5_2:6266839-6266858 Msa0752540:CDS 35.0%
CCTTCTTTCTCTATTCTGTT+GGG + chr5_2:6266840-6266859 Msa0752540:CDS 35.0%
CTTCTTTCTCTATTCTGTTG+GGG + chr5_2:6266841-6266860 Msa0752540:CDS 35.0%
ACCAGAACTTTGACTAATGT+TGG + chr5_2:6266882-6266901 Msa0752540:CDS 35.0%
CCAGAACTTTGACTAATGTT+GGG + chr5_2:6266883-6266902 Msa0752540:CDS 35.0%
! AGTTGAACTTGAAGTACCTT+TGG + chr5_2:6266926-6266945 Msa0752540:CDS 35.0%
ATTCACTGAGGTAAATGAGA+AGG + chr5_2:6266983-6267002 Msa0752540:CDS 35.0%
! TACATCAGTATTTGCTGCAG+AGG + chr5_2:6264943-6264962 Msa0752540:CDS 40.0%
ATTTCCTCACAAGGACAGAA+TGG + chr5_2:6265087-6265106 Msa0752540:CDS 40.0%
AAAACCATTCTGTCCTTGTG+AGG - chr5_2:6265094-6265113 None:intergenic 40.0%
AACTCACAGTCCAACTTTCT+TGG + chr5_2:6265234-6265253 Msa0752540:CDS 40.0%
ACTCACAGTCCAACTTTCTT+GGG + chr5_2:6265235-6265254 Msa0752540:CDS 40.0%
CATCCATCATTCAACGATGA+AGG + chr5_2:6265346-6265365 Msa0752540:CDS 40.0%
GATGTTCTATCCCTTTCACT+TGG + chr5_2:6265697-6265716 Msa0752540:CDS 40.0%
CTATCCCTTTCACTTGGTTT+AGG + chr5_2:6265703-6265722 Msa0752540:CDS 40.0%
GAGAACCTAAACCAAGTGAA+AGG - chr5_2:6265711-6265730 None:intergenic 40.0%
GCAATTGGGTCTTCAAAGAA+TGG - chr5_2:6265736-6265755 None:intergenic 40.0%
!! GCAAAAGCACCAATTGCAAT+TGG - chr5_2:6265751-6265770 None:intergenic 40.0%
! GCTTTTGCTGCTACTCAAAA+TGG + chr5_2:6265763-6265782 Msa0752540:CDS 40.0%
ATTGTAGCATCAGCAAAGCT+AGG + chr5_2:6265892-6265911 Msa0752540:CDS 40.0%
GTTCAGAAAAGTCTTTCGGT+TGG - chr5_2:6265951-6265970 None:intergenic 40.0%
AATGAGCCTGCATATACAAG+TGG - chr5_2:6265982-6266001 None:intergenic 40.0%
CTTGTATATGCAGGCTCATT+TGG + chr5_2:6265982-6266001 Msa0752540:CDS 40.0%
TATGCAGGCTCATTTGGATT+TGG + chr5_2:6265988-6266007 Msa0752540:CDS 40.0%
! ACAAAGACTGATTCTGTGTC+TGG - chr5_2:6266017-6266036 None:intergenic 40.0%
AATCAGTCTTTGTGTCTTCC+AGG + chr5_2:6266024-6266043 Msa0752540:CDS 40.0%
TGATCTGAGTGGAAAAGTAG+TGG + chr5_2:6266062-6266081 Msa0752540:CDS 40.0%
AAAGTAGTGGTGTGTGATGT+TGG + chr5_2:6266075-6266094 Msa0752540:CDS 40.0%
CGTGTTTCAACCATTGTGAA+AGG + chr5_2:6266102-6266121 Msa0752540:CDS 40.0%
!! CAATGTTGCTGATGGATTGT+AGG - chr5_2:6266277-6266296 None:intergenic 40.0%
TAAGAATTCCCGGACTTTCT+TGG - chr5_2:6266371-6266390 None:intergenic 40.0%
! TGTCAACATTCTAGCTGCAT+GGG + chr5_2:6266413-6266432 Msa0752540:CDS 40.0%
CCGGAAACAATGTTAAAAGC+TGG - chr5_2:6266462-6266481 None:intergenic 40.0%
AGGACAAGACATTGAAGTAC+CGG - chr5_2:6266481-6266500 None:intergenic 40.0%
TCAATGCAGCAATACCACTT+AGG - chr5_2:6266506-6266525 None:intergenic 40.0%
TCAAAAGTTCTCACCCTGAT+TGG + chr5_2:6266526-6266545 Msa0752540:CDS 40.0%
!!! ATTGCTGATTTTATAGCGGC+TGG - chr5_2:6266555-6266574 None:intergenic 40.0%
ACTGCAAATACTCTCAACCT+CGG + chr5_2:6266582-6266601 Msa0752540:CDS 40.0%
CCTGTTAAAGCAAATGATCC+CGG + chr5_2:6266675-6266694 Msa0752540:CDS 40.0%
GGATAATTCAGTTGAGCTTC+TGG - chr5_2:6266822-6266841 None:intergenic 40.0%
CCCAACAGAATAGAGAAAGA+AGG - chr5_2:6266843-6266862 None:intergenic 40.0%
CCCAACATTAGTCAAAGTTC+TGG - chr5_2:6266886-6266905 None:intergenic 40.0%
! ACTTGAAGTACCTTTGGCTT+TGG + chr5_2:6266932-6266951 Msa0752540:CDS 40.0%
!! CTTGAAGTACCTTTGGCTTT+GGG + chr5_2:6266933-6266952 Msa0752540:CDS 40.0%
AAGGAATCAAACTTTCGCTC+AGG + chr5_2:6267049-6267068 Msa0752540:CDS 40.0%
AGGAATCAAACTTTCGCTCA+GGG + chr5_2:6267050-6267069 Msa0752540:CDS 40.0%
! TACATCAGTATTTGCTGCAG+AGG + chr5_2:6264943-6264962 Msa0752540:CDS 40.0%
ATTTCCTCACAAGGACAGAA+TGG + chr5_2:6265087-6265106 Msa0752540:CDS 40.0%
AAAACCATTCTGTCCTTGTG+AGG - chr5_2:6265094-6265113 None:intergenic 40.0%
AACTCACAGTCCAACTTTCT+TGG + chr5_2:6265234-6265253 Msa0752540:CDS 40.0%
ACTCACAGTCCAACTTTCTT+GGG + chr5_2:6265235-6265254 Msa0752540:CDS 40.0%
CATCCATCATTCAACGATGA+AGG + chr5_2:6265346-6265365 Msa0752540:CDS 40.0%
GATGTTCTATCCCTTTCACT+TGG + chr5_2:6265697-6265716 Msa0752540:CDS 40.0%
CTATCCCTTTCACTTGGTTT+AGG + chr5_2:6265703-6265722 Msa0752540:CDS 40.0%
GAGAACCTAAACCAAGTGAA+AGG - chr5_2:6265711-6265730 None:intergenic 40.0%
GCAATTGGGTCTTCAAAGAA+TGG - chr5_2:6265736-6265755 None:intergenic 40.0%
!! GCAAAAGCACCAATTGCAAT+TGG - chr5_2:6265751-6265770 None:intergenic 40.0%
! GCTTTTGCTGCTACTCAAAA+TGG + chr5_2:6265763-6265782 Msa0752540:CDS 40.0%
ATTGTAGCATCAGCAAAGCT+AGG + chr5_2:6265892-6265911 Msa0752540:CDS 40.0%
GTTCAGAAAAGTCTTTCGGT+TGG - chr5_2:6265951-6265970 None:intergenic 40.0%
AATGAGCCTGCATATACAAG+TGG - chr5_2:6265982-6266001 None:intergenic 40.0%
CTTGTATATGCAGGCTCATT+TGG + chr5_2:6265982-6266001 Msa0752540:CDS 40.0%
TATGCAGGCTCATTTGGATT+TGG + chr5_2:6265988-6266007 Msa0752540:CDS 40.0%
! ACAAAGACTGATTCTGTGTC+TGG - chr5_2:6266017-6266036 None:intergenic 40.0%
AATCAGTCTTTGTGTCTTCC+AGG + chr5_2:6266024-6266043 Msa0752540:CDS 40.0%
TGATCTGAGTGGAAAAGTAG+TGG + chr5_2:6266062-6266081 Msa0752540:CDS 40.0%
AAAGTAGTGGTGTGTGATGT+TGG + chr5_2:6266075-6266094 Msa0752540:CDS 40.0%
CGTGTTTCAACCATTGTGAA+AGG + chr5_2:6266102-6266121 Msa0752540:CDS 40.0%
!! CAATGTTGCTGATGGATTGT+AGG - chr5_2:6266277-6266296 None:intergenic 40.0%
TAAGAATTCCCGGACTTTCT+TGG - chr5_2:6266371-6266390 None:intergenic 40.0%
! TGTCAACATTCTAGCTGCAT+GGG + chr5_2:6266413-6266432 Msa0752540:CDS 40.0%
CCGGAAACAATGTTAAAAGC+TGG - chr5_2:6266462-6266481 None:intergenic 40.0%
AGGACAAGACATTGAAGTAC+CGG - chr5_2:6266481-6266500 None:intergenic 40.0%
TCAATGCAGCAATACCACTT+AGG - chr5_2:6266506-6266525 None:intergenic 40.0%
TCAAAAGTTCTCACCCTGAT+TGG + chr5_2:6266526-6266545 Msa0752540:CDS 40.0%
!!! ATTGCTGATTTTATAGCGGC+TGG - chr5_2:6266555-6266574 None:intergenic 40.0%
ACTGCAAATACTCTCAACCT+CGG + chr5_2:6266582-6266601 Msa0752540:CDS 40.0%
CCTGTTAAAGCAAATGATCC+CGG + chr5_2:6266675-6266694 Msa0752540:CDS 40.0%
GGATAATTCAGTTGAGCTTC+TGG - chr5_2:6266822-6266841 None:intergenic 40.0%
CCCAACAGAATAGAGAAAGA+AGG - chr5_2:6266843-6266862 None:intergenic 40.0%
CCCAACATTAGTCAAAGTTC+TGG - chr5_2:6266886-6266905 None:intergenic 40.0%
! ACTTGAAGTACCTTTGGCTT+TGG + chr5_2:6266932-6266951 Msa0752540:CDS 40.0%
!! CTTGAAGTACCTTTGGCTTT+GGG + chr5_2:6266933-6266952 Msa0752540:CDS 40.0%
AAGGAATCAAACTTTCGCTC+AGG + chr5_2:6267049-6267068 Msa0752540:CDS 40.0%
AGGAATCAAACTTTCGCTCA+GGG + chr5_2:6267050-6267069 Msa0752540:CDS 40.0%
TGACAGCTGCATAGTGTAGT+TGG - chr5_2:6264879-6264898 None:intergenic 45.0%
TGCTTCAGACCCAAGAAAGT+TGG - chr5_2:6265247-6265266 None:intergenic 45.0%
! ACTTTCTTGGGTCTGAAGCA+AGG + chr5_2:6265247-6265266 Msa0752540:CDS 45.0%
! CTTTCTTGGGTCTGAAGCAA+GGG + chr5_2:6265248-6265267 Msa0752540:CDS 45.0%
! CAATGGCCTTTCCATTTTGC+AGG - chr5_2:6265385-6265404 None:intergenic 45.0%
AAAGGCCATTGCGAATTCAC+TGG + chr5_2:6265394-6265413 Msa0752540:CDS 45.0%
! AATGCTAAAGGTGTAGCAGC+CGG + chr5_2:6265565-6265584 Msa0752540:CDS 45.0%
AAGGATCCAAGGAGCTTCAT+TGG - chr5_2:6265842-6265861 None:intergenic 45.0%
! ATCAATTGTGCTGGCACCAA+CGG - chr5_2:6265866-6265885 None:intergenic 45.0%
GCATCAGCAAAGCTAGGAAA+TGG + chr5_2:6265898-6265917 Msa0752540:CDS 45.0%
TGGTTTCAGCACTTCTGCTA+CGG + chr5_2:6266182-6266201 Msa0752540:CDS 45.0%
! TACGGCTCATGTTTTACCTG+CGG + chr5_2:6266200-6266219 Msa0752540:CDS 45.0%
GTTCAAGTGAGTTACACTGG+TGG + chr5_2:6266222-6266241 Msa0752540:CDS 45.0%
! GTAAACAACAGAAGGTGCGA+GGG - chr5_2:6266328-6266347 None:intergenic 45.0%
! AGTAAACAACAGAAGGTGCG+AGG - chr5_2:6266329-6266348 None:intergenic 45.0%
AAACCAGACATCATTGGTCC+AGG + chr5_2:6266390-6266409 Msa0752540:CDS 45.0%
! GTGTCAACATTCTAGCTGCA+TGG + chr5_2:6266412-6266431 Msa0752540:CDS 45.0%
! GTCAACATTCTAGCTGCATG+GGG + chr5_2:6266414-6266433 Msa0752540:CDS 45.0%
ATGTCTTGTCCTCACCTAAG+TGG + chr5_2:6266489-6266508 Msa0752540:CDS 45.0%
GGATCCCTATACTGGATCAA+AGG + chr5_2:6266607-6266626 Msa0752540:CDS 45.0%
! ACTGGATCAAAGGCTTTTGC+CGG + chr5_2:6266617-6266636 Msa0752540:CDS 45.0%
AGGATTAACATGTCCTGCAC+CGG - chr5_2:6266658-6266677 None:intergenic 45.0%
CCGGGATCATTTGCTTTAAC+AGG - chr5_2:6266678-6266697 None:intergenic 45.0%
ACACTCATACCCAAAGCCAA+AGG - chr5_2:6266945-6266964 None:intergenic 45.0%
TGACAGCTGCATAGTGTAGT+TGG - chr5_2:6264879-6264898 None:intergenic 45.0%
TGCTTCAGACCCAAGAAAGT+TGG - chr5_2:6265247-6265266 None:intergenic 45.0%
! ACTTTCTTGGGTCTGAAGCA+AGG + chr5_2:6265247-6265266 Msa0752540:CDS 45.0%
! CTTTCTTGGGTCTGAAGCAA+GGG + chr5_2:6265248-6265267 Msa0752540:CDS 45.0%
! CAATGGCCTTTCCATTTTGC+AGG - chr5_2:6265385-6265404 None:intergenic 45.0%
AAAGGCCATTGCGAATTCAC+TGG + chr5_2:6265394-6265413 Msa0752540:CDS 45.0%
! AATGCTAAAGGTGTAGCAGC+CGG + chr5_2:6265565-6265584 Msa0752540:CDS 45.0%
AAGGATCCAAGGAGCTTCAT+TGG - chr5_2:6265842-6265861 None:intergenic 45.0%
! ATCAATTGTGCTGGCACCAA+CGG - chr5_2:6265866-6265885 None:intergenic 45.0%
GCATCAGCAAAGCTAGGAAA+TGG + chr5_2:6265898-6265917 Msa0752540:CDS 45.0%
TGGTTTCAGCACTTCTGCTA+CGG + chr5_2:6266182-6266201 Msa0752540:CDS 45.0%
! TACGGCTCATGTTTTACCTG+CGG + chr5_2:6266200-6266219 Msa0752540:CDS 45.0%
GTTCAAGTGAGTTACACTGG+TGG + chr5_2:6266222-6266241 Msa0752540:CDS 45.0%
! GTAAACAACAGAAGGTGCGA+GGG - chr5_2:6266328-6266347 None:intergenic 45.0%
! AGTAAACAACAGAAGGTGCG+AGG - chr5_2:6266329-6266348 None:intergenic 45.0%
AAACCAGACATCATTGGTCC+AGG + chr5_2:6266390-6266409 Msa0752540:CDS 45.0%
! GTGTCAACATTCTAGCTGCA+TGG + chr5_2:6266412-6266431 Msa0752540:CDS 45.0%
! GTCAACATTCTAGCTGCATG+GGG + chr5_2:6266414-6266433 Msa0752540:CDS 45.0%
ATGTCTTGTCCTCACCTAAG+TGG + chr5_2:6266489-6266508 Msa0752540:CDS 45.0%
GGATCCCTATACTGGATCAA+AGG + chr5_2:6266607-6266626 Msa0752540:CDS 45.0%
! ACTGGATCAAAGGCTTTTGC+CGG + chr5_2:6266617-6266636 Msa0752540:CDS 45.0%
AGGATTAACATGTCCTGCAC+CGG - chr5_2:6266658-6266677 None:intergenic 45.0%
CCGGGATCATTTGCTTTAAC+AGG - chr5_2:6266678-6266697 None:intergenic 45.0%
ACACTCATACCCAAAGCCAA+AGG - chr5_2:6266945-6266964 None:intergenic 45.0%
CAAATCCAGAGGCTACATGG+CGG - chr5_2:6265123-6265142 None:intergenic 50.0%
CTGCAAATCCAGAGGCTACA+TGG - chr5_2:6265126-6265145 None:intergenic 50.0%
CAGCTTCACTGCAAATCCAG+AGG - chr5_2:6265134-6265153 None:intergenic 50.0%
AGTGAAGCTGACACCAGAAG+AGG + chr5_2:6265144-6265163 Msa0752540:CDS 50.0%
TGAAGAGACATGGCCTCTTC+TGG - chr5_2:6265160-6265179 None:intergenic 50.0%
!! TTCCATTTTGCAGGTGGTGG+CGG - chr5_2:6265376-6265395 None:intergenic 50.0%
! CCTTTCCATTTTGCAGGTGG+TGG - chr5_2:6265379-6265398 None:intergenic 50.0%
CCACCACCTGCAAAATGGAA+AGG + chr5_2:6265376-6265395 Msa0752540:CDS 50.0%
! TGGCCTTTCCATTTTGCAGG+TGG - chr5_2:6265382-6265401 None:intergenic 50.0%
GCCATTGCGAATTCACTGGA+GGG + chr5_2:6265398-6265417 Msa0752540:CDS 50.0%
TCCCTCCAGTGAATTCGCAA+TGG - chr5_2:6265402-6265421 None:intergenic 50.0%
! TAAAGGTGTAGCAGCCGGTA+TGG + chr5_2:6265570-6265589 Msa0752540:CDS 50.0%
! GTGAGCATTAGGTGCCATAC+CGG - chr5_2:6265587-6265606 None:intergenic 50.0%
AGTTGCTCTGCTGCAAACTC+TGG + chr5_2:6265796-6265815 Msa0752540:CDS 50.0%
!! TTGGAGAGAGTGCTGTATCC+AGG - chr5_2:6265823-6265842 None:intergenic 50.0%
CTCTCTCCAATGAAGCTCCT+TGG + chr5_2:6265833-6265852 Msa0752540:CDS 50.0%
GTAGTGGTGTGTGATGTTGG+AGG + chr5_2:6266078-6266097 Msa0752540:CDS 50.0%
GTGTAACTCACTTGAACCGC+AGG - chr5_2:6266219-6266238 None:intergenic 50.0%
GCGGTTCAAGTGAGTTACAC+TGG + chr5_2:6266219-6266238 Msa0752540:CDS 50.0%
AGGACCAAGCCAAGAAAGTC+CGG + chr5_2:6266359-6266378 Msa0752540:CDS 50.0%
ATTCCCGGACTTTCTTGGCT+TGG - chr5_2:6266366-6266385 None:intergenic 50.0%
ACACCTGGACCAATGATGTC+TGG - chr5_2:6266396-6266415 None:intergenic 50.0%
GCAGCTAGAATGTTGACACC+TGG - chr5_2:6266411-6266430 None:intergenic 50.0%
GCAGCAATACCACTTAGGTG+AGG - chr5_2:6266501-6266520 None:intergenic 50.0%
GCAAATACTCTCAACCTCGG+CGG + chr5_2:6266585-6266604 Msa0752540:CDS 50.0%
CAAATACTCTCAACCTCGGC+GGG + chr5_2:6266586-6266605 Msa0752540:CDS 50.0%
CCGGTAGCGAAAATATCAGC+CGG - chr5_2:6266639-6266658 None:intergenic 50.0%
! CCGGCTGATATTTTCGCTAC+CGG + chr5_2:6266636-6266655 Msa0752540:CDS 50.0%
! GATATTTTCGCTACCGGTGC+AGG + chr5_2:6266642-6266661 Msa0752540:CDS 50.0%
CAAATCCAGAGGCTACATGG+CGG - chr5_2:6265123-6265142 None:intergenic 50.0%
CTGCAAATCCAGAGGCTACA+TGG - chr5_2:6265126-6265145 None:intergenic 50.0%
CAGCTTCACTGCAAATCCAG+AGG - chr5_2:6265134-6265153 None:intergenic 50.0%
AGTGAAGCTGACACCAGAAG+AGG + chr5_2:6265144-6265163 Msa0752540:CDS 50.0%
TGAAGAGACATGGCCTCTTC+TGG - chr5_2:6265160-6265179 None:intergenic 50.0%
!! TTCCATTTTGCAGGTGGTGG+CGG - chr5_2:6265376-6265395 None:intergenic 50.0%
! CCTTTCCATTTTGCAGGTGG+TGG - chr5_2:6265379-6265398 None:intergenic 50.0%
CCACCACCTGCAAAATGGAA+AGG + chr5_2:6265376-6265395 Msa0752540:CDS 50.0%
! TGGCCTTTCCATTTTGCAGG+TGG - chr5_2:6265382-6265401 None:intergenic 50.0%
GCCATTGCGAATTCACTGGA+GGG + chr5_2:6265398-6265417 Msa0752540:CDS 50.0%
TCCCTCCAGTGAATTCGCAA+TGG - chr5_2:6265402-6265421 None:intergenic 50.0%
! TAAAGGTGTAGCAGCCGGTA+TGG + chr5_2:6265570-6265589 Msa0752540:CDS 50.0%
! GTGAGCATTAGGTGCCATAC+CGG - chr5_2:6265587-6265606 None:intergenic 50.0%
AGTTGCTCTGCTGCAAACTC+TGG + chr5_2:6265796-6265815 Msa0752540:CDS 50.0%
!! TTGGAGAGAGTGCTGTATCC+AGG - chr5_2:6265823-6265842 None:intergenic 50.0%
CTCTCTCCAATGAAGCTCCT+TGG + chr5_2:6265833-6265852 Msa0752540:CDS 50.0%
GTAGTGGTGTGTGATGTTGG+AGG + chr5_2:6266078-6266097 Msa0752540:CDS 50.0%
GTGTAACTCACTTGAACCGC+AGG - chr5_2:6266219-6266238 None:intergenic 50.0%
GCGGTTCAAGTGAGTTACAC+TGG + chr5_2:6266219-6266238 Msa0752540:CDS 50.0%
AGGACCAAGCCAAGAAAGTC+CGG + chr5_2:6266359-6266378 Msa0752540:CDS 50.0%
ATTCCCGGACTTTCTTGGCT+TGG - chr5_2:6266366-6266385 None:intergenic 50.0%
ACACCTGGACCAATGATGTC+TGG - chr5_2:6266396-6266415 None:intergenic 50.0%
GCAGCTAGAATGTTGACACC+TGG - chr5_2:6266411-6266430 None:intergenic 50.0%
GCAGCAATACCACTTAGGTG+AGG - chr5_2:6266501-6266520 None:intergenic 50.0%
GCAAATACTCTCAACCTCGG+CGG + chr5_2:6266585-6266604 Msa0752540:CDS 50.0%
CAAATACTCTCAACCTCGGC+GGG + chr5_2:6266586-6266605 Msa0752540:CDS 50.0%
CCGGTAGCGAAAATATCAGC+CGG - chr5_2:6266639-6266658 None:intergenic 50.0%
! CCGGCTGATATTTTCGCTAC+CGG + chr5_2:6266636-6266655 Msa0752540:CDS 50.0%
! GATATTTTCGCTACCGGTGC+AGG + chr5_2:6266642-6266661 Msa0752540:CDS 50.0%
TCTTACCGCCATGTAGCCTC+TGG + chr5_2:6265115-6265134 Msa0752540:CDS 55.0%
! TTGGGTCTGAAGCAAGGGCA+AGG + chr5_2:6265253-6265272 Msa0752540:CDS 55.0%
! TGGGTCTGAAGCAAGGGCAA+GGG + chr5_2:6265254-6265273 Msa0752540:CDS 55.0%
TGAAGCAAGGGCAAGGGTTG+TGG + chr5_2:6265260-6265279 Msa0752540:CDS 55.0%
GGCCATTGCGAATTCACTGG+AGG + chr5_2:6265397-6265416 Msa0752540:CDS 55.0%
CAGCAGCAGTGTGTGTTCCA+TGG - chr5_2:6265504-6265523 None:intergenic 55.0%
TGGAACACACACTGCTGCTG+AGG + chr5_2:6265504-6265523 Msa0752540:CDS 55.0%
TCTGCTGCAAACTCTGGTCC+TGG + chr5_2:6265802-6265821 Msa0752540:CDS 55.0%
GCTCCTTGGATCCTTACCGT+TGG + chr5_2:6265847-6265866 Msa0752540:CDS 55.0%
GCACCAACGGTAAGGATCCA+AGG - chr5_2:6265853-6265872 None:intergenic 55.0%
! TTGTGCTGGCACCAACGGTA+AGG - chr5_2:6265861-6265880 None:intergenic 55.0%
GGACCAAGCCAAGAAAGTCC+GGG + chr5_2:6266360-6266379 Msa0752540:CDS 55.0%
TCGCTCAGGGTTCTCTCACT+TGG + chr5_2:6267063-6267082 Msa0752540:CDS 55.0%
CGCTCAGGGTTCTCTCACTT+GGG + chr5_2:6267064-6267083 Msa0752540:CDS 55.0%
TCTTACCGCCATGTAGCCTC+TGG + chr5_2:6265115-6265134 Msa0752540:CDS 55.0%
! TTGGGTCTGAAGCAAGGGCA+AGG + chr5_2:6265253-6265272 Msa0752540:CDS 55.0%
! TGGGTCTGAAGCAAGGGCAA+GGG + chr5_2:6265254-6265273 Msa0752540:CDS 55.0%
TGAAGCAAGGGCAAGGGTTG+TGG + chr5_2:6265260-6265279 Msa0752540:CDS 55.0%
GGCCATTGCGAATTCACTGG+AGG + chr5_2:6265397-6265416 Msa0752540:CDS 55.0%
CAGCAGCAGTGTGTGTTCCA+TGG - chr5_2:6265504-6265523 None:intergenic 55.0%
TGGAACACACACTGCTGCTG+AGG + chr5_2:6265504-6265523 Msa0752540:CDS 55.0%
TCTGCTGCAAACTCTGGTCC+TGG + chr5_2:6265802-6265821 Msa0752540:CDS 55.0%
GCTCCTTGGATCCTTACCGT+TGG + chr5_2:6265847-6265866 Msa0752540:CDS 55.0%
GCACCAACGGTAAGGATCCA+AGG - chr5_2:6265853-6265872 None:intergenic 55.0%
! TTGTGCTGGCACCAACGGTA+AGG - chr5_2:6265861-6265880 None:intergenic 55.0%
GGACCAAGCCAAGAAAGTCC+GGG + chr5_2:6266360-6266379 Msa0752540:CDS 55.0%
TCGCTCAGGGTTCTCTCACT+TGG + chr5_2:6267063-6267082 Msa0752540:CDS 55.0%
CGCTCAGGGTTCTCTCACTT+GGG + chr5_2:6267064-6267083 Msa0752540:CDS 55.0%
TGCCGCCACCACCTGCAAAA+TGG + chr5_2:6265371-6265390 Msa0752540:CDS 60.0%
TAGCGGCTGGCGACCAATCA+GGG - chr5_2:6266542-6266561 None:intergenic 60.0%
ATAGCGGCTGGCGACCAATC+AGG - chr5_2:6266543-6266562 None:intergenic 60.0%
TGCCGCCACCACCTGCAAAA+TGG + chr5_2:6265371-6265390 Msa0752540:CDS 60.0%
TAGCGGCTGGCGACCAATCA+GGG - chr5_2:6266542-6266561 None:intergenic 60.0%
ATAGCGGCTGGCGACCAATC+AGG - chr5_2:6266543-6266562 None:intergenic 60.0%
CACACTGCTGCTGAGGCTGC+AGG + chr5_2:6265511-6265530 Msa0752540:CDS 65.0%
CCAGTATAGGGATCCCGCCG+AGG - chr5_2:6266602-6266621 None:intergenic 65.0%
CCTCGGCGGGATCCCTATAC+TGG + chr5_2:6266599-6266618 Msa0752540:CDS 65.0%
CACACTGCTGCTGAGGCTGC+AGG + chr5_2:6265511-6265530 Msa0752540:CDS 65.0%
CCAGTATAGGGATCCCGCCG+AGG - chr5_2:6266602-6266621 None:intergenic 65.0%
CCTCGGCGGGATCCCTATAC+TGG + chr5_2:6266599-6266618 Msa0752540:CDS 65.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 6264866 6267136 6264866 ID=Msa0752540;Name=Msa0752540
chr5_2 mRNA 6264866 6267136 6264866 ID=Msa0752540-mRNA-1;Parent=Msa0752540;Name=Msa0752540-mRNA-1;_AED=0.32;_eAED=0.32;_QI=0|-1|0|1|-1|1|1|0|756
chr5_2 exon 6264866 6267136 6264866 ID=Msa0752540-mRNA-1:exon:2648;Parent=Msa0752540-mRNA-1
chr5_2 CDS 6264866 6267136 6264866 ID=Msa0752540-mRNA-1:cds;Parent=Msa0752540-mRNA-1
Gene Sequence

>Msa0752540

ATGATGAAAACCAACTACACTATGCAGCTGTCATTGCTTTTTACTCTCATTTTCATTCTCTGCAGCTTCAACCAAATTACATCAGTATTTGCTGCAGAGGAGAATCAAGAGCATAATCACAACTTAATGACATACATTGTTCATGTCAAAAAATCAGAAAATTTTGCTTCCTTTCAATCAGAAGATTTGCATAGTTGGTACCATTCATTTCTTCCACAAAAATTTCCTCACAAGGACAGAATGGTTTTCTCTTACCGCCATGTAGCCTCTGGATTTGCAGTGAAGCTGACACCAGAAGAGGCCATGTCTCTTCAAGAGAAAGATGAAATTTTGTTAGCAAGACCTGAAAGGACACTTTCATTACACACAACTCACAGTCCAACTTTCTTGGGTCTGAAGCAAGGGCAAGGGTTGTGGAATGATGATAACCTTGGAAAAGGTGTCATAATTGGAGTCATAGACACAGGAATATACCCTTATCATCCATCATTCAACGATGAAGGAATGCCGCCACCACCTGCAAAATGGAAAGGCCATTGCGAATTCACTGGAGGGAAAATATGCAATAATAAGCTCATCGGTGCAAGAAGTTTAGTCAAAAGCACGATTCCAGAGCTTCCATTTGAAAAACATTTCCATGGAACACACACTGCTGCTGAGGCTGCAGGAAGATTCGTAGAAGATGCAAGTGTTTTTGGTAATGCTAAAGGTGTAGCAGCCGGTATGGCACCTAATGCTCACTTAGCAATGTACAAAGTTTGTACCGATAACATTCAATGCGCTGAAAGTTCTATCTTAGCTGCAATGGATATTGCTATTGAAGATGGTGTAGATGTTCTATCCCTTTCACTTGGTTTAGGTTCTCTTCCATTCTTTGAAGACCCAATTGCAATTGGTGCTTTTGCTGCTACTCAAAATGGTGTTTTTGTTAGTTGCTCTGCTGCAAACTCTGGTCCTGGATACAGCACTCTCTCCAATGAAGCTCCTTGGATCCTTACCGTTGGTGCCAGCACAATTGATAGAAAAATTGTAGCATCAGCAAAGCTAGGAAATGGAAATGAATATGAAGGTGAAACATTATTCCAACCGAAAGACTTTTCTGAACAATTATTGCCACTTGTATATGCAGGCTCATTTGGATTTGGAAACCAGACACAGAATCAGTCTTTGTGTCTTCCAGGATCCTTAAAGAACATTGATCTGAGTGGAAAAGTAGTGGTGTGTGATGTTGGAGGACGTGTTTCAACCATTGTGAAAGGACAAGAAGTTCTAAATTCAGGCGGTGTTGCTATGATCCTTGCAAATTCAGAAACACTTGGTTTCAGCACTTCTGCTACGGCTCATGTTTTACCTGCGGTTCAAGTGAGTTACACTGGTGGTTTAACAATCAAAGATTACATTAACTCAACCTACAATCCATCAGCAACATTGTTATTCAAAGGAACAGTAATTGGTGATTCCCTCGCACCTTCTGTTGTTTACTTTTCTTCAAGAGGACCAAGCCAAGAAAGTCCGGGAATTCTTAAACCAGACATCATTGGTCCAGGTGTCAACATTCTAGCTGCATGGGGTGTTTCTGTAGACAACAAAATTCCAGCTTTTAACATTGTTTCCGGTACTTCAATGTCTTGTCCTCACCTAAGTGGTATTGCTGCATTGATCAAAAGTTCTCACCCTGATTGGTCGCCAGCCGCTATAAAATCAGCAATCATGACAACTGCAAATACTCTCAACCTCGGCGGGATCCCTATACTGGATCAAAGGCTTTTGCCGGCTGATATTTTCGCTACCGGTGCAGGACATGTTAATCCTGTTAAAGCAAATGATCCCGGTCTTGTTTATGATATTCAACCTGAAGATTATGTTCCTTATTTGTGTGGTTTGGGTTATACTGATAAAGAGATTGAAGTTATTGTTCAGTGGAAAGTGAAGTGTTCTAATGTGAAAAGTATACCAGAAGCTCAACTGAATTATCCTTCTTTCTCTATTCTGTTGGGGTCTGATTCACAGTATTATACCAGAACTTTGACTAATGTTGGGTTTGCAAATTCAACATATAGAGTTGAACTTGAAGTACCTTTGGCTTTGGGTATGAGTGTTAATCCAAGTGAAATAACATTCACTGAGGTAAATGAGAAGGTTAGTTTCTCTGTTGAATTTATACCACAAATAAAGGAAAACAGAAGGAATCAAACTTTCGCTCAGGGTTCTCTCACTTGGGTGTCTGATAAACATGTTGTTAGGATACCAATATCTGTCATTTTTAAGTGA

Protein sequence

>Msa0752540

MMKTNYTMQLSLLFTLIFILCSFNQITSVFAAEENQEHNHNLMTYIVHVKKSENFASFQSEDLHSWYHSFLPQKFPHKDRMVFSYRHVASGFAVKLTPEEAMSLQEKDEILLARPERTLSLHTTHSPTFLGLKQGQGLWNDDNLGKGVIIGVIDTGIYPYHPSFNDEGMPPPPAKWKGHCEFTGGKICNNKLIGARSLVKSTIPELPFEKHFHGTHTAAEAAGRFVEDASVFGNAKGVAAGMAPNAHLAMYKVCTDNIQCAESSILAAMDIAIEDGVDVLSLSLGLGSLPFFEDPIAIGAFAATQNGVFVSCSAANSGPGYSTLSNEAPWILTVGASTIDRKIVASAKLGNGNEYEGETLFQPKDFSEQLLPLVYAGSFGFGNQTQNQSLCLPGSLKNIDLSGKVVVCDVGGRVSTIVKGQEVLNSGGVAMILANSETLGFSTSATAHVLPAVQVSYTGGLTIKDYINSTYNPSATLLFKGTVIGDSLAPSVVYFSSRGPSQESPGILKPDIIGPGVNILAAWGVSVDNKIPAFNIVSGTSMSCPHLSGIAALIKSSHPDWSPAAIKSAIMTTANTLNLGGIPILDQRLLPADIFATGAGHVNPVKANDPGLVYDIQPEDYVPYLCGLGYTDKEIEVIVQWKVKCSNVKSIPEAQLNYPSFSILLGSDSQYYTRTLTNVGFANSTYRVELEVPLALGMSVNPSEITFTEVNEKVSFSVEFIPQIKENRRNQTFAQGSLTWVSDKHVVRIPISVIFK*