Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0370280 | XP_003601132.1 | 99.495 | 396 | 2 | 0 | 1 | 396 | 1 | 396 | 0.0 | 823 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0370280 | sp|Q6NQB7|B3GT7_ARATH | 70.025 | 407 | 97 | 10 | 1 | 396 | 1 | 393 | 0.0 | 567 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0370280 | G7J459 | 99.495 | 396 | 2 | 0 | 1 | 396 | 1 | 396 | 0.0 | 823 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0061500 | Msa0370280 | 0.812331 | 4.474269e-51 | -8.615850e-47 |
| Msa0092410 | Msa0370280 | 0.808366 | 3.208450e-50 | -8.615850e-47 |
| Msa0152560 | Msa0370280 | 0.822411 | 2.403051e-53 | -8.615850e-47 |
| Msa0370280 | Msa0382370 | 0.811322 | 7.418858e-51 | -8.615850e-47 |
| Msa0370280 | Msa0417770 | 0.821277 | 4.398683e-53 | -8.615850e-47 |
| Msa0370280 | Msa0432160 | 0.814030 | 1.896018e-51 | -8.615850e-47 |
| Msa0370280 | Msa0476680 | 0.812772 | 3.583797e-51 | -8.615850e-47 |
| Msa0370280 | Msa0482180 | 0.803274 | 3.769457e-49 | -8.615850e-47 |
| Msa0370280 | Msa0521010 | 0.812398 | 4.326572e-51 | -8.615850e-47 |
| Msa0370280 | Msa0521670 | 0.800030 | 1.745021e-48 | -8.615850e-47 |
| Msa0370280 | Msa0705390 | 0.816017 | 6.867215e-52 | -8.615850e-47 |
| Msa0370280 | Msa0779260 | 0.802671 | 5.021403e-49 | -8.615850e-47 |
| Msa0370280 | Msa0809140 | 0.800444 | 1.437354e-48 | -8.615850e-47 |
| Msa0370280 | Msa1011090 | 0.802652 | 5.068339e-49 | -8.615850e-47 |
| Msa0370280 | Msa1260680 | 0.808735 | 2.676135e-50 | -8.615850e-47 |
| Msa0370280 | Msa1266330 | 0.802144 | 6.448013e-49 | -8.615850e-47 |
| Msa0370280 | Msa1307180 | 0.808772 | 2.628456e-50 | -8.615850e-47 |
| Msa0370280 | Msa1372280 | 0.809624 | 1.725679e-50 | -8.615850e-47 |
| Msa0370280 | Msa1381480 | 0.805705 | 1.173427e-49 | -8.615850e-47 |
| Msa0370280 | Msa1432130 | 0.806214 | 9.171857e-50 | -8.615850e-47 |
| Msa0310440 | Msa0370280 | 0.800532 | 1.378866e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0370280 | MtrunA17_Chr3g0115251 | 98.990 | 396 | 2 | 2 | 1 | 396 | 1 | 394 | 0.0 | 811 |
| Msa0370280 | MtrunA17_Chr4g0024631 | 63.291 | 395 | 136 | 4 | 9 | 396 | 15 | 407 | 0.0 | 524 |
| Msa0370280 | MtrunA17_Chr2g0322591 | 62.148 | 391 | 142 | 4 | 9 | 396 | 15 | 402 | 0.0 | 509 |
| Msa0370280 | MtrunA17_Chr4g0004991 | 71.181 | 288 | 83 | 0 | 109 | 396 | 7 | 294 | 4.05e-160 | 451 |
| Msa0370280 | MtrunA17_Chr4g0017871 | 73.770 | 244 | 64 | 0 | 151 | 394 | 4 | 247 | 1.51e-147 | 418 |
| Msa0370280 | MtrunA17_Chr5g0396961 | 41.389 | 360 | 167 | 8 | 19 | 374 | 23 | 342 | 3.62e-84 | 260 |
| Msa0370280 | MtrunA17_Chr3g0126221 | 38.919 | 370 | 180 | 8 | 7 | 374 | 17 | 342 | 9.21e-82 | 254 |
| Msa0370280 | MtrunA17_Chr1g0149521 | 38.671 | 331 | 179 | 5 | 16 | 345 | 29 | 336 | 4.48e-72 | 229 |
| Msa0370280 | MtrunA17_Chr8g0360581 | 36.071 | 280 | 163 | 8 | 107 | 383 | 62 | 328 | 1.48e-50 | 173 |
| Msa0370280 | MtrunA17_Chr2g0316241 | 34.752 | 282 | 167 | 7 | 103 | 381 | 53 | 320 | 2.10e-49 | 170 |
| Msa0370280 | MtrunA17_Chr4g0017861 | 39.241 | 158 | 80 | 5 | 10 | 164 | 17 | 161 | 1.09e-25 | 102 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0370280 | AT1G77810.2 | 71.859 | 398 | 96 | 8 | 1 | 396 | 1 | 384 | 0.0 | 580 |
| Msa0370280 | AT1G77810.1 | 71.322 | 401 | 96 | 9 | 1 | 396 | 1 | 387 | 0.0 | 575 |
| Msa0370280 | AT1G05170.2 | 63.038 | 395 | 137 | 4 | 9 | 396 | 15 | 407 | 0.0 | 530 |
| Msa0370280 | AT1G22015.1 | 64.541 | 392 | 136 | 3 | 3 | 394 | 5 | 393 | 0.0 | 529 |
| Msa0370280 | AT1G32930.1 | 60.859 | 396 | 145 | 3 | 5 | 396 | 10 | 399 | 0.0 | 516 |
| Msa0370280 | AT1G33430.1 | 62.595 | 393 | 134 | 6 | 1 | 388 | 1 | 385 | 6.52e-180 | 506 |
| Msa0370280 | AT2G32430.1 | 61.772 | 395 | 143 | 3 | 9 | 396 | 16 | 409 | 6.23e-179 | 504 |
| Msa0370280 | AT1G33430.2 | 61.347 | 401 | 134 | 7 | 1 | 388 | 1 | 393 | 1.07e-176 | 498 |
| Msa0370280 | AT4G26940.1 | 61.990 | 392 | 142 | 5 | 9 | 396 | 19 | 407 | 4.42e-176 | 497 |
| Msa0370280 | AT1G11730.1 | 59.948 | 387 | 133 | 7 | 9 | 394 | 17 | 382 | 5.09e-163 | 462 |
| Msa0370280 | AT1G05170.1 | 60.983 | 346 | 126 | 4 | 9 | 347 | 15 | 358 | 2.22e-155 | 442 |
| Msa0370280 | AT1G33430.3 | 59.177 | 316 | 116 | 6 | 1 | 311 | 1 | 308 | 1.84e-125 | 364 |
| Msa0370280 | AT4G26940.2 | 55.472 | 265 | 112 | 4 | 9 | 269 | 19 | 281 | 1.54e-91 | 278 |
| Msa0370280 | AT5G53340.2 | 42.953 | 298 | 160 | 5 | 48 | 343 | 37 | 326 | 2.55e-80 | 250 |
| Msa0370280 | AT5G53340.1 | 42.038 | 314 | 165 | 7 | 48 | 359 | 37 | 335 | 2.57e-80 | 250 |
| Msa0370280 | AT2G25300.2 | 45.560 | 259 | 132 | 4 | 88 | 345 | 8 | 258 | 7.94e-73 | 229 |
| Msa0370280 | AT2G25300.1 | 40.240 | 333 | 169 | 9 | 16 | 345 | 31 | 336 | 3.01e-72 | 230 |
| Msa0370280 | AT4G32120.1 | 44.788 | 259 | 134 | 4 | 88 | 345 | 85 | 335 | 6.66e-71 | 226 |
| Msa0370280 | AT1G53290.1 | 35.273 | 275 | 161 | 7 | 112 | 383 | 71 | 331 | 5.34e-50 | 172 |
| Msa0370280 | AT3G14960.1 | 35.472 | 265 | 154 | 7 | 120 | 381 | 77 | 327 | 1.07e-48 | 169 |
| Msa0370280 | AT2G26100.1 | 36.502 | 263 | 148 | 8 | 123 | 381 | 106 | 353 | 4.86e-48 | 167 |
| Msa0370280 | AT2G26100.2 | 37.712 | 236 | 135 | 6 | 123 | 355 | 106 | 332 | 3.37e-45 | 160 |
Find 113 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGAAGTTGTTATAGATAT+TGG | 0.183618 | 3_1:+67896739 | None:intergenic |
| TTCGCATATTTGTGTAAAAT+TGG | 0.192644 | 3_1:+67893905 | None:intergenic |
| AATCCATTTAGCAGAGATTT+TGG | 0.243247 | 3_1:+67896649 | None:intergenic |
| GACGATGTTCATGTCAATTT+AGG | 0.248599 | 3_1:-67894734 | Msa0370280:intron |
| AACATATACGTACTGGTTAA+TGG | 0.250748 | 3_1:+67894239 | None:intergenic |
| TATAAACGCCTTCTTCTTCT+TGG | 0.252799 | 3_1:+67895908 | None:intergenic |
| ATTATCACACCATTTGATTC+AGG | 0.274906 | 3_1:+67896386 | None:intergenic |
| CTACCAAAATCTCTGCTAAA+TGG | 0.276262 | 3_1:-67896652 | Msa0370280:CDS |
| TGCTAGTAGAATATTTATTT+AGG | 0.285949 | 3_1:-67893284 | Msa0370280:three_prime_UTR |
| CAAAAGAATGAATTAGTCTA+TGG | 0.320121 | 3_1:+67896779 | None:intergenic |
| GGAAGCACCTTCACTGGAAT+TGG | 0.335761 | 3_1:+67895929 | None:intergenic |
| TATGCGTTGCGTCGTTTGAT+TGG | 0.338393 | 3_1:-67893634 | Msa0370280:CDS |
| TTCTACTGCAGTTGGATTGT+GGG | 0.352904 | 3_1:-67894783 | Msa0370280:CDS |
| TCACTTGGTTCATGGTTCAT+TGG | 0.354905 | 3_1:-67893872 | Msa0370280:CDS |
| AACAACCATGCTACCTTGGC+TGG | 0.359668 | 3_1:+67893103 | None:intergenic |
| CAATTCATTCATGTCATCCT+TGG | 0.361349 | 3_1:+67896170 | None:intergenic |
| AAATACTTCCGACACGCAAC+CGG | 0.363576 | 3_1:-67894303 | Msa0370280:CDS |
| ATATGCAATCTCTAAGGATT+TGG | 0.368185 | 3_1:-67894274 | Msa0370280:CDS |
| AGTACCATGAACCTGAGTTT+TGG | 0.369686 | 3_1:-67894347 | Msa0370280:CDS |
| AAGACGTTTCACTTGGTTCA+TGG | 0.370236 | 3_1:-67893880 | Msa0370280:CDS |
| GAGGATTTGAGCATGGGGTG+GGG | 0.371804 | 3_1:-67893331 | Msa0370280:three_prime_UTR |
| AGGATTTGAGCATGGGGTGG+GGG | 0.377217 | 3_1:-67893330 | Msa0370280:three_prime_UTR |
| TTCTCAAATCCGAAATGTTC+CGG | 0.383366 | 3_1:+67893447 | None:intergenic |
| AACATCAGTTTGATCTGATT+CGG | 0.385925 | 3_1:-67893136 | Msa0370280:three_prime_UTR |
| TTGTGATGAGCATGCCAATA+AGG | 0.386549 | 3_1:+67896603 | None:intergenic |
| CTTCTTGGAAGCACCTTCAC+TGG | 0.386928 | 3_1:+67895923 | None:intergenic |
| TTGTTATCAGATTCATGATT+GGG | 0.391646 | 3_1:-67895585 | Msa0370280:CDS |
| TACATTGGGTGTATGAAATC+TGG | 0.398028 | 3_1:-67894537 | Msa0370280:CDS |
| TGTTATAGATATTGGAACTT+TGG | 0.399459 | 3_1:+67896747 | None:intergenic |
| TTTGTTGCTCTTAGGTGTCT+TGG | 0.401003 | 3_1:-67894598 | Msa0370280:intron |
| TGGAGGATTTGAGCATGGGG+TGG | 0.417781 | 3_1:-67893333 | Msa0370280:three_prime_UTR |
| GCAGATATATGCAATCTCTA+AGG | 0.418280 | 3_1:-67894280 | Msa0370280:CDS |
| AGGTGAACAACTTCTTCAAT+TGG | 0.419854 | 3_1:-67895623 | Msa0370280:CDS |
| GCAAGTTTCCATGTTGCAAA+TGG | 0.421353 | 3_1:-67896003 | Msa0370280:CDS |
| AATTCATTCATGTCATCCTT+GGG | 0.428243 | 3_1:+67896171 | None:intergenic |
| TTTCTACTGCAGTTGGATTG+TGG | 0.431295 | 3_1:-67894784 | Msa0370280:CDS |
| AAGAAGGCGTTTATAGTGAT+AGG | 0.439791 | 3_1:-67895900 | Msa0370280:CDS |
| ACTTCCAAAACTCAGGTTCA+TGG | 0.442847 | 3_1:+67894343 | None:intergenic |
| TTGTGAGTTAGATGAAGAAT+TGG | 0.445177 | 3_1:+67896708 | None:intergenic |
| AAATTGCAGCCGGAACATTT+CGG | 0.450970 | 3_1:-67893456 | Msa0370280:three_prime_UTR |
| TCTCGTGAAAAGAACTCAAC+TGG | 0.458413 | 3_1:-67895960 | Msa0370280:CDS |
| CTTCAATTGGAACGGGAGAA+AGG | 0.459349 | 3_1:-67895610 | Msa0370280:CDS |
| ATTGTTATCAGATTCATGAT+TGG | 0.460329 | 3_1:-67895586 | Msa0370280:CDS |
| ACATGGAAACTTGCTTGTCT+AGG | 0.473506 | 3_1:+67896012 | None:intergenic |
| ACAACTTCTTCAATTGGAAC+GGG | 0.474792 | 3_1:-67895617 | Msa0370280:CDS |
| TATAGATATTGGAACTTTGG+TGG | 0.475423 | 3_1:+67896750 | None:intergenic |
| GTGAAGGAGATGGAGCTGTT+TGG | 0.475424 | 3_1:-67893553 | Msa0370280:CDS |
| GGAGGATTTGAGCATGGGGT+GGG | 0.475485 | 3_1:-67893332 | Msa0370280:three_prime_UTR |
| TAAACACAGCTTTCAGTAGC+AGG | 0.475599 | 3_1:-67895875 | Msa0370280:CDS |
| ATAGATATTGGAACTTTGGT+GGG | 0.483350 | 3_1:+67896751 | None:intergenic |
| ATCTTATAGCAACATGTTGA+AGG | 0.484740 | 3_1:-67894842 | Msa0370280:intron |
| ACTTACTTTCGAGATAAAAC+AGG | 0.497626 | 3_1:+67894513 | None:intergenic |
| AGCACGATCTAGAATGCTGT+TGG | 0.503006 | 3_1:+67894992 | None:intergenic |
| GAGATTCAGTTAGAGAAACT+TGG | 0.507141 | 3_1:-67895845 | Msa0370280:CDS |
| ATGTGCTGTGGAACCCCTCC+AGG | 0.515746 | 3_1:-67893818 | Msa0370280:intron |
| GGGAAGCTTAGAGGCAAGGC+TGG | 0.516191 | 3_1:-67893383 | Msa0370280:three_prime_UTR |
| CAAAACCCAGGGTCTACATT+GGG | 0.517449 | 3_1:-67894551 | Msa0370280:CDS |
| TCTCCAAACTTCCAAAACTC+AGG | 0.522925 | 3_1:+67894336 | None:intergenic |
| CATGGAAACTTGCTTGTCTA+GGG | 0.524248 | 3_1:+67896013 | None:intergenic |
| AACAACTTCTTCAATTGGAA+CGG | 0.527310 | 3_1:-67895618 | Msa0370280:CDS |
| CCCGTCATCGTTCAAAACCC+AGG | 0.528161 | 3_1:-67894563 | Msa0370280:CDS |
| GCGAATGAAGACGTTTCACT+TGG | 0.528259 | 3_1:-67893887 | Msa0370280:CDS |
| ATATGTATAATTAGCTATAG+AGG | 0.532713 | 3_1:-67893307 | Msa0370280:three_prime_UTR |
| TATGCTTAACGAATAATACT+AGG | 0.533520 | 3_1:-67893037 | Msa0370280:three_prime_UTR |
| TCAAAATGTGGTGAAGGAGA+TGG | 0.536110 | 3_1:-67893563 | Msa0370280:CDS |
| TAGCAACAACCATGCTACCT+TGG | 0.536229 | 3_1:+67893099 | None:intergenic |
| TGCTAATTCCATTTGCAACA+TGG | 0.541094 | 3_1:+67895995 | None:intergenic |
| AGCACCTTCACTGGAATTGG+TGG | 0.541646 | 3_1:+67895932 | None:intergenic |
| CTACTTGTTTAAATTGCAGC+CGG | 0.548236 | 3_1:-67893466 | Msa0370280:three_prime_UTR |
| TTGTGGGAAGCTTAGAGGCA+AGG | 0.553054 | 3_1:-67893387 | Msa0370280:three_prime_UTR |
| TCAAAACCCAGGGTCTACAT+TGG | 0.553999 | 3_1:-67894552 | Msa0370280:CDS |
| TCAGATTCATGATTGGGCAC+AGG | 0.555114 | 3_1:-67895579 | Msa0370280:intron |
| CATACACCCAATGTAGACCC+TGG | 0.557481 | 3_1:+67894545 | None:intergenic |
| GGATTGTGATGTGACCAAAA+AGG | 0.561138 | 3_1:-67896318 | Msa0370280:intron |
| ATACACCCAATGTAGACCCT+GGG | 0.565448 | 3_1:+67894546 | None:intergenic |
| ACACAAAGACTTCCTTCGCC+TGG | 0.566057 | 3_1:-67894949 | Msa0370280:intron |
| TGAAAAGAACTCAACTGGCT+CGG | 0.569102 | 3_1:-67895955 | Msa0370280:CDS |
| CGGACTCAGTTGCCCAGCCA+AGG | 0.569648 | 3_1:-67893116 | Msa0370280:three_prime_UTR |
| TCGTTTGATTGGAGCTGCAG+TGG | 0.574832 | 3_1:-67893623 | Msa0370280:CDS |
| TCGGCCACCAATTCCAGTGA+AGG | 0.575721 | 3_1:-67895936 | Msa0370280:CDS |
| CTTCAAGTATATACCTGGAG+GGG | 0.576115 | 3_1:+67893805 | None:intergenic |
| TGGGAGCAACCTGAATCAAA+TGG | 0.578936 | 3_1:-67896395 | Msa0370280:CDS |
| AGAGATTGCATATATCTGCC+CGG | 0.580156 | 3_1:+67894284 | None:intergenic |
| AGATAAGACTTGCATAAATG+TGG | 0.580504 | 3_1:-67893353 | Msa0370280:three_prime_UTR |
| AAATGTGGAGGATTTGAGCA+TGG | 0.583157 | 3_1:-67893338 | Msa0370280:three_prime_UTR |
| GTTGCCCAGCCAAGGTAGCA+TGG | 0.587211 | 3_1:-67893108 | Msa0370280:three_prime_UTR |
| TTTAGATTTATATCCAAAGG+AGG | 0.588798 | 3_1:-67893520 | Msa0370280:exon |
| TGTGAGTGGAAGGCACAGGC+AGG | 0.591576 | 3_1:-67893662 | Msa0370280:CDS |
| TGATCTGCCTTACCAGGCGA+AGG | 0.594114 | 3_1:+67894937 | None:intergenic |
| CAGTGGAATCTGCAAGTCAG+TGG | 0.594378 | 3_1:-67893606 | Msa0370280:CDS |
| AATACTTCCGACACGCAACC+GGG | 0.596160 | 3_1:-67894302 | Msa0370280:CDS |
| ACAACCATGCTACCTTGGCT+GGG | 0.597036 | 3_1:+67893104 | None:intergenic |
| AAATGGAATTAGCAGCAGCT+AGG | 0.599100 | 3_1:-67895986 | Msa0370280:CDS |
| TTGGCATGCTCATCACAACT+AGG | 0.601087 | 3_1:-67896598 | Msa0370280:intron |
| GCTTCAAGTATATACCTGGA+GGG | 0.604128 | 3_1:+67893804 | None:intergenic |
| CCGTCATCGTTCAAAACCCA+GGG | 0.605180 | 3_1:-67894562 | Msa0370280:CDS |
| AGAGAAACTTGGATGCCTCA+AGG | 0.605462 | 3_1:-67895834 | Msa0370280:intron |
| GATGAGCATGCCAATAAGGA+AGG | 0.608946 | 3_1:+67896607 | None:intergenic |
| ATATCTGCCCGGTTGCGTGT+CGG | 0.614366 | 3_1:+67894295 | None:intergenic |
| ATGTGGAGGATTTGAGCATG+GGG | 0.616038 | 3_1:-67893336 | Msa0370280:three_prime_UTR |
| AATGTGGAGGATTTGAGCAT+GGG | 0.616522 | 3_1:-67893337 | Msa0370280:three_prime_UTR |
| AGGTGCTTCCAAGAAGAAGA+AGG | 0.624772 | 3_1:-67895916 | Msa0370280:CDS |
| TTGTGCAGACTGTGAGTGGA+AGG | 0.630863 | 3_1:-67893672 | Msa0370280:intron |
| AGACTGTGAGTGGAAGGCAC+AGG | 0.631807 | 3_1:-67893666 | Msa0370280:CDS |
| GTGCACTCAAAATGTGGTGA+AGG | 0.632410 | 3_1:-67893569 | Msa0370280:CDS |
| AAATATGTGCACTCAAAATG+TGG | 0.634913 | 3_1:-67893575 | Msa0370280:CDS |
| TAAGACTTGCATAAATGTGG+AGG | 0.635520 | 3_1:-67893350 | Msa0370280:three_prime_UTR |
| AATGTTGTGCAGACTGTGAG+TGG | 0.643243 | 3_1:-67893676 | Msa0370280:intron |
| ACAGAAGCAGGAAAAGCCCA+AGG | 0.655089 | 3_1:-67896187 | Msa0370280:intron |
| AGAAGCACGAGTCTTCATGT+TGG | 0.672436 | 3_1:+67896673 | None:intergenic |
| GATGACCGCAGTATGTGCTG+TGG | 0.707092 | 3_1:-67893830 | Msa0370280:CDS |
| AGAACTTCAAGTGATCTCTG+AGG | 0.721031 | 3_1:-67896339 | Msa0370280:CDS |
| GGGTTCCACAGCACATACTG+CGG | 0.739920 | 3_1:+67893825 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTTTTTTTTTTTTTTTTTTG+TGG | - | chr3_1:67893473-67893492 | Msa0370280:three_prime_UTR | 10.0% |
| !!! | TAATCATCTTTAAATTTTTT+AGG | + | chr3_1:67896149-67896168 | None:intergenic | 10.0% |
| !!! | ATTTTTTATCCCTATTTTTA+AGG | - | chr3_1:67894197-67894216 | Msa0370280:intron | 15.0% |
| !!! | TTTTTTATCCCTATTTTTAA+GGG | - | chr3_1:67894198-67894217 | Msa0370280:intron | 15.0% |
| !!! | TAATATAGTCTATATGATTT+TGG | - | chr3_1:67894354-67894373 | Msa0370280:CDS | 15.0% |
| !!! | AAAAAATATGTTCTTGTTTT+GGG | - | chr3_1:67894540-67894559 | Msa0370280:CDS | 15.0% |
| !! | TAAGAAAGAATATTATATGT+CGG | + | chr3_1:67895941-67895960 | None:intergenic | 15.0% |
| !! | AAAAATTACAAATTTCATTG+AGG | - | chr3_1:67895963-67895982 | Msa0370280:CDS | 15.0% |
| !!! | TATTTTAGATTTATATCCAA+AGG | - | chr3_1:67896387-67896406 | Msa0370280:CDS | 15.0% |
| !! | TTGATGAAAAAACAAGAAAT+GGG | + | chr3_1:67893352-67893371 | None:intergenic | 20.0% |
| !! | ATTGATGAAAAAACAAGAAA+TGG | + | chr3_1:67893353-67893372 | None:intergenic | 20.0% |
| !!! | TTGTTTTGTTTTTGCTTTTT+TGG | - | chr3_1:67893670-67893689 | Msa0370280:intron | 20.0% |
| !! | TATGTTATCCCTTTAATATT+GGG | - | chr3_1:67894128-67894147 | Msa0370280:intron | 20.0% |
| !! | AAATAGGGATAAAAAATTCA+AGG | + | chr3_1:67894194-67894213 | None:intergenic | 20.0% |
| !!! | TTTTTATCCCTATTTTTAAG+GGG | - | chr3_1:67894199-67894218 | Msa0370280:intron | 20.0% |
| !! | ATGAAATTACCAAAACAATT+TGG | - | chr3_1:67894389-67894408 | Msa0370280:intron | 20.0% |
| !! | CATTATACTCCTAATTTATT+TGG | + | chr3_1:67894447-67894466 | None:intergenic | 20.0% |
| !!! | CAAAAAATATGTTCTTGTTT+TGG | - | chr3_1:67894539-67894558 | Msa0370280:CDS | 20.0% |
| !!! | ATGTGTAAAACTAAGTATTT+TGG | - | chr3_1:67894650-67894669 | Msa0370280:intron | 20.0% |
| !! | TTTATTGTGTGAGAAAAATA+TGG | - | chr3_1:67895009-67895028 | Msa0370280:intron | 20.0% |
| !! | TGAGAAAAATATGGATAATT+TGG | - | chr3_1:67895018-67895037 | Msa0370280:intron | 20.0% |
| !! | ATATGTATAATTAGCTATAG+AGG | - | chr3_1:67896603-67896622 | Msa0370280:CDS | 20.0% |
| !! | TGCTAGTAGAATATTTATTT+AGG | - | chr3_1:67896626-67896645 | Msa0370280:CDS | 20.0% |
| !!! | ATGAATTAGTCTATGGTTTT+TGG | + | chr3_1:67893127-67893146 | None:intergenic | 25.0% |
| !! | CAAAAGAATGAATTAGTCTA+TGG | + | chr3_1:67893134-67893153 | None:intergenic | 25.0% |
| ! | TGTTATAGATATTGGAACTT+TGG | + | chr3_1:67893166-67893185 | None:intergenic | 25.0% |
| ! | GAAGAAGTTGTTATAGATAT+TGG | + | chr3_1:67893174-67893193 | None:intergenic | 25.0% |
| ! | AAGGAAAAAACAGAGAAAAT+TGG | + | chr3_1:67893287-67893306 | None:intergenic | 25.0% |
| !! | TTGGTTTGAAATCAAAATCA+TGG | - | chr3_1:67893401-67893420 | Msa0370280:three_prime_UTR | 25.0% |
| !! | TGGTTTGAAATCAAAATCAT+GGG | - | chr3_1:67893402-67893421 | Msa0370280:three_prime_UTR | 25.0% |
| !! | TGAACTTTATGATCTGATTT+TGG | - | chr3_1:67893449-67893468 | Msa0370280:three_prime_UTR | 25.0% |
| ! | AAGAAACAAATCTAGCTAAA+AGG | + | chr3_1:67893813-67893832 | None:intergenic | 25.0% |
| !! | TGTTTAATTTCTTGAATGCT+AGG | - | chr3_1:67893873-67893892 | Msa0370280:CDS | 25.0% |
| !! | GTTTAATTTCTTGAATGCTA+GGG | - | chr3_1:67893874-67893893 | Msa0370280:CDS | 25.0% |
| ! | AAATTGAGTCAAAGTAAGAT+AGG | + | chr3_1:67894106-67894125 | None:intergenic | 25.0% |
| ! | TATCTTACTTTGACTCAATT+TGG | - | chr3_1:67894105-67894124 | Msa0370280:intron | 25.0% |
| ! | GTATGTTATCCCTTTAATAT+TGG | - | chr3_1:67894127-67894146 | Msa0370280:intron | 25.0% |
| ! | TTCTTCATCCCAATATTAAA+GGG | + | chr3_1:67894139-67894158 | None:intergenic | 25.0% |
| ! | ATTCTTCATCCCAATATTAA+AGG | + | chr3_1:67894140-67894159 | None:intergenic | 25.0% |
| ! | TCGATGAGTTTAATTATGAT+GGG | - | chr3_1:67894222-67894241 | Msa0370280:intron | 25.0% |
| ! | ATTGTTATCAGATTCATGAT+TGG | - | chr3_1:67894324-67894343 | Msa0370280:CDS | 25.0% |
| ! | TTGTTATCAGATTCATGATT+GGG | - | chr3_1:67894325-67894344 | Msa0370280:CDS | 25.0% |
| !! | TAAATCACACCAAATTGTTT+TGG | + | chr3_1:67894401-67894420 | None:intergenic | 25.0% |
| !!! | AAAACAATTTGGTGTGATTT+AGG | - | chr3_1:67894400-67894419 | Msa0370280:intron | 25.0% |
| ! | TTAGGAGATAATAACAATGA+AGG | - | chr3_1:67894418-67894437 | Msa0370280:intron | 25.0% |
| !! | TTTCAAAGTGACTTATGTTT+TGG | + | chr3_1:67894623-67894642 | None:intergenic | 25.0% |
| ! | AGAAAAACAAAGAACTGTAA+CGG | + | chr3_1:67894794-67894813 | None:intergenic | 25.0% |
| ! | ACATGATCTGATCATTTATA+TGG | - | chr3_1:67894838-67894857 | Msa0370280:intron | 25.0% |
| ! | CATGATCTGATCATTTATAT+GGG | - | chr3_1:67894839-67894858 | Msa0370280:intron | 25.0% |
| ! | TTTATATGGGTTCTACTTAA+TGG | - | chr3_1:67894852-67894871 | Msa0370280:intron | 25.0% |
| !!! | TTTGGCTTAATTTTGACATT+TGG | - | chr3_1:67895036-67895055 | Msa0370280:intron | 25.0% |
| ! | TTTAGGTATATATCTGTCTT+AGG | - | chr3_1:67895193-67895212 | Msa0370280:intron | 25.0% |
| ! | TAAAGGTTTAAAAGAAACGA+TGG | + | chr3_1:67895245-67895264 | None:intergenic | 25.0% |
| !!! | TTATTTTTTTGGGGGAAATA+GGG | + | chr3_1:67895281-67895300 | None:intergenic | 25.0% |
| ! | TTCGCATATTTGTGTAAAAT+TGG | + | chr3_1:67896008-67896027 | None:intergenic | 25.0% |
| ! | TTTAGATTTATATCCAAAGG+AGG | - | chr3_1:67896390-67896409 | Msa0370280:CDS | 25.0% |
| ! | AAAAAAAAATCATCCTCCTT+TGG | + | chr3_1:67896406-67896425 | None:intergenic | 25.0% |
| !!! | GAGGATGATTTTTTTTTTTC+TGG | - | chr3_1:67896409-67896428 | Msa0370280:intron | 25.0% |
| !!! | TATAACATTGACCATTTTTG+TGG | - | chr3_1:67896506-67896525 | Msa0370280:intron | 25.0% |
| !!! | ATAACATTGACCATTTTTGT+GGG | - | chr3_1:67896507-67896526 | Msa0370280:intron | 25.0% |
| ! | TATGCTTAACGAATAATACT+AGG | - | chr3_1:67896873-67896892 | Msa0370280:five_prime_UTR | 25.0% |
| ATAGATATTGGAACTTTGGT+GGG | + | chr3_1:67893162-67893181 | None:intergenic | 30.0% | |
| TATAGATATTGGAACTTTGG+TGG | + | chr3_1:67893163-67893182 | None:intergenic | 30.0% | |
| TTGTGAGTTAGATGAAGAAT+TGG | + | chr3_1:67893205-67893224 | None:intergenic | 30.0% | |
| ! | AATCCATTTAGCAGAGATTT+TGG | + | chr3_1:67893264-67893283 | None:intergenic | 30.0% |
| !!! | TCTGTTTTTTCCTTCCTTAT+TGG | - | chr3_1:67893293-67893312 | Msa0370280:three_prime_UTR | 30.0% |
| ! | TTTTGTGTTGTGAGTGATTT+TGG | - | chr3_1:67893382-67893401 | Msa0370280:three_prime_UTR | 30.0% |
| ! | GGTTTGAAATCAAAATCATG+GGG | - | chr3_1:67893403-67893422 | Msa0370280:three_prime_UTR | 30.0% |
| !!! | TTTGTGGTTTTTTTTGTAGC+AGG | - | chr3_1:67893489-67893508 | Msa0370280:three_prime_UTR | 30.0% |
| !!! | TTTTTTTTGTAGCAGGATGT+GGG | - | chr3_1:67893496-67893515 | Msa0370280:three_prime_UTR | 30.0% |
| ATTATCACACCATTTGATTC+AGG | + | chr3_1:67893527-67893546 | None:intergenic | 30.0% | |
| ! | TAATCAAGCACATACCTTTT+TGG | + | chr3_1:67893609-67893628 | None:intergenic | 30.0% |
| GTTATTCCAAAAAAGTGGTA+GGG | + | chr3_1:67893705-67893724 | None:intergenic | 30.0% | |
| TGTTATTCCAAAAAAGTGGT+AGG | + | chr3_1:67893706-67893725 | None:intergenic | 30.0% | |
| CTTCTGTTATTCCAAAAAAG+TGG | + | chr3_1:67893710-67893729 | None:intergenic | 30.0% | |
| !!! | TTTTTTGGAATAACAGAAGC+AGG | - | chr3_1:67893711-67893730 | Msa0370280:intron | 30.0% |
| AATTCATTCATGTCATCCTT+GGG | + | chr3_1:67893742-67893761 | None:intergenic | 30.0% | |
| CAAATCTAGCTAAAAGGAAA+TGG | + | chr3_1:67893807-67893826 | None:intergenic | 30.0% | |
| ATATTGGGATGAAGAATTTG+AGG | - | chr3_1:67894143-67894162 | Msa0370280:intron | 30.0% | |
| TTCAAGGATAACTAACGTTA+AGG | + | chr3_1:67894178-67894197 | None:intergenic | 30.0% | |
| GTCGATGAGTTTAATTATGA+TGG | - | chr3_1:67894221-67894240 | Msa0370280:intron | 30.0% | |
| !! | TTTGTTCTTCCATTTTGATC+AGG | - | chr3_1:67894267-67894286 | Msa0370280:CDS | 30.0% |
| AACAACTTCTTCAATTGGAA+CGG | - | chr3_1:67894292-67894311 | Msa0370280:CDS | 30.0% | |
| TGAAGGTGACCAAATAAATT+AGG | - | chr3_1:67894435-67894454 | Msa0370280:intron | 30.0% | |
| ! | TTCATAGTTCTTTGAGTTTG+AGG | + | chr3_1:67894723-67894742 | None:intergenic | 30.0% |
| GAAAAACAAAGAACTGTAAC+GGG | + | chr3_1:67894793-67894812 | None:intergenic | 30.0% | |
| TGATCAGATCATGTAGTAAT+TGG | + | chr3_1:67894832-67894851 | None:intergenic | 30.0% | |
| ATCTTATAGCAACATGTTGA+AGG | - | chr3_1:67895068-67895087 | Msa0370280:intron | 30.0% | |
| ! | ATTTTCTTTTCTACTGCAGT+TGG | - | chr3_1:67895119-67895138 | Msa0370280:intron | 30.0% |
| !!! | GTTATTTTTTTGGGGGAAAT+AGG | + | chr3_1:67895282-67895301 | None:intergenic | 30.0% |
| !!! | AAGAGCGGAGTTATTTTTTT+GGG | + | chr3_1:67895291-67895310 | None:intergenic | 30.0% |
| ACTTACTTTCGAGATAAAAC+AGG | + | chr3_1:67895400-67895419 | None:intergenic | 30.0% | |
| ATAAACATTAAGCCACAATC+AGG | + | chr3_1:67895505-67895524 | None:intergenic | 30.0% | |
| !! | ACGTTGTTTCTGCATTTATA+GGG | - | chr3_1:67895534-67895553 | Msa0370280:intron | 30.0% |
| ! | ATATGCAATCTCTAAGGATT+TGG | - | chr3_1:67895636-67895655 | Msa0370280:intron | 30.0% |
| !! | AACATATACGTACTGGTTAA+TGG | + | chr3_1:67895674-67895693 | None:intergenic | 30.0% |
| GTAAAGAAACATATACGTAC+TGG | + | chr3_1:67895681-67895700 | None:intergenic | 30.0% | |
| TCTTTACACAGTCCTTAATT+TGG | - | chr3_1:67895694-67895713 | Msa0370280:intron | 30.0% | |
| TTCCATTCAAAAATGATCCT+CGG | + | chr3_1:67895723-67895742 | None:intergenic | 30.0% | |
| ACAAGCTGAGATTTCATATT+TGG | + | chr3_1:67895875-67895894 | None:intergenic | 30.0% | |
| AAATATGTGCACTCAAAATG+TGG | - | chr3_1:67896335-67896354 | Msa0370280:CDS | 30.0% | |
| AGATAAGACTTGCATAAATG+TGG | - | chr3_1:67896557-67896576 | Msa0370280:intron | 30.0% | |
| AACATCAGTTTGATCTGATT+CGG | - | chr3_1:67896774-67896793 | Msa0370280:five_prime_UTR | 30.0% | |
| CTACCAAAATCTCTGCTAAA+TGG | - | chr3_1:67893258-67893277 | Msa0370280:three_prime_UTR | 35.0% | |
| AAACAAGAAATGGGCAAGAA+GGG | + | chr3_1:67893343-67893362 | None:intergenic | 35.0% | |
| AAAACAAGAAATGGGCAAGA+AGG | + | chr3_1:67893344-67893363 | None:intergenic | 35.0% | |
| !!! | GTTTTTTTTGTAGCAGGATG+TGG | - | chr3_1:67893495-67893514 | Msa0370280:three_prime_UTR | 35.0% |
| !!! | AGTAAACCCTACCACTTTTT+TGG | - | chr3_1:67893696-67893715 | Msa0370280:intron | 35.0% |
| CAATTCATTCATGTCATCCT+TGG | + | chr3_1:67893743-67893762 | None:intergenic | 35.0% | |
| TGCTAATTCCATTTGCAACA+TGG | + | chr3_1:67893918-67893937 | None:intergenic | 35.0% | |
| TATAAACGCCTTCTTCTTCT+TGG | + | chr3_1:67894005-67894024 | None:intergenic | 35.0% | |
| !! | AAGAAGGCGTTTATAGTGAT+AGG | - | chr3_1:67894010-67894029 | Msa0370280:intron | 35.0% |
| GAGATTCAGTTAGAGAAACT+TGG | - | chr3_1:67894065-67894084 | Msa0370280:intron | 35.0% | |
| AGTAAGATAGGTTTACCTTG+AGG | + | chr3_1:67894094-67894113 | None:intergenic | 35.0% | |
| TCATCGACCCCTTAAAAATA+GGG | + | chr3_1:67894209-67894228 | None:intergenic | 35.0% | |
| AGTTGTTCACCTGATCAAAA+TGG | + | chr3_1:67894279-67894298 | None:intergenic | 35.0% | |
| AGGTGAACAACTTCTTCAAT+TGG | - | chr3_1:67894287-67894306 | Msa0370280:CDS | 35.0% | |
| ACAACTTCTTCAATTGGAAC+GGG | - | chr3_1:67894293-67894312 | Msa0370280:CDS | 35.0% | |
| ACTATGAATGCCTGCAAAAA+TGG | - | chr3_1:67894735-67894754 | Msa0370280:CDS | 35.0% | |
| CTTGTATGACCAATATCACT+TGG | - | chr3_1:67894758-67894777 | Msa0370280:CDS | 35.0% | |
| AAGTTGCACTGAAACAACAA+TGG | + | chr3_1:67894898-67894917 | None:intergenic | 35.0% | |
| GACGATGTTCATGTCAATTT+AGG | - | chr3_1:67895176-67895195 | Msa0370280:intron | 35.0% | |
| !!! | AGAGCGGAGTTATTTTTTTG+GGG | + | chr3_1:67895290-67895309 | None:intergenic | 35.0% |
| !!! | GAAGAGCGGAGTTATTTTTT+TGG | + | chr3_1:67895292-67895311 | None:intergenic | 35.0% |
| TACATTGGGTGTATGAAATC+TGG | - | chr3_1:67895373-67895392 | Msa0370280:intron | 35.0% | |
| TATCTCGAAAGTAAGTACAC+TGG | - | chr3_1:67895404-67895423 | Msa0370280:intron | 35.0% | |
| AAAGTAAGTACACTGGATTC+TGG | - | chr3_1:67895411-67895430 | Msa0370280:intron | 35.0% | |
| ACACTGGATTCTGGATTATT+TGG | - | chr3_1:67895420-67895439 | Msa0370280:intron | 35.0% | |
| TGCAGAAACAACGTCAAAAA+TGG | + | chr3_1:67895528-67895547 | None:intergenic | 35.0% | |
| !! | GACGTTGTTTCTGCATTTAT+AGG | - | chr3_1:67895533-67895552 | Msa0370280:intron | 35.0% |
| !! | TTTTGGAAGTTTGGAGAAGA+GGG | - | chr3_1:67895580-67895599 | Msa0370280:CDS | 35.0% |
| GCAGATATATGCAATCTCTA+AGG | - | chr3_1:67895630-67895649 | Msa0370280:intron | 35.0% | |
| !! | AACCGAGGATCATTTTTGAA+TGG | - | chr3_1:67895718-67895737 | Msa0370280:intron | 35.0% |
| ! | GATAGTCCTGCAGATTTTAT+TGG | - | chr3_1:67895782-67895801 | Msa0370280:intron | 35.0% |
| TTGCTTCCAATAAAATCTGC+AGG | + | chr3_1:67895791-67895810 | None:intergenic | 35.0% | |
| !! | TCTTGCTGGTTCTATAATCA+AGG | + | chr3_1:67895906-67895925 | None:intergenic | 35.0% |
| GGATACATAAAGATTCTTGC+TGG | + | chr3_1:67895920-67895939 | None:intergenic | 35.0% | |
| GATTGCTTCAAGTATATACC+TGG | + | chr3_1:67896113-67896132 | None:intergenic | 35.0% | |
| CTACTTGTTTAAATTGCAGC+CGG | - | chr3_1:67896444-67896463 | Msa0370280:intron | 35.0% | |
| TTCTCAAATCCGAAATGTTC+CGG | + | chr3_1:67896466-67896485 | None:intergenic | 35.0% | |
| TAAGACTTGCATAAATGTGG+AGG | - | chr3_1:67896560-67896579 | Msa0370280:intron | 35.0% | |
| TTGTGATGAGCATGCCAATA+AGG | + | chr3_1:67893310-67893329 | None:intergenic | 40.0% | |
| AGAACTTCAAGTGATCTCTG+AGG | - | chr3_1:67893571-67893590 | Msa0370280:CDS | 40.0% | |
| GGATTGTGATGTGACCAAAA+AGG | - | chr3_1:67893592-67893611 | Msa0370280:CDS | 40.0% | |
| ! | CATGGAAACTTGCTTGTCTA+GGG | + | chr3_1:67893900-67893919 | None:intergenic | 40.0% |
| ! | ACATGGAAACTTGCTTGTCT+AGG | + | chr3_1:67893901-67893920 | None:intergenic | 40.0% |
| GCAAGTTTCCATGTTGCAAA+TGG | - | chr3_1:67893907-67893926 | Msa0370280:CDS | 40.0% | |
| AAATGGAATTAGCAGCAGCT+AGG | - | chr3_1:67893924-67893943 | Msa0370280:intron | 40.0% | |
| TCTCGTGAAAAGAACTCAAC+TGG | - | chr3_1:67893950-67893969 | Msa0370280:intron | 40.0% | |
| TGAAAAGAACTCAACTGGCT+CGG | - | chr3_1:67893955-67893974 | Msa0370280:intron | 40.0% | |
| TAAACACAGCTTTCAGTAGC+AGG | - | chr3_1:67894035-67894054 | Msa0370280:intron | 40.0% | |
| CTCATCGACCCCTTAAAAAT+AGG | + | chr3_1:67894210-67894229 | None:intergenic | 40.0% | |
| !!! | GTCATACAAGCCATTTTTGC+AGG | + | chr3_1:67894748-67894767 | None:intergenic | 40.0% |
| GAATAATGATCTGCCTTACC+AGG | + | chr3_1:67894982-67895001 | None:intergenic | 40.0% | |
| TTTCTACTGCAGTTGGATTG+TGG | - | chr3_1:67895126-67895145 | Msa0370280:intron | 40.0% | |
| TTCTACTGCAGTTGGATTGT+GGG | - | chr3_1:67895127-67895146 | Msa0370280:intron | 40.0% | |
| !!! | GAGCGGAGTTATTTTTTTGG+GGG | + | chr3_1:67895289-67895308 | None:intergenic | 40.0% |
| CTAAGAGCAACAAAGAAGAG+CGG | + | chr3_1:67895306-67895325 | None:intergenic | 40.0% | |
| TTTGTTGCTCTTAGGTGTCT+TGG | - | chr3_1:67895312-67895331 | Msa0370280:intron | 40.0% | |
| CTGGATTCTGGATTATTTGG+AGG | - | chr3_1:67895423-67895442 | Msa0370280:intron | 40.0% | |
| !! | TTATTTCTGTCTGAACCCTC+CGG | + | chr3_1:67895464-67895483 | None:intergenic | 40.0% |
| ! | AGTACCATGAACCTGAGTTT+TGG | - | chr3_1:67895563-67895582 | Msa0370280:intron | 40.0% |
| ACTTCCAAAACTCAGGTTCA+TGG | + | chr3_1:67895570-67895589 | None:intergenic | 40.0% | |
| !!! | GAACCTGAGTTTTGGAAGTT+TGG | - | chr3_1:67895571-67895590 | Msa0370280:intron | 40.0% |
| TCTCCAAACTTCCAAAACTC+AGG | + | chr3_1:67895577-67895596 | None:intergenic | 40.0% | |
| !!! | GTTTTGGAAGTTTGGAGAAG+AGG | - | chr3_1:67895579-67895598 | Msa0370280:intron | 40.0% |
| AGAGATTGCATATATCTGCC+CGG | + | chr3_1:67895629-67895648 | None:intergenic | 40.0% | |
| ! | ATTGGCCTGCAATCATAATG+AGG | + | chr3_1:67895990-67896009 | None:intergenic | 40.0% |
| AAGACGTTTCACTTGGTTCA+TGG | - | chr3_1:67896030-67896049 | Msa0370280:intron | 40.0% | |
| TCACTTGGTTCATGGTTCAT+TGG | - | chr3_1:67896038-67896057 | Msa0370280:intron | 40.0% | |
| CTTCAAGTATATACCTGGAG+GGG | + | chr3_1:67896108-67896127 | None:intergenic | 40.0% | |
| GCTTCAAGTATATACCTGGA+GGG | + | chr3_1:67896109-67896128 | None:intergenic | 40.0% | |
| TGCTTCAAGTATATACCTGG+AGG | + | chr3_1:67896110-67896129 | None:intergenic | 40.0% | |
| TCAAAATGTGGTGAAGGAGA+TGG | - | chr3_1:67896347-67896366 | Msa0370280:CDS | 40.0% | |
| AAATTGCAGCCGGAACATTT+CGG | - | chr3_1:67896454-67896473 | Msa0370280:intron | 40.0% | |
| CTCTAAGCTTCCCACAAAAA+TGG | + | chr3_1:67896520-67896539 | None:intergenic | 40.0% | |
| ! | CATTTTTGTGGGAAGCTTAG+AGG | - | chr3_1:67896518-67896537 | Msa0370280:intron | 40.0% |
| AAATGTGGAGGATTTGAGCA+TGG | - | chr3_1:67896572-67896591 | Msa0370280:intron | 40.0% | |
| AATGTGGAGGATTTGAGCAT+GGG | - | chr3_1:67896573-67896592 | Msa0370280:intron | 40.0% | |
| ! | AGAAGCACGAGTCTTCATGT+TGG | + | chr3_1:67893240-67893259 | None:intergenic | 45.0% |
| GATGAGCATGCCAATAAGGA+AGG | + | chr3_1:67893306-67893325 | None:intergenic | 45.0% | |
| TTGGCATGCTCATCACAACT+AGG | - | chr3_1:67893312-67893331 | Msa0370280:three_prime_UTR | 45.0% | |
| TGGGAGCAACCTGAATCAAA+TGG | - | chr3_1:67893515-67893534 | Msa0370280:three_prime_UTR | 45.0% | |
| AGGTGCTTCCAAGAAGAAGA+AGG | - | chr3_1:67893994-67894013 | Msa0370280:intron | 45.0% | |
| AGAGAAACTTGGATGCCTCA+AGG | - | chr3_1:67894076-67894095 | Msa0370280:intron | 45.0% | |
| CTTCAATTGGAACGGGAGAA+AGG | - | chr3_1:67894300-67894319 | Msa0370280:CDS | 45.0% | |
| TCAGATTCATGATTGGGCAC+AGG | - | chr3_1:67894331-67894350 | Msa0370280:CDS | 45.0% | |
| GACCAATATCACTTGGCAGT+TGG | - | chr3_1:67894765-67894784 | Msa0370280:CDS | 45.0% | |
| AGCCAACTGCCAAGTGATAT+TGG | + | chr3_1:67894770-67894789 | None:intergenic | 45.0% | |
| ! | AGCACGATCTAGAATGCTGT+TGG | + | chr3_1:67894921-67894940 | None:intergenic | 45.0% |
| AGGGCAGAGATAAGTGGTAA+AGG | + | chr3_1:67895262-67895281 | None:intergenic | 45.0% | |
| GGAAATAGGGCAGAGATAAG+TGG | + | chr3_1:67895268-67895287 | None:intergenic | 45.0% | |
| CGCTCTTCTTTGTTGCTCTT+AGG | - | chr3_1:67895304-67895323 | Msa0370280:intron | 45.0% | |
| !!! | TTTTGAACGATGACGGGCAA+GGG | + | chr3_1:67895344-67895363 | None:intergenic | 45.0% |
| TCAAAACCCAGGGTCTACAT+TGG | - | chr3_1:67895358-67895377 | Msa0370280:intron | 45.0% | |
| CAAAACCCAGGGTCTACATT+GGG | - | chr3_1:67895359-67895378 | Msa0370280:intron | 45.0% | |
| ATACACCCAATGTAGACCCT+GGG | + | chr3_1:67895367-67895386 | None:intergenic | 45.0% | |
| TTAAGCCACAATCAGGAGCA+TGG | + | chr3_1:67895498-67895517 | None:intergenic | 45.0% | |
| AAATACTTCCGACACGCAAC+CGG | - | chr3_1:67895607-67895626 | Msa0370280:CDS | 45.0% | |
| ! | AGTCCTTAATTTGGCAACCG+AGG | - | chr3_1:67895703-67895722 | Msa0370280:intron | 45.0% |
| GATCCTCGGTTGCCAAATTA+AGG | + | chr3_1:67895709-67895728 | None:intergenic | 45.0% | |
| GAGGTCCTCATTATGATTGC+AGG | - | chr3_1:67895982-67896001 | Msa0370280:CDS | 45.0% | |
| GCGAATGAAGACGTTTCACT+TGG | - | chr3_1:67896023-67896042 | Msa0370280:intron | 45.0% | |
| AATGTTGTGCAGACTGTGAG+TGG | - | chr3_1:67896234-67896253 | Msa0370280:intron | 45.0% | |
| TATGCGTTGCGTCGTTTGAT+TGG | - | chr3_1:67896276-67896295 | Msa0370280:intron | 45.0% | |
| GTGCACTCAAAATGTGGTGA+AGG | - | chr3_1:67896341-67896360 | Msa0370280:CDS | 45.0% | |
| ATGTGGAGGATTTGAGCATG+GGG | - | chr3_1:67896574-67896593 | Msa0370280:intron | 45.0% | |
| TAGCAACAACCATGCTACCT+TGG | + | chr3_1:67896814-67896833 | None:intergenic | 45.0% | |
| !!! | ATATTTTTCTTATATAAAAA+CGG | - | chr3_1:67893062-67893081 | Msa0370280:three_prime_UTR | 5.0% |
| ACAGAAGCAGGAAAAGCCCA+AGG | - | chr3_1:67893723-67893742 | Msa0370280:intron | 50.0% | |
| AGCACCTTCACTGGAATTGG+TGG | + | chr3_1:67893981-67894000 | None:intergenic | 50.0% | |
| !! | GGAAGCACCTTCACTGGAAT+TGG | + | chr3_1:67893984-67894003 | None:intergenic | 50.0% |
| !! | CTTCTTGGAAGCACCTTCAC+TGG | + | chr3_1:67893990-67894009 | None:intergenic | 50.0% |
| ACACAAAGACTTCCTTCGCC+TGG | - | chr3_1:67894961-67894980 | Msa0370280:CDS | 50.0% | |
| AAGACTTCCTTCGCCTGGTA+AGG | - | chr3_1:67894966-67894985 | Msa0370280:CDS | 50.0% | |
| !!! | GTTTTGAACGATGACGGGCA+AGG | + | chr3_1:67895345-67895364 | None:intergenic | 50.0% |
| !!! | CCTGGGTTTTGAACGATGAC+GGG | + | chr3_1:67895350-67895369 | None:intergenic | 50.0% |
| !!! | CCCTGGGTTTTGAACGATGA+CGG | + | chr3_1:67895351-67895370 | None:intergenic | 50.0% |
| CCGTCATCGTTCAAAACCCA+GGG | - | chr3_1:67895348-67895367 | Msa0370280:intron | 50.0% | |
| CATACACCCAATGTAGACCC+TGG | + | chr3_1:67895368-67895387 | None:intergenic | 50.0% | |
| CTCTTCCATGCTCCTGATTG+TGG | - | chr3_1:67895490-67895509 | Msa0370280:intron | 50.0% | |
| AATACTTCCGACACGCAACC+GGG | - | chr3_1:67895608-67895627 | Msa0370280:CDS | 50.0% | |
| TTGTGCAGACTGTGAGTGGA+AGG | - | chr3_1:67896238-67896257 | Msa0370280:intron | 50.0% | |
| TCGTTTGATTGGAGCTGCAG+TGG | - | chr3_1:67896287-67896306 | Msa0370280:intron | 50.0% | |
| CAGTGGAATCTGCAAGTCAG+TGG | - | chr3_1:67896304-67896323 | Msa0370280:intron | 50.0% | |
| GTGAAGGAGATGGAGCTGTT+TGG | - | chr3_1:67896357-67896376 | Msa0370280:CDS | 50.0% | |
| TTGTGGGAAGCTTAGAGGCA+AGG | - | chr3_1:67896523-67896542 | Msa0370280:intron | 50.0% | |
| ACAACCATGCTACCTTGGCT+GGG | + | chr3_1:67896809-67896828 | None:intergenic | 50.0% | |
| AACAACCATGCTACCTTGGC+TGG | + | chr3_1:67896810-67896829 | None:intergenic | 50.0% | |
| TCGGCCACCAATTCCAGTGA+AGG | - | chr3_1:67893974-67893993 | Msa0370280:intron | 55.0% | |
| TGATCTGCCTTACCAGGCGA+AGG | + | chr3_1:67894976-67894995 | None:intergenic | 55.0% | |
| CCCGTCATCGTTCAAAACCC+AGG | - | chr3_1:67895347-67895366 | Msa0370280:intron | 55.0% | |
| TCTGAACCCTCCGGCTTCTA+GGG | + | chr3_1:67895455-67895474 | None:intergenic | 55.0% | |
| ATATCTGCCCGGTTGCGTGT+CGG | + | chr3_1:67895618-67895637 | None:intergenic | 55.0% | |
| GATGACCGCAGTATGTGCTG+TGG | - | chr3_1:67896080-67896099 | Msa0370280:intron | 55.0% | |
| GGGTTCCACAGCACATACTG+CGG | + | chr3_1:67896088-67896107 | None:intergenic | 55.0% | |
| ! | AGACTGTGAGTGGAAGGCAC+AGG | - | chr3_1:67896244-67896263 | Msa0370280:intron | 55.0% |
| TGGAGGATTTGAGCATGGGG+TGG | - | chr3_1:67896577-67896596 | Msa0370280:intron | 55.0% | |
| GGAGGATTTGAGCATGGGGT+GGG | - | chr3_1:67896578-67896597 | Msa0370280:intron | 55.0% | |
| GAGGATTTGAGCATGGGGTG+GGG | - | chr3_1:67896579-67896598 | Msa0370280:intron | 55.0% | |
| AGGATTTGAGCATGGGGTGG+GGG | - | chr3_1:67896580-67896599 | Msa0370280:intron | 55.0% | |
| GAGGCCTTTCCCCTAGAAGC+CGG | - | chr3_1:67895442-67895461 | Msa0370280:intron | 60.0% | |
| CCTTTCCCCTAGAAGCCGGA+GGG | - | chr3_1:67895446-67895465 | Msa0370280:intron | 60.0% | |
| CTGAACCCTCCGGCTTCTAG+GGG | + | chr3_1:67895454-67895473 | None:intergenic | 60.0% | |
| GTCTGAACCCTCCGGCTTCT+AGG | + | chr3_1:67895456-67895475 | None:intergenic | 60.0% | |
| ATGTGCTGTGGAACCCCTCC+AGG | - | chr3_1:67896092-67896111 | Msa0370280:intron | 60.0% | |
| ! | TGTGAGTGGAAGGCACAGGC+AGG | - | chr3_1:67896248-67896267 | Msa0370280:intron | 60.0% |
| GGGAAGCTTAGAGGCAAGGC+TGG | - | chr3_1:67896527-67896546 | Msa0370280:intron | 60.0% | |
| GTTGCCCAGCCAAGGTAGCA+TGG | - | chr3_1:67896802-67896821 | Msa0370280:five_prime_UTR | 60.0% | |
| GCCTTTCCCCTAGAAGCCGG+AGG | - | chr3_1:67895445-67895464 | Msa0370280:intron | 65.0% | |
| ! | CCCTCCGGCTTCTAGGGGAA+AGG | + | chr3_1:67895449-67895468 | None:intergenic | 65.0% |
| CGGACTCAGTTGCCCAGCCA+AGG | - | chr3_1:67896794-67896813 | Msa0370280:five_prime_UTR | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 67893016 | 67896916 | 67893016 | ID=Msa0370280;Name=Msa0370280 |
| chr3_1 | mRNA | 67893016 | 67896916 | 67893016 | ID=Msa0370280-mRNA-1;Parent=Msa0370280;Name=Msa0370280-mRNA-1;_AED=0.11;_eAED=0.11;_QI=226|1|1|1|0.9|0.90|11|522|396 |
| chr3_1 | exon | 67893016 | 67893686 | 67893016 | ID=Msa0370280-mRNA-1:exon:14150;Parent=Msa0370280-mRNA-1 |
| chr3_1 | exon | 67893819 | 67893928 | 67893819 | ID=Msa0370280-mRNA-1:exon:14149;Parent=Msa0370280-mRNA-1 |
| chr3_1 | exon | 67894252 | 67894377 | 67894252 | ID=Msa0370280-mRNA-1:exon:14148;Parent=Msa0370280-mRNA-1 |
| chr3_1 | exon | 67894519 | 67894606 | 67894519 | ID=Msa0370280-mRNA-1:exon:14147;Parent=Msa0370280-mRNA-1 |
| chr3_1 | exon | 67894735 | 67894855 | 67894735 | ID=Msa0370280-mRNA-1:exon:14146;Parent=Msa0370280-mRNA-1 |
| chr3_1 | exon | 67894950 | 67895022 | 67894950 | ID=Msa0370280-mRNA-1:exon:14145;Parent=Msa0370280-mRNA-1 |
| chr3_1 | exon | 67895580 | 67895643 | 67895580 | ID=Msa0370280-mRNA-1:exon:14144;Parent=Msa0370280-mRNA-1 |
| chr3_1 | exon | 67895835 | 67896037 | 67895835 | ID=Msa0370280-mRNA-1:exon:14143;Parent=Msa0370280-mRNA-1 |
| chr3_1 | exon | 67896147 | 67896205 | 67896147 | ID=Msa0370280-mRNA-1:exon:14142;Parent=Msa0370280-mRNA-1 |
| chr3_1 | exon | 67896319 | 67896424 | 67896319 | ID=Msa0370280-mRNA-1:exon:14141;Parent=Msa0370280-mRNA-1 |
| chr3_1 | exon | 67896599 | 67896916 | 67896599 | ID=Msa0370280-mRNA-1:exon:14140;Parent=Msa0370280-mRNA-1 |
| chr3_1 | five_prime_UTR | 67896691 | 67896916 | 67896691 | ID=Msa0370280-mRNA-1:five_prime_utr;Parent=Msa0370280-mRNA-1 |
| chr3_1 | CDS | 67896599 | 67896690 | 67896599 | ID=Msa0370280-mRNA-1:cds;Parent=Msa0370280-mRNA-1 |
| chr3_1 | CDS | 67896319 | 67896424 | 67896319 | ID=Msa0370280-mRNA-1:cds;Parent=Msa0370280-mRNA-1 |
| chr3_1 | CDS | 67896147 | 67896205 | 67896147 | ID=Msa0370280-mRNA-1:cds;Parent=Msa0370280-mRNA-1 |
| chr3_1 | CDS | 67895835 | 67896037 | 67895835 | ID=Msa0370280-mRNA-1:cds;Parent=Msa0370280-mRNA-1 |
| chr3_1 | CDS | 67895580 | 67895643 | 67895580 | ID=Msa0370280-mRNA-1:cds;Parent=Msa0370280-mRNA-1 |
| chr3_1 | CDS | 67894950 | 67895022 | 67894950 | ID=Msa0370280-mRNA-1:cds;Parent=Msa0370280-mRNA-1 |
| chr3_1 | CDS | 67894735 | 67894855 | 67894735 | ID=Msa0370280-mRNA-1:cds;Parent=Msa0370280-mRNA-1 |
| chr3_1 | CDS | 67894519 | 67894606 | 67894519 | ID=Msa0370280-mRNA-1:cds;Parent=Msa0370280-mRNA-1 |
| chr3_1 | CDS | 67894252 | 67894377 | 67894252 | ID=Msa0370280-mRNA-1:cds;Parent=Msa0370280-mRNA-1 |
| chr3_1 | CDS | 67893819 | 67893928 | 67893819 | ID=Msa0370280-mRNA-1:cds;Parent=Msa0370280-mRNA-1 |
| chr3_1 | CDS | 67893538 | 67893686 | 67893538 | ID=Msa0370280-mRNA-1:cds;Parent=Msa0370280-mRNA-1 |
| chr3_1 | three_prime_UTR | 67893016 | 67893537 | 67893016 | ID=Msa0370280-mRNA-1:three_prime_utr;Parent=Msa0370280-mRNA-1 |
| Gene Sequence |
| Protein sequence |
