Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0417770 | XP_003601133.1 | 99.241 | 395 | 3 | 0 | 1 | 395 | 1 | 395 | 0.0 | 820 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0417770 | sp|Q6NQB7|B3GT7_ARATH | 69.704 | 406 | 99 | 9 | 1 | 395 | 1 | 393 | 0.0 | 571 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0417770 | G7J458 | 99.241 | 395 | 3 | 0 | 1 | 395 | 1 | 395 | 0.0 | 820 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012710 | Msa0417770 | 0.812348 | 4.436545e-51 | -8.615850e-47 |
| Msa0017320 | Msa0417770 | 0.811739 | 6.023192e-51 | -8.615850e-47 |
| Msa0106050 | Msa0417770 | 0.810421 | 1.162151e-50 | -8.615850e-47 |
| Msa0125790 | Msa0417770 | 0.805948 | 1.043230e-49 | -8.615850e-47 |
| Msa0126880 | Msa0417770 | 0.828511 | 8.632131e-55 | -8.615850e-47 |
| Msa0152560 | Msa0417770 | 0.814077 | 1.850827e-51 | -8.615850e-47 |
| Msa0171980 | Msa0417770 | 0.805560 | 1.258508e-49 | -8.615850e-47 |
| Msa0174000 | Msa0417770 | 0.815487 | 9.015169e-52 | -8.615850e-47 |
| Msa0364790 | Msa0417770 | 0.810902 | 9.149567e-51 | -8.615850e-47 |
| Msa0370280 | Msa0417770 | 0.821277 | 4.398683e-53 | -8.615850e-47 |
| Msa0417770 | Msa0514610 | 0.806522 | 7.896137e-50 | -8.615850e-47 |
| Msa0417770 | Msa0659790 | 0.831932 | 1.260954e-55 | -8.615850e-47 |
| Msa0417770 | Msa0775560 | 0.812569 | 3.969283e-51 | -8.615850e-47 |
| Msa0417770 | Msa0809140 | 0.800087 | 1.699139e-48 | -8.615850e-47 |
| Msa0417770 | Msa0883520 | 0.801453 | 8.940840e-49 | -8.615850e-47 |
| Msa0417770 | Msa1074540 | 0.820051 | 8.411509e-53 | -8.615850e-47 |
| Msa0417770 | Msa1197070 | 0.807972 | 3.892136e-50 | -8.615850e-47 |
| Msa0417770 | Msa1276970 | 0.802755 | 4.825620e-49 | -8.615850e-47 |
| Msa0417770 | Msa1277780 | 0.801507 | 8.715327e-49 | -8.615850e-47 |
| Msa0417770 | Msa1421900 | 0.805099 | 1.571955e-49 | -8.615850e-47 |
| Msa0417770 | Msa1462470 | 0.823329 | 1.468943e-53 | -8.615850e-47 |
| Msa0274100 | Msa0417770 | 0.806151 | 9.456206e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0417770 | MtrunA17_Chr3g0115251 | 98.987 | 395 | 3 | 1 | 1 | 395 | 1 | 394 | 0.0 | 814 |
| Msa0417770 | MtrunA17_Chr4g0024631 | 63.452 | 394 | 136 | 3 | 9 | 395 | 15 | 407 | 0.0 | 528 |
| Msa0417770 | MtrunA17_Chr2g0322591 | 62.308 | 390 | 142 | 3 | 9 | 395 | 15 | 402 | 0.0 | 513 |
| Msa0417770 | MtrunA17_Chr4g0004991 | 71.181 | 288 | 83 | 0 | 108 | 395 | 7 | 294 | 3.53e-160 | 452 |
| Msa0417770 | MtrunA17_Chr4g0017871 | 73.770 | 244 | 64 | 0 | 150 | 393 | 4 | 247 | 2.12e-147 | 417 |
| Msa0417770 | MtrunA17_Chr5g0396961 | 41.389 | 360 | 169 | 7 | 16 | 373 | 23 | 342 | 1.17e-85 | 264 |
| Msa0417770 | MtrunA17_Chr3g0126221 | 39.024 | 369 | 180 | 8 | 7 | 373 | 17 | 342 | 2.29e-82 | 255 |
| Msa0417770 | MtrunA17_Chr1g0149521 | 38.788 | 330 | 178 | 5 | 16 | 344 | 30 | 336 | 5.64e-73 | 231 |
| Msa0417770 | MtrunA17_Chr8g0360581 | 36.071 | 280 | 163 | 8 | 106 | 382 | 62 | 328 | 1.38e-50 | 173 |
| Msa0417770 | MtrunA17_Chr2g0316241 | 34.752 | 282 | 167 | 7 | 102 | 380 | 53 | 320 | 1.94e-49 | 170 |
| Msa0417770 | MtrunA17_Chr4g0017861 | 39.490 | 157 | 80 | 4 | 10 | 163 | 17 | 161 | 3.88e-27 | 106 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0417770 | AT1G77810.2 | 71.537 | 397 | 98 | 7 | 1 | 395 | 1 | 384 | 0.0 | 584 |
| Msa0417770 | AT1G77810.1 | 71.000 | 400 | 98 | 8 | 1 | 395 | 1 | 387 | 0.0 | 578 |
| Msa0417770 | AT1G05170.2 | 63.198 | 394 | 137 | 3 | 9 | 395 | 15 | 407 | 0.0 | 535 |
| Msa0417770 | AT1G22015.1 | 64.541 | 392 | 135 | 4 | 3 | 393 | 5 | 393 | 0.0 | 528 |
| Msa0417770 | AT1G32930.1 | 61.111 | 396 | 143 | 3 | 5 | 395 | 10 | 399 | 0.0 | 518 |
| Msa0417770 | AT1G33430.1 | 63.185 | 383 | 132 | 4 | 10 | 387 | 7 | 385 | 1.31e-180 | 508 |
| Msa0417770 | AT2G32430.1 | 61.929 | 394 | 143 | 2 | 9 | 395 | 16 | 409 | 1.34e-180 | 508 |
| Msa0417770 | AT4G26940.1 | 62.404 | 391 | 141 | 4 | 9 | 395 | 19 | 407 | 6.83e-178 | 501 |
| Msa0417770 | AT1G33430.2 | 61.893 | 391 | 132 | 5 | 10 | 387 | 7 | 393 | 1.52e-177 | 500 |
| Msa0417770 | AT1G11730.1 | 60.104 | 386 | 133 | 6 | 9 | 393 | 17 | 382 | 9.92e-165 | 467 |
| Msa0417770 | AT1G05170.1 | 61.159 | 345 | 126 | 3 | 9 | 346 | 15 | 358 | 3.67e-157 | 447 |
| Msa0417770 | AT1G33430.3 | 59.804 | 306 | 114 | 4 | 10 | 310 | 7 | 308 | 3.30e-126 | 366 |
| Msa0417770 | AT4G26940.2 | 56.061 | 264 | 111 | 3 | 9 | 268 | 19 | 281 | 3.49e-93 | 282 |
| Msa0417770 | AT5G53340.2 | 39.818 | 329 | 175 | 6 | 16 | 342 | 19 | 326 | 1.28e-80 | 251 |
| Msa0417770 | AT5G53340.1 | 38.905 | 347 | 182 | 8 | 16 | 360 | 19 | 337 | 1.32e-80 | 251 |
| Msa0417770 | AT2G25300.1 | 40.060 | 332 | 170 | 8 | 16 | 344 | 31 | 336 | 3.33e-73 | 232 |
| Msa0417770 | AT2G25300.2 | 45.560 | 259 | 132 | 4 | 87 | 344 | 8 | 258 | 5.70e-73 | 229 |
| Msa0417770 | AT4G32120.1 | 38.554 | 332 | 175 | 6 | 16 | 344 | 30 | 335 | 4.60e-72 | 229 |
| Msa0417770 | AT1G53290.1 | 35.273 | 275 | 161 | 7 | 111 | 382 | 71 | 331 | 4.84e-50 | 172 |
| Msa0417770 | AT3G14960.1 | 35.472 | 265 | 154 | 7 | 119 | 380 | 77 | 327 | 1.15e-48 | 168 |
| Msa0417770 | AT2G26100.1 | 36.502 | 263 | 148 | 8 | 122 | 380 | 106 | 353 | 4.32e-48 | 167 |
| Msa0417770 | AT2G26100.2 | 37.712 | 236 | 135 | 6 | 122 | 354 | 106 | 332 | 3.26e-45 | 160 |
Find 102 sgRNAs with CRISPR-Local
Find 247 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCGCATATTTGTGTAAAAT+TGG | 0.192644 | 3_2:+65078284 | None:intergenic |
| TTTCTACTGCAGTTGGATTA+TGG | 0.220482 | 3_2:-65079163 | Msa0417770:CDS |
| GAAGAAGAAGTTATAGATAT+TGG | 0.223018 | 3_2:+65081111 | None:intergenic |
| AATCCATTTAGCAGAGATTT+TGG | 0.243247 | 3_2:+65081021 | None:intergenic |
| GACGATGTTCATGTCAATTT+AGG | 0.248599 | 3_2:-65079113 | Msa0417770:intron |
| AACATATACGTACTGGTTAA+TGG | 0.250748 | 3_2:+65078618 | None:intergenic |
| TATAAACGCCTTCTTCTTCT+TGG | 0.252799 | 3_2:+65080289 | None:intergenic |
| TGCTAATAGAATATTTATTT+AGG | 0.263995 | 3_2:-65077667 | Msa0417770:three_prime_UTR |
| TTCTACTGCAGTTGGATTAT+GGG | 0.266499 | 3_2:-65079162 | Msa0417770:CDS |
| ATTATCACACCATTTGATTC+AGG | 0.274906 | 3_2:+65080768 | None:intergenic |
| CTACCAAAATCTCTGCTAAA+TGG | 0.289300 | 3_2:-65081024 | Msa0417770:CDS |
| CATTGAAACTTGCTTGTCTA+AGG | 0.304646 | 3_2:+65080394 | None:intergenic |
| GGAAGCACCTTCACTGGAAT+TGG | 0.335761 | 3_2:+65080310 | None:intergenic |
| CAAGAGAATGAATTAGTCTA+TGG | 0.335999 | 3_2:+65081151 | None:intergenic |
| TATGCGTTGCGTCGTTTGAT+TGG | 0.338393 | 3_2:-65078013 | Msa0417770:CDS |
| TCACTTGGTTCATGGTTCAT+TGG | 0.354905 | 3_2:-65078251 | Msa0417770:CDS |
| AACAACCATGCTACCTTGGC+TGG | 0.359668 | 3_2:+65077486 | None:intergenic |
| AAATACTTCCGACACGCAAC+CGG | 0.363576 | 3_2:-65078682 | Msa0417770:CDS |
| AGTACCATGAACCTGAGTTT+TGG | 0.369686 | 3_2:-65078726 | Msa0417770:CDS |
| AAGACGTTTCACTTGGTTCA+TGG | 0.370236 | 3_2:-65078259 | Msa0417770:CDS |
| ATATGCAATCTCTAAGGATT+TGG | 0.370357 | 3_2:-65078653 | Msa0417770:CDS |
| TTCTCAAATCCGAAATGTTC+CGG | 0.383366 | 3_2:+65077829 | None:intergenic |
| AACATCAGTTTGATCTGATT+CGG | 0.385925 | 3_2:-65077519 | Msa0417770:three_prime_UTR |
| TTGTGATGAGCATGCCAATA+AGG | 0.386549 | 3_2:+65080975 | None:intergenic |
| CTTCTTGGAAGCACCTTCAC+TGG | 0.386928 | 3_2:+65080304 | None:intergenic |
| AGTTATAGATATTGGAACTT+TGG | 0.389787 | 3_2:+65081119 | None:intergenic |
| TTGTTATCAGATTCATGATT+GGG | 0.391646 | 3_2:-65079966 | Msa0417770:CDS |
| TACATTGGGTGTATGAAATC+TGG | 0.398028 | 3_2:-65078916 | Msa0417770:CDS |
| TTTGTTGCTCTTAGGTGTCT+TGG | 0.401003 | 3_2:-65078977 | Msa0417770:intron |
| GCAGATATATGCAATCTCTA+AGG | 0.418280 | 3_2:-65078659 | Msa0417770:CDS |
| AGGTGAACAACTTCTTCAAT+TGG | 0.419854 | 3_2:-65080004 | Msa0417770:CDS |
| AATTCATTCATGTCATCCTT+AGG | 0.423227 | 3_2:+65080553 | None:intergenic |
| AAGAAGGCGTTTATAGTGAT+AGG | 0.439791 | 3_2:-65080281 | Msa0417770:CDS |
| ACTTCCAAAACTCAGGTTCA+TGG | 0.442847 | 3_2:+65078722 | None:intergenic |
| TTGTGAGTTAGATGAAGAAT+TGG | 0.445177 | 3_2:+65081080 | None:intergenic |
| AAATTGCAGCCGGAACATTT+CGG | 0.450970 | 3_2:-65077838 | Msa0417770:three_prime_UTR |
| GCAAGTTTCAATGCTGCAAA+TGG | 0.451916 | 3_2:-65080384 | Msa0417770:CDS |
| ATCTTATAGCAACATGTTGA+AGG | 0.454177 | 3_2:-65079221 | Msa0417770:intron |
| CTTCAATTGGAACGGGAGAA+AGG | 0.459349 | 3_2:-65079991 | Msa0417770:CDS |
| ATTGTTATCAGATTCATGAT+TGG | 0.460329 | 3_2:-65079967 | Msa0417770:CDS |
| TATAGATATTGGAACTTTGG+TGG | 0.467701 | 3_2:+65081122 | None:intergenic |
| TCTCGCGAAAAGAACTCAAC+TGG | 0.473406 | 3_2:-65080341 | Msa0417770:CDS |
| ACAACTTCTTCAATTGGAAC+GGG | 0.474792 | 3_2:-65079998 | Msa0417770:CDS |
| GTGAAGGAGATGGAGCTGTT+TGG | 0.475424 | 3_2:-65077932 | Msa0417770:CDS |
| TAAACACAGCTTTCAGTAGC+AGG | 0.475599 | 3_2:-65080256 | Msa0417770:CDS |
| ATAGATATTGGAACTTTGGT+GGG | 0.487001 | 3_2:+65081123 | None:intergenic |
| GATATGTATAATAGCTATAG+AGG | 0.487997 | 3_2:-65077690 | Msa0417770:three_prime_UTR |
| ACTTACTTTCGAGATAAAAC+AGG | 0.497626 | 3_2:+65078892 | None:intergenic |
| AGCACGATCTAGAATGCTGT+TGG | 0.503006 | 3_2:+65079371 | None:intergenic |
| GAGATTCAGTTAGAGAAACT+TGG | 0.507141 | 3_2:-65080226 | Msa0417770:CDS |
| ATGTGCTGTGGAACCCCTCC+AGG | 0.515746 | 3_2:-65078197 | Msa0417770:intron |
| GGGAAGCTTAGAGGCAAGGC+TGG | 0.516191 | 3_2:-65077765 | Msa0417770:three_prime_UTR |
| CAAAACCCAGGGTCTACATT+GGG | 0.517449 | 3_2:-65078930 | Msa0417770:CDS |
| TCTCCAAACTTCCAAAACTC+AGG | 0.522925 | 3_2:+65078715 | None:intergenic |
| AACAACTTCTTCAATTGGAA+CGG | 0.527310 | 3_2:-65079999 | Msa0417770:CDS |
| CCCGTCATCGTTCAAAACCC+AGG | 0.528161 | 3_2:-65078942 | Msa0417770:CDS |
| GCGAATGAAGACGTTTCACT+TGG | 0.528259 | 3_2:-65078266 | Msa0417770:CDS |
| TATGCTTAACGAATAATACT+AGG | 0.533520 | 3_2:-65077418 | Msa0417770:three_prime_UTR |
| TCAAAATGTGGTGAAGGAGA+TGG | 0.536110 | 3_2:-65077942 | Msa0417770:CDS |
| TAGCAACAACCATGCTACCT+TGG | 0.536229 | 3_2:+65077482 | None:intergenic |
| CTGGTTAATGGAAATGTAAG+TGG | 0.540832 | 3_2:+65078630 | None:intergenic |
| AGCACCTTCACTGGAATTGG+TGG | 0.541646 | 3_2:+65080313 | None:intergenic |
| CTACTTGTTTAAATTGCAGC+CGG | 0.548236 | 3_2:-65077848 | Msa0417770:three_prime_UTR |
| TTGTGGGAAGCTTAGAGGCA+AGG | 0.553054 | 3_2:-65077769 | Msa0417770:three_prime_UTR |
| TCAAAACCCAGGGTCTACAT+TGG | 0.553999 | 3_2:-65078931 | Msa0417770:CDS |
| TCAGATTCATGATTGGGCAC+AGG | 0.555114 | 3_2:-65079960 | Msa0417770:intron |
| CATACACCCAATGTAGACCC+TGG | 0.557481 | 3_2:+65078924 | None:intergenic |
| GGATTGTGATGTGACCAAAA+AGG | 0.561138 | 3_2:-65080700 | Msa0417770:intron |
| ATACACCCAATGTAGACCCT+GGG | 0.565448 | 3_2:+65078925 | None:intergenic |
| ACACAAAGACTTCCTTCGCC+TGG | 0.566057 | 3_2:-65079328 | Msa0417770:intron |
| ACAGAAGCAGGAAAAGCCTA+AGG | 0.573076 | 3_2:-65080569 | Msa0417770:intron |
| TCGTTTGATTGGAGCTGCAG+TGG | 0.574832 | 3_2:-65078002 | Msa0417770:CDS |
| TCGGCCACCAATTCCAGTGA+AGG | 0.575721 | 3_2:-65080317 | Msa0417770:CDS |
| CTTCAAGTATATACCTGGAG+GGG | 0.576115 | 3_2:+65078184 | None:intergenic |
| TGGGAGCAACCTGAATCAAA+TGG | 0.578936 | 3_2:-65080777 | Msa0417770:CDS |
| AGATAAGAATTGCATGAATG+TGG | 0.580067 | 3_2:-65077735 | Msa0417770:three_prime_UTR |
| AGAGATTGCATATATCTGCC+CGG | 0.580156 | 3_2:+65078663 | None:intergenic |
| TTTAGATTTATATCCAAAGG+AGG | 0.588798 | 3_2:-65077899 | Msa0417770:exon |
| TGTGAGTGGAAGGCACAGGC+AGG | 0.591576 | 3_2:-65078041 | Msa0417770:CDS |
| TGATCTGCCTTACCAGGCGA+AGG | 0.594114 | 3_2:+65079316 | None:intergenic |
| CAGTGGAATCTGCAAGTCAG+TGG | 0.594378 | 3_2:-65077985 | Msa0417770:CDS |
| ATTGCCCAGCCAAGGTAGCA+TGG | 0.594647 | 3_2:-65077491 | Msa0417770:three_prime_UTR |
| AATACTTCCGACACGCAACC+GGG | 0.596160 | 3_2:-65078681 | Msa0417770:CDS |
| ACAACCATGCTACCTTGGCT+GGG | 0.597036 | 3_2:+65077487 | None:intergenic |
| CGGACTCAATTGCCCAGCCA+AGG | 0.599095 | 3_2:-65077499 | Msa0417770:three_prime_UTR |
| TTGGCATGCTCATCACAACT+AGG | 0.601796 | 3_2:-65080970 | Msa0417770:intron |
| GCTTCAAGTATATACCTGGA+GGG | 0.604128 | 3_2:+65078183 | None:intergenic |
| CCGTCATCGTTCAAAACCCA+GGG | 0.605180 | 3_2:-65078941 | Msa0417770:CDS |
| AGAGAAACTTGGATGCCTCA+AGG | 0.605462 | 3_2:-65080215 | Msa0417770:intron |
| GATGAGCATGCCAATAAGGA+AGG | 0.608946 | 3_2:+65080979 | None:intergenic |
| ATATCTGCCCGGTTGCGTGT+CGG | 0.614366 | 3_2:+65078674 | None:intergenic |
| CGAAAAGAACTCAACTGGCT+CGG | 0.614371 | 3_2:-65080336 | Msa0417770:CDS |
| AGGTGCTTCCAAGAAGAAGA+AGG | 0.624772 | 3_2:-65080297 | Msa0417770:CDS |
| TTGTGCAGACTGTGAGTGGA+AGG | 0.630863 | 3_2:-65078051 | Msa0417770:intron |
| AGACTGTGAGTGGAAGGCAC+AGG | 0.631807 | 3_2:-65078045 | Msa0417770:CDS |
| GTGCACTCAAAATGTGGTGA+AGG | 0.632410 | 3_2:-65077948 | Msa0417770:CDS |
| AAATATGTGCACTCAAAATG+TGG | 0.634913 | 3_2:-65077954 | Msa0417770:CDS |
| TAAGAATTGCATGAATGTGG+AGG | 0.638200 | 3_2:-65077732 | Msa0417770:three_prime_UTR |
| AATGTTGTGCAGACTGTGAG+TGG | 0.643243 | 3_2:-65078055 | Msa0417770:intron |
| GATGACCGCAGTATGTGCTG+TGG | 0.707092 | 3_2:-65078209 | Msa0417770:CDS |
| AGAACTTCAAGTGATCTCTG+AGG | 0.721031 | 3_2:-65080721 | Msa0417770:CDS |
| GGGTTCCACAGCACATACTG+CGG | 0.739920 | 3_2:+65078204 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTTGATTTTTAATTTCT+TGG | - | chr3_2:65078234-65078253 | Msa0417770:CDS | 10.0% |
| !!! | TAATCATCTTTAAATTTTTT+AGG | + | chr3_2:65080520-65080539 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTTTTGTAGC+AGG | - | chr3_2:65077857-65077876 | Msa0417770:three_prime_UTR | 15.0% |
| !!! | TTTTTTATCCCTATTTTTAA+GGG | - | chr3_2:65078567-65078586 | Msa0417770:intron | 15.0% |
| !!! | TAATATAGTCTATATGATTT+TGG | - | chr3_2:65078723-65078742 | Msa0417770:CDS | 15.0% |
| !!! | AAAAAATATGTTCTTGTTTT+GGG | - | chr3_2:65078911-65078930 | Msa0417770:CDS | 15.0% |
| !! | TAAGAAAGAATATTATATGT+CGG | + | chr3_2:65080312-65080331 | None:intergenic | 15.0% |
| !! | AAAAATTACAAATTTCATTG+AGG | - | chr3_2:65080334-65080353 | Msa0417770:CDS | 15.0% |
| !!! | TATTTTAGATTTATATCCAA+AGG | - | chr3_2:65080758-65080777 | Msa0417770:CDS | 15.0% |
| !! | TGCTAATAGAATATTTATTT+AGG | - | chr3_2:65080993-65081012 | Msa0417770:CDS | 15.0% |
| !! | TATGTTATCCCTTTAATATT+GGG | - | chr3_2:65078497-65078516 | Msa0417770:intron | 20.0% |
| !!! | GTTTTTTATCCCTATTTTTA+AGG | - | chr3_2:65078566-65078585 | Msa0417770:intron | 20.0% |
| !! | GAAATTACCAAAACAAAATT+TGG | - | chr3_2:65078760-65078779 | Msa0417770:intron | 20.0% |
| !! | CATTATACTCCTAATTTATT+TGG | + | chr3_2:65078818-65078837 | None:intergenic | 20.0% |
| !!! | CAAAAAATATGTTCTTGTTT+TGG | - | chr3_2:65078910-65078929 | Msa0417770:CDS | 20.0% |
| !!! | ATGTGTAAAACTAAGTATTT+TGG | - | chr3_2:65079021-65079040 | Msa0417770:intron | 20.0% |
| !! | TTTATTGTGTGAGAAAAATA+TGG | - | chr3_2:65079380-65079399 | Msa0417770:CDS | 20.0% |
| !! | TGAGAAAAATATGGATAATT+TGG | - | chr3_2:65079389-65079408 | Msa0417770:intron | 20.0% |
| !!! | ATGAATTAGTCTATGGTTTT+TGG | + | chr3_2:65077505-65077524 | None:intergenic | 25.0% |
| ! | AGTTATAGATATTGGAACTT+TGG | + | chr3_2:65077544-65077563 | None:intergenic | 25.0% |
| ! | GAAGAAGAAGTTATAGATAT+TGG | + | chr3_2:65077552-65077571 | None:intergenic | 25.0% |
| ! | AAGGAAAAAACAGAGAAAAT+TGG | + | chr3_2:65077665-65077684 | None:intergenic | 25.0% |
| ! | TTGATGAAAAAACAAGAAGT+GGG | + | chr3_2:65077730-65077749 | None:intergenic | 25.0% |
| ! | ATTGATGAAAAAACAAGAAG+TGG | + | chr3_2:65077731-65077750 | None:intergenic | 25.0% |
| !! | TTGGTTTGAAATCAAAATCA+TGG | - | chr3_2:65077779-65077798 | Msa0417770:three_prime_UTR | 25.0% |
| !! | TGGTTTGAAATCAAAATCAT+GGG | - | chr3_2:65077780-65077799 | Msa0417770:three_prime_UTR | 25.0% |
| ! | TGAACTTTATGATCTGATTT+AGG | - | chr3_2:65077827-65077846 | Msa0417770:three_prime_UTR | 25.0% |
| !!! | GTGTGTTATTTTTGCTTTTT+TGG | - | chr3_2:65078038-65078057 | Msa0417770:CDS | 25.0% |
| ! | AAGAAACAAATCTAGCTAAA+AGG | + | chr3_2:65078181-65078200 | None:intergenic | 25.0% |
| !!! | TTTTTAATTTCTTGGATTCC+AGG | - | chr3_2:65078242-65078261 | Msa0417770:CDS | 25.0% |
| !!! | TTTTAATTTCTTGGATTCCA+GGG | - | chr3_2:65078243-65078262 | Msa0417770:CDS | 25.0% |
| ! | AAATTGAGTCAAAGTAAGAT+AGG | + | chr3_2:65078475-65078494 | None:intergenic | 25.0% |
| ! | TATCTTACTTTGACTCAATT+TGG | - | chr3_2:65078474-65078493 | Msa0417770:intron | 25.0% |
| ! | GTATGTTATCCCTTTAATAT+TGG | - | chr3_2:65078496-65078515 | Msa0417770:intron | 25.0% |
| ! | TTCTTCATCCCAATATTAAA+GGG | + | chr3_2:65078508-65078527 | None:intergenic | 25.0% |
| ! | ATTCTTCATCCCAATATTAA+AGG | + | chr3_2:65078509-65078528 | None:intergenic | 25.0% |
| ! | AAATAGGGATAAAAAACTCA+AGG | + | chr3_2:65078563-65078582 | None:intergenic | 25.0% |
| ! | ATCGATGAGTTTAATTATGA+TGG | - | chr3_2:65078590-65078609 | Msa0417770:intron | 25.0% |
| ! | TCGATGAGTTTAATTATGAT+GGG | - | chr3_2:65078591-65078610 | Msa0417770:intron | 25.0% |
| ! | ATTGTTATCAGATTCATGAT+TGG | - | chr3_2:65078693-65078712 | Msa0417770:CDS | 25.0% |
| ! | TTGTTATCAGATTCATGATT+GGG | - | chr3_2:65078694-65078713 | Msa0417770:CDS | 25.0% |
| !!! | AATCACACCAAATTTTGTTT+TGG | + | chr3_2:65078770-65078789 | None:intergenic | 25.0% |
| !!! | AACAAAATTTGGTGTGATTT+AGG | - | chr3_2:65078771-65078790 | Msa0417770:intron | 25.0% |
| ! | TTAGGAGATAATAACAATGA+AGG | - | chr3_2:65078789-65078808 | Msa0417770:intron | 25.0% |
| !! | TTTCAAAGTGACTTATGTTT+TGG | + | chr3_2:65078994-65079013 | None:intergenic | 25.0% |
| ! | AGAAAAACAAAGAACTGTAA+CGG | + | chr3_2:65079165-65079184 | None:intergenic | 25.0% |
| ! | ACATGATCTGATCATTTATA+TGG | - | chr3_2:65079209-65079228 | Msa0417770:CDS | 25.0% |
| ! | CATGATCTGATCATTTATAT+GGG | - | chr3_2:65079210-65079229 | Msa0417770:CDS | 25.0% |
| ! | TTTATATGGGTTCTACTTAA+TGG | - | chr3_2:65079223-65079242 | Msa0417770:intron | 25.0% |
| !!! | TTTGGCTTAATTTTGACATT+TGG | - | chr3_2:65079407-65079426 | Msa0417770:intron | 25.0% |
| ! | TTTAGGTATATATCTGTCTT+AGG | - | chr3_2:65079564-65079583 | Msa0417770:intron | 25.0% |
| ! | TAAAGGTTTAAAAGAAACGA+TGG | + | chr3_2:65079616-65079635 | None:intergenic | 25.0% |
| !!! | TTATTTTTTTGGGGGAAATA+GGG | + | chr3_2:65079652-65079671 | None:intergenic | 25.0% |
| ! | TTCGCATATTTGTGTAAAAT+TGG | + | chr3_2:65080379-65080398 | None:intergenic | 25.0% |
| ! | TTTAGATTTATATCCAAAGG+AGG | - | chr3_2:65080761-65080780 | Msa0417770:CDS | 25.0% |
| !!! | TATAACATTGACCATTTTTG+TGG | - | chr3_2:65080874-65080893 | Msa0417770:intron | 25.0% |
| !!! | ATAACATTGACCATTTTTGT+GGG | - | chr3_2:65080875-65080894 | Msa0417770:intron | 25.0% |
| ! | GATATGTATAATAGCTATAG+AGG | - | chr3_2:65080970-65080989 | Msa0417770:intron | 25.0% |
| ! | TATGCTTAACGAATAATACT+AGG | - | chr3_2:65081242-65081261 | Msa0417770:five_prime_UTR | 25.0% |
| ! | CAAGAGAATGAATTAGTCTA+TGG | + | chr3_2:65077512-65077531 | None:intergenic | 30.0% |
| ATAGATATTGGAACTTTGGT+GGG | + | chr3_2:65077540-65077559 | None:intergenic | 30.0% | |
| TATAGATATTGGAACTTTGG+TGG | + | chr3_2:65077541-65077560 | None:intergenic | 30.0% | |
| TTGTGAGTTAGATGAAGAAT+TGG | + | chr3_2:65077583-65077602 | None:intergenic | 30.0% | |
| ! | AATCCATTTAGCAGAGATTT+TGG | + | chr3_2:65077642-65077661 | None:intergenic | 30.0% |
| !!! | TCTGTTTTTTCCTTCCTTAT+TGG | - | chr3_2:65077671-65077690 | Msa0417770:three_prime_UTR | 30.0% |
| ! | TTTTGTGTTGTGTGTGATTT+TGG | - | chr3_2:65077760-65077779 | Msa0417770:three_prime_UTR | 30.0% |
| ! | GGTTTGAAATCAAAATCATG+GGG | - | chr3_2:65077781-65077800 | Msa0417770:three_prime_UTR | 30.0% |
| !!! | TTTTTTTTTGTAGCAGGATG+TGG | - | chr3_2:65077863-65077882 | Msa0417770:three_prime_UTR | 30.0% |
| !!! | TTTTTTTTGTAGCAGGATGT+GGG | - | chr3_2:65077864-65077883 | Msa0417770:three_prime_UTR | 30.0% |
| ATTATCACACCATTTGATTC+AGG | + | chr3_2:65077895-65077914 | None:intergenic | 30.0% | |
| ! | TAATCAACCACATACCTTTT+TGG | + | chr3_2:65077977-65077996 | None:intergenic | 30.0% |
| GTTATTCCAAAAAAGTGGTA+GGG | + | chr3_2:65078073-65078092 | None:intergenic | 30.0% | |
| TGTTATTCCAAAAAAGTGGT+AGG | + | chr3_2:65078074-65078093 | None:intergenic | 30.0% | |
| CTTCTGTTATTCCAAAAAAG+TGG | + | chr3_2:65078078-65078097 | None:intergenic | 30.0% | |
| !!! | TTTTTTGGAATAACAGAAGC+AGG | - | chr3_2:65078079-65078098 | Msa0417770:intron | 30.0% |
| AATTCATTCATGTCATCCTT+AGG | + | chr3_2:65078110-65078129 | None:intergenic | 30.0% | |
| CAAATCTAGCTAAAAGGAAA+TGG | + | chr3_2:65078175-65078194 | None:intergenic | 30.0% | |
| ATATTGGGATGAAGAATTTG+AGG | - | chr3_2:65078512-65078531 | Msa0417770:intron | 30.0% | |
| TCATCGATCCCTTAAAAATA+GGG | + | chr3_2:65078578-65078597 | None:intergenic | 30.0% | |
| !! | TTTGTTCTTCCATTTTGATC+AGG | - | chr3_2:65078636-65078655 | Msa0417770:CDS | 30.0% |
| AACAACTTCTTCAATTGGAA+CGG | - | chr3_2:65078661-65078680 | Msa0417770:CDS | 30.0% | |
| TGAAGGTGACCAAATAAATT+AGG | - | chr3_2:65078806-65078825 | Msa0417770:intron | 30.0% | |
| ! | TTCATAGTTCTTTGAGTTTG+AGG | + | chr3_2:65079094-65079113 | None:intergenic | 30.0% |
| GAAAAACAAAGAACTGTAAC+GGG | + | chr3_2:65079164-65079183 | None:intergenic | 30.0% | |
| TGATCAGATCATGTAGTAAT+TGG | + | chr3_2:65079203-65079222 | None:intergenic | 30.0% | |
| ATCTTATAGCAACATGTTGA+AGG | - | chr3_2:65079439-65079458 | Msa0417770:intron | 30.0% | |
| ! | ATTTTCTTTTCTACTGCAGT+TGG | - | chr3_2:65079490-65079509 | Msa0417770:intron | 30.0% |
| !!! | GTTATTTTTTTGGGGGAAAT+AGG | + | chr3_2:65079653-65079672 | None:intergenic | 30.0% |
| !!! | AAGAGCGGAGTTATTTTTTT+GGG | + | chr3_2:65079662-65079681 | None:intergenic | 30.0% |
| ACTTACTTTCGAGATAAAAC+AGG | + | chr3_2:65079771-65079790 | None:intergenic | 30.0% | |
| !! | ACGTTGTTTCTGCATTTATA+GGG | - | chr3_2:65079905-65079924 | Msa0417770:intron | 30.0% |
| ! | ATATGCAATCTCTAAGGATT+TGG | - | chr3_2:65080007-65080026 | Msa0417770:intron | 30.0% |
| !! | AACATATACGTACTGGTTAA+TGG | + | chr3_2:65080045-65080064 | None:intergenic | 30.0% |
| GTAAAGAAACATATACGTAC+TGG | + | chr3_2:65080052-65080071 | None:intergenic | 30.0% | |
| TCTTTACACAGTCCTTAATT+TGG | - | chr3_2:65080065-65080084 | Msa0417770:intron | 30.0% | |
| TTCCATTCAAAAATGATCCT+CGG | + | chr3_2:65080094-65080113 | None:intergenic | 30.0% | |
| ACAAGCTGAGATTTCATATT+TGG | + | chr3_2:65080246-65080265 | None:intergenic | 30.0% | |
| AAATATGTGCACTCAAAATG+TGG | - | chr3_2:65080706-65080725 | Msa0417770:CDS | 30.0% | |
| GAAAAAAAATCATCCTCCTT+TGG | + | chr3_2:65080777-65080796 | None:intergenic | 30.0% | |
| !!! | AAGGAGGATGATTTTTTTTC+TGG | - | chr3_2:65080777-65080796 | Msa0417770:CDS | 30.0% |
| AGATAAGAATTGCATGAATG+TGG | - | chr3_2:65080925-65080944 | Msa0417770:intron | 30.0% | |
| AACATCAGTTTGATCTGATT+CGG | - | chr3_2:65081141-65081160 | Msa0417770:five_prime_UTR | 30.0% | |
| CTACCAAAATCTCTGCTAAA+TGG | - | chr3_2:65077636-65077655 | Msa0417770:three_prime_UTR | 35.0% | |
| !!! | AGTAAACCCTACCACTTTTT+TGG | - | chr3_2:65078064-65078083 | Msa0417770:intron | 35.0% |
| ! | CATTGAAACTTGCTTGTCTA+AGG | + | chr3_2:65078269-65078288 | None:intergenic | 35.0% |
| TATAAACGCCTTCTTCTTCT+TGG | + | chr3_2:65078374-65078393 | None:intergenic | 35.0% | |
| !! | AAGAAGGCGTTTATAGTGAT+AGG | - | chr3_2:65078379-65078398 | Msa0417770:intron | 35.0% |
| GAGATTCAGTTAGAGAAACT+TGG | - | chr3_2:65078434-65078453 | Msa0417770:intron | 35.0% | |
| AGTAAGATAGGTTTACCTTG+AGG | + | chr3_2:65078463-65078482 | None:intergenic | 35.0% | |
| CTCAAGGATAACTAACGTTA+AGG | + | chr3_2:65078547-65078566 | None:intergenic | 35.0% | |
| CTCATCGATCCCTTAAAAAT+AGG | + | chr3_2:65078579-65078598 | None:intergenic | 35.0% | |
| AGTTGTTCACCTGATCAAAA+TGG | + | chr3_2:65078648-65078667 | None:intergenic | 35.0% | |
| AGGTGAACAACTTCTTCAAT+TGG | - | chr3_2:65078656-65078675 | Msa0417770:CDS | 35.0% | |
| ACAACTTCTTCAATTGGAAC+GGG | - | chr3_2:65078662-65078681 | Msa0417770:CDS | 35.0% | |
| ACTATGAATGCCTGCAAAAA+TGG | - | chr3_2:65079106-65079125 | Msa0417770:intron | 35.0% | |
| CTTGTATGACCAATATCACT+TGG | - | chr3_2:65079129-65079148 | Msa0417770:CDS | 35.0% | |
| AAGTTGCACTGAAACAACAA+TGG | + | chr3_2:65079269-65079288 | None:intergenic | 35.0% | |
| TTTCTACTGCAGTTGGATTA+TGG | - | chr3_2:65079497-65079516 | Msa0417770:intron | 35.0% | |
| TTCTACTGCAGTTGGATTAT+GGG | - | chr3_2:65079498-65079517 | Msa0417770:intron | 35.0% | |
| GACGATGTTCATGTCAATTT+AGG | - | chr3_2:65079547-65079566 | Msa0417770:intron | 35.0% | |
| !!! | AGAGCGGAGTTATTTTTTTG+GGG | + | chr3_2:65079661-65079680 | None:intergenic | 35.0% |
| !!! | GAAGAGCGGAGTTATTTTTT+TGG | + | chr3_2:65079663-65079682 | None:intergenic | 35.0% |
| TACATTGGGTGTATGAAATC+TGG | - | chr3_2:65079744-65079763 | Msa0417770:intron | 35.0% | |
| TATCTCGAAAGTAAGTACAC+TGG | - | chr3_2:65079775-65079794 | Msa0417770:intron | 35.0% | |
| AAAGTAAGTACACTGGATTC+TGG | - | chr3_2:65079782-65079801 | Msa0417770:intron | 35.0% | |
| ACACTGGATTCTGGATTATT+TGG | - | chr3_2:65079791-65079810 | Msa0417770:intron | 35.0% | |
| !!! | TTATTTTTGTCTGAACCCTC+CGG | + | chr3_2:65079835-65079854 | None:intergenic | 35.0% |
| ATAAGCATTAAGCCACAATC+AGG | + | chr3_2:65079876-65079895 | None:intergenic | 35.0% | |
| TGCAGAAACAACGTCAAAAA+TGG | + | chr3_2:65079899-65079918 | None:intergenic | 35.0% | |
| !! | GACGTTGTTTCTGCATTTAT+AGG | - | chr3_2:65079904-65079923 | Msa0417770:intron | 35.0% |
| !! | TTTTGGAAGTTTGGAGAAGA+GGG | - | chr3_2:65079951-65079970 | Msa0417770:intron | 35.0% |
| GCAGATATATGCAATCTCTA+AGG | - | chr3_2:65080001-65080020 | Msa0417770:CDS | 35.0% | |
| CTGGTTAATGGAAATGTAAG+TGG | + | chr3_2:65080033-65080052 | None:intergenic | 35.0% | |
| !! | AACCGAGGATCATTTTTGAA+TGG | - | chr3_2:65080089-65080108 | Msa0417770:intron | 35.0% |
| ! | GATAGTCCTGCAGATTTTAT+TGG | - | chr3_2:65080153-65080172 | Msa0417770:intron | 35.0% |
| TTGCTTCCAATAAAATCTGC+AGG | + | chr3_2:65080162-65080181 | None:intergenic | 35.0% | |
| !! | TCTTGCTGGTTCTATTATCA+AGG | + | chr3_2:65080277-65080296 | None:intergenic | 35.0% |
| GGATACATAAAGATTCTTGC+TGG | + | chr3_2:65080291-65080310 | None:intergenic | 35.0% | |
| GATTGCTTCAAGTATATACC+TGG | + | chr3_2:65080484-65080503 | None:intergenic | 35.0% | |
| CTACTTGTTTAAATTGCAGC+CGG | - | chr3_2:65080812-65080831 | Msa0417770:intron | 35.0% | |
| TTCTCAAATCCGAAATGTTC+CGG | + | chr3_2:65080834-65080853 | None:intergenic | 35.0% | |
| TAAGAATTGCATGAATGTGG+AGG | - | chr3_2:65080928-65080947 | Msa0417770:intron | 35.0% | |
| !! | AATGTGGAGGATTTTAGCAT+GGG | - | chr3_2:65080941-65080960 | Msa0417770:intron | 35.0% |
| TTGTGATGAGCATGCCAATA+AGG | + | chr3_2:65077688-65077707 | None:intergenic | 40.0% | |
| AGAACTTCAAGTGATCTCTG+AGG | - | chr3_2:65077939-65077958 | Msa0417770:CDS | 40.0% | |
| GGATTGTGATGTGACCAAAA+AGG | - | chr3_2:65077960-65077979 | Msa0417770:CDS | 40.0% | |
| ! | GATGTGACCAAAAAGGTATG+TGG | - | chr3_2:65077967-65077986 | Msa0417770:CDS | 40.0% |
| GCAAGTTTCAATGCTGCAAA+TGG | - | chr3_2:65078276-65078295 | Msa0417770:CDS | 40.0% | |
| TAAACACAGCTTTCAGTAGC+AGG | - | chr3_2:65078404-65078423 | Msa0417770:intron | 40.0% | |
| !!! | GTCATACAAGCCATTTTTGC+AGG | + | chr3_2:65079119-65079138 | None:intergenic | 40.0% |
| GAATAATGATCTGCCTTACC+AGG | + | chr3_2:65079353-65079372 | None:intergenic | 40.0% | |
| !!! | GAGCGGAGTTATTTTTTTGG+GGG | + | chr3_2:65079660-65079679 | None:intergenic | 40.0% |
| CTAAGAGCAACAAAGAAGAG+CGG | + | chr3_2:65079677-65079696 | None:intergenic | 40.0% | |
| TTTGTTGCTCTTAGGTGTCT+TGG | - | chr3_2:65079683-65079702 | Msa0417770:intron | 40.0% | |
| CTGGATTCTGGATTATTTGG+AGG | - | chr3_2:65079794-65079813 | Msa0417770:intron | 40.0% | |
| ! | AGTACCATGAACCTGAGTTT+TGG | - | chr3_2:65079934-65079953 | Msa0417770:intron | 40.0% |
| ACTTCCAAAACTCAGGTTCA+TGG | + | chr3_2:65079941-65079960 | None:intergenic | 40.0% | |
| !!! | GAACCTGAGTTTTGGAAGTT+TGG | - | chr3_2:65079942-65079961 | Msa0417770:intron | 40.0% |
| TCTCCAAACTTCCAAAACTC+AGG | + | chr3_2:65079948-65079967 | None:intergenic | 40.0% | |
| !!! | GTTTTGGAAGTTTGGAGAAG+AGG | - | chr3_2:65079950-65079969 | Msa0417770:intron | 40.0% |
| AGAGATTGCATATATCTGCC+CGG | + | chr3_2:65080000-65080019 | None:intergenic | 40.0% | |
| ! | ATTGGCCTGCAATCATAATG+AGG | + | chr3_2:65080361-65080380 | None:intergenic | 40.0% |
| AAGACGTTTCACTTGGTTCA+TGG | - | chr3_2:65080401-65080420 | Msa0417770:intron | 40.0% | |
| TCACTTGGTTCATGGTTCAT+TGG | - | chr3_2:65080409-65080428 | Msa0417770:intron | 40.0% | |
| CTTCAAGTATATACCTGGAG+GGG | + | chr3_2:65080479-65080498 | None:intergenic | 40.0% | |
| GCTTCAAGTATATACCTGGA+GGG | + | chr3_2:65080480-65080499 | None:intergenic | 40.0% | |
| TGCTTCAAGTATATACCTGG+AGG | + | chr3_2:65080481-65080500 | None:intergenic | 40.0% | |
| TCAAAATGTGGTGAAGGAGA+TGG | - | chr3_2:65080718-65080737 | Msa0417770:CDS | 40.0% | |
| AAATTGCAGCCGGAACATTT+CGG | - | chr3_2:65080822-65080841 | Msa0417770:intron | 40.0% | |
| CTCTAAGCTTCCCACAAAAA+TGG | + | chr3_2:65080888-65080907 | None:intergenic | 40.0% | |
| ! | CATTTTTGTGGGAAGCTTAG+AGG | - | chr3_2:65080886-65080905 | Msa0417770:intron | 40.0% |
| !! | GAATGTGGAGGATTTTAGCA+TGG | - | chr3_2:65080940-65080959 | Msa0417770:intron | 40.0% |
| !! | ATGTGGAGGATTTTAGCATG+GGG | - | chr3_2:65080942-65080961 | Msa0417770:intron | 40.0% |
| GATGAGCATGCCAATAAGGA+AGG | + | chr3_2:65077684-65077703 | None:intergenic | 45.0% | |
| TTGGCATGCTCATCACAACT+AGG | - | chr3_2:65077690-65077709 | Msa0417770:three_prime_UTR | 45.0% | |
| TGGGAGCAACCTGAATCAAA+TGG | - | chr3_2:65077883-65077902 | Msa0417770:three_prime_UTR | 45.0% | |
| ACAGAAGCAGGAAAAGCCTA+AGG | - | chr3_2:65078091-65078110 | Msa0417770:intron | 45.0% | |
| TCTCGCGAAAAGAACTCAAC+TGG | - | chr3_2:65078319-65078338 | Msa0417770:intron | 45.0% | |
| CGAAAAGAACTCAACTGGCT+CGG | - | chr3_2:65078324-65078343 | Msa0417770:intron | 45.0% | |
| AGGTGCTTCCAAGAAGAAGA+AGG | - | chr3_2:65078363-65078382 | Msa0417770:intron | 45.0% | |
| AGAGAAACTTGGATGCCTCA+AGG | - | chr3_2:65078445-65078464 | Msa0417770:intron | 45.0% | |
| CTTCAATTGGAACGGGAGAA+AGG | - | chr3_2:65078669-65078688 | Msa0417770:CDS | 45.0% | |
| TCAGATTCATGATTGGGCAC+AGG | - | chr3_2:65078700-65078719 | Msa0417770:CDS | 45.0% | |
| GACCAATATCACTTGGCAGT+TGG | - | chr3_2:65079136-65079155 | Msa0417770:CDS | 45.0% | |
| AGCCAACTGCCAAGTGATAT+TGG | + | chr3_2:65079141-65079160 | None:intergenic | 45.0% | |
| ! | AGCACGATCTAGAATGCTGT+TGG | + | chr3_2:65079292-65079311 | None:intergenic | 45.0% |
| AGGGCAGAGATAAGTGGTAA+AGG | + | chr3_2:65079633-65079652 | None:intergenic | 45.0% | |
| GGAAATAGGGCAGAGATAAG+TGG | + | chr3_2:65079639-65079658 | None:intergenic | 45.0% | |
| CGCTCTTCTTTGTTGCTCTT+AGG | - | chr3_2:65079675-65079694 | Msa0417770:intron | 45.0% | |
| !!! | TTTTGAACGATGACGGGCAA+GGG | + | chr3_2:65079715-65079734 | None:intergenic | 45.0% |
| TCAAAACCCAGGGTCTACAT+TGG | - | chr3_2:65079729-65079748 | Msa0417770:intron | 45.0% | |
| CAAAACCCAGGGTCTACATT+GGG | - | chr3_2:65079730-65079749 | Msa0417770:intron | 45.0% | |
| ATACACCCAATGTAGACCCT+GGG | + | chr3_2:65079738-65079757 | None:intergenic | 45.0% | |
| TTAAGCCACAATCAGGAGCA+TGG | + | chr3_2:65079869-65079888 | None:intergenic | 45.0% | |
| AAATACTTCCGACACGCAAC+CGG | - | chr3_2:65079978-65079997 | Msa0417770:CDS | 45.0% | |
| ! | AGTCCTTAATTTGGCAACCG+AGG | - | chr3_2:65080074-65080093 | Msa0417770:intron | 45.0% |
| GATCCTCGGTTGCCAAATTA+AGG | + | chr3_2:65080080-65080099 | None:intergenic | 45.0% | |
| GAGGTCCTCATTATGATTGC+AGG | - | chr3_2:65080353-65080372 | Msa0417770:CDS | 45.0% | |
| GCGAATGAAGACGTTTCACT+TGG | - | chr3_2:65080394-65080413 | Msa0417770:CDS | 45.0% | |
| AATGTTGTGCAGACTGTGAG+TGG | - | chr3_2:65080605-65080624 | Msa0417770:intron | 45.0% | |
| TATGCGTTGCGTCGTTTGAT+TGG | - | chr3_2:65080647-65080666 | Msa0417770:intron | 45.0% | |
| GTGCACTCAAAATGTGGTGA+AGG | - | chr3_2:65080712-65080731 | Msa0417770:CDS | 45.0% | |
| TAGCAACAACCATGCTACCT+TGG | + | chr3_2:65081181-65081200 | None:intergenic | 45.0% | |
| !!! | ATAATTTTCTTATATAAAAA+CGG | - | chr3_2:65077443-65077462 | Msa0417770:three_prime_UTR | 5.0% |
| ! | AACTTGCTTGTCTAAGGCCC+TGG | + | chr3_2:65078263-65078282 | None:intergenic | 50.0% |
| AGCACCTTCACTGGAATTGG+TGG | + | chr3_2:65078350-65078369 | None:intergenic | 50.0% | |
| !! | GGAAGCACCTTCACTGGAAT+TGG | + | chr3_2:65078353-65078372 | None:intergenic | 50.0% |
| !! | CTTCTTGGAAGCACCTTCAC+TGG | + | chr3_2:65078359-65078378 | None:intergenic | 50.0% |
| ACACAAAGACTTCCTTCGCC+TGG | - | chr3_2:65079332-65079351 | Msa0417770:CDS | 50.0% | |
| AAGACTTCCTTCGCCTGGTA+AGG | - | chr3_2:65079337-65079356 | Msa0417770:CDS | 50.0% | |
| !!! | GTTTTGAACGATGACGGGCA+AGG | + | chr3_2:65079716-65079735 | None:intergenic | 50.0% |
| !!! | CCTGGGTTTTGAACGATGAC+GGG | + | chr3_2:65079721-65079740 | None:intergenic | 50.0% |
| !!! | CCCTGGGTTTTGAACGATGA+CGG | + | chr3_2:65079722-65079741 | None:intergenic | 50.0% |
| CCGTCATCGTTCAAAACCCA+GGG | - | chr3_2:65079719-65079738 | Msa0417770:intron | 50.0% | |
| CATACACCCAATGTAGACCC+TGG | + | chr3_2:65079739-65079758 | None:intergenic | 50.0% | |
| CTCTTCCATGCTCCTGATTG+TGG | - | chr3_2:65079861-65079880 | Msa0417770:intron | 50.0% | |
| AATACTTCCGACACGCAACC+GGG | - | chr3_2:65079979-65079998 | Msa0417770:CDS | 50.0% | |
| TTGTGCAGACTGTGAGTGGA+AGG | - | chr3_2:65080609-65080628 | Msa0417770:intron | 50.0% | |
| TCGTTTGATTGGAGCTGCAG+TGG | - | chr3_2:65080658-65080677 | Msa0417770:intron | 50.0% | |
| CAGTGGAATCTGCAAGTCAG+TGG | - | chr3_2:65080675-65080694 | Msa0417770:intron | 50.0% | |
| GTGAAGGAGATGGAGCTGTT+TGG | - | chr3_2:65080728-65080747 | Msa0417770:CDS | 50.0% | |
| TTGTGGGAAGCTTAGAGGCA+AGG | - | chr3_2:65080891-65080910 | Msa0417770:intron | 50.0% | |
| !! | TGGAGGATTTTAGCATGGGG+TGG | - | chr3_2:65080945-65080964 | Msa0417770:intron | 50.0% |
| !! | GGAGGATTTTAGCATGGGGT+GGG | - | chr3_2:65080946-65080965 | Msa0417770:intron | 50.0% |
| !! | GAGGATTTTAGCATGGGGTG+GGG | - | chr3_2:65080947-65080966 | Msa0417770:intron | 50.0% |
| !! | AGGATTTTAGCATGGGGTGG+GGG | - | chr3_2:65080948-65080967 | Msa0417770:intron | 50.0% |
| ACAACCATGCTACCTTGGCT+GGG | + | chr3_2:65081176-65081195 | None:intergenic | 50.0% | |
| AACAACCATGCTACCTTGGC+TGG | + | chr3_2:65081177-65081196 | None:intergenic | 50.0% | |
| TCGGCCACCAATTCCAGTGA+AGG | - | chr3_2:65078343-65078362 | Msa0417770:intron | 55.0% | |
| TGATCTGCCTTACCAGGCGA+AGG | + | chr3_2:65079347-65079366 | None:intergenic | 55.0% | |
| CCCGTCATCGTTCAAAACCC+AGG | - | chr3_2:65079718-65079737 | Msa0417770:intron | 55.0% | |
| TCTGAACCCTCCGGCTTCTA+GGG | + | chr3_2:65079826-65079845 | None:intergenic | 55.0% | |
| ATATCTGCCCGGTTGCGTGT+CGG | + | chr3_2:65079989-65080008 | None:intergenic | 55.0% | |
| GATGACCGCAGTATGTGCTG+TGG | - | chr3_2:65080451-65080470 | Msa0417770:intron | 55.0% | |
| GGGTTCCACAGCACATACTG+CGG | + | chr3_2:65080459-65080478 | None:intergenic | 55.0% | |
| ! | AGACTGTGAGTGGAAGGCAC+AGG | - | chr3_2:65080615-65080634 | Msa0417770:intron | 55.0% |
| ATTGCCCAGCCAAGGTAGCA+TGG | - | chr3_2:65081169-65081188 | Msa0417770:five_prime_UTR | 55.0% | |
| GAGGCCTTTCCCCTAGAAGC+CGG | - | chr3_2:65079813-65079832 | Msa0417770:intron | 60.0% | |
| CCTTTCCCCTAGAAGCCGGA+GGG | - | chr3_2:65079817-65079836 | Msa0417770:intron | 60.0% | |
| CTGAACCCTCCGGCTTCTAG+GGG | + | chr3_2:65079825-65079844 | None:intergenic | 60.0% | |
| GTCTGAACCCTCCGGCTTCT+AGG | + | chr3_2:65079827-65079846 | None:intergenic | 60.0% | |
| ATGTGCTGTGGAACCCCTCC+AGG | - | chr3_2:65080463-65080482 | Msa0417770:intron | 60.0% | |
| ! | TGTGAGTGGAAGGCACAGGC+AGG | - | chr3_2:65080619-65080638 | Msa0417770:intron | 60.0% |
| GGGAAGCTTAGAGGCAAGGC+TGG | - | chr3_2:65080895-65080914 | Msa0417770:intron | 60.0% | |
| CGGACTCAATTGCCCAGCCA+AGG | - | chr3_2:65081161-65081180 | Msa0417770:five_prime_UTR | 60.0% | |
| GCCTTTCCCCTAGAAGCCGG+AGG | - | chr3_2:65079816-65079835 | Msa0417770:intron | 65.0% | |
| ! | CCCTCCGGCTTCTAGGGGAA+AGG | + | chr3_2:65079820-65079839 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 65077397 | 65081285 | 65077397 | ID=Msa0417770;Name=Msa0417770 |
| chr3_2 | mRNA | 65077397 | 65081285 | 65077397 | ID=Msa0417770-mRNA-1;Parent=Msa0417770;Name=Msa0417770-mRNA-1;_AED=0.09;_eAED=0.09;_QI=223|1|1|1|1|1|11|520|395 |
| chr3_2 | exon | 65077397 | 65078065 | 65077397 | ID=Msa0417770-mRNA-1:exon:14607;Parent=Msa0417770-mRNA-1 |
| chr3_2 | exon | 65078198 | 65078307 | 65078198 | ID=Msa0417770-mRNA-1:exon:14606;Parent=Msa0417770-mRNA-1 |
| chr3_2 | exon | 65078631 | 65078756 | 65078631 | ID=Msa0417770-mRNA-1:exon:14605;Parent=Msa0417770-mRNA-1 |
| chr3_2 | exon | 65078898 | 65078985 | 65078898 | ID=Msa0417770-mRNA-1:exon:14604;Parent=Msa0417770-mRNA-1 |
| chr3_2 | exon | 65079114 | 65079234 | 65079114 | ID=Msa0417770-mRNA-1:exon:14603;Parent=Msa0417770-mRNA-1 |
| chr3_2 | exon | 65079329 | 65079401 | 65079329 | ID=Msa0417770-mRNA-1:exon:14602;Parent=Msa0417770-mRNA-1 |
| chr3_2 | exon | 65079961 | 65080024 | 65079961 | ID=Msa0417770-mRNA-1:exon:14601;Parent=Msa0417770-mRNA-1 |
| chr3_2 | exon | 65080216 | 65080418 | 65080216 | ID=Msa0417770-mRNA-1:exon:14600;Parent=Msa0417770-mRNA-1 |
| chr3_2 | exon | 65080529 | 65080587 | 65080529 | ID=Msa0417770-mRNA-1:exon:14599;Parent=Msa0417770-mRNA-1 |
| chr3_2 | exon | 65080701 | 65080803 | 65080701 | ID=Msa0417770-mRNA-1:exon:14598;Parent=Msa0417770-mRNA-1 |
| chr3_2 | exon | 65080971 | 65081285 | 65080971 | ID=Msa0417770-mRNA-1:exon:14597;Parent=Msa0417770-mRNA-1 |
| chr3_2 | five_prime_UTR | 65081063 | 65081285 | 65081063 | ID=Msa0417770-mRNA-1:five_prime_utr;Parent=Msa0417770-mRNA-1 |
| chr3_2 | CDS | 65080971 | 65081062 | 65080971 | ID=Msa0417770-mRNA-1:cds;Parent=Msa0417770-mRNA-1 |
| chr3_2 | CDS | 65080701 | 65080803 | 65080701 | ID=Msa0417770-mRNA-1:cds;Parent=Msa0417770-mRNA-1 |
| chr3_2 | CDS | 65080529 | 65080587 | 65080529 | ID=Msa0417770-mRNA-1:cds;Parent=Msa0417770-mRNA-1 |
| chr3_2 | CDS | 65080216 | 65080418 | 65080216 | ID=Msa0417770-mRNA-1:cds;Parent=Msa0417770-mRNA-1 |
| chr3_2 | CDS | 65079961 | 65080024 | 65079961 | ID=Msa0417770-mRNA-1:cds;Parent=Msa0417770-mRNA-1 |
| chr3_2 | CDS | 65079329 | 65079401 | 65079329 | ID=Msa0417770-mRNA-1:cds;Parent=Msa0417770-mRNA-1 |
| chr3_2 | CDS | 65079114 | 65079234 | 65079114 | ID=Msa0417770-mRNA-1:cds;Parent=Msa0417770-mRNA-1 |
| chr3_2 | CDS | 65078898 | 65078985 | 65078898 | ID=Msa0417770-mRNA-1:cds;Parent=Msa0417770-mRNA-1 |
| chr3_2 | CDS | 65078631 | 65078756 | 65078631 | ID=Msa0417770-mRNA-1:cds;Parent=Msa0417770-mRNA-1 |
| chr3_2 | CDS | 65078198 | 65078307 | 65078198 | ID=Msa0417770-mRNA-1:cds;Parent=Msa0417770-mRNA-1 |
| chr3_2 | CDS | 65077917 | 65078065 | 65077917 | ID=Msa0417770-mRNA-1:cds;Parent=Msa0417770-mRNA-1 |
| chr3_2 | three_prime_UTR | 65077397 | 65077916 | 65077397 | ID=Msa0417770-mRNA-1:three_prime_utr;Parent=Msa0417770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
