AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1276970

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1276970 MtrunA17_Chr8g0344961 95.288 382 18 0 1 382 1 382 0.0 692
Msa1276970 MtrunA17_Chr2g0334031 78.182 385 63 6 1 382 1 367 0.0 568
Msa1276970 MtrunA17_Chr1g0195151 46.465 198 56 5 1 195 1 151 1.15e-43 153
Msa1276970 MtrunA17_Chr2g0295421 77.465 71 16 0 117 187 89 159 5.48e-32 121
Msa1276970 MtrunA17_Chr7g0221471 68.657 67 21 0 115 181 42 108 5.29e-28 108
Msa1276970 MtrunA17_Chr7g0221501 68.657 67 21 0 115 181 42 108 7.21e-28 107
Msa1276970 MtrunA17_Chr4g0044881 74.603 63 16 0 118 180 108 170 9.45e-28 109
Msa1276970 MtrunA17_Chr4g0044871 78.947 57 12 0 124 180 96 152 1.21e-26 106
Msa1276970 MtrunA17_Chr4g0044901 78.947 57 12 0 124 180 96 152 4.37e-26 104
Msa1276970 MtrunA17_Chr8g0383591 52.427 103 45 1 107 209 132 230 9.90e-26 105
Msa1276970 MtrunA17_Chr4g0044911 77.193 57 13 0 124 180 96 152 1.36e-25 103
Msa1276970 MtrunA17_Chr2g0283171 60.256 78 30 1 116 192 55 132 1.09e-24 99.0
Msa1276970 MtrunA17_Chr3g0099871 66.154 65 22 0 120 184 23 87 3.71e-24 99.4
Msa1276970 MtrunA17_Chr2g0282621 66.197 71 23 1 116 186 7 76 5.76e-24 97.4
Msa1276970 MtrunA17_Chr2g0316931 69.355 62 19 0 119 180 26 87 8.62e-24 97.8
Msa1276970 MtrunA17_Chr2g0282651 68.852 61 19 0 120 180 66 126 1.34e-23 98.6
Msa1276970 MtrunA17_Chr5g0396911 45.536 112 59 1 123 232 111 222 1.66e-23 99.4
Msa1276970 MtrunA17_Chr8g0375031 48.148 108 53 3 113 218 115 221 1.72e-23 97.4
Msa1276970 MtrunA17_Chr1g0196871 57.500 80 33 1 111 189 3 82 9.70e-23 91.7
Msa1276970 MtrunA17_Chr4g0046161 63.235 68 24 1 116 182 49 116 1.21e-22 92.0
Msa1276970 MtrunA17_Chr4g0055781 68.750 64 19 1 121 183 99 162 1.69e-22 95.5
Msa1276970 MtrunA17_Chr2g0283181 60.494 81 27 2 108 183 129 209 1.96e-22 96.3
Msa1276970 MtrunA17_Chr4g0055801 67.692 65 20 1 120 183 150 214 2.06e-22 96.3
Msa1276970 MtrunA17_Chr4g0026881 42.568 148 77 3 47 193 27 167 2.26e-22 94.7
Msa1276970 MtrunA17_Chr2g0297331 68.852 61 18 1 123 182 13 73 8.66e-22 90.1
Msa1276970 MtrunA17_Chr1g0158971 40.769 130 66 3 92 218 91 212 9.01e-22 95.1
Msa1276970 MtrunA17_Chr7g0261101 68.750 64 19 1 120 182 16 79 1.10e-21 90.1
Msa1276970 MtrunA17_Chr1g0184081 66.154 65 21 1 123 186 20 84 1.19e-21 90.1
Msa1276970 MtrunA17_Chr8g0335321 66.667 60 19 1 123 181 95 154 1.57e-21 91.7
Msa1276970 MtrunA17_Chr8g0335331 71.186 59 16 1 124 181 125 183 1.83e-21 91.3
Msa1276970 MtrunA17_Chr1g0186731 61.429 70 26 1 114 182 11 80 1.96e-21 89.7
Msa1276970 MtrunA17_Chr4g0002631 48.889 90 43 2 121 207 5 94 2.54e-21 90.9
Msa1276970 MtrunA17_Chr4g0055761 56.790 81 32 2 103 180 122 202 2.65e-21 92.4
Msa1276970 MtrunA17_Chr3g0131601 42.742 124 63 1 64 187 24 139 3.69e-21 92.0
Msa1276970 MtrunA17_Chr5g0438801 43.925 107 60 0 74 180 1 107 5.30e-21 92.0
Msa1276970 MtrunA17_Chr5g0438831 68.966 58 18 0 123 180 45 102 6.03e-21 91.7
Msa1276970 MtrunA17_Chr1g0170531 54.217 83 37 1 99 180 64 146 6.33e-21 90.5
Msa1276970 MtrunA17_Chr7g0250731 66.667 60 19 1 123 181 60 119 7.10e-21 89.7
Msa1276970 MtrunA17_Chr7g0261151 70.492 61 17 1 123 182 19 79 9.15e-21 87.4
Msa1276970 MtrunA17_Chr7g0250721 66.667 60 19 1 123 181 60 119 9.90e-21 89.4
Msa1276970 MtrunA17_Chr8g0382491 38.255 149 73 4 102 247 96 228 1.18e-20 90.9
Msa1276970 MtrunA17_Chr8g0335311 55.844 77 26 2 122 190 94 170 1.37e-20 89.0
Msa1276970 MtrunA17_Chr7g0250711 66.667 60 19 1 123 181 59 118 1.44e-20 89.0
Msa1276970 MtrunA17_Chr1g0186671 68.852 61 18 1 123 182 18 78 1.76e-20 86.7
Msa1276970 MtrunA17_Chr5g0425561 53.165 79 32 1 102 180 156 229 2.16e-20 91.7
Msa1276970 MtrunA17_Chr5g0437671 62.295 61 23 0 121 181 82 142 2.74e-20 91.7
Msa1276970 MtrunA17_Chr8g0387801 68.421 57 18 0 123 179 106 162 5.12e-20 89.7
Msa1276970 MtrunA17_Chr4g0055951 57.353 68 29 0 118 185 68 135 5.50e-20 88.6
Msa1276970 MtrunA17_Chr7g0257911 62.712 59 22 0 123 181 30 88 5.91e-20 89.0
Msa1276970 MtrunA17_Chr3g0126321 59.155 71 24 1 123 188 112 182 6.77e-20 90.1
Msa1276970 MtrunA17_Chr3g0115631 51.163 86 25 1 95 180 138 206 6.83e-20 89.7
Msa1276970 MtrunA17_Chr8g0390091 56.000 75 30 1 112 183 22 96 7.33e-20 87.8
Msa1276970 MtrunA17_Chr2g0324131 65.517 58 20 0 124 181 218 275 7.37e-20 90.5
Msa1276970 MtrunA17_Chr5g0412641 66.667 57 19 0 123 179 45 101 7.92e-20 89.7
Msa1276970 MtrunA17_Chr1g0189941 46.591 88 34 2 111 188 1 85 9.86e-20 85.5
Msa1276970 MtrunA17_Chr3g0129421 69.863 73 18 1 109 181 159 227 1.76e-19 89.0
Msa1276970 MtrunA17_Chr7g0232261 51.948 77 30 1 114 183 44 120 2.22e-19 86.3
Msa1276970 MtrunA17_Chr8g0378811 42.056 107 61 1 107 213 39 144 2.26e-19 87.0
Msa1276970 MtrunA17_Chr3g0134161 52.000 75 36 0 107 181 28 102 2.43e-19 84.7
Msa1276970 MtrunA17_Chr6g0486701 60.345 58 23 0 124 181 44 101 2.66e-19 85.9
Msa1276970 MtrunA17_Chr3g0137174 58.333 60 25 0 121 180 5 64 2.79e-19 85.1
Msa1276970 MtrunA17_Chr4g0026931 61.765 68 25 1 117 183 124 191 3.46e-19 86.7
Msa1276970 MtrunA17_Chr8g0367911 63.158 57 21 0 123 179 43 99 3.82e-19 86.7
Msa1276970 MtrunA17_Chr2g0331231 47.126 87 36 2 107 183 14 100 4.04e-19 85.1
Msa1276970 MtrunA17_Chr3g0083501 68.627 51 16 0 131 181 2 52 4.11e-19 80.9
Msa1276970 MtrunA17_Chr5g0399441 58.333 60 25 0 124 183 28 87 4.20e-19 84.3
Msa1276970 MtrunA17_Chr1g0183981 43.966 116 45 4 80 194 43 139 4.36e-19 85.1
Msa1276970 MtrunA17_Chr5g0432821 59.677 62 25 0 119 180 119 180 5.44e-19 86.3
Msa1276970 MtrunA17_Chr2g0323171 58.333 60 25 0 121 180 62 121 6.18e-19 84.0
Msa1276970 MtrunA17_Chr1g0184031 48.864 88 37 2 108 194 68 148 7.28e-19 84.7
Msa1276970 MtrunA17_Chr1g0196781 60.656 61 24 0 120 180 148 208 7.67e-19 86.3
Msa1276970 MtrunA17_Chr1g0184011 50.000 98 34 3 98 194 65 148 8.03e-19 84.7
Msa1276970 MtrunA17_Chr1g0170471 43.220 118 66 1 73 189 32 149 8.47e-19 83.2
Msa1276970 MtrunA17_Chr7g0275841 42.857 84 46 1 102 183 4 87 9.67e-19 82.8
Msa1276970 MtrunA17_Chr4g0062551 50.000 74 37 0 107 180 36 109 1.02e-18 82.0
Msa1276970 MtrunA17_Chr3g0140161 60.000 60 24 0 124 183 43 102 1.04e-18 83.2
Msa1276970 MtrunA17_Chr4g0062161 50.000 74 37 0 107 180 36 109 1.08e-18 83.6
Msa1276970 MtrunA17_Chr8g0340311 60.345 58 23 0 124 181 47 104 1.22e-18 83.6
Msa1276970 MtrunA17_Chr4g0017851 37.815 119 63 2 77 190 77 189 1.26e-18 85.5
Msa1276970 MtrunA17_Chr4g0063751 62.069 58 22 0 123 180 6 63 2.29e-18 83.2
Msa1276970 MtrunA17_Chr1g0183961 69.565 69 18 2 123 188 26 94 2.84e-18 80.9
Msa1276970 MtrunA17_Chr4g0003421 62.069 58 22 0 123 180 39 96 3.05e-18 83.6
Msa1276970 MtrunA17_Chr7g0252381 54.667 75 33 1 123 196 41 115 3.66e-18 84.0
Msa1276970 MtrunA17_Chr4g0023411 61.404 57 22 0 124 180 65 121 3.74e-18 82.0
Msa1276970 MtrunA17_Chr6g0461271 45.349 86 43 1 109 190 18 103 4.13e-18 84.3
Msa1276970 MtrunA17_Chr1g0186681 66.129 62 19 2 123 182 18 79 4.25e-18 80.1
Msa1276970 MtrunA17_Chr7g0261181 47.321 112 52 2 113 223 2 107 4.57e-18 79.7
Msa1276970 MtrunA17_Chr7g0217991 48.864 88 44 1 117 204 36 122 4.76e-18 85.5
Msa1276970 MtrunA17_Chr8g0350701 42.574 101 50 2 116 208 19 119 5.44e-18 84.0
Msa1276970 MtrunA17_Chr5g0437371 61.017 59 23 0 121 179 63 121 5.97e-18 84.0
Msa1276970 MtrunA17_Chr8g0334801 48.718 78 31 1 113 181 32 109 1.06e-17 80.9
Msa1276970 MtrunA17_Chr2g0333011 60.345 58 23 0 123 180 6 63 1.10e-17 80.1
Msa1276970 MtrunA17_Chr2g0301191 43.373 83 47 0 116 198 11 93 1.59e-17 80.5
Msa1276970 MtrunA17_Chr7g0253424 50.685 73 32 1 122 190 37 109 2.04e-17 81.6
Msa1276970 MtrunA17_Chr2g0286161 55.882 68 25 1 117 179 38 105 2.65e-17 81.6
Msa1276970 MtrunA17_Chr4g0066931 49.333 75 36 1 107 179 34 108 3.37e-17 82.0
Msa1276970 MtrunA17_Chr8g0346741 51.562 64 31 0 120 183 35 98 3.46e-17 79.0
Msa1276970 MtrunA17_Chr6g0461941 73.770 61 16 0 120 180 16 76 3.65e-17 79.7
Msa1276970 MtrunA17_Chr6g0453661 49.351 77 34 1 118 189 32 108 4.00e-17 82.4
Msa1276970 MtrunA17_Chr4g0042761 53.226 62 29 0 118 179 42 103 4.19e-17 81.3
Msa1276970 MtrunA17_Chr8g0345531 61.111 54 19 1 118 171 110 161 5.04e-17 81.6
Msa1276970 MtrunA17_Chr1g0183931 51.613 93 41 2 98 189 78 167 5.95e-17 79.7
Msa1276970 MtrunA17_Chr7g0265851 50.000 76 33 1 120 190 20 95 6.58e-17 78.6
Msa1276970 MtrunA17_Chr1g0184061 47.917 96 41 2 98 192 59 146 7.12e-17 79.0
Msa1276970 MtrunA17_Chr1g0184071 51.852 81 31 2 115 194 60 133 7.48e-17 77.8
Msa1276970 MtrunA17_Chr1g0153151 58.621 58 24 0 124 181 44 101 7.88e-17 77.8
Msa1276970 MtrunA17_Chr7g0261201 59.211 76 30 1 117 191 91 166 8.18e-17 79.3
Msa1276970 MtrunA17_Chr2g0301171 41.463 82 48 0 117 198 12 93 1.22e-16 77.8
Msa1276970 MtrunA17_Chr1g0167781 48.889 90 45 1 94 182 52 141 2.26e-16 77.4
Msa1276970 MtrunA17_Chr1g0205961 46.053 76 37 1 116 187 107 182 2.96e-16 79.3
Msa1276970 MtrunA17_Chr5g0401871 55.932 59 26 0 123 181 24 82 3.13e-16 76.3
Msa1276970 MtrunA17_Chr1g0150671 54.386 57 26 0 124 180 46 102 3.54e-16 78.2
Msa1276970 MtrunA17_Chr3g0142081 48.454 97 47 2 124 220 39 132 3.83e-16 77.0
Msa1276970 MtrunA17_Chr1g0150691 54.386 57 26 0 124 180 22 78 4.12e-16 76.6
Msa1276970 MtrunA17_Chr1g0150631 54.386 57 26 0 124 180 38 94 5.65e-16 76.6
Msa1276970 MtrunA17_Chr7g0261171 51.807 83 39 1 102 183 63 145 6.36e-16 76.6
Msa1276970 MtrunA17_Chr1g0150661 52.632 57 27 0 124 180 35 91 7.12e-16 76.3
Msa1276970 MtrunA17_Chr1g0155751 63.793 58 21 0 124 181 39 96 7.31e-16 77.0
Msa1276970 MtrunA17_Chr1g0200931 54.839 62 27 1 119 179 18 79 9.64e-16 73.6
Msa1276970 MtrunA17_Chr1g0209891 55.172 58 24 1 116 173 46 101 1.32e-15 76.6
Msa1276970 MtrunA17_Chr6g0473881 43.902 82 43 1 114 192 100 181 1.65e-15 76.6
Msa1276970 MtrunA17_Chr6g0473931 46.341 82 41 1 114 192 23 104 1.84e-15 74.3
Msa1276970 MtrunA17_Chr6g0473941 45.122 82 42 1 114 192 23 104 3.00e-15 73.9
Msa1276970 MtrunA17_Chr1g0203861 43.590 78 44 0 106 183 26 103 3.55e-15 73.9
Msa1276970 MtrunA17_Chr1g0201671 56.962 79 28 1 131 209 146 218 4.48e-15 75.9
Msa1276970 MtrunA17_Chr6g0473741 48.571 70 36 0 114 183 56 125 4.57e-15 73.9
Msa1276970 MtrunA17_Chr2g0301181 38.947 95 55 1 104 198 2 93 5.43e-15 73.9
Msa1276970 MtrunA17_Chr6g0473961 43.902 82 43 1 114 192 44 125 5.97e-15 73.2
Msa1276970 MtrunA17_Chr6g0473971 43.038 79 42 1 117 192 47 125 7.77e-15 73.6
Msa1276970 MtrunA17_Chr3g0136551 47.541 61 32 0 119 179 60 120 7.90e-15 73.9
Msa1276970 MtrunA17_Chr6g0473781 44.706 85 42 1 114 198 47 126 8.87e-15 73.2
Msa1276970 MtrunA17_Chr4g0057241 52.055 73 31 2 119 188 10 81 1.32e-14 71.2
Msa1276970 MtrunA17_Chr8g0345551 60.000 50 20 0 117 166 110 159 1.50e-14 74.3
Msa1276970 MtrunA17_Chr6g0486711 65.517 58 20 0 124 181 49 106 1.83e-14 72.4
Msa1276970 MtrunA17_Chr1g0146191 52.000 75 36 0 107 181 30 104 2.28e-14 72.4
Msa1276970 MtrunA17_Chr6g0473981 44.304 79 41 1 117 192 47 125 2.46e-14 72.4
Msa1276970 MtrunA17_Chr1g0149331 60.656 61 24 0 120 180 3 63 2.96e-14 70.9
Msa1276970 MtrunA17_Chr1g0186741 60.000 65 25 1 119 182 68 132 3.06e-14 71.2
Msa1276970 MtrunA17_Chr6g0473771 38.298 94 49 2 99 183 9 102 4.07e-14 68.6
Msa1276970 MtrunA17_Chr6g0473861 35.897 117 59 4 120 220 59 175 4.27e-14 72.0
Msa1276970 MtrunA17_Chr3g0108241 53.846 78 33 2 120 196 111 186 5.54e-14 71.2
Msa1276970 MtrunA17_Chr7g0243431 52.381 63 23 1 124 179 78 140 6.63e-14 73.2
Msa1276970 MtrunA17_Chr5g0396191 56.667 60 26 0 124 183 11 70 9.96e-14 69.3
Msa1276970 MtrunA17_Chr6g0474001 43.038 79 42 1 117 192 47 125 1.25e-13 70.5
Msa1276970 MtrunA17_Chr5g0422501 42.169 83 46 1 97 179 80 160 2.54e-13 70.9
Msa1276970 MtrunA17_Chr6g0464581 76.471 51 12 0 131 181 187 237 3.09e-13 70.5
Msa1276970 MtrunA17_Chr3g0136541 50.000 54 27 0 126 179 42 95 5.15e-13 68.2
Msa1276970 MtrunA17_Chr5g0438841 53.448 58 27 0 123 180 15 72 9.47e-13 65.9
Msa1276970 MtrunA17_Chr1g0186711 56.061 66 28 1 123 187 16 81 1.42e-12 64.3
Msa1276970 MtrunA17_Chr1g0186721 56.061 66 28 1 123 187 16 81 2.07e-12 63.5
Msa1276970 MtrunA17_Chr5g0423811 41.975 81 39 1 107 179 71 151 2.38e-12 67.0
Msa1276970 MtrunA17_Chr5g0396171 44.643 56 31 0 126 181 26 81 2.75e-12 62.8
Msa1276970 MtrunA17_Chr3g0137831 56.452 62 27 0 119 180 3 64 5.09e-12 64.7
Msa1276970 MtrunA17_Chr5g0396741 60.656 61 24 0 120 180 113 173 5.82e-12 66.2
Msa1276970 MtrunA17_Chr7g0225131 50.877 57 25 1 124 180 29 82 1.35e-11 60.5
Msa1276970 MtrunA17_Chr4g0002771 45.872 109 52 2 82 188 40 143 1.57e-11 63.2
Msa1276970 MtrunA17_Chr5g0424051 43.373 83 46 1 102 183 74 156 2.18e-11 64.3
Msa1276970 MtrunA17_Chr5g0398091 43.836 73 35 1 117 183 47 119 2.35e-11 63.2
Msa1276970 MtrunA17_Chr5g0398061 43.836 73 35 1 117 183 42 114 3.73e-11 62.4
Msa1276970 MtrunA17_Chr1g0198661 46.269 67 34 1 112 178 52 116 4.07e-11 63.9
Msa1276970 MtrunA17_Chr5g0398081 43.836 73 35 1 117 183 42 114 4.29e-11 62.4
Msa1276970 MtrunA17_Chr4g0057231 39.048 105 57 3 86 183 2 106 6.80e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1276970 AT3G14230.3 43.781 402 162 14 1 374 1 366 9.39e-65 211
Msa1276970 AT3G14230.2 43.284 402 165 13 1 374 1 367 1.29e-63 208
Msa1276970 AT3G14230.1 43.243 407 162 15 1 374 1 371 5.29e-63 206
Msa1276970 AT1G53910.1 43.358 399 168 17 1 382 1 358 1.94e-56 189
Msa1276970 AT1G53910.2 43.358 399 168 17 1 382 1 358 1.94e-56 189
Msa1276970 AT1G53910.3 44.000 400 162 19 1 382 1 356 3.49e-56 188
Msa1276970 AT3G16770.1 44.751 181 55 5 1 181 1 136 3.72e-37 135
Msa1276970 AT1G72360.3 40.887 203 67 5 1 203 1 150 1.70e-36 134
Msa1276970 AT1G72360.2 41.379 203 68 6 1 203 1 152 1.77e-36 134
Msa1276970 AT2G47520.1 44.199 181 64 6 77 245 7 162 6.86e-35 127
Msa1276970 AT1G72360.1 67.416 89 26 1 115 203 16 101 5.39e-34 125
Msa1276970 AT2G33710.1 62.069 87 30 2 111 197 59 142 1.15e-26 106
Msa1276970 AT2G33710.2 62.069 87 30 2 111 197 59 142 1.42e-26 106
Msa1276970 AT5G61890.1 50.476 105 49 2 112 216 78 179 2.02e-26 106
Msa1276970 AT5G13330.1 61.842 76 29 0 106 181 21 96 2.16e-26 105
Msa1276970 AT3G20310.1 45.600 125 58 2 96 220 5 119 6.37e-24 99.8
Msa1276970 AT5G07310.1 41.104 163 71 4 51 195 8 163 6.84e-24 100
Msa1276970 AT3G15210.1 74.138 58 15 0 123 180 24 81 1.02e-23 98.6
Msa1276970 AT5G51190.1 68.750 64 19 1 121 183 69 132 2.05e-23 97.4
Msa1276970 AT5G44210.1 67.742 62 20 0 119 180 28 89 2.93e-23 96.7
Msa1276970 AT4G17490.1 71.875 64 17 1 121 183 134 197 4.24e-23 98.2
Msa1276970 AT1G03800.1 64.789 71 24 1 111 180 39 109 4.95e-23 97.1
Msa1276970 AT1G28360.1 68.852 61 19 0 120 180 8 68 7.61e-23 95.1
Msa1276970 AT5G47230.1 60.000 80 31 1 105 183 137 216 9.47e-23 97.4
Msa1276970 AT5G43410.1 64.706 68 23 1 122 188 13 80 6.10e-22 90.9
Msa1276970 AT5G50080.2 58.065 93 38 1 93 185 56 147 6.78e-22 93.6
Msa1276970 AT2G44840.1 47.222 108 49 3 108 208 76 182 6.83e-22 93.6
Msa1276970 AT1G28370.2 70.690 58 17 0 123 180 57 114 6.84e-22 92.8
Msa1276970 AT1G50640.1 70.690 58 17 0 123 180 27 84 7.17e-22 93.6
Msa1276970 AT5G50080.1 58.065 93 38 1 93 185 47 138 7.27e-22 93.2
Msa1276970 AT4G11140.1 68.966 58 18 0 123 180 86 143 8.71e-22 94.7
Msa1276970 AT5G07580.1 51.064 94 40 2 107 194 93 186 9.40e-22 92.8
Msa1276970 AT1G28370.1 70.690 58 17 0 123 180 19 76 1.18e-21 91.3
Msa1276970 AT4G23750.2 48.980 98 41 2 83 179 88 177 1.82e-21 94.7
Msa1276970 AT4G23750.1 48.980 98 41 2 83 179 88 177 1.82e-21 94.7
Msa1276970 AT1G22190.1 52.941 85 23 1 97 181 73 140 2.49e-21 92.8
Msa1276970 AT5G61600.1 62.121 66 24 1 123 187 87 152 2.70e-21 92.4
Msa1276970 AT2G22200.1 56.410 78 31 1 106 180 50 127 2.75e-21 92.8
Msa1276970 AT5G47220.1 67.742 62 19 1 120 180 113 174 3.63e-21 92.0
Msa1276970 AT2G20880.1 68.966 58 18 0 124 181 187 244 3.80e-21 93.6
Msa1276970 AT5G65130.2 48.913 92 42 1 100 191 94 180 4.29e-21 92.4
Msa1276970 AT5G65130.1 48.913 92 42 1 100 191 92 178 5.05e-21 92.4
Msa1276970 AT1G43160.1 62.195 82 31 0 109 190 46 127 5.19e-21 90.1
Msa1276970 AT4G28140.1 66.102 59 20 0 124 182 143 201 6.01e-21 92.4
Msa1276970 AT4G39780.1 48.889 90 37 2 92 181 70 150 7.52e-21 91.7
Msa1276970 AT4G18450.1 59.036 83 30 3 105 185 93 173 7.92e-21 92.4
Msa1276970 AT4G27950.1 61.765 68 23 1 121 185 115 182 8.39e-21 92.8
Msa1276970 AT2G46310.1 53.247 77 36 0 123 199 98 174 1.21e-20 91.7
Msa1276970 AT3G23240.1 56.098 82 35 1 116 196 74 155 1.53e-20 89.7
Msa1276970 AT4G17500.1 71.186 59 16 1 123 180 147 205 1.61e-20 90.5
Msa1276970 AT4G13620.1 44.898 98 51 1 84 181 195 289 1.65e-20 92.4
Msa1276970 AT1G75490.1 52.000 75 34 1 124 198 42 114 2.11e-20 89.0
Msa1276970 AT1G24590.1 55.000 80 34 1 123 200 57 136 3.98e-20 90.1
Msa1276970 AT3G23230.1 64.062 64 22 1 120 182 16 79 4.76e-20 85.9
Msa1276970 AT5G25190.1 45.556 90 46 1 121 207 5 94 5.95e-20 87.0
Msa1276970 AT1G36060.1 61.538 65 25 0 116 180 135 199 6.01e-20 90.1
Msa1276970 AT4G32800.1 47.826 92 40 2 115 198 7 98 6.95e-20 87.8
Msa1276970 AT1G78080.1 62.903 62 23 0 119 180 147 208 9.31e-20 89.7
Msa1276970 AT1G12890.1 55.556 72 32 0 108 179 5 76 9.93e-20 87.4
Msa1276970 AT5G11590.1 52.273 88 33 2 112 190 35 122 1.06e-19 87.8
Msa1276970 AT5G64750.1 44.340 106 47 1 131 224 192 297 1.13e-19 90.1
Msa1276970 AT3G61630.1 44.860 107 54 2 120 223 101 205 1.44e-19 89.0
Msa1276970 AT1G12980.1 52.941 85 33 2 101 179 29 112 1.72e-19 89.0
Msa1276970 AT5G53290.1 66.667 57 19 0 123 179 124 180 1.93e-19 89.0
Msa1276970 AT1G01250.1 52.857 70 33 0 113 182 34 103 2.01e-19 85.9
Msa1276970 AT2G25820.1 56.944 72 26 1 124 190 26 97 2.52e-19 86.3
Msa1276970 AT4G36900.1 56.061 66 29 0 116 181 22 87 2.55e-19 85.5
Msa1276970 AT3G16280.1 61.667 60 23 0 124 183 61 120 2.94e-19 86.3
Msa1276970 AT3G50260.1 52.055 73 35 0 117 189 14 86 3.16e-19 84.3
Msa1276970 AT2G35700.1 60.000 60 24 0 124 183 45 104 4.48e-19 84.7
Msa1276970 AT3G16280.2 61.667 60 23 0 124 183 79 138 4.71e-19 86.3
Msa1276970 AT3G57600.1 47.619 84 39 1 123 201 27 110 5.22e-19 86.7
Msa1276970 AT5G13910.1 57.353 68 25 1 116 179 8 75 5.65e-19 85.1
Msa1276970 AT5G67190.1 56.716 67 29 0 118 184 15 81 8.96e-19 84.0
Msa1276970 AT4G16750.1 47.619 84 41 1 103 183 16 99 9.76e-19 83.6
Msa1276970 AT2G31230.1 58.571 70 28 1 124 192 86 155 1.20e-18 84.7
Msa1276970 AT1G15360.1 62.069 58 22 0 123 180 6 63 1.27e-18 83.6
Msa1276970 AT1G15360.2 62.069 58 22 0 123 180 6 63 1.27e-18 83.6
Msa1276970 AT1G74930.1 43.011 93 49 1 110 198 3 95 1.41e-18 83.6
Msa1276970 AT5G18560.1 37.195 164 69 7 114 253 45 198 1.47e-18 86.3
Msa1276970 AT5G18450.1 60.714 56 22 0 124 179 34 89 1.56e-18 85.9
Msa1276970 AT1G19210.1 50.000 70 35 0 121 190 9 78 1.82e-18 82.8
Msa1276970 AT2G40340.2 56.923 65 28 0 124 188 14 78 1.91e-18 85.1
Msa1276970 AT2G40340.5 56.923 65 28 0 124 188 14 78 1.91e-18 85.1
Msa1276970 AT2G40340.4 56.923 65 28 0 124 188 14 78 1.91e-18 85.1
Msa1276970 AT2G44940.1 53.425 73 28 1 117 183 87 159 2.19e-18 85.1
Msa1276970 AT4G06746.1 57.377 61 26 0 123 183 35 95 2.89e-18 81.3
Msa1276970 AT4G31060.1 50.000 80 37 1 103 182 9 85 2.97e-18 82.4
Msa1276970 AT5G19790.1 46.988 83 44 0 110 192 8 90 3.76e-18 83.6
Msa1276970 AT3G60490.1 50.649 77 33 1 119 190 66 142 3.76e-18 83.6
Msa1276970 AT3G11020.1 60.345 58 23 0 124 181 78 135 7.39e-18 84.3
Msa1276970 AT2G40340.6 56.923 65 28 0 124 188 79 143 9.75e-18 84.0
Msa1276970 AT1G28160.1 63.158 57 21 0 123 179 38 94 9.98e-18 82.4
Msa1276970 AT2G40340.3 60.345 58 23 0 124 181 72 129 1.06e-17 83.2
Msa1276970 AT2G40340.1 60.345 58 23 0 124 181 72 129 1.19e-17 83.6
Msa1276970 AT1G71450.1 56.667 60 26 0 124 183 24 83 1.21e-17 80.5
Msa1276970 AT5G05410.2 61.404 57 22 0 124 180 79 135 1.31e-17 83.2
Msa1276970 AT5G05410.1 61.404 57 22 0 124 180 79 135 1.42e-17 83.6
Msa1276970 AT5G25390.2 60.345 58 23 0 123 180 6 63 1.73e-17 80.5
Msa1276970 AT5G25810.1 58.333 60 25 0 124 183 36 95 1.96e-17 80.9
Msa1276970 AT4G25470.1 43.617 94 47 1 114 201 41 134 3.64e-17 80.1
Msa1276970 AT4G25490.1 51.429 70 34 0 114 183 38 107 5.24e-17 79.7
Msa1276970 AT1G21910.1 33.562 146 82 5 124 262 50 187 6.96e-17 79.7
Msa1276970 AT2G23340.1 58.621 58 24 0 124 181 28 85 7.20e-17 78.2
Msa1276970 AT5G21960.1 44.872 78 43 0 123 200 6 83 9.79e-17 79.0
Msa1276970 AT4G34410.1 58.974 78 32 0 103 180 115 192 1.21e-16 79.7
Msa1276970 AT4G25480.1 50.000 70 35 0 114 183 41 110 1.25e-16 78.6
Msa1276970 AT1G04370.1 63.235 68 24 1 121 187 17 84 1.39e-16 76.3
Msa1276970 AT1G46768.3 54.098 61 28 0 121 181 28 88 2.06e-16 75.9
Msa1276970 AT1G46768.1 54.098 61 28 0 121 181 28 88 2.22e-16 76.3
Msa1276970 AT1G46768.2 54.098 61 28 0 121 181 28 88 2.22e-16 76.3
Msa1276970 AT3G23220.1 68.852 61 18 1 123 182 13 73 3.70e-16 75.1
Msa1276970 AT2G40350.2 54.386 57 26 0 124 180 74 130 3.99e-16 75.9
Msa1276970 AT5G25390.1 58.621 58 21 1 123 180 6 60 4.26e-16 76.3
Msa1276970 AT2G40350.1 54.386 57 26 0 124 180 67 123 4.53e-16 75.5
Msa1276970 AT5G51990.1 43.158 95 51 1 92 183 19 113 1.20e-15 75.9
Msa1276970 AT1G71130.1 56.061 66 24 1 119 179 74 139 1.38e-15 74.3
Msa1276970 AT1G77200.1 56.250 80 29 2 117 190 35 114 2.30e-15 75.5
Msa1276970 AT1G53170.1 56.410 78 34 0 102 179 9 86 2.81e-15 73.9
Msa1276970 AT1G22985.1 62.903 62 20 2 121 179 72 133 3.07e-15 73.2
Msa1276970 AT2G36450.1 54.839 62 27 1 120 180 11 72 3.13e-15 73.9
Msa1276970 AT1G06160.1 57.143 70 29 1 124 192 82 151 8.64e-15 73.9
Msa1276970 AT1G68550.1 59.649 57 23 0 110 166 99 155 9.02e-15 75.1
Msa1276970 AT1G68550.2 59.649 57 23 0 110 166 99 155 9.02e-15 75.1
Msa1276970 AT5G61590.1 51.136 88 36 3 114 194 96 183 1.25e-14 72.4
Msa1276970 AT5G67000.1 51.667 60 29 0 119 178 116 175 1.67e-13 68.9
Msa1276970 AT1G25560.1 39.362 94 55 1 90 183 38 129 4.18e-13 70.5
Msa1276970 AT1G64380.1 61.290 62 24 0 119 180 131 192 5.04e-13 70.1
Msa1276970 AT2G40220.1 54.795 73 24 1 116 179 38 110 6.15e-13 69.7
Msa1276970 AT1G63030.2 45.333 75 38 1 117 188 23 97 7.13e-13 67.0
Msa1276970 AT1G63030.1 45.333 75 38 1 117 188 23 97 7.13e-13 67.0
Msa1276970 AT1G12610.1 45.333 75 38 1 117 188 23 97 1.04e-12 67.0
Msa1276970 AT1G68840.2 43.023 86 47 1 94 179 35 118 1.12e-12 68.9
Msa1276970 AT1G68840.1 43.023 86 47 1 94 179 35 118 1.12e-12 68.9
Msa1276970 AT5G11190.1 60.345 58 23 0 123 180 6 63 2.05e-12 65.9
Msa1276970 AT1G33760.1 60.345 58 23 0 124 181 20 77 2.69e-12 65.5
Msa1276970 AT1G12630.1 48.000 75 38 1 106 180 1 74 6.27e-12 64.7
Msa1276970 AT3G25890.1 46.835 79 31 2 85 163 103 170 9.70e-12 65.9
Msa1276970 AT3G25890.2 46.835 79 31 2 85 163 103 170 9.70e-12 65.9
Msa1276970 AT1G71520.1 50.000 52 26 0 114 165 4 55 1.08e-11 62.8
Msa1276970 AT1G49120.1 34.507 142 69 4 118 244 81 213 1.21e-11 65.9
Msa1276970 AT1G13260.1 43.421 76 41 1 104 179 42 115 2.06e-11 65.1
Msa1276970 AT1G22810.1 50.000 52 26 0 114 165 4 55 2.52e-11 61.6
Msa1276970 AT3G25730.1 45.588 68 35 1 112 179 50 115 2.87e-11 64.7
Msa1276970 AT1G77640.1 50.000 70 34 1 111 180 31 99 5.71e-11 62.8

Find 121 sgRNAs with CRISPR-Local

Find 219 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAAGATTTGCTGTTCTTAT+TGG 0.151197 8_3:+11977515 None:intergenic
GTTTATAAGGTTTATGTTTA+TGG 0.152626 8_3:-11974953 Msa1276970:three_prime_UTR
AGAACCTATAAATAATTTAT+TGG 0.187850 8_3:+11975032 None:intergenic
GGCTGGGTTCAGAGAGTTTA+AGG 0.201061 8_3:-11977619 Msa1276970:CDS
TAAATTATTTATAGGTTCTT+AGG 0.208720 8_3:-11975028 Msa1276970:three_prime_UTR
GTCAACGTCCATGGGGAAAA+TGG 0.214828 8_3:-11976017 Msa1276970:CDS
GTTCAATTTCGGCGAAAATA+TGG 0.221203 8_3:-11975758 Msa1276970:CDS
TGTAAGTTGCACTCCGTTTC+CGG 0.237952 8_3:+11975657 None:intergenic
GTGGCCAATAAATTATTTAT+AGG 0.248010 8_3:-11975036 Msa1276970:three_prime_UTR
GAAGCAACTGGAGCCTCTTC+AGG 0.260903 8_3:+11975862 None:intergenic
TGTTAAGTTTGATGTTTATA+AGG 0.292901 8_3:-11974966 Msa1276970:three_prime_UTR
AAAGAGGAAGAATCAGTATA+GGG 0.297510 8_3:-11976046 Msa1276970:CDS
CATTCCAGCTGCGGCGGCGG+TGG 0.318942 8_3:-11977736 Msa1276970:CDS
CTTGACGATGATTTCGAGGC+TGG 0.327055 8_3:-11977636 Msa1276970:CDS
TTGATTATTCTGATCTATGC+TGG 0.333369 8_3:-11975585 Msa1276970:CDS
CTTGGTTTCCTCCTCAAATT+CGG 0.333747 8_3:+11977678 None:intergenic
TTTCGCCGAAATTGAACATT+TGG 0.336677 8_3:+11975764 None:intergenic
TTGAAATGGGGTGGGTGATT+AGG 0.347684 8_3:+11977974 None:intergenic
GAAAGAGGAAGAATCAGTAT+AGG 0.375205 8_3:-11976047 Msa1276970:CDS
GGAAACCAAATGTTCAATTT+CGG 0.381029 8_3:-11975769 Msa1276970:CDS
TGTAGCTTTATTTACATAAC+CGG 0.382932 8_3:+11975236 None:intergenic
TCATTCAACAGCTGCGTCTC+AGG 0.382989 8_3:+11975817 None:intergenic
GCTTCATTGGCTGCTTTGCT+TGG 0.389028 8_3:-11975358 Msa1276970:CDS
ATCTATACTCATATGATTCA+AGG 0.395518 8_3:+11974790 None:intergenic
CAGACACGGACTCCTTTCCT+TGG 0.399573 8_3:+11975976 None:intergenic
GGATGATATAATTGTAAACT+TGG 0.400289 8_3:-11974932 Msa1276970:three_prime_UTR
AGTTCTTCGAGAACGATAAC+TGG 0.404947 8_3:-11975387 Msa1276970:CDS
TTGTTTGAATTCAAAGCAAC+AGG 0.406846 8_3:+11976093 None:intergenic
GGTGTCAAAGGTTTCACCTT+TGG 0.410353 8_3:-11977540 Msa1276970:CDS
CCACCCACCGCCGCCGCAGC+TGG 0.411845 8_3:+11977732 None:intergenic
CAAGGAAAGGAGTCCGTGTC+TGG 0.420025 8_3:-11975975 Msa1276970:CDS
TTTGCTTGACGATGATTTCG+AGG 0.426414 8_3:-11977640 Msa1276970:CDS
ATATCCTCTGGCCGAATTTG+AGG 0.426856 8_3:-11977689 Msa1276970:CDS
TCATTGGCTGCTTTGCTTGG+TGG 0.427521 8_3:-11975355 Msa1276970:CDS
TTCAAACAAGCTAGCTGAAA+AGG 0.429742 8_3:-11976079 Msa1276970:CDS
TGATTATTCTGATCTATGCT+GGG 0.431246 8_3:-11975584 Msa1276970:CDS
TTGAACATTTGGTTTCCGTT+TGG 0.434812 8_3:+11975775 None:intergenic
TCTTCCAAGTCCTTTGTTCG+TGG 0.448071 8_3:-11977498 Msa1276970:intron
CAAACTTAACAATCCTGAAA+AGG 0.448960 8_3:+11974978 None:intergenic
CGTTCTCGAAGAACTTCAGC+TGG 0.457607 8_3:+11975395 None:intergenic
ATCGGAGCCTTCTCCGGAAA+CGG 0.464685 8_3:-11975670 Msa1276970:CDS
TCAACGTCCATGGGGAAAAT+GGG 0.468227 8_3:-11976016 Msa1276970:CDS
TAACTGGAGTGATGCTTCAT+TGG 0.468743 8_3:-11975371 Msa1276970:CDS
TGAGGAGGAAACCAAGTTCA+AGG 0.469181 8_3:-11977671 Msa1276970:CDS
CTTCATTCCAGCTGCGGCGG+CGG 0.472015 8_3:-11977739 Msa1276970:CDS
GCTGACATCGGAGCCTTCTC+CGG 0.475109 8_3:-11975676 Msa1276970:CDS
TTCTGTTCCACTTGATCCAT+AGG 0.479980 8_3:+11975721 None:intergenic
TTGCACTCCGTTTCCGGAGA+AGG 0.480305 8_3:+11975663 None:intergenic
ATTCCAGCTGCGGCGGCGGT+GGG 0.480757 8_3:-11977735 Msa1276970:CDS
AGGCTCCGATGTCAGCATAC+TGG 0.483220 8_3:+11975683 None:intergenic
GGGGTATCCGTCAACGTCCA+TGG 0.487909 8_3:-11976026 Msa1276970:CDS
GGGTTGTTGGTCGGTGTCAA+AGG 0.488518 8_3:-11977552 Msa1276970:CDS
GGGTGGTTCCCGCCGTGTCA+CGG 0.489552 8_3:-11977715 Msa1276970:CDS
AAGCAACTGGAGCCTCTTCA+GGG 0.489740 8_3:+11975863 None:intergenic
AGACACGGACTCCTTTCCTT+GGG 0.494250 8_3:+11975977 None:intergenic
CATCGCCTGCGATGGAAGGC+AGG 0.497804 8_3:+11975281 None:intergenic
GATGACCTGCCTTCCATCGC+AGG 0.498150 8_3:-11975286 Msa1276970:CDS
CTCTTCAGGGAAATTCACCT+TGG 0.502615 8_3:+11975876 None:intergenic
GTGGAAACACAATGAACCTC+TGG 0.506231 8_3:-11975315 Msa1276970:CDS
GGGTATCCGTCAACGTCCAT+GGG 0.507005 8_3:-11976025 Msa1276970:CDS
CTGAGCTCTTTAAAGCCAAA+CGG 0.512317 8_3:-11975790 Msa1276970:CDS
GTGTCACGGCGGATATCCTC+TGG 0.516593 8_3:-11977701 Msa1276970:CDS
GCTGTTCTTATTGGAACCAA+AGG 0.518299 8_3:+11977524 None:intergenic
CCAGCTGCGGCGGCGGTGGG+TGG 0.522898 8_3:-11977732 Msa1276970:CDS
GCATACTGGTTGTTAACCAA+TGG 0.527752 8_3:+11975697 None:intergenic
TCTGCTGCTGCTCCTATGGA+AGG 0.528890 8_3:-11975520 Msa1276970:CDS
GAGGATGAAGATGATGATGA+AGG 0.531248 8_3:-11977573 Msa1276970:CDS
CTCCACGCTTTACTTAAAGC+TGG 0.531385 8_3:+11975071 None:intergenic
AAAAGGATTCGAAGAGAAAG+AGG 0.532558 8_3:-11976062 Msa1276970:CDS
AGATGATGATGAAGGGTTGT+TGG 0.541828 8_3:-11977565 Msa1276970:CDS
GATATCCGCCGTGACACGGC+GGG 0.542390 8_3:+11977707 None:intergenic
GATCTATGCTGGGGCGAACA+AGG 0.548369 8_3:-11975574 Msa1276970:CDS
AATCATACCCACCAAACAAA+GGG 0.549460 8_3:+11974865 None:intergenic
AAAGGAGTCCGTGTCTGGCT+CGG 0.551084 8_3:-11975970 Msa1276970:CDS
GGACTCCTTTCCTTGGGTCA+CGG 0.553627 8_3:+11975983 None:intergenic
TTAGAAAACATCGCCTGCGA+TGG 0.555178 8_3:+11975273 None:intergenic
GAGCTTATGATGCTGAAGCT+AGG 0.555996 8_3:-11975918 Msa1276970:CDS
AAAACATCGCCTGCGATGGA+AGG 0.558682 8_3:+11975277 None:intergenic
CAAGGTGAATTTCCCTGAAG+AGG 0.561624 8_3:-11975875 Msa1276970:CDS
AAGAGGAAGAATCAGTATAG+GGG 0.562075 8_3:-11976045 Msa1276970:CDS
TTGACGATGATTTCGAGGCT+GGG 0.562795 8_3:-11977635 Msa1276970:CDS
TCTAAACAACGTCACCTGGC+CGG 0.563199 8_3:-11975255 Msa1276970:exon
TCACCTTGGCTTTCTTGCCA+CGG 0.566255 8_3:+11975890 None:intergenic
GTCTGAGATTCGCCTTCCAT+AGG 0.567256 8_3:+11975508 None:intergenic
TCCTCCTCAAATTCGGCCAG+AGG 0.570122 8_3:+11977685 None:intergenic
CTTTATTTACATAACCGGCC+AGG 0.572709 8_3:+11975241 None:intergenic
GAAAACACAGACGAAATCTC+AGG 0.572948 8_3:+11975541 None:intergenic
CAGAAGATTGAATTGAACAA+TGG 0.580470 8_3:+11977853 None:intergenic
CGCCGCAGCTGGAATGAAGT+CGG 0.582176 8_3:+11977743 None:intergenic
TCAAGTGGAACAGAAACCAT+TGG 0.589632 8_3:-11975713 Msa1276970:CDS
GCTTGGTGGAGACACAACTC+AGG 0.591323 8_3:-11975341 Msa1276970:CDS
AAATCATACCCACCAAACAA+AGG 0.597679 8_3:+11974864 None:intergenic
TGTGAAATTTGTATTTGACT+TGG 0.599669 8_3:+11978040 None:intergenic
ATCTGCGAGCTCCTCAGAGA+GGG 0.606114 8_3:+11975426 None:intergenic
GTTACCACGAACAAAGGACT+TGG 0.606445 8_3:+11977494 None:intergenic
TACCAGCTTTAAGTAAAGCG+TGG 0.606847 8_3:-11975073 Msa1276970:three_prime_UTR
AAAACAGTTACCACGAACAA+AGG 0.607112 8_3:+11977488 None:intergenic
GATGATGAAGGGTTGTTGGT+CGG 0.608775 8_3:-11977561 Msa1276970:CDS
CGACTTCATTCCAGCTGCGG+CGG 0.609807 8_3:-11977742 Msa1276970:CDS
AGAGGATATCCGCCGTGACA+CGG 0.610090 8_3:+11977703 None:intergenic
CAGCTGAGATCCGTGACCCA+AGG 0.616099 8_3:-11975993 Msa1276970:CDS
GAGATCCGTGACCCAAGGAA+AGG 0.617143 8_3:-11975988 Msa1276970:CDS
TTCTGATTTCGATGAAGACG+AGG 0.618845 8_3:-11977592 Msa1276970:CDS
CTCCGACTTCATTCCAGCTG+CGG 0.624661 8_3:-11977745 Msa1276970:CDS
TGAAAGTTCCGAGCCAGACA+CGG 0.629911 8_3:+11975962 None:intergenic
TATGCTGTCTGACAACACTC+AGG 0.633633 8_3:-11975482 Msa1276970:CDS
GATTATTCTGATCTATGCTG+GGG 0.633722 8_3:-11975583 Msa1276970:CDS
TCCTCTGGCCGAATTTGAGG+AGG 0.636159 8_3:-11977686 Msa1276970:CDS
GTTCTCGAAGAACTTCAGCT+GGG 0.644927 8_3:+11975396 None:intergenic
GGTGGAGACACAACTCAGGA+TGG 0.645410 8_3:-11975337 Msa1276970:CDS
GGAGACACAACTCAGGATGG+TGG 0.648547 8_3:-11975334 Msa1276970:CDS
AGGATGAAGATGATGATGAA+GGG 0.650127 8_3:-11977572 Msa1276970:CDS
AACAACCAGTATGCTGACAT+CGG 0.657054 8_3:-11975688 Msa1276970:CDS
GCAGGTCATCGAAGTTCCAG+AGG 0.663102 8_3:+11975299 None:intergenic
GCTGAAGCTAGGAGAATCCG+TGG 0.669094 8_3:-11975907 Msa1276970:CDS
AATCCGTGGCAAGAAAGCCA+AGG 0.680019 8_3:-11975893 Msa1276970:CDS
TTCTGCAAAGACCCTCTCTG+AGG 0.687108 8_3:-11975437 Msa1276970:CDS
TATCTGCGAGCTCCTCAGAG+AGG 0.699188 8_3:+11975425 None:intergenic
GGTATCCGTCAACGTCCATG+GGG 0.721547 8_3:-11976024 Msa1276970:CDS
GGATATCCGCCGTGACACGG+CGG 0.741704 8_3:+11977706 None:intergenic
TGGTTCCCGCCGTGTCACGG+CGG 0.745152 8_3:-11977712 Msa1276970:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATGTGATTTAATTTTAT+AGG - chr8_3:11975530-11975549 Msa1276970:CDS 10.0%
!!! TTATGTGATTTAATTTTATA+GGG - chr8_3:11975531-11975550 Msa1276970:CDS 10.0%
!! ATTACATTAAAAAAATACAA+AGG + chr8_3:11975672-11975691 None:intergenic 10.0%
!!! TTTTTTTAATGTAATTTTTG+TGG - chr8_3:11975677-11975696 Msa1276970:CDS 10.0%
!! TAAATTATCATAAATAAAGT+TGG - chr8_3:11975844-11975863 Msa1276970:CDS 10.0%
!! TAATCCATATAAAATTAAAA+CGG - chr8_3:11976578-11976597 Msa1276970:intron 10.0%
!! CTAAAAACATAATAAAATGT+GGG + chr8_3:11975403-11975422 None:intergenic 15.0%
!! ACTAAAAACATAATAAAATG+TGG + chr8_3:11975404-11975423 None:intergenic 15.0%
!!! TTTATTATGTTTTTAGTTGA+TGG - chr8_3:11975407-11975426 Msa1276970:CDS 15.0%
!!! ATTTAATTTTGCCAAATTTA+AGG - chr8_3:11975455-11975474 Msa1276970:CDS 15.0%
!!! TTTTAATTACCAATCTAAAT+TGG + chr8_3:11975738-11975757 None:intergenic 15.0%
!! TAAATTATCATAAATGAAGT+TGG - chr8_3:11975891-11975910 Msa1276970:CDS 15.0%
!!! TCTTAACTTTTAAAAATTTG+AGG - chr8_3:11976347-11976366 Msa1276970:intron 15.0%
!!! AGTAACTTTTATTTTACATT+CGG - chr8_3:11977566-11977585 Msa1276970:CDS 15.0%
!! AGAACCTATAAATAATTTAT+TGG + chr8_3:11977746-11977765 None:intergenic 15.0%
!! TAAATTATTTATAGGTTCTT+AGG - chr8_3:11977747-11977766 Msa1276970:CDS 15.0%
!!! TTTTCTTTTTGCATTGAAAT+GGG + chr8_3:11974817-11974836 None:intergenic 20.0%
!!! TTCTGCAATTTTTTTTCAAT+TGG - chr8_3:11974940-11974959 Msa1276970:three_prime_UTR 20.0%
!!! TCTGCAATTTTTTTTCAATT+GGG - chr8_3:11974941-11974960 Msa1276970:three_prime_UTR 20.0%
!!! TTTTTATCTCTCTTGAAAAA+AGG + chr8_3:11974988-11975007 None:intergenic 20.0%
!!! TGTATGAATTTGTTTTGTTT+TGG - chr8_3:11975343-11975362 Msa1276970:CDS 20.0%
!!! TAGTATGATTTATGATTTTG+TGG - chr8_3:11975494-11975513 Msa1276970:CDS 20.0%
!!! AGTATGATTTATGATTTTGT+GGG - chr8_3:11975495-11975514 Msa1276970:CDS 20.0%
!!! TGAACATGAAATTTTATTGA+TGG - chr8_3:11975561-11975580 Msa1276970:CDS 20.0%
!!! TTAATGTAATTTTTGTGGAT+TGG - chr8_3:11975682-11975701 Msa1276970:CDS 20.0%
!! TAATTACAACCAATCTAAAT+TGG + chr8_3:11975770-11975789 None:intergenic 20.0%
!!! TTTAGATTGGTTGTAATTAT+TGG - chr8_3:11975771-11975790 Msa1276970:CDS 20.0%
!! AGACAATAAAAGTTCAATTA+TGG + chr8_3:11976374-11976393 None:intergenic 20.0%
!! TAAACAAATTGTTCATAAGT+CGG - chr8_3:11976407-11976426 Msa1276970:intron 20.0%
!!! TCAACCGTTTTAATTTTATA+TGG + chr8_3:11976585-11976604 None:intergenic 20.0%
!!! TTTTATTTTACATTCGGTTT+TGG - chr8_3:11977572-11977591 Msa1276970:CDS 20.0%
!!! TCGTTAATTTTGTTTCTTTA+AGG - chr8_3:11977597-11977616 Msa1276970:CDS 20.0%
!!! TTAATTTTGTTTCTTTAAGG+TGG - chr8_3:11977600-11977619 Msa1276970:CDS 20.0%
!!! TGGTTTTTTTATATTGTTGA+TGG - chr8_3:11977663-11977682 Msa1276970:CDS 20.0%
!! TGTTAAGTTTGATGTTTATA+AGG - chr8_3:11977809-11977828 Msa1276970:five_prime_UTR 20.0%
!! GTTTATAAGGTTTATGTTTA+TGG - chr8_3:11977822-11977841 Msa1276970:five_prime_UTR 20.0%
! TGTGAAATTTGTATTTGACT+TGG + chr8_3:11974738-11974757 None:intergenic 25.0%
!! TTATTTTCATCAAACAACCA+AGG - chr8_3:11974761-11974780 Msa1276970:three_prime_UTR 25.0%
!! TTTCTTTTTGCATTGAAATG+GGG + chr8_3:11974816-11974835 None:intergenic 25.0%
!! CTTTTCTTTTTGCATTGAAA+TGG + chr8_3:11974818-11974837 None:intergenic 25.0%
!!! GAAATGGTTTTTTTTGTGTT+TGG + chr8_3:11974883-11974902 None:intergenic 25.0%
!!! ATTTTGTTTGGAAATGGAAA+TGG + chr8_3:11974899-11974918 None:intergenic 25.0%
!!! ACATGCATTTGTTATTTTGA+TGG - chr8_3:11975377-11975396 Msa1276970:CDS 25.0%
! TCTCAATAGTTCCTTAAATT+TGG + chr8_3:11975469-11975488 None:intergenic 25.0%
!!! TGCTTTGTGATTTATTTTTC+TGG - chr8_3:11975625-11975644 Msa1276970:CDS 25.0%
!! TTTTCAGATCCAATTTAGAT+TGG - chr8_3:11975726-11975745 Msa1276970:CDS 25.0%
! GAAAAAGATCCAATTTAGAT+TGG - chr8_3:11975758-11975777 Msa1276970:CDS 25.0%
! TTTATAGATCCAATTGAAGT+TGG - chr8_3:11975800-11975819 Msa1276970:CDS 25.0%
!! TTGTAACCTTCAATTTTTCT+TGG - chr8_3:11976002-11976021 Msa1276970:CDS 25.0%
!! TGTAACCTTCAATTTTTCTT+GGG - chr8_3:11976003-11976022 Msa1276970:CDS 25.0%
! AAAAACCCAAGAAAAATTGA+AGG + chr8_3:11976011-11976030 None:intergenic 25.0%
!! TTCAATTTTTCTTGGGTTTT+TGG - chr8_3:11976010-11976029 Msa1276970:CDS 25.0%
! AAAAAACATGTTTGTTCCTT+TGG - chr8_3:11976093-11976112 Msa1276970:CDS 25.0%
! AAATTAGTTCAAAAATCGCA+TGG + chr8_3:11976191-11976210 None:intergenic 25.0%
! TGTTGTATATTTGCATGAAT+TGG - chr8_3:11976257-11976276 Msa1276970:intron 25.0%
! GTTTGATTAACCTATCATTA+TGG - chr8_3:11976292-11976311 Msa1276970:intron 25.0%
! TGGATTATTAATGAGCAATT+TGG + chr8_3:11976565-11976584 None:intergenic 25.0%
!!! TGTAGCTTTATTTACATAAC+CGG + chr8_3:11977542-11977561 None:intergenic 25.0%
! GTGGCCAATAAATTATTTAT+AGG - chr8_3:11977739-11977758 Msa1276970:CDS 25.0%
! GGATGATATAATTGTAAACT+TGG - chr8_3:11977843-11977862 Msa1276970:five_prime_UTR 25.0%
!! ACATGAATGATTTTGCTTTA+TGG - chr8_3:11977942-11977961 Msa1276970:five_prime_UTR 25.0%
! ATCTATACTCATATGATTCA+AGG + chr8_3:11977988-11978007 None:intergenic 25.0%
!! TGATTTTACGGTTTTATCCT+TGG + chr8_3:11974781-11974800 None:intergenic 30.0%
!! TGGTTGATTTTGTTTGGAAA+TGG + chr8_3:11974905-11974924 None:intergenic 30.0%
!! GAACAATGGTTGATTTTGTT+TGG + chr8_3:11974911-11974930 None:intergenic 30.0%
CAGAAGATTGAATTGAACAA+TGG + chr8_3:11974925-11974944 None:intergenic 30.0%
AGAGAGATAAAAAAGATGTG+TGG - chr8_3:11974995-11975014 Msa1276970:three_prime_UTR 30.0%
AAAAAAGGTTTCCTTGAACT+TGG + chr8_3:11975118-11975137 None:intergenic 30.0%
AAATCATCGTCAAGCAAAAA+AGG + chr8_3:11975133-11975152 None:intergenic 30.0%
! ATGATTTATGATTTTGTGGG+TGG - chr8_3:11975498-11975517 Msa1276970:CDS 30.0%
CAACTTAAACCAACTTCAAT+TGG + chr8_3:11975812-11975831 None:intergenic 30.0%
TTTATCAACCAGCAAAATAG+AGG + chr8_3:11976076-11976095 None:intergenic 30.0%
AATGAATTACTGAACACATG+TGG + chr8_3:11976167-11976186 None:intergenic 30.0%
CATTAGATCACCATAATGAT+AGG + chr8_3:11976305-11976324 None:intergenic 30.0%
CTATCATTATGGTGATCTAA+TGG - chr8_3:11976303-11976322 Msa1276970:intron 30.0%
! CAAACATGCATGTAATGTTT+TGG - chr8_3:11976493-11976512 Msa1276970:intron 30.0%
ACTAACTTTGAATGTGTTGT+AGG - chr8_3:11976643-11976662 Msa1276970:intron 30.0%
TTGTTTGAATTCAAAGCAAC+AGG + chr8_3:11976685-11976704 None:intergenic 30.0%
AAAGAGGAAGAATCAGTATA+GGG - chr8_3:11976729-11976748 Msa1276970:intron 30.0%
! ACTTTTCTTGATACGTTTTG+AGG + chr8_3:11976938-11976957 None:intergenic 30.0%
GGAAACCAAATGTTCAATTT+CGG - chr8_3:11977006-11977025 Msa1276970:intron 30.0%
TTGATTATTCTGATCTATGC+TGG - chr8_3:11977190-11977209 Msa1276970:intron 30.0%
TGATTATTCTGATCTATGCT+GGG - chr8_3:11977191-11977210 Msa1276970:intron 30.0%
! TTTGCAGAATCATTTTGCAT+AGG + chr8_3:11977327-11977346 None:intergenic 30.0%
CCTGAAAATAGTTCATAGTA+TGG + chr8_3:11977638-11977657 None:intergenic 30.0%
! CCATACTATGAACTATTTTC+AGG - chr8_3:11977635-11977654 Msa1276970:CDS 30.0%
!! TGAACTATTTTCAGGATTGT+TGG - chr8_3:11977643-11977662 Msa1276970:CDS 30.0%
! AAGGTTTTTGACAAGACAAA+AGG + chr8_3:11977781-11977800 None:intergenic 30.0%
CAAACTTAACAATCCTGAAA+AGG + chr8_3:11977800-11977819 None:intergenic 30.0%
! ACAAATTTTCTCCCTTTGTT+TGG - chr8_3:11977899-11977918 Msa1276970:five_prime_UTR 30.0%
! AATGATTTTGCTTTATGGTG+TGG - chr8_3:11977947-11977966 Msa1276970:five_prime_UTR 30.0%
! TGGGTGATTAGGTGATTTTA+CGG + chr8_3:11974793-11974812 None:intergenic 35.0%
! TTTTTGCATTGAAATGGGGT+GGG + chr8_3:11974812-11974831 None:intergenic 35.0%
GAGATAAAAAAGATGTGTGG+TGG - chr8_3:11974998-11975017 Msa1276970:three_prime_UTR 35.0%
! AGGATGAAGATGATGATGAA+GGG - chr8_3:11975203-11975222 Msa1276970:intron 35.0%
!! GGAAGATTTGCTGTTCTTAT+TGG + chr8_3:11975263-11975282 None:intergenic 35.0%
AAAACAGTTACCACGAACAA+AGG + chr8_3:11975290-11975309 None:intergenic 35.0%
! TGAACTTTCCTCTATTTTGC+TGG - chr8_3:11976065-11976084 Msa1276970:CDS 35.0%
TAAAAATCAGCCAAAGCCAA+AGG + chr8_3:11976112-11976131 None:intergenic 35.0%
TTCATAAGTCGGTAGTGATT+TGG - chr8_3:11976418-11976437 Msa1276970:intron 35.0%
!! CTAGTCTTTTGCTTCTGTTT+TGG - chr8_3:11976462-11976481 Msa1276970:intron 35.0%
! ATTAATGAGCAATTTGGAGC+AGG + chr8_3:11976559-11976578 None:intergenic 35.0%
TTCAAACAAGCTAGCTGAAA+AGG - chr8_3:11976696-11976715 Msa1276970:intron 35.0%
AAAAGGATTCGAAGAGAAAG+AGG - chr8_3:11976713-11976732 Msa1276970:intron 35.0%
GAAAGAGGAAGAATCAGTAT+AGG - chr8_3:11976728-11976747 Msa1276970:intron 35.0%
AAGAGGAAGAATCAGTATAG+GGG - chr8_3:11976730-11976749 Msa1276970:intron 35.0%
! TTGAACATTTGGTTTCCGTT+TGG + chr8_3:11977003-11977022 None:intergenic 35.0%
TTTCGCCGAAATTGAACATT+TGG + chr8_3:11977014-11977033 None:intergenic 35.0%
GTTCAATTTCGGCGAAAATA+TGG - chr8_3:11977017-11977036 Msa1276970:intron 35.0%
GATTATTCTGATCTATGCTG+GGG - chr8_3:11977192-11977211 Msa1276970:intron 35.0%
!!! CGTGGAGTTTTATTTTCTTG+TGG - chr8_3:11977720-11977739 Msa1276970:CDS 35.0%
! GTCTTGTCAAAAACCTTTTC+AGG - chr8_3:11977784-11977803 Msa1276970:exon 35.0%
!! AATTTTCTCCCTTTGTTTGG+TGG - chr8_3:11977902-11977921 Msa1276970:five_prime_UTR 35.0%
!! ATTTTCTCCCTTTGTTTGGT+GGG - chr8_3:11977903-11977922 Msa1276970:five_prime_UTR 35.0%
AATCATACCCACCAAACAAA+GGG + chr8_3:11977913-11977932 None:intergenic 35.0%
AAATCATACCCACCAAACAA+AGG + chr8_3:11977914-11977933 None:intergenic 35.0%
! CTTTTTGCATTGAAATGGGG+TGG + chr8_3:11974813-11974832 None:intergenic 40.0%
CTTGGTTTCCTCCTCAAATT+CGG + chr8_3:11975100-11975119 None:intergenic 40.0%
TTTGCTTGACGATGATTTCG+AGG - chr8_3:11975135-11975154 Msa1276970:intron 40.0%
TTCTGATTTCGATGAAGACG+AGG - chr8_3:11975183-11975202 Msa1276970:intron 40.0%
! GAGGATGAAGATGATGATGA+AGG - chr8_3:11975202-11975221 Msa1276970:intron 40.0%
! AGATGATGATGAAGGGTTGT+TGG - chr8_3:11975210-11975229 Msa1276970:intron 40.0%
GCTGTTCTTATTGGAACCAA+AGG + chr8_3:11975254-11975273 None:intergenic 40.0%
! CATGTTTGTTCCTTTGGCTT+TGG - chr8_3:11976099-11976118 Msa1276970:CDS 40.0%
TACTGAACACATGTGGTGAT+TGG + chr8_3:11976160-11976179 None:intergenic 40.0%
!!! ATACGTTTTGAGGAAGCAAC+TGG + chr8_3:11976928-11976947 None:intergenic 40.0%
!! CTGAGCTCTTTAAAGCCAAA+CGG - chr8_3:11976985-11977004 Msa1276970:intron 40.0%
!! GGAGAACTACTTTTCTCCTA+TGG - chr8_3:11977038-11977057 Msa1276970:intron 40.0%
! CTTTTCTCCTATGGATCAAG+TGG - chr8_3:11977047-11977066 Msa1276970:intron 40.0%
TTCTGTTCCACTTGATCCAT+AGG + chr8_3:11977057-11977076 None:intergenic 40.0%
TCAAGTGGAACAGAAACCAT+TGG - chr8_3:11977062-11977081 Msa1276970:intron 40.0%
! GCATACTGGTTGTTAACCAA+TGG + chr8_3:11977081-11977100 None:intergenic 40.0%
AACAACCAGTATGCTGACAT+CGG - chr8_3:11977087-11977106 Msa1276970:intron 40.0%
! GACGAAATCTCAGGTGTTTT+TGG + chr8_3:11977228-11977247 None:intergenic 40.0%
GAAAACACAGACGAAATCTC+AGG + chr8_3:11977237-11977256 None:intergenic 40.0%
AGTTCTTCGAGAACGATAAC+TGG - chr8_3:11977388-11977407 Msa1276970:intron 40.0%
TAACTGGAGTGATGCTTCAT+TGG - chr8_3:11977404-11977423 Msa1276970:intron 40.0%
! GTTTTCTAAACAACGTCACC+TGG - chr8_3:11977516-11977535 Msa1276970:CDS 40.0%
! CTTTATTTACATAACCGGCC+AGG + chr8_3:11977537-11977556 None:intergenic 40.0%
!! TACCAGCTTTAAGTAAAGCG+TGG - chr8_3:11977702-11977721 Msa1276970:CDS 40.0%
TTGAAATGGGGTGGGTGATT+AGG + chr8_3:11974804-11974823 None:intergenic 45.0%
ATATCCTCTGGCCGAATTTG+AGG - chr8_3:11975086-11975105 Msa1276970:three_prime_UTR 45.0%
TGAGGAGGAAACCAAGTTCA+AGG - chr8_3:11975104-11975123 Msa1276970:three_prime_UTR 45.0%
TTGACGATGATTTCGAGGCT+GGG - chr8_3:11975140-11975159 Msa1276970:intron 45.0%
GATGATGAAGGGTTGTTGGT+CGG - chr8_3:11975214-11975233 Msa1276970:intron 45.0%
GGTGTCAAAGGTTTCACCTT+TGG - chr8_3:11975235-11975254 Msa1276970:three_prime_UTR 45.0%
TCTTCCAAGTCCTTTGTTCG+TGG - chr8_3:11975277-11975296 Msa1276970:CDS 45.0%
GTTACCACGAACAAAGGACT+TGG + chr8_3:11975284-11975303 None:intergenic 45.0%
! ATTTTCCCCATGGACGTTGA+CGG + chr8_3:11976759-11976778 None:intergenic 45.0%
TCAACGTCCATGGGGAAAAT+GGG - chr8_3:11976759-11976778 Msa1276970:intron 45.0%
GAGCTTATGATGCTGAAGCT+AGG - chr8_3:11976857-11976876 Msa1276970:intron 45.0%
CTCTTCAGGGAAATTCACCT+TGG + chr8_3:11976902-11976921 None:intergenic 45.0%
CAAGGTGAATTTCCCTGAAG+AGG - chr8_3:11976900-11976919 Msa1276970:intron 45.0%
TGTAAGTTGCACTCCGTTTC+CGG + chr8_3:11977121-11977140 None:intergenic 45.0%
TATGCTGTCTGACAACACTC+AGG - chr8_3:11977293-11977312 Msa1276970:intron 45.0%
GTTCTCGAAGAACTTCAGCT+GGG + chr8_3:11977382-11977401 None:intergenic 45.0%
GTGGAAACACAATGAACCTC+TGG - chr8_3:11977460-11977479 Msa1276970:intron 45.0%
TTAGAAAACATCGCCTGCGA+TGG + chr8_3:11977505-11977524 None:intergenic 45.0%
CTCCACGCTTTACTTAAAGC+TGG + chr8_3:11977707-11977726 None:intergenic 45.0%
CTTGACGATGATTTCGAGGC+TGG - chr8_3:11975139-11975158 Msa1276970:intron 50.0%
GGCTGGGTTCAGAGAGTTTA+AGG - chr8_3:11975156-11975175 Msa1276970:intron 50.0%
GTCAACGTCCATGGGGAAAA+TGG - chr8_3:11976758-11976777 Msa1276970:intron 50.0%
AGACACGGACTCCTTTCCTT+GGG + chr8_3:11976801-11976820 None:intergenic 50.0%
TGAAAGTTCCGAGCCAGACA+CGG + chr8_3:11976816-11976835 None:intergenic 50.0%
AATCCGTGGCAAGAAAGCCA+AGG - chr8_3:11976882-11976901 Msa1276970:intron 50.0%
! TCACCTTGGCTTTCTTGCCA+CGG + chr8_3:11976888-11976907 None:intergenic 50.0%
AAGCAACTGGAGCCTCTTCA+GGG + chr8_3:11976915-11976934 None:intergenic 50.0%
TCATTCAACAGCTGCGTCTC+AGG + chr8_3:11976961-11976980 None:intergenic 50.0%
! GTTTTCTGCTGCTGCTCCTA+TGG - chr8_3:11977251-11977270 Msa1276970:intron 50.0%
! GTCTGAGATTCGCCTTCCAT+AGG + chr8_3:11977270-11977289 None:intergenic 50.0%
TTCTGCAAAGACCCTCTCTG+AGG - chr8_3:11977338-11977357 Msa1276970:intron 50.0%
CGTTCTCGAAGAACTTCAGC+TGG + chr8_3:11977383-11977402 None:intergenic 50.0%
! GCTTCATTGGCTGCTTTGCT+TGG - chr8_3:11977417-11977436 Msa1276970:intron 50.0%
! TCATTGGCTGCTTTGCTTGG+TGG - chr8_3:11977420-11977439 Msa1276970:intron 50.0%
AAAACATCGCCTGCGATGGA+AGG + chr8_3:11977501-11977520 None:intergenic 50.0%
TCTAAACAACGTCACCTGGC+CGG - chr8_3:11977520-11977539 Msa1276970:CDS 50.0%
CTCCGACTTCATTCCAGCTG+CGG - chr8_3:11975030-11975049 Msa1276970:three_prime_UTR 55.0%
AGAGGATATCCGCCGTGACA+CGG + chr8_3:11975075-11975094 None:intergenic 55.0%
TCCTCTGGCCGAATTTGAGG+AGG - chr8_3:11975089-11975108 Msa1276970:three_prime_UTR 55.0%
TCCTCCTCAAATTCGGCCAG+AGG + chr8_3:11975093-11975112 None:intergenic 55.0%
!! GGGTTGTTGGTCGGTGTCAA+AGG - chr8_3:11975223-11975242 Msa1276970:intron 55.0%
GGGTATCCGTCAACGTCCAT+GGG - chr8_3:11976750-11976769 Msa1276970:intron 55.0%
GGTATCCGTCAACGTCCATG+GGG - chr8_3:11976751-11976770 Msa1276970:intron 55.0%
! TCAGCTGCCCATTTTCCCCA+TGG + chr8_3:11976769-11976788 None:intergenic 55.0%
GAGATCCGTGACCCAAGGAA+AGG - chr8_3:11976787-11976806 Msa1276970:intron 55.0%
GGACTCCTTTCCTTGGGTCA+CGG + chr8_3:11976795-11976814 None:intergenic 55.0%
CAGACACGGACTCCTTTCCT+TGG + chr8_3:11976802-11976821 None:intergenic 55.0%
CAAGGAAAGGAGTCCGTGTC+TGG - chr8_3:11976800-11976819 Msa1276970:intron 55.0%
AAAGGAGTCCGTGTCTGGCT+CGG - chr8_3:11976805-11976824 Msa1276970:intron 55.0%
GCTGAAGCTAGGAGAATCCG+TGG - chr8_3:11976868-11976887 Msa1276970:intron 55.0%
GAAGCAACTGGAGCCTCTTC+AGG + chr8_3:11976916-11976935 None:intergenic 55.0%
AGGCTCCGATGTCAGCATAC+TGG + chr8_3:11977095-11977114 None:intergenic 55.0%
ATCGGAGCCTTCTCCGGAAA+CGG - chr8_3:11977105-11977124 Msa1276970:intron 55.0%
TTGCACTCCGTTTCCGGAGA+AGG + chr8_3:11977115-11977134 None:intergenic 55.0%
GATCTATGCTGGGGCGAACA+AGG - chr8_3:11977201-11977220 Msa1276970:intron 55.0%
TCTGCTGCTGCTCCTATGGA+AGG - chr8_3:11977255-11977274 Msa1276970:intron 55.0%
ATCTGCGAGCTCCTCAGAGA+GGG + chr8_3:11977352-11977371 None:intergenic 55.0%
TATCTGCGAGCTCCTCAGAG+AGG + chr8_3:11977353-11977372 None:intergenic 55.0%
! GCTTGGTGGAGACACAACTC+AGG - chr8_3:11977434-11977453 Msa1276970:intron 55.0%
GGTGGAGACACAACTCAGGA+TGG - chr8_3:11977438-11977457 Msa1276970:intron 55.0%
GGAGACACAACTCAGGATGG+TGG - chr8_3:11977441-11977460 Msa1276970:intron 55.0%
GCAGGTCATCGAAGTTCCAG+AGG + chr8_3:11977479-11977498 None:intergenic 55.0%
CGCCGCAGCTGGAATGAAGT+CGG + chr8_3:11975035-11975054 None:intergenic 60.0%
CGACTTCATTCCAGCTGCGG+CGG - chr8_3:11975033-11975052 Msa1276970:three_prime_UTR 60.0%
GTGTCACGGCGGATATCCTC+TGG - chr8_3:11975074-11975093 Msa1276970:three_prime_UTR 60.0%
! GGGGTATCCGTCAACGTCCA+TGG - chr8_3:11976749-11976768 Msa1276970:intron 60.0%
CAGCTGAGATCCGTGACCCA+AGG - chr8_3:11976782-11976801 Msa1276970:intron 60.0%
GCTGACATCGGAGCCTTCTC+CGG - chr8_3:11977099-11977118 Msa1276970:intron 60.0%
GATGACCTGCCTTCCATCGC+AGG - chr8_3:11977489-11977508 Msa1276970:intron 60.0%
CTTCATTCCAGCTGCGGCGG+CGG - chr8_3:11975036-11975055 Msa1276970:three_prime_UTR 65.0%
GATATCCGCCGTGACACGGC+GGG + chr8_3:11975071-11975090 None:intergenic 65.0%
GGATATCCGCCGTGACACGG+CGG + chr8_3:11975072-11975091 None:intergenic 65.0%
CATCGCCTGCGATGGAAGGC+AGG + chr8_3:11977497-11977516 None:intergenic 65.0%
ATTCCAGCTGCGGCGGCGGT+GGG - chr8_3:11975040-11975059 Msa1276970:three_prime_UTR 70.0%
GGGTGGTTCCCGCCGTGTCA+CGG - chr8_3:11975060-11975079 Msa1276970:three_prime_UTR 70.0%
TGGTTCCCGCCGTGTCACGG+CGG - chr8_3:11975063-11975082 Msa1276970:three_prime_UTR 70.0%
CATTCCAGCTGCGGCGGCGG+TGG - chr8_3:11975039-11975058 Msa1276970:three_prime_UTR 75.0%
! CCACCCACCGCCGCCGCAGC+TGG + chr8_3:11975046-11975065 None:intergenic 85.0%
! CCAGCTGCGGCGGCGGTGGG+TGG - chr8_3:11975043-11975062 Msa1276970:three_prime_UTR 85.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 11974704 11978093 11974704 ID=Msa1276970;Name=Msa1276970
chr8_3 mRNA 11974704 11978093 11974704 ID=Msa1276970-mRNA-1;Parent=Msa1276970;Name=Msa1276970-mRNA-1;_AED=0.04;_eAED=0.04;_QI=306|1|1|1|0.5|0.33|3|475|382
chr8_3 exon 11974704 11975140 11974704 ID=Msa1276970-mRNA-1:exon:4823;Parent=Msa1276970-mRNA-1
chr8_3 exon 11975235 11976132 11975235 ID=Msa1276970-mRNA-1:exon:4822;Parent=Msa1276970-mRNA-1
chr8_3 exon 11977499 11978093 11977499 ID=Msa1276970-mRNA-1:exon:4821;Parent=Msa1276970-mRNA-1
chr8_3 five_prime_UTR 11977788 11978093 11977788 ID=Msa1276970-mRNA-1:five_prime_utr;Parent=Msa1276970-mRNA-1
chr8_3 CDS 11977499 11977787 11977499 ID=Msa1276970-mRNA-1:cds;Parent=Msa1276970-mRNA-1
chr8_3 CDS 11975273 11976132 11975273 ID=Msa1276970-mRNA-1:cds;Parent=Msa1276970-mRNA-1
chr8_3 three_prime_UTR 11975235 11975272 11975235 ID=Msa1276970-mRNA-1:three_prime_utr;Parent=Msa1276970-mRNA-1
chr8_3 three_prime_UTR 11974704 11975140 11974704 ID=Msa1276970-mRNA-1:three_prime_utr;Parent=Msa1276970-mRNA-1
Gene Sequence

>Msa1276970

ATGTGTGGTGGAGCTATTATCTCCGACTTCATTCCAGCTGCGGCGGCGGTGGGTGGTTCCCGCCGTGTCACGGCGGATATCCTCTGGCCGAATTTGAGGAGGAAACCAAGTTCAAGGAAACCTTTTTTGCTTGACGATGATTTCGAGGCTGGGTTCAGAGAGTTTAAGGATGATTCTGATTTCGATGAAGACGAGGATGAAGATGATGATGAAGGGTTGTTGGTCGGTGTCAAAGGTTTCACCTTTGGTTCCAATAAGAACAGCAAATCTTCCAAGTCCTTTGTTCGTGGATCAAGTGCTGCAAAACCTGTTGCTTTGAATTCAAACAAGCTAGCTGAAAAGGATTCGAAGAGAAAGAGGAAGAATCAGTATAGGGGTATCCGTCAACGTCCATGGGGAAAATGGGCAGCTGAGATCCGTGACCCAAGGAAAGGAGTCCGTGTCTGGCTCGGAACTTTCAACACTGCTGAAGAAGCTGCAAGAGCTTATGATGCTGAAGCTAGGAGAATCCGTGGCAAGAAAGCCAAGGTGAATTTCCCTGAAGAGGCTCCAGTTGCTTCCTCAAAACGTATCAAGAAAAGTCCTGAGACGCAGCTGTTGAATGAAAATCTGAGCTCTTTAAAGCCAAACGGAAACCAAATGTTCAATTTCGGCGAAAATATGGAGAACTACTTTTCTCCTATGGATCAAGTGGAACAGAAACCATTGGTTAACAACCAGTATGCTGACATCGGAGCCTTCTCCGGAAACGGAGTGCAACTTACATCTGCTGATGTTAATGCTTATTTCAGTTCAGAGCATTCAAGCAATTCATTTGATTATTCTGATCTATGCTGGGGCGAACAAGGTCCAAAAACACCTGAGATTTCGTCTGTGTTTTCTGCTGCTGCTCCTATGGAAGGCGAATCTCAGACGAATATGCTGTCTGACAACACTCAGGATATGCTGCCTATGCAAAATGATTCTGCAAAGACCCTCTCTGAGGAGCTCGCAGATATCGAATCCCAGCTGAAGTTCTTCGAGAACGATAACTGGAGTGATGCTTCATTGGCTGCTTTGCTTGGTGGAGACACAACTCAGGATGGTGGAAACACAATGAACCTCTGGAACTTCGATGACCTGCCTTCCATCGCAGGCGATGTTTTCTAA
Protein sequence

>Msa1276970

MCGGAIISDFIPAAAAVGGSRRVTADILWPNLRRKPSSRKPFLLDDDFEAGFREFKDDSDFDEDEDEDDDEGLLVGVKGFTFGSNKNSKSSKSFVRGSSAAKPVALNSNKLAEKDSKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDAEARRIRGKKAKVNFPEEAPVASSKRIKKSPETQLLNENLSSLKPNGNQMFNFGENMENYFSPMDQVEQKPLVNNQYADIGAFSGNGVQLTSADVNAYFSSEHSSNSFDYSDLCWGEQGPKTPEISSVFSAAAPMEGESQTNMLSDNTQDMLPMQNDSAKTLSEELADIESQLKFFENDNWSDASLAALLGGDTTQDGGNTMNLWNFDDLPSIAGDVF*