Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0524430 | GAU33646.1 | 97.527 | 283 | 6 | 1 | 1 | 282 | 1 | 283 | 0.0 | 553 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0524430 | sp|P93004|PIP27_ARATH | 89.716 | 282 | 27 | 1 | 1 | 282 | 1 | 280 | 0.0 | 514 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0524430 | A0A2Z6MMA4 | 97.527 | 283 | 6 | 1 | 1 | 282 | 1 | 283 | 0.0 | 553 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0006840 | Msa0524430 | 0.809482 | 1.851674e-50 | -8.615850e-47 |
Msa0015570 | Msa0524430 | 0.805519 | 1.283752e-49 | -8.615850e-47 |
Msa0016530 | Msa0524430 | 0.805882 | 1.076883e-49 | -8.615850e-47 |
Msa0018920 | Msa0524430 | 0.819540 | 1.100745e-52 | -8.615850e-47 |
Msa0027800 | Msa0524430 | 0.807463 | 4.993029e-50 | -8.615850e-47 |
Msa0030070 | Msa0524430 | 0.840077 | 1.080128e-57 | -8.615850e-47 |
Msa0030690 | Msa0524430 | 0.811104 | 8.273216e-51 | -8.615850e-47 |
Msa0032980 | Msa0524430 | 0.886775 | 2.548688e-72 | -8.615850e-47 |
Msa0033780 | Msa0524430 | 0.833846 | 4.216917e-56 | -8.615850e-47 |
Msa0040640 | Msa0524430 | 0.821893 | 3.169571e-53 | -8.615850e-47 |
Msa0049450 | Msa0524430 | 0.805962 | 1.036203e-49 | -8.615850e-47 |
Msa0050150 | Msa0524430 | 0.808729 | 2.684771e-50 | -8.615850e-47 |
Msa0062340 | Msa0524430 | 0.807334 | 5.317968e-50 | -8.615850e-47 |
Msa0063190 | Msa0524430 | 0.805982 | 1.026039e-49 | -8.615850e-47 |
Msa0067380 | Msa0524430 | 0.827977 | 1.161140e-54 | -8.615850e-47 |
Msa0072520 | Msa0524430 | 0.828466 | 8.852275e-55 | -8.615850e-47 |
Msa0078130 | Msa0524430 | 0.810513 | 1.110281e-50 | -8.615850e-47 |
Msa0078500 | Msa0524430 | 0.801544 | 8.565723e-49 | -8.615850e-47 |
Msa0080440 | Msa0524430 | 0.818187 | 2.234093e-52 | -8.615850e-47 |
Msa0084990 | Msa0524430 | 0.803844 | 2.870847e-49 | -8.615850e-47 |
Msa0090440 | Msa0524430 | 0.800123 | 1.670320e-48 | -8.615850e-47 |
Msa0091350 | Msa0524430 | 0.899224 | 2.449862e-77 | -8.615850e-47 |
Msa0093860 | Msa0524430 | 0.878783 | 2.123343e-69 | -8.615850e-47 |
Msa0098410 | Msa0524430 | 0.814998 | 1.157925e-51 | -8.615850e-47 |
Msa0100600 | Msa0524430 | 0.803216 | 3.875044e-49 | -8.615850e-47 |
Msa0106630 | Msa0524430 | 0.826781 | 2.246992e-54 | -8.615850e-47 |
Msa0113410 | Msa0524430 | 0.805804 | 1.118240e-49 | -8.615850e-47 |
Msa0125590 | Msa0524430 | 0.846715 | 1.824737e-59 | -8.615850e-47 |
Msa0126210 | Msa0524430 | 0.808697 | 2.727365e-50 | -8.615850e-47 |
Msa0127340 | Msa0524430 | 0.894595 | 2.127960e-75 | -8.615850e-47 |
Msa0127680 | Msa0524430 | 0.829878 | 4.024050e-55 | -8.615850e-47 |
Msa0128570 | Msa0524430 | 0.845000 | 5.334127e-59 | -8.615850e-47 |
Msa0140380 | Msa0524430 | 0.845658 | 3.540079e-59 | -8.615850e-47 |
Msa0153210 | Msa0524430 | 0.831730 | 1.414272e-55 | -8.615850e-47 |
Msa0156050 | Msa0524430 | 0.830797 | 2.398607e-55 | -8.615850e-47 |
Msa0156090 | Msa0524430 | 0.832190 | 1.088831e-55 | -8.615850e-47 |
Msa0160160 | Msa0524430 | 0.811525 | 6.704231e-51 | -8.615850e-47 |
Msa0160170 | Msa0524430 | 0.821866 | 3.215039e-53 | -8.615850e-47 |
Msa0160290 | Msa0524430 | 0.816877 | 4.407816e-52 | -8.615850e-47 |
Msa0161930 | Msa0524430 | 0.814113 | 1.817684e-51 | -8.615850e-47 |
Msa0165830 | Msa0524430 | 0.887689 | 1.144803e-72 | -8.615850e-47 |
Msa0166170 | Msa0524430 | 0.807666 | 4.522617e-50 | -8.615850e-47 |
Msa0170070 | Msa0524430 | 0.843496 | 1.352420e-58 | -8.615850e-47 |
Msa0174650 | Msa0524430 | 0.841148 | 5.665280e-58 | -8.615850e-47 |
Msa0184700 | Msa0524430 | 0.817481 | 3.225461e-52 | -8.615850e-47 |
Msa0186180 | Msa0524430 | 0.823012 | 1.741702e-53 | -8.615850e-47 |
Msa0187040 | Msa0524430 | 0.806941 | 6.439812e-50 | -8.615850e-47 |
Msa0204970 | Msa0524430 | 0.841191 | 5.519245e-58 | -8.615850e-47 |
Msa0225800 | Msa0524430 | 0.810831 | 9.479264e-51 | -8.615850e-47 |
Msa0233020 | Msa0524430 | 0.803344 | 3.645708e-49 | -8.615850e-47 |
Msa0368860 | Msa0524430 | 0.819333 | 1.227208e-52 | -8.615850e-47 |
Msa0373170 | Msa0524430 | 0.854316 | 1.334575e-61 | -8.615850e-47 |
Msa0373590 | Msa0524430 | 0.822422 | 2.389428e-53 | -8.615850e-47 |
Msa0381730 | Msa0524430 | 0.818657 | 1.748436e-52 | -8.615850e-47 |
Msa0382740 | Msa0524430 | 0.817157 | 3.813686e-52 | -8.615850e-47 |
Msa0382770 | Msa0524430 | 0.812285 | 4.579180e-51 | -8.615850e-47 |
Msa0383000 | Msa0524430 | 0.824137 | 9.498731e-54 | -8.615850e-47 |
Msa0405080 | Msa0524430 | 0.808186 | 3.505395e-50 | -8.615850e-47 |
Msa0412130 | Msa0524430 | 0.811364 | 7.263982e-51 | -8.615850e-47 |
Msa0415820 | Msa0524430 | 0.805184 | 1.508657e-49 | -8.615850e-47 |
Msa0416160 | Msa0524430 | 0.811919 | 5.503260e-51 | -8.615850e-47 |
Msa0419450 | Msa0524430 | 0.817916 | 2.572270e-52 | -8.615850e-47 |
Msa0420430 | Msa0524430 | 0.862173 | 6.112739e-64 | -8.615850e-47 |
Msa0420670 | Msa0524430 | 0.835067 | 2.081592e-56 | -8.615850e-47 |
Msa0421130 | Msa0524430 | 0.818752 | 1.663585e-52 | -8.615850e-47 |
Msa0421750 | Msa0524430 | 0.852788 | 3.667144e-61 | -8.615850e-47 |
Msa0431200 | Msa0524430 | 0.826835 | 2.181571e-54 | -8.615850e-47 |
Msa0432690 | Msa0524430 | 0.812663 | 3.785299e-51 | -8.615850e-47 |
Msa0433150 | Msa0524430 | 0.821691 | 3.529064e-53 | -8.615850e-47 |
Msa0433760 | Msa0524430 | 0.835462 | 1.654844e-56 | -8.615850e-47 |
Msa0434360 | Msa0524430 | 0.812494 | 4.121029e-51 | -8.615850e-47 |
Msa0443410 | Msa0524430 | 0.829412 | 5.223260e-55 | -8.615850e-47 |
Msa0443570 | Msa0524430 | 0.843969 | 1.010515e-58 | -8.615850e-47 |
Msa0461550 | Msa0524430 | 0.810566 | 1.081492e-50 | -8.615850e-47 |
Msa0466520 | Msa0524430 | 0.888568 | 5.262064e-73 | -8.615850e-47 |
Msa0466880 | Msa0524430 | 0.819520 | 1.112726e-52 | -8.615850e-47 |
Msa0467690 | Msa0524430 | 0.853253 | 2.699335e-61 | -8.615850e-47 |
Msa0468700 | Msa0524430 | 0.801134 | 1.039340e-48 | -8.615850e-47 |
Msa0477630 | Msa0524430 | 0.825773 | 3.903601e-54 | -8.615850e-47 |
Msa0478140 | Msa0524430 | 0.817832 | 2.687286e-52 | -8.615850e-47 |
Msa0478200 | Msa0524430 | 0.816729 | 4.759408e-52 | -8.615850e-47 |
Msa0480730 | Msa0524430 | 0.839820 | 1.260487e-57 | -8.615850e-47 |
Msa0241040 | Msa0524430 | 0.812863 | 3.421850e-51 | -8.615850e-47 |
Msa0249870 | Msa0524430 | 0.842885 | 1.967316e-58 | -8.615850e-47 |
Msa0260630 | Msa0524430 | 0.840350 | 9.169484e-58 | -8.615850e-47 |
Msa0272260 | Msa0524430 | 0.814605 | 1.415284e-51 | -8.615850e-47 |
Msa0276730 | Msa0524430 | 0.839777 | 1.293671e-57 | -8.615850e-47 |
Msa0278840 | Msa0524430 | 0.840954 | 6.368118e-58 | -8.615850e-47 |
Msa0281540 | Msa0524430 | 0.848965 | 4.378978e-60 | -8.615850e-47 |
Msa0305770 | Msa0524430 | 0.802461 | 5.550454e-49 | -8.615850e-47 |
Msa0316630 | Msa0524430 | 0.837142 | 6.188734e-57 | -8.615850e-47 |
Msa0320580 | Msa0524430 | 0.854272 | 1.374205e-61 | -8.615850e-47 |
Msa0331110 | Msa0524430 | 0.825111 | 5.600811e-54 | -8.615850e-47 |
Msa0341680 | Msa0524430 | 0.893974 | 3.810799e-75 | -8.615850e-47 |
Msa0344110 | Msa0524430 | 0.854284 | 1.364130e-61 | -8.615850e-47 |
Msa0349550 | Msa0524430 | 0.862311 | 5.544499e-64 | -8.615850e-47 |
Msa0485980 | Msa0524430 | 0.810393 | 1.178682e-50 | -8.615850e-47 |
Msa0506880 | Msa0524430 | 0.810094 | 1.367282e-50 | -8.615850e-47 |
Msa0507810 | Msa0524430 | 0.843499 | 1.349758e-58 | -8.615850e-47 |
Msa0507820 | Msa0524430 | 0.825071 | 5.724641e-54 | -8.615850e-47 |
Msa0507920 | Msa0524430 | 0.848629 | 5.427146e-60 | -8.615850e-47 |
Msa0512530 | Msa0524430 | 0.833517 | 5.097481e-56 | -8.615850e-47 |
Msa0513080 | Msa0524430 | 0.852576 | 4.216678e-61 | -8.615850e-47 |
Msa0513560 | Msa0524430 | 0.827928 | 1.193090e-54 | -8.615850e-47 |
Msa0514020 | Msa0524430 | 0.850827 | 1.319895e-60 | -8.615850e-47 |
Msa0520260 | Msa0524430 | 0.813832 | 2.096206e-51 | -8.615850e-47 |
Msa0520870 | Msa0524430 | 0.825638 | 4.202964e-54 | -8.615850e-47 |
Msa0521320 | Msa0524430 | 0.823804 | 1.136982e-53 | -8.615850e-47 |
Msa0521680 | Msa0524430 | 0.829266 | 5.666618e-55 | -8.615850e-47 |
Msa0523380 | Msa0524430 | 0.809236 | 2.090416e-50 | -8.615850e-47 |
Msa0524320 | Msa0524430 | 0.996468 | 6.389227e-228 | -8.615850e-47 |
Msa0524430 | Msa0524520 | 0.805661 | 1.198547e-49 | -8.615850e-47 |
Msa0524430 | Msa0524800 | 0.808383 | 3.182016e-50 | -8.615850e-47 |
Msa0524430 | Msa0525000 | 0.817234 | 3.664923e-52 | -8.615850e-47 |
Msa0524430 | Msa0527850 | 0.846152 | 2.598983e-59 | -8.615850e-47 |
Msa0524430 | Msa0534100 | 0.817373 | 3.411014e-52 | -8.615850e-47 |
Msa0524430 | Msa0537990 | 0.808748 | 2.658750e-50 | -8.615850e-47 |
Msa0524430 | Msa0541740 | 0.835248 | 1.873955e-56 | -8.615850e-47 |
Msa0524430 | Msa0544410 | 0.818844 | 1.585711e-52 | -8.615850e-47 |
Msa0524430 | Msa0550590 | 0.821363 | 4.200733e-53 | -8.615850e-47 |
Msa0524430 | Msa0553210 | 0.803994 | 2.672821e-49 | -8.615850e-47 |
Msa0524430 | Msa0553750 | 0.860538 | 1.926544e-63 | -8.615850e-47 |
Msa0524430 | Msa0554300 | 0.863731 | 2.019066e-64 | -8.615850e-47 |
Msa0524430 | Msa0557850 | 0.845069 | 5.110483e-59 | -8.615850e-47 |
Msa0524430 | Msa0559100 | 0.809820 | 1.566122e-50 | -8.615850e-47 |
Msa0524430 | Msa0560570 | 0.858800 | 6.423972e-63 | -8.615850e-47 |
Msa0524430 | Msa0561560 | 0.865385 | 6.137027e-65 | -8.615850e-47 |
Msa0524430 | Msa0563900 | 0.826482 | 2.647502e-54 | -8.615850e-47 |
Msa0524430 | Msa0564980 | 0.828347 | 9.456667e-55 | -8.615850e-47 |
Msa0524430 | Msa0571620 | 0.855512 | 6.003102e-62 | -8.615850e-47 |
Msa0524430 | Msa0572830 | 0.844228 | 8.608900e-59 | -8.615850e-47 |
Msa0524430 | Msa0575710 | 0.838944 | 2.127741e-57 | -8.615850e-47 |
Msa0524430 | Msa0577280 | 0.802662 | 5.044499e-49 | -8.615850e-47 |
Msa0524430 | Msa0577330 | 0.805733 | 1.157394e-49 | -8.615850e-47 |
Msa0524430 | Msa0582460 | 0.827362 | 1.631446e-54 | -8.615850e-47 |
Msa0524430 | Msa0586200 | 0.836373 | 9.723484e-57 | -8.615850e-47 |
Msa0524430 | Msa0590200 | 0.801219 | 9.985025e-49 | -8.615850e-47 |
Msa0524430 | Msa0606100 | 0.819218 | 1.303353e-52 | -8.615850e-47 |
Msa0524430 | Msa0607330 | 0.831396 | 1.709865e-55 | -8.615850e-47 |
Msa0524430 | Msa0607800 | 0.851082 | 1.119025e-60 | -8.615850e-47 |
Msa0524430 | Msa0608350 | 0.863180 | 2.991450e-64 | -8.615850e-47 |
Msa0524430 | Msa0612520 | 0.855920 | 4.561527e-62 | -8.615850e-47 |
Msa0524430 | Msa0613580 | 0.805340 | 1.399244e-49 | -8.615850e-47 |
Msa0524430 | Msa0613630 | 0.850824 | 1.322219e-60 | -8.615850e-47 |
Msa0524430 | Msa0614550 | 0.833101 | 6.469858e-56 | -8.615850e-47 |
Msa0524430 | Msa0615630 | 0.819534 | 1.104288e-52 | -8.615850e-47 |
Msa0524430 | Msa0620500 | 0.858262 | 9.297060e-63 | -8.615850e-47 |
Msa0524430 | Msa0622920 | 0.805170 | 1.519177e-49 | -8.615850e-47 |
Msa0524430 | Msa0625620 | 0.832409 | 9.608177e-56 | -8.615850e-47 |
Msa0524430 | Msa0630660 | 0.806304 | 8.777401e-50 | -8.615850e-47 |
Msa0524430 | Msa0639190 | 0.850566 | 1.562899e-60 | -8.615850e-47 |
Msa0524430 | Msa0640800 | 0.816378 | 5.703824e-52 | -8.615850e-47 |
Msa0524430 | Msa0645340 | 0.844679 | 6.510002e-59 | -8.615850e-47 |
Msa0524430 | Msa0647050 | 0.847695 | 9.824389e-60 | -8.615850e-47 |
Msa0524430 | Msa0647440 | 0.864176 | 1.467779e-64 | -8.615850e-47 |
Msa0524430 | Msa0648040 | 0.852669 | 3.965461e-61 | -8.615850e-47 |
Msa0524430 | Msa0648760 | 0.866416 | 2.897538e-65 | -8.615850e-47 |
Msa0524430 | Msa0653160 | 0.853011 | 3.167089e-61 | -8.615850e-47 |
Msa0524430 | Msa0654740 | 0.835162 | 1.969928e-56 | -8.615850e-47 |
Msa0524430 | Msa0657210 | 0.817826 | 2.695253e-52 | -8.615850e-47 |
Msa0524430 | Msa0663000 | 0.800411 | 1.459337e-48 | -8.615850e-47 |
Msa0524430 | Msa0663290 | 0.800343 | 1.506795e-48 | -8.615850e-47 |
Msa0524430 | Msa0664070 | 0.806732 | 7.132321e-50 | -8.615850e-47 |
Msa0524430 | Msa0668900 | 0.826832 | 2.185133e-54 | -8.615850e-47 |
Msa0524430 | Msa0684750 | 0.811207 | 7.858858e-51 | -8.615850e-47 |
Msa0524430 | Msa0687090 | 0.894226 | 3.009441e-75 | -8.615850e-47 |
Msa0524430 | Msa0688380 | 0.859780 | 3.263051e-63 | -8.615850e-47 |
Msa0524430 | Msa0688620 | 0.832125 | 1.129970e-55 | -8.615850e-47 |
Msa0524430 | Msa0690320 | 0.871209 | 8.135144e-67 | -8.615850e-47 |
Msa0524430 | Msa0690740 | 0.860538 | 1.926965e-63 | -8.615850e-47 |
Msa0524430 | Msa0691270 | 0.872154 | 3.954851e-67 | -8.615850e-47 |
Msa0524430 | Msa0695560 | 0.855677 | 5.371893e-62 | -8.615850e-47 |
Msa0524430 | Msa0697830 | 0.807777 | 4.283501e-50 | -8.615850e-47 |
Msa0524430 | Msa0698730 | 0.831392 | 1.713069e-55 | -8.615850e-47 |
Msa0524430 | Msa0701250 | 0.834247 | 3.347272e-56 | -8.615850e-47 |
Msa0524430 | Msa0707260 | 0.805005 | 1.644884e-49 | -8.615850e-47 |
Msa0524430 | Msa0713920 | 0.803045 | 4.203850e-49 | -8.615850e-47 |
Msa0524430 | Msa0714520 | 0.856095 | 4.054307e-62 | -8.615850e-47 |
Msa0524430 | Msa0717900 | 0.837575 | 4.793700e-57 | -8.615850e-47 |
Msa0524430 | Msa0718040 | 0.809939 | 1.476714e-50 | -8.615850e-47 |
Msa0524430 | Msa0720280 | 0.856893 | 2.364198e-62 | -8.615850e-47 |
Msa0524430 | Msa0722220 | 0.801213 | 1.001075e-48 | -8.615850e-47 |
Msa0524430 | Msa0736890 | 0.806265 | 8.945668e-50 | -8.615850e-47 |
Msa0524430 | Msa0737130 | 0.810607 | 1.059826e-50 | -8.615850e-47 |
Msa0524430 | Msa0745720 | 0.820450 | 6.815944e-53 | -8.615850e-47 |
Msa0524430 | Msa0747740 | 0.814874 | 1.233274e-51 | -8.615850e-47 |
Msa0524430 | Msa0749190 | 0.839552 | 1.480256e-57 | -8.615850e-47 |
Msa0524430 | Msa0750520 | 0.837987 | 3.757691e-57 | -8.615850e-47 |
Msa0524430 | Msa0751200 | 0.820604 | 6.282912e-53 | -8.615850e-47 |
Msa0524430 | Msa0751250 | 0.838443 | 2.867243e-57 | -8.615850e-47 |
Msa0524430 | Msa0756330 | 0.845616 | 3.635174e-59 | -8.615850e-47 |
Msa0524430 | Msa0763550 | 0.816617 | 5.043365e-52 | -8.615850e-47 |
Msa0524430 | Msa0803140 | 0.853640 | 2.090933e-61 | -8.615850e-47 |
Msa0524430 | Msa0816080 | 0.846944 | 1.579555e-59 | -8.615850e-47 |
Msa0524430 | Msa0816230 | 0.807004 | 6.245725e-50 | -8.615850e-47 |
Msa0524430 | Msa0817360 | 0.819462 | 1.146903e-52 | -8.615850e-47 |
Msa0524430 | Msa0831620 | 0.830704 | 2.528486e-55 | -8.615850e-47 |
Msa0524430 | Msa0835350 | 0.811529 | 6.690163e-51 | -8.615850e-47 |
Msa0524430 | Msa0837680 | 0.813542 | 2.428339e-51 | -8.615850e-47 |
Msa0524430 | Msa0841500 | 0.858070 | 1.059882e-62 | -8.615850e-47 |
Msa0524430 | Msa0857890 | 0.802048 | 6.750505e-49 | -8.615850e-47 |
Msa0524430 | Msa0861440 | 0.815549 | 8.733766e-52 | -8.615850e-47 |
Msa0524430 | Msa0867110 | 0.816418 | 5.586257e-52 | -8.615850e-47 |
Msa0524430 | Msa0879920 | 0.829235 | 5.767194e-55 | -8.615850e-47 |
Msa0524430 | Msa0897790 | 0.839772 | 1.297459e-57 | -8.615850e-47 |
Msa0524430 | Msa0900090 | 0.841244 | 5.343244e-58 | -8.615850e-47 |
Msa0524430 | Msa0909760 | 0.835079 | 2.067693e-56 | -8.615850e-47 |
Msa0524430 | Msa0924430 | 0.839439 | 1.583687e-57 | -8.615850e-47 |
Msa0524430 | Msa0965470 | 0.829890 | 3.996435e-55 | -8.615850e-47 |
Msa0524430 | Msa0966710 | 0.800071 | 1.711734e-48 | -8.615850e-47 |
Msa0524430 | Msa0989510 | 0.818150 | 2.277250e-52 | -8.615850e-47 |
Msa0524430 | Msa0999950 | 0.823667 | 1.224236e-53 | -8.615850e-47 |
Msa0524430 | Msa1008670 | 0.845493 | 3.925398e-59 | -8.615850e-47 |
Msa0524430 | Msa1008680 | 0.813516 | 2.460484e-51 | -8.615850e-47 |
Msa0524430 | Msa1033920 | 0.838886 | 2.203412e-57 | -8.615850e-47 |
Msa0524430 | Msa1059020 | 0.823319 | 1.476466e-53 | -8.615850e-47 |
Msa0524430 | Msa1060900 | 0.844183 | 8.849879e-59 | -8.615850e-47 |
Msa0524430 | Msa1071410 | 0.835061 | 2.089200e-56 | -8.615850e-47 |
Msa0524430 | Msa1076020 | 0.829782 | 4.244501e-55 | -8.615850e-47 |
Msa0524430 | Msa1078030 | 0.824634 | 7.256973e-54 | -8.615850e-47 |
Msa0524430 | Msa1078860 | 0.808589 | 2.875028e-50 | -8.615850e-47 |
Msa0524430 | Msa1078880 | 0.814706 | 1.343786e-51 | -8.615850e-47 |
Msa0524430 | Msa1078970 | 0.803350 | 3.635431e-49 | -8.615850e-47 |
Msa0524430 | Msa1078990 | 0.806313 | 8.739925e-50 | -8.615850e-47 |
Msa0524430 | Msa1079640 | 0.817595 | 3.040094e-52 | -8.615850e-47 |
Msa0524430 | Msa1082380 | 0.840563 | 8.062604e-58 | -8.615850e-47 |
Msa0524430 | Msa1104220 | 0.844357 | 7.949508e-59 | -8.615850e-47 |
Msa0524430 | Msa1106220 | 0.845842 | 3.155845e-59 | -8.615850e-47 |
Msa0524430 | Msa1124470 | 0.810081 | 1.376211e-50 | -8.615850e-47 |
Msa0524430 | Msa1127280 | 0.814449 | 1.532004e-51 | -8.615850e-47 |
Msa0524430 | Msa1127470 | 0.803001 | 4.294052e-49 | -8.615850e-47 |
Msa0524430 | Msa1139050 | 0.821526 | 3.852309e-53 | -8.615850e-47 |
Msa0524430 | Msa1144990 | 0.837931 | 3.883562e-57 | -8.615850e-47 |
Msa0524430 | Msa1148630 | 0.820476 | 6.721322e-53 | -8.615850e-47 |
Msa0524430 | Msa1149450 | 0.818997 | 1.463212e-52 | -8.615850e-47 |
Msa0524430 | Msa1162880 | 0.848866 | 4.664698e-60 | -8.615850e-47 |
Msa0524430 | Msa1163180 | 0.821095 | 4.845177e-53 | -8.615850e-47 |
Msa0524430 | Msa1165480 | 0.815949 | 7.113210e-52 | -8.615850e-47 |
Msa0524430 | Msa1169170 | 0.822775 | 1.977531e-53 | -8.615850e-47 |
Msa0524430 | Msa1169190 | 0.816970 | 4.201266e-52 | -8.615850e-47 |
Msa0524430 | Msa1169690 | 0.806770 | 7.000692e-50 | -8.615850e-47 |
Msa0524430 | Msa1188340 | 0.852396 | 4.743976e-61 | -8.615850e-47 |
Msa0524430 | Msa1190390 | 0.803367 | 3.605412e-49 | -8.615850e-47 |
Msa0524430 | Msa1191000 | 0.853398 | 2.453733e-61 | -8.615850e-47 |
Msa0524430 | Msa1201780 | 0.808050 | 3.746173e-50 | -8.615850e-47 |
Msa0524430 | Msa1206040 | 0.829003 | 6.564951e-55 | -8.615850e-47 |
Msa0524430 | Msa1212700 | 0.837736 | 4.358066e-57 | -8.615850e-47 |
Msa0524430 | Msa1212920 | 0.851689 | 7.536996e-61 | -8.615850e-47 |
Msa0524430 | Msa1213830 | 0.851392 | 9.145155e-61 | -8.615850e-47 |
Msa0524430 | Msa1214350 | 0.853096 | 2.994957e-61 | -8.615850e-47 |
Msa0524430 | Msa1215980 | 0.858723 | 6.774093e-63 | -8.615850e-47 |
Msa0524430 | Msa1217230 | 0.814805 | 1.277624e-51 | -8.615850e-47 |
Msa0524430 | Msa1223390 | 0.823404 | 1.410787e-53 | -8.615850e-47 |
Msa0524430 | Msa1240940 | 0.859847 | 3.115109e-63 | -8.615850e-47 |
Msa0524430 | Msa1244690 | 0.800482 | 1.411559e-48 | -8.615850e-47 |
Msa0524430 | Msa1254420 | 0.857780 | 1.292626e-62 | -8.615850e-47 |
Msa0524430 | Msa1254540 | 0.855816 | 4.892903e-62 | -8.615850e-47 |
Msa0524430 | Msa1261050 | 0.826352 | 2.843555e-54 | -8.615850e-47 |
Msa0524430 | Msa1262570 | 0.826247 | 3.012295e-54 | -8.615850e-47 |
Msa0524430 | Msa1263740 | 0.871386 | 7.111135e-67 | -8.615850e-47 |
Msa0524430 | Msa1263780 | 0.854980 | 8.571486e-62 | -8.615850e-47 |
Msa0524430 | Msa1267930 | 0.833409 | 5.421082e-56 | -8.615850e-47 |
Msa0524430 | Msa1282300 | 0.854063 | 1.579397e-61 | -8.615850e-47 |
Msa0524430 | Msa1294460 | 0.852207 | 5.372365e-61 | -8.615850e-47 |
Msa0524430 | Msa1294790 | 0.882308 | 1.161608e-70 | -8.615850e-47 |
Msa0524430 | Msa1296330 | 0.820595 | 6.311529e-53 | -8.615850e-47 |
Msa0524430 | Msa1297070 | 0.839251 | 1.771882e-57 | -8.615850e-47 |
Msa0524430 | Msa1299980 | 0.845210 | 4.681010e-59 | -8.615850e-47 |
Msa0524430 | Msa1300460 | 0.837363 | 5.433340e-57 | -8.615850e-47 |
Msa0524430 | Msa1301820 | 0.820767 | 5.764685e-53 | -8.615850e-47 |
Msa0524430 | Msa1305780 | 0.830556 | 2.747337e-55 | -8.615850e-47 |
Msa0524430 | Msa1305920 | 0.857702 | 1.362951e-62 | -8.615850e-47 |
Msa0524430 | Msa1306570 | 0.812456 | 4.201081e-51 | -8.615850e-47 |
Msa0524430 | Msa1308850 | 0.801132 | 1.040188e-48 | -8.615850e-47 |
Msa0524430 | Msa1321530 | 0.880799 | 4.075661e-70 | -8.615850e-47 |
Msa0524430 | Msa1328870 | 0.824302 | 8.686965e-54 | -8.615850e-47 |
Msa0524430 | Msa1331650 | 0.865422 | 5.974906e-65 | -8.615850e-47 |
Msa0524430 | Msa1332950 | 0.834390 | 3.081466e-56 | -8.615850e-47 |
Msa0524430 | Msa1339170 | 0.857046 | 2.130566e-62 | -8.615850e-47 |
Msa0524430 | Msa1339230 | 0.812504 | 4.100103e-51 | -8.615850e-47 |
Msa0524430 | Msa1342810 | 0.898985 | 3.098684e-77 | -8.615850e-47 |
Msa0524430 | Msa1361930 | 0.840276 | 9.586173e-58 | -8.615850e-47 |
Msa0524430 | Msa1362130 | 0.806460 | 8.137087e-50 | -8.615850e-47 |
Msa0524430 | Msa1362610 | 0.819630 | 1.050021e-52 | -8.615850e-47 |
Msa0524430 | Msa1364410 | 0.824132 | 9.524666e-54 | -8.615850e-47 |
Msa0524430 | Msa1364680 | 0.807798 | 4.239296e-50 | -8.615850e-47 |
Msa0524430 | Msa1367520 | 0.980847 | 3.576587e-151 | -8.615850e-47 |
Msa0524430 | Msa1375350 | 0.825466 | 4.616538e-54 | -8.615850e-47 |
Msa0524430 | Msa1381470 | 0.810637 | 1.043828e-50 | -8.615850e-47 |
Msa0524430 | Msa1381800 | 0.831461 | 1.647552e-55 | -8.615850e-47 |
Msa0524430 | Msa1383310 | 0.817958 | 2.517273e-52 | -8.615850e-47 |
Msa0524430 | Msa1387500 | 0.828728 | 7.652064e-55 | -8.615850e-47 |
Msa0524430 | Msa1389820 | 0.830172 | 3.410152e-55 | -8.615850e-47 |
Msa0524430 | Msa1390210 | 0.802475 | 5.511470e-49 | -8.615850e-47 |
Msa0524430 | Msa1393560 | 0.815048 | 1.128698e-51 | -8.615850e-47 |
Msa0524430 | Msa1400710 | 0.823807 | 1.135437e-53 | -8.615850e-47 |
Msa0524430 | Msa1406720 | 0.888733 | 4.542002e-73 | -8.615850e-47 |
Msa0524430 | Msa1410190 | 0.830230 | 3.301297e-55 | -8.615850e-47 |
Msa0524430 | Msa1424370 | 0.836810 | 7.524716e-57 | -8.615850e-47 |
Msa0524430 | Msa1424590 | 0.988868 | 9.782265e-176 | -8.615850e-47 |
Msa0524430 | Msa1426110 | 0.801718 | 7.889500e-49 | -8.615850e-47 |
Msa0524430 | Msa1426320 | 0.826359 | 2.833285e-54 | -8.615850e-47 |
Msa0524430 | Msa1432520 | 0.817969 | 2.502403e-52 | -8.615850e-47 |
Msa0524430 | Msa1434640 | 0.837454 | 5.149809e-57 | -8.615850e-47 |
Msa0524430 | Msa1442260 | 0.844187 | 8.832244e-59 | -8.615850e-47 |
Msa0524430 | Msa1450190 | 0.809482 | 1.851866e-50 | -8.615850e-47 |
Msa0524430 | Msa1457840 | 0.821916 | 3.129659e-53 | -8.615850e-47 |
Msa0524430 | Msa1466890 | 0.800310 | 1.530297e-48 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0524430 | MtrunA17_Chr3g0145671 | 97.163 | 282 | 5 | 1 | 1 | 282 | 1 | 279 | 0.0 | 548 |
Msa0524430 | MtrunA17_Chr7g0264111 | 79.443 | 287 | 48 | 3 | 1 | 279 | 1 | 284 | 2.63e-162 | 452 |
Msa0524430 | MtrunA17_Chr2g0326621 | 74.126 | 286 | 67 | 1 | 1 | 279 | 1 | 286 | 2.21e-156 | 437 |
Msa0524430 | MtrunA17_Chr4g0029071 | 75.532 | 282 | 60 | 2 | 4 | 279 | 6 | 284 | 7.40e-156 | 436 |
Msa0524430 | MtrunA17_Chr1g0199731 | 77.113 | 284 | 56 | 2 | 4 | 281 | 6 | 286 | 4.25e-155 | 434 |
Msa0524430 | MtrunA17_Chr8g0386961 | 69.145 | 269 | 82 | 1 | 4 | 271 | 16 | 284 | 8.18e-134 | 380 |
Msa0524430 | MtrunA17_Chr3g0113211 | 71.648 | 261 | 73 | 1 | 13 | 272 | 28 | 288 | 1.91e-133 | 379 |
Msa0524430 | MtrunA17_Chr4g0006001 | 69.922 | 256 | 77 | 0 | 17 | 272 | 33 | 288 | 2.45e-133 | 379 |
Msa0524430 | MtrunA17_Chr5g0436701 | 71.595 | 257 | 72 | 1 | 17 | 272 | 32 | 288 | 2.99e-131 | 374 |
Msa0524430 | MtrunA17_Chr5g0397391 | 67.778 | 270 | 86 | 1 | 4 | 272 | 16 | 285 | 6.52e-130 | 370 |
Msa0524430 | MtrunA17_Chr2g0331261 | 40.175 | 229 | 123 | 5 | 40 | 265 | 20 | 237 | 1.45e-40 | 140 |
Msa0524430 | MtrunA17_Chr8g0340161 | 41.364 | 220 | 109 | 6 | 40 | 253 | 19 | 224 | 2.13e-37 | 132 |
Msa0524430 | MtrunA17_Chr4g0030861 | 38.627 | 233 | 128 | 6 | 45 | 273 | 26 | 247 | 1.61e-36 | 130 |
Msa0524430 | MtrunA17_Chr1g0188771 | 38.961 | 231 | 123 | 7 | 40 | 265 | 21 | 238 | 4.27e-35 | 127 |
Msa0524430 | MtrunA17_Chr1g0212671 | 38.095 | 231 | 129 | 5 | 40 | 267 | 21 | 240 | 4.58e-34 | 124 |
Msa0524430 | MtrunA17_Chr5g0399341 | 40.092 | 217 | 115 | 5 | 40 | 253 | 19 | 223 | 2.40e-33 | 122 |
Msa0524430 | MtrunA17_Chr7g0222791 | 36.681 | 229 | 131 | 5 | 40 | 265 | 21 | 238 | 1.77e-32 | 120 |
Msa0524430 | MtrunA17_Chr6g0478191 | 37.555 | 229 | 129 | 5 | 40 | 265 | 21 | 238 | 2.78e-32 | 119 |
Msa0524430 | MtrunA17_Chr1g0146161 | 35.622 | 233 | 127 | 8 | 40 | 266 | 19 | 234 | 1.52e-31 | 117 |
Msa0524430 | MtrunA17_Chr1g0146171 | 37.021 | 235 | 121 | 10 | 40 | 266 | 19 | 234 | 3.45e-31 | 116 |
Msa0524430 | MtrunA17_Chr7g0264961 | 35.945 | 217 | 124 | 5 | 40 | 253 | 21 | 225 | 1.13e-30 | 115 |
Msa0524430 | MtrunA17_Chr8g0379901 | 31.222 | 221 | 137 | 5 | 38 | 258 | 37 | 242 | 3.18e-23 | 95.9 |
Msa0524430 | MtrunA17_Chr2g0333771 | 32.127 | 221 | 134 | 6 | 44 | 264 | 84 | 288 | 5.99e-23 | 95.9 |
Msa0524430 | MtrunA17_Chr2g0284631 | 30.222 | 225 | 142 | 5 | 40 | 264 | 91 | 300 | 8.15e-22 | 93.2 |
Msa0524430 | MtrunA17_Chr4g0001221 | 29.391 | 279 | 160 | 10 | 7 | 277 | 55 | 304 | 1.82e-21 | 91.7 |
Msa0524430 | MtrunA17_Chr3g0079421 | 28.400 | 250 | 160 | 7 | 34 | 282 | 20 | 251 | 2.98e-21 | 90.5 |
Msa0524430 | MtrunA17_Chr5g0435051 | 29.098 | 244 | 155 | 6 | 37 | 278 | 37 | 264 | 4.94e-21 | 90.1 |
Msa0524430 | MtrunA17_Chr5g0426131 | 28.509 | 228 | 148 | 5 | 37 | 264 | 35 | 247 | 3.27e-20 | 87.4 |
Msa0524430 | MtrunA17_Chr8g0379911 | 30.263 | 228 | 144 | 5 | 37 | 264 | 35 | 247 | 7.66e-20 | 86.7 |
Msa0524430 | MtrunA17_Chr4g0038591 | 28.448 | 232 | 143 | 8 | 39 | 255 | 50 | 273 | 2.87e-19 | 86.3 |
Msa0524430 | MtrunA17_Chr4g0038611 | 32.418 | 182 | 107 | 6 | 87 | 255 | 32 | 210 | 1.51e-18 | 83.2 |
Msa0524430 | MtrunA17_Chr2g0284591 | 29.515 | 227 | 145 | 5 | 38 | 264 | 34 | 245 | 2.97e-18 | 82.4 |
Msa0524430 | MtrunA17_Chr4g0020781 | 34.444 | 180 | 101 | 4 | 89 | 265 | 30 | 195 | 3.56e-18 | 80.9 |
Msa0524430 | MtrunA17_Chr2g0284611 | 29.075 | 227 | 146 | 5 | 38 | 264 | 36 | 247 | 1.03e-17 | 80.9 |
Msa0524430 | MtrunA17_Chr7g0217331 | 29.596 | 223 | 137 | 7 | 38 | 258 | 35 | 239 | 3.66e-17 | 79.3 |
Msa0524430 | MtrunA17_Chr2g0284581 | 28.384 | 229 | 141 | 6 | 40 | 264 | 38 | 247 | 1.27e-16 | 77.8 |
Msa0524430 | MtrunA17_Chr1g0201331 | 28.947 | 228 | 146 | 6 | 37 | 264 | 71 | 282 | 2.07e-16 | 77.8 |
Msa0524430 | MtrunA17_Chr4g0044201 | 29.148 | 223 | 131 | 7 | 40 | 261 | 35 | 231 | 2.23e-16 | 77.0 |
Msa0524430 | MtrunA17_Chr2g0284601 | 31.217 | 189 | 116 | 5 | 77 | 264 | 24 | 199 | 8.46e-16 | 74.7 |
Msa0524430 | MtrunA17_Chr1g0184541 | 26.271 | 236 | 142 | 7 | 37 | 264 | 59 | 270 | 8.86e-15 | 72.8 |
Msa0524430 | MtrunA17_Chr4g0001111 | 30.220 | 182 | 105 | 7 | 7 | 187 | 55 | 215 | 1.90e-11 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0524430 | AT4G35100.1 | 89.716 | 282 | 27 | 1 | 1 | 282 | 1 | 280 | 0.0 | 514 |
Msa0524430 | AT4G35100.2 | 89.716 | 282 | 27 | 1 | 1 | 282 | 1 | 280 | 0.0 | 514 |
Msa0524430 | AT2G16850.1 | 90.780 | 282 | 22 | 1 | 1 | 282 | 1 | 278 | 0.0 | 513 |
Msa0524430 | AT5G60660.1 | 75.000 | 284 | 64 | 2 | 1 | 278 | 1 | 283 | 2.96e-153 | 429 |
Msa0524430 | AT3G54820.1 | 74.825 | 286 | 64 | 2 | 1 | 280 | 1 | 284 | 3.29e-152 | 427 |
Msa0524430 | AT3G53420.1 | 77.985 | 268 | 53 | 1 | 17 | 278 | 16 | 283 | 6.57e-152 | 426 |
Msa0524430 | AT3G53420.2 | 77.985 | 268 | 53 | 1 | 17 | 278 | 16 | 283 | 6.57e-152 | 426 |
Msa0524430 | AT2G37170.2 | 73.611 | 288 | 66 | 3 | 1 | 278 | 37 | 324 | 1.04e-151 | 427 |
Msa0524430 | AT2G37170.1 | 74.564 | 287 | 58 | 4 | 1 | 278 | 1 | 281 | 8.96e-151 | 423 |
Msa0524430 | AT2G39010.1 | 74.126 | 286 | 64 | 3 | 1 | 279 | 1 | 283 | 1.22e-150 | 423 |
Msa0524430 | AT2G37180.1 | 74.913 | 287 | 57 | 4 | 1 | 278 | 1 | 281 | 5.76e-150 | 421 |
Msa0524430 | AT4G00430.1 | 74.609 | 256 | 65 | 0 | 17 | 272 | 30 | 285 | 3.07e-139 | 394 |
Msa0524430 | AT2G45960.1 | 72.656 | 256 | 70 | 0 | 17 | 272 | 29 | 284 | 4.13e-135 | 384 |
Msa0524430 | AT1G01620.1 | 74.219 | 256 | 66 | 0 | 17 | 272 | 29 | 284 | 1.30e-131 | 375 |
Msa0524430 | AT4G23400.1 | 70.632 | 269 | 79 | 0 | 4 | 272 | 17 | 285 | 7.85e-129 | 367 |
Msa0524430 | AT3G61430.2 | 71.875 | 256 | 72 | 0 | 17 | 272 | 29 | 284 | 1.16e-126 | 362 |
Msa0524430 | AT3G61430.1 | 71.875 | 256 | 72 | 0 | 17 | 272 | 29 | 284 | 1.16e-126 | 362 |
Msa0524430 | AT2G45960.2 | 75.330 | 227 | 56 | 0 | 17 | 243 | 29 | 255 | 3.93e-123 | 353 |
Msa0524430 | AT2G45960.3 | 75.330 | 227 | 56 | 0 | 17 | 243 | 29 | 255 | 1.14e-121 | 350 |
Msa0524430 | AT1G01620.2 | 75.472 | 212 | 52 | 0 | 61 | 272 | 1 | 212 | 2.27e-114 | 328 |
Msa0524430 | AT2G39010.2 | 71.569 | 204 | 48 | 3 | 1 | 197 | 1 | 201 | 3.92e-98 | 287 |
Msa0524430 | AT4G00430.2 | 75.135 | 185 | 46 | 0 | 17 | 201 | 30 | 214 | 2.56e-96 | 283 |
Msa0524430 | AT3G16240.1 | 42.857 | 217 | 110 | 5 | 40 | 253 | 19 | 224 | 2.46e-38 | 135 |
Msa0524430 | AT4G01470.1 | 37.555 | 229 | 129 | 5 | 40 | 265 | 21 | 238 | 5.49e-36 | 129 |
Msa0524430 | AT5G47450.1 | 41.228 | 228 | 119 | 7 | 37 | 260 | 16 | 232 | 6.06e-36 | 129 |
Msa0524430 | AT3G26520.1 | 37.391 | 230 | 128 | 6 | 40 | 265 | 22 | 239 | 2.75e-34 | 125 |
Msa0524430 | AT1G73190.1 | 36.325 | 234 | 130 | 5 | 40 | 265 | 24 | 246 | 5.27e-33 | 122 |
Msa0524430 | AT1G17810.1 | 37.607 | 234 | 127 | 5 | 40 | 265 | 24 | 246 | 1.69e-32 | 120 |
Msa0524430 | AT4G17340.1 | 38.462 | 247 | 129 | 8 | 40 | 282 | 19 | 246 | 4.44e-32 | 119 |
Msa0524430 | AT2G36830.1 | 35.931 | 231 | 133 | 6 | 40 | 266 | 21 | 240 | 1.53e-31 | 117 |
Msa0524430 | AT2G25810.1 | 37.281 | 228 | 127 | 7 | 40 | 265 | 19 | 232 | 3.50e-30 | 114 |
Msa0524430 | AT3G47440.1 | 31.897 | 232 | 137 | 8 | 40 | 265 | 23 | 239 | 2.67e-24 | 99.0 |
Msa0524430 | AT4G19030.1 | 27.586 | 261 | 170 | 5 | 1 | 258 | 21 | 265 | 2.04e-19 | 86.3 |
Msa0524430 | AT1G80760.1 | 29.098 | 244 | 154 | 6 | 37 | 277 | 77 | 304 | 4.67e-19 | 85.5 |
Msa0524430 | AT1G31885.1 | 27.876 | 226 | 147 | 5 | 37 | 258 | 40 | 253 | 2.45e-18 | 84.0 |
Msa0524430 | AT4G10380.1 | 29.778 | 225 | 142 | 5 | 37 | 261 | 75 | 283 | 1.26e-17 | 81.6 |
Msa0524430 | AT5G37820.1 | 29.515 | 227 | 141 | 6 | 40 | 264 | 43 | 252 | 1.49e-17 | 80.9 |
Msa0524430 | AT5G37820.2 | 29.515 | 227 | 141 | 6 | 40 | 264 | 79 | 288 | 2.13e-17 | 81.3 |
Msa0524430 | AT4G18910.1 | 27.232 | 224 | 149 | 4 | 38 | 258 | 50 | 262 | 5.82e-16 | 76.6 |
Msa0524430 | AT5G37810.1 | 26.692 | 266 | 174 | 7 | 2 | 264 | 5 | 252 | 1.35e-15 | 75.5 |
Msa0524430 | AT2G34390.1 | 28.571 | 231 | 148 | 7 | 38 | 264 | 46 | 263 | 1.67e-14 | 72.4 |
Msa0524430 | AT1G31885.2 | 28.947 | 190 | 122 | 4 | 73 | 258 | 19 | 199 | 2.63e-14 | 71.6 |
Msa0524430 | AT2G34390.2 | 28.448 | 232 | 149 | 7 | 37 | 264 | 3 | 221 | 7.83e-14 | 70.1 |
Msa0524430 | AT3G06100.1 | 30.000 | 230 | 136 | 9 | 40 | 264 | 46 | 255 | 2.66e-12 | 65.9 |
Msa0524430 | AT3G06100.2 | 29.515 | 227 | 135 | 8 | 43 | 264 | 1 | 207 | 2.95e-11 | 62.4 |
Find 107 sgRNAs with CRISPR-Local
Find 236 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGTGACGGTGTTGGCCTTCT+AGG | 0.206372 | 3_4:+77891696 | Msa0524430:CDS |
GAGTCCCGTGCGCTTCTCTT+AGG | 0.269420 | 3_4:-77892044 | None:intergenic |
TCAAGGAGGGGTGCTGGTGG+TGG | 0.295321 | 3_4:-77891552 | None:intergenic |
TATGCATGCAGTGGATCTTC+TGG | 0.301366 | 3_4:+77892307 | Msa0524430:intron |
TCTTCAACAATGCCAAAGTT+TGG | 0.312604 | 3_4:+77892186 | Msa0524430:CDS |
GGACTCACATGTCCCTGTTT+TGG | 0.328630 | 3_4:+77892061 | Msa0524430:CDS |
AATTAATTAATTAATTTAGT+TGG | 0.338910 | 3_4:-77892430 | None:intergenic |
CTAGGCATAGCATGGTCCTT+TGG | 0.364281 | 3_4:+77891714 | Msa0524430:CDS |
ATGGGCAAAGGAGCCAAAAC+AGG | 0.383343 | 3_4:-77892074 | None:intergenic |
CCGCCGCCGAGGTGGTTGTA+AGG | 0.390135 | 3_4:-77891921 | None:intergenic |
CTTCAACAATGCCAAAGTTT+GGG | 0.399277 | 3_4:+77892187 | Msa0524430:CDS |
GGCAGAGCCTTTGCTGTAAC+CGG | 0.402530 | 3_4:-77891961 | None:intergenic |
CCGCTCTAAGAATGTATTGA+TGG | 0.413506 | 3_4:-77892368 | None:intergenic |
CAAGGAGGGGTGCTGGTGGT+GGG | 0.413906 | 3_4:-77891551 | None:intergenic |
GTCCTTGTCTACTGCACCGC+TGG | 0.418520 | 3_4:+77891750 | Msa0524430:CDS |
GCCCTCGGTGCTGAAATTAT+CGG | 0.421803 | 3_4:+77891981 | Msa0524430:CDS |
AGGACCATGCTATGCCTAGA+AGG | 0.427239 | 3_4:-77891710 | None:intergenic |
GTTGGTGGGGTTGCTTCTAA+AGG | 0.429287 | 3_4:-77892412 | None:intergenic |
AATTAATTAATTTAGTTGGT+GGG | 0.430160 | 3_4:-77892426 | None:intergenic |
TACTGCACCGCTGGTATCTC+CGG | 0.434993 | 3_4:+77891759 | Msa0524430:CDS |
AGTCCCGTGCGCTTCTCTTA+GGG | 0.437868 | 3_4:-77892043 | None:intergenic |
GCTCCTAGCAGGGTTGATTC+CGG | 0.438753 | 3_4:-77892147 | None:intergenic |
CTTCTGGGTTGGACCGTTGG+TGG | 0.441035 | 3_4:+77892323 | Msa0524430:CDS |
TGGACCGTTGGTGGGAGCGT+TGG | 0.441974 | 3_4:+77892332 | Msa0524430:CDS |
TTGATTCCGGTACCGGTGAT+TGG | 0.445472 | 3_4:-77892134 | None:intergenic |
ATCAACCCTGCTAGGAGCTT+CGG | 0.445533 | 3_4:+77892152 | Msa0524430:CDS |
TACATGGTAGCACAGTGTTT+AGG | 0.447822 | 3_4:+77891855 | Msa0524430:CDS |
GCGGCGGCTATCAAGGCGTT+GGG | 0.451615 | 3_4:+77892387 | Msa0524430:CDS |
TCTAAAGAAGTGAGTGAAGA+AGG | 0.451723 | 3_4:+77891492 | Msa0524430:CDS |
AGCGGCGGCTATCAAGGCGT+TGG | 0.453049 | 3_4:+77892386 | Msa0524430:CDS |
TCTTAGAGCGGCGGCTATCA+AGG | 0.465345 | 3_4:+77892380 | Msa0524430:CDS |
AGCAGGGTTGATTCCGGTAC+CGG | 0.467989 | 3_4:-77892141 | None:intergenic |
ATTAACCCTGCTGTCACATT+CGG | 0.470489 | 3_4:+77891789 | Msa0524430:CDS |
GATCTTCTGGGTTGGACCGT+TGG | 0.472135 | 3_4:+77892320 | Msa0524430:CDS |
TTCTGGGTTGGACCGTTGGT+GGG | 0.480051 | 3_4:+77892324 | Msa0524430:CDS |
ATTAATTAATTTAGTTGGTG+GGG | 0.483253 | 3_4:-77892425 | None:intergenic |
GCGAAGTCAAGGAGGGGTGC+TGG | 0.483574 | 3_4:-77891558 | None:intergenic |
TGCTATCTGTGGCGTTGGGT+TGG | 0.487734 | 3_4:+77891878 | Msa0524430:CDS |
GTCACTGTCGCCACCGTCAT+TGG | 0.492002 | 3_4:+77891651 | Msa0524430:CDS |
TAATTAATTAATTTAGTTGG+TGG | 0.492825 | 3_4:-77892427 | None:intergenic |
CTGTGGCGTTGGGTTGGTGA+AGG | 0.493175 | 3_4:+77891884 | Msa0524430:CDS |
GGCATAGCATGGTCCTTTGG+TGG | 0.497936 | 3_4:+77891717 | Msa0524430:CDS |
GCAGCACCGAAGCTCCTAGC+AGG | 0.500446 | 3_4:-77892158 | None:intergenic |
TACAGCAAAGGCTCTGCCCT+CGG | 0.501785 | 3_4:+77891966 | Msa0524430:CDS |
TTAGGTGCTATCTGTGGCGT+TGG | 0.502610 | 3_4:+77891873 | Msa0524430:CDS |
CGCCGCCGAGGTGGTTGTAA+GGG | 0.503836 | 3_4:-77891920 | None:intergenic |
TTAATTAATTAATTAACAGT+AGG | 0.506058 | 3_4:+77892443 | Msa0524430:three_prime_UTR |
ACACTTTACGAGCCAAGAAA+AGG | 0.506621 | 3_4:-77891812 | None:intergenic |
CGACAGTGACGTAGAGAAAG+AGG | 0.507110 | 3_4:-77891638 | None:intergenic |
ACTATACCAATCACCGGTAC+CGG | 0.509500 | 3_4:+77892128 | Msa0524430:CDS |
TACATGGTCATCCCAAACTT+TGG | 0.513712 | 3_4:-77892198 | None:intergenic |
CATAAGAGCGGTGTTATACA+TGG | 0.519758 | 3_4:+77891839 | Msa0524430:CDS |
AAAAGGCCGAATGTGACAGC+AGG | 0.520051 | 3_4:-77891795 | None:intergenic |
ATGCATGCAGTGGATCTTCT+GGG | 0.527197 | 3_4:+77892308 | Msa0524430:intron |
ATAAATAAATATGAAATGAA+AGG | 0.548453 | 3_4:-77892637 | None:intergenic |
CCTTACAACCACCTCGGCGG+CGG | 0.549715 | 3_4:+77891921 | Msa0524430:CDS |
GGTGCTAACTCTGTAGCTTC+CGG | 0.550093 | 3_4:+77891942 | Msa0524430:CDS |
GCTTAATCTCAGCGAAGTCA+AGG | 0.551663 | 3_4:-77891569 | None:intergenic |
TAGGTGCTATCTGTGGCGTT+GGG | 0.554325 | 3_4:+77891874 | Msa0524430:CDS |
TAGTCCTTACCGTGAGGATG+TGG | 0.555862 | 3_4:-77891522 | None:intergenic |
GTTGGTGGGAGCGTTGGCAG+CGG | 0.556763 | 3_4:+77892338 | Msa0524430:CDS |
TCCGATAATTTCAGCACCGA+GGG | 0.562447 | 3_4:-77891982 | None:intergenic |
AAGTCAAGGAGGGGTGCTGG+TGG | 0.564356 | 3_4:-77891555 | None:intergenic |
GTAGCTTCCGGTTACAGCAA+AGG | 0.567822 | 3_4:+77891954 | Msa0524430:CDS |
ACAGCAAAACCAATGGGCAA+AGG | 0.573216 | 3_4:-77892086 | None:intergenic |
AGCAGGGTTAATGTGGCCAC+CGG | 0.573223 | 3_4:-77891778 | None:intergenic |
TTGGCCTTCTAGGCATAGCA+TGG | 0.579145 | 3_4:+77891706 | Msa0524430:CDS |
CCTACCACATCCTCACGGTA+AGG | 0.579509 | 3_4:+77891518 | Msa0524430:CDS |
TGAAAGGTCAGAACAAGCAC+AGG | 0.583045 | 3_4:-77892621 | None:intergenic |
GCTGCCAACGCTCCCACCAA+CGG | 0.587110 | 3_4:-77892336 | None:intergenic |
CTAAAGAAGTGAGTGAAGAA+GGG | 0.592831 | 3_4:+77891493 | Msa0524430:CDS |
TACCAGCGGTGCAGTAGACA+AGG | 0.595575 | 3_4:-77891752 | None:intergenic |
GACAAAGATCATGCCACCAA+AGG | 0.596121 | 3_4:-77891730 | None:intergenic |
ACTTCGCTGAGATTAAGCTC+TGG | 0.596756 | 3_4:+77891574 | Msa0524430:CDS |
ATGTGACAGCAGGGTTAATG+TGG | 0.601114 | 3_4:-77891785 | None:intergenic |
CGGTGATTGGTATAGTTGCA+AGG | 0.601911 | 3_4:-77892121 | None:intergenic |
CAGAGTTAGCACCGCCGCCG+AGG | 0.603070 | 3_4:-77891932 | None:intergenic |
CAGCACCGAAGCTCCTAGCA+GGG | 0.610916 | 3_4:-77892157 | None:intergenic |
GTACCGGAATCAACCCTGCT+AGG | 0.610944 | 3_4:+77892144 | Msa0524430:CDS |
AATCTCAGCGAAGTCAAGGA+GGG | 0.616287 | 3_4:-77891565 | None:intergenic |
AGAAGGCCAACACCGTCACA+TGG | 0.616986 | 3_4:-77891693 | None:intergenic |
ATGCAGTGGATCTTCTGGGT+TGG | 0.623221 | 3_4:+77892312 | Msa0524430:intron |
TGCACCGCTGGTATCTCCGG+TGG | 0.624717 | 3_4:+77891762 | Msa0524430:CDS |
ATCTCAGCGAAGTCAAGGAG+GGG | 0.630738 | 3_4:-77891564 | None:intergenic |
CCTTACCGTGAGGATGTGGT+AGG | 0.631606 | 3_4:-77891518 | None:intergenic |
TGACCCTAAGAGAAGCGCAC+GGG | 0.634134 | 3_4:+77892040 | Msa0524430:CDS |
AAACAAACTGGTCCATGTGA+CGG | 0.634416 | 3_4:+77891681 | Msa0524430:CDS |
CTTGCAACTATACCAATCAC+CGG | 0.635837 | 3_4:+77892122 | Msa0524430:CDS |
TGGGCAAAGGAGCCAAAACA+GGG | 0.637363 | 3_4:-77892073 | None:intergenic |
AGTTAGCACCGCCGCCGAGG+TGG | 0.643604 | 3_4:-77891929 | None:intergenic |
CAGTGACGTAGAGAAAGAGG+AGG | 0.644359 | 3_4:-77891635 | None:intergenic |
CAGTGTTTAGGTGCTATCTG+TGG | 0.653498 | 3_4:+77891867 | Msa0524430:CDS |
AAAGGCCGAATGTGACAGCA+GGG | 0.654056 | 3_4:-77891794 | None:intergenic |
CACCCTTACAACCACCTCGG+CGG | 0.654519 | 3_4:+77891918 | Msa0524430:CDS |
TAATCTCAGCGAAGTCAAGG+AGG | 0.655437 | 3_4:-77891566 | None:intergenic |
ACTGGTCCATGTGACGGTGT+TGG | 0.657929 | 3_4:+77891687 | Msa0524430:CDS |
TTCCGATAATTTCAGCACCG+AGG | 0.665140 | 3_4:-77891983 | None:intergenic |
TCAATACATTCTTAGAGCGG+CGG | 0.665343 | 3_4:+77892371 | Msa0524430:CDS |
CTGACCCTAAGAGAAGCGCA+CGG | 0.668284 | 3_4:+77892039 | Msa0524430:CDS |
CCATCAATACATTCTTAGAG+CGG | 0.687313 | 3_4:+77892368 | Msa0524430:CDS |
TAAAGTGTCTCTCATAAGAG+CGG | 0.688091 | 3_4:+77891827 | Msa0524430:CDS |
AAACACCCTTACAACCACCT+CGG | 0.690282 | 3_4:+77891915 | Msa0524430:CDS |
AGTGACGTAGAGAAAGAGGA+GGG | 0.690484 | 3_4:-77891634 | None:intergenic |
GGGCACCTACCACATCCTCA+CGG | 0.692416 | 3_4:+77891513 | Msa0524430:CDS |
GACGTAGAGAAAGAGGAGGG+TGG | 0.694343 | 3_4:-77891631 | None:intergenic |
GTGGCCACCGGAGATACCAG+CGG | 0.716451 | 3_4:-77891766 | None:intergenic |
TCTACGTAGTCCTTACCGTG+AGG | 0.728979 | 3_4:-77891528 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTAATTAATTAATTAACAGT+AGG | + | chr3_4:77892443-77892462 | Msa0524430:three_prime_UTR | 10.0% |
!! | ATAAATAAATATGAAATGAA+AGG | - | chr3_4:77892640-77892659 | None:intergenic | 10.0% |
!! | TTAATTAATTAATTAACAGT+AGG | + | chr3_4:77892443-77892462 | Msa0524430:three_prime_UTR | 10.0% |
!! | ATAAATAAATATGAAATGAA+AGG | - | chr3_4:77892640-77892659 | None:intergenic | 10.0% |
!! | AAAGATATAATTAACATACA+TGG | - | chr3_4:77892217-77892236 | None:intergenic | 15.0% |
!! | AATTAATTAATTTAGTTGGT+GGG | - | chr3_4:77892429-77892448 | None:intergenic | 15.0% |
!! | TAATTAATTAATTTAGTTGG+TGG | - | chr3_4:77892430-77892449 | None:intergenic | 15.0% |
!! | AAAGATATAATTAACATACA+TGG | - | chr3_4:77892217-77892236 | None:intergenic | 15.0% |
!! | AATTAATTAATTTAGTTGGT+GGG | - | chr3_4:77892429-77892448 | None:intergenic | 15.0% |
!! | TAATTAATTAATTTAGTTGG+TGG | - | chr3_4:77892430-77892449 | None:intergenic | 15.0% |
!!! | ATTAATTAATTTAGTTGGTG+GGG | - | chr3_4:77892428-77892447 | None:intergenic | 20.0% |
!!! | ATTAATTAATTTAGTTGGTG+GGG | - | chr3_4:77892428-77892447 | None:intergenic | 20.0% |
! | ATAAAAACAGCAAAACCAAT+GGG | - | chr3_4:77892095-77892114 | None:intergenic | 25.0% |
! | ATAAAAACAGCAAAACCAAT+GGG | - | chr3_4:77892095-77892114 | None:intergenic | 25.0% |
!!! | TTGTTTTTTGTGACCAATGA+CGG | - | chr3_4:77891667-77891686 | None:intergenic | 30.0% |
ATTGGTCACAAAAAACAAAC+TGG | + | chr3_4:77891669-77891688 | Msa0524430:CDS | 30.0% | |
! | AATTATCGGAACTTTTGTGT+TGG | + | chr3_4:77891995-77892014 | Msa0524430:CDS | 30.0% |
CATAAAAACAGCAAAACCAA+TGG | - | chr3_4:77892096-77892115 | None:intergenic | 30.0% | |
!!! | CATTGGTTTTGCTGTTTTTA+TGG | + | chr3_4:77892094-77892113 | Msa0524430:CDS | 30.0% |
TATACTATATATGCATGCAG+TGG | + | chr3_4:77892298-77892317 | Msa0524430:intron | 30.0% | |
!!! | TTGTTTTTTGTGACCAATGA+CGG | - | chr3_4:77891667-77891686 | None:intergenic | 30.0% |
ATTGGTCACAAAAAACAAAC+TGG | + | chr3_4:77891669-77891688 | Msa0524430:CDS | 30.0% | |
! | AATTATCGGAACTTTTGTGT+TGG | + | chr3_4:77891995-77892014 | Msa0524430:CDS | 30.0% |
CATAAAAACAGCAAAACCAA+TGG | - | chr3_4:77892096-77892115 | None:intergenic | 30.0% | |
!!! | CATTGGTTTTGCTGTTTTTA+TGG | + | chr3_4:77892094-77892113 | Msa0524430:CDS | 30.0% |
TATACTATATATGCATGCAG+TGG | + | chr3_4:77892298-77892317 | Msa0524430:intron | 30.0% | |
TCTAAAGAAGTGAGTGAAGA+AGG | + | chr3_4:77891492-77891511 | Msa0524430:CDS | 35.0% | |
CTAAAGAAGTGAGTGAAGAA+GGG | + | chr3_4:77891493-77891512 | Msa0524430:CDS | 35.0% | |
! | TAAAGTGTCTCTCATAAGAG+CGG | + | chr3_4:77891827-77891846 | Msa0524430:CDS | 35.0% |
TCTTCAACAATGCCAAAGTT+TGG | + | chr3_4:77892186-77892205 | Msa0524430:CDS | 35.0% | |
CTTCAACAATGCCAAAGTTT+GGG | + | chr3_4:77892187-77892206 | Msa0524430:CDS | 35.0% | |
CCATCAATACATTCTTAGAG+CGG | + | chr3_4:77892368-77892387 | Msa0524430:CDS | 35.0% | |
TCTAAAGAAGTGAGTGAAGA+AGG | + | chr3_4:77891492-77891511 | Msa0524430:CDS | 35.0% | |
CTAAAGAAGTGAGTGAAGAA+GGG | + | chr3_4:77891493-77891512 | Msa0524430:CDS | 35.0% | |
! | TAAAGTGTCTCTCATAAGAG+CGG | + | chr3_4:77891827-77891846 | Msa0524430:CDS | 35.0% |
TCTTCAACAATGCCAAAGTT+TGG | + | chr3_4:77892186-77892205 | Msa0524430:CDS | 35.0% | |
CTTCAACAATGCCAAAGTTT+GGG | + | chr3_4:77892187-77892206 | Msa0524430:CDS | 35.0% | |
CCATCAATACATTCTTAGAG+CGG | + | chr3_4:77892368-77892387 | Msa0524430:CDS | 35.0% | |
!!! | TTTTTTGTGACCAATGACGG+TGG | - | chr3_4:77891664-77891683 | None:intergenic | 40.0% |
AAACAAACTGGTCCATGTGA+CGG | + | chr3_4:77891681-77891700 | Msa0524430:CDS | 40.0% | |
ATTAACCCTGCTGTCACATT+CGG | + | chr3_4:77891789-77891808 | Msa0524430:CDS | 40.0% | |
ACACTTTACGAGCCAAGAAA+AGG | - | chr3_4:77891815-77891834 | None:intergenic | 40.0% | |
!! | CATAAGAGCGGTGTTATACA+TGG | + | chr3_4:77891839-77891858 | Msa0524430:CDS | 40.0% |
TACATGGTAGCACAGTGTTT+AGG | + | chr3_4:77891855-77891874 | Msa0524430:CDS | 40.0% | |
CTTGCAACTATACCAATCAC+CGG | + | chr3_4:77892122-77892141 | Msa0524430:CDS | 40.0% | |
TACATGGTCATCCCAAACTT+TGG | - | chr3_4:77892201-77892220 | None:intergenic | 40.0% | |
!! | CCGCTCTAAGAATGTATTGA+TGG | - | chr3_4:77892371-77892390 | None:intergenic | 40.0% |
TCAATACATTCTTAGAGCGG+CGG | + | chr3_4:77892371-77892390 | Msa0524430:CDS | 40.0% | |
!!! | TTTTTTGTGACCAATGACGG+TGG | - | chr3_4:77891664-77891683 | None:intergenic | 40.0% |
AAACAAACTGGTCCATGTGA+CGG | + | chr3_4:77891681-77891700 | Msa0524430:CDS | 40.0% | |
ATTAACCCTGCTGTCACATT+CGG | + | chr3_4:77891789-77891808 | Msa0524430:CDS | 40.0% | |
ACACTTTACGAGCCAAGAAA+AGG | - | chr3_4:77891815-77891834 | None:intergenic | 40.0% | |
!! | CATAAGAGCGGTGTTATACA+TGG | + | chr3_4:77891839-77891858 | Msa0524430:CDS | 40.0% |
TACATGGTAGCACAGTGTTT+AGG | + | chr3_4:77891855-77891874 | Msa0524430:CDS | 40.0% | |
CTTGCAACTATACCAATCAC+CGG | + | chr3_4:77892122-77892141 | Msa0524430:CDS | 40.0% | |
TACATGGTCATCCCAAACTT+TGG | - | chr3_4:77892201-77892220 | None:intergenic | 40.0% | |
!! | CCGCTCTAAGAATGTATTGA+TGG | - | chr3_4:77892371-77892390 | None:intergenic | 40.0% |
TCAATACATTCTTAGAGCGG+CGG | + | chr3_4:77892371-77892390 | Msa0524430:CDS | 40.0% | |
AATCTCAGCGAAGTCAAGGA+GGG | - | chr3_4:77891568-77891587 | None:intergenic | 45.0% | |
TAATCTCAGCGAAGTCAAGG+AGG | - | chr3_4:77891569-77891588 | None:intergenic | 45.0% | |
GCTTAATCTCAGCGAAGTCA+AGG | - | chr3_4:77891572-77891591 | None:intergenic | 45.0% | |
ACTTCGCTGAGATTAAGCTC+TGG | + | chr3_4:77891574-77891593 | Msa0524430:CDS | 45.0% | |
AGTGACGTAGAGAAAGAGGA+GGG | - | chr3_4:77891637-77891656 | None:intergenic | 45.0% | |
GACAAAGATCATGCCACCAA+AGG | - | chr3_4:77891733-77891752 | None:intergenic | 45.0% | |
ATGTGACAGCAGGGTTAATG+TGG | - | chr3_4:77891788-77891807 | None:intergenic | 45.0% | |
! | TGTCACATTCGGCCTTTTCT+TGG | + | chr3_4:77891800-77891819 | Msa0524430:CDS | 45.0% |
! | CAGTGTTTAGGTGCTATCTG+TGG | + | chr3_4:77891867-77891886 | Msa0524430:CDS | 45.0% |
AAACACCCTTACAACCACCT+CGG | + | chr3_4:77891915-77891934 | Msa0524430:CDS | 45.0% | |
! | TCCGATAATTTCAGCACCGA+GGG | - | chr3_4:77891985-77892004 | None:intergenic | 45.0% |
TTCCGATAATTTCAGCACCG+AGG | - | chr3_4:77891986-77892005 | None:intergenic | 45.0% | |
ACAGCAAAACCAATGGGCAA+AGG | - | chr3_4:77892089-77892108 | None:intergenic | 45.0% | |
CGGTGATTGGTATAGTTGCA+AGG | - | chr3_4:77892124-77892143 | None:intergenic | 45.0% | |
ACTATACCAATCACCGGTAC+CGG | + | chr3_4:77892128-77892147 | Msa0524430:CDS | 45.0% | |
TATGCATGCAGTGGATCTTC+TGG | + | chr3_4:77892307-77892326 | Msa0524430:intron | 45.0% | |
ATGCATGCAGTGGATCTTCT+GGG | + | chr3_4:77892308-77892327 | Msa0524430:intron | 45.0% | |
TGAAAGGTCAGAACAAGCAC+AGG | - | chr3_4:77892624-77892643 | None:intergenic | 45.0% | |
AATCTCAGCGAAGTCAAGGA+GGG | - | chr3_4:77891568-77891587 | None:intergenic | 45.0% | |
TAATCTCAGCGAAGTCAAGG+AGG | - | chr3_4:77891569-77891588 | None:intergenic | 45.0% | |
GCTTAATCTCAGCGAAGTCA+AGG | - | chr3_4:77891572-77891591 | None:intergenic | 45.0% | |
ACTTCGCTGAGATTAAGCTC+TGG | + | chr3_4:77891574-77891593 | Msa0524430:CDS | 45.0% | |
AGTGACGTAGAGAAAGAGGA+GGG | - | chr3_4:77891637-77891656 | None:intergenic | 45.0% | |
GACAAAGATCATGCCACCAA+AGG | - | chr3_4:77891733-77891752 | None:intergenic | 45.0% | |
ATGTGACAGCAGGGTTAATG+TGG | - | chr3_4:77891788-77891807 | None:intergenic | 45.0% | |
! | TGTCACATTCGGCCTTTTCT+TGG | + | chr3_4:77891800-77891819 | Msa0524430:CDS | 45.0% |
! | CAGTGTTTAGGTGCTATCTG+TGG | + | chr3_4:77891867-77891886 | Msa0524430:CDS | 45.0% |
AAACACCCTTACAACCACCT+CGG | + | chr3_4:77891915-77891934 | Msa0524430:CDS | 45.0% | |
! | TCCGATAATTTCAGCACCGA+GGG | - | chr3_4:77891985-77892004 | None:intergenic | 45.0% |
TTCCGATAATTTCAGCACCG+AGG | - | chr3_4:77891986-77892005 | None:intergenic | 45.0% | |
ACAGCAAAACCAATGGGCAA+AGG | - | chr3_4:77892089-77892108 | None:intergenic | 45.0% | |
CGGTGATTGGTATAGTTGCA+AGG | - | chr3_4:77892124-77892143 | None:intergenic | 45.0% | |
ACTATACCAATCACCGGTAC+CGG | + | chr3_4:77892128-77892147 | Msa0524430:CDS | 45.0% | |
TATGCATGCAGTGGATCTTC+TGG | + | chr3_4:77892307-77892326 | Msa0524430:intron | 45.0% | |
ATGCATGCAGTGGATCTTCT+GGG | + | chr3_4:77892308-77892327 | Msa0524430:intron | 45.0% | |
TGAAAGGTCAGAACAAGCAC+AGG | - | chr3_4:77892624-77892643 | None:intergenic | 45.0% | |
!! | AATTAATTAATTAATTTAGT+TGG | - | chr3_4:77892433-77892452 | None:intergenic | 5.0% |
!! | AATTAATTAATTAATTTAGT+TGG | - | chr3_4:77892433-77892452 | None:intergenic | 5.0% |
TAGTCCTTACCGTGAGGATG+TGG | - | chr3_4:77891525-77891544 | None:intergenic | 50.0% | |
TCTACGTAGTCCTTACCGTG+AGG | - | chr3_4:77891531-77891550 | None:intergenic | 50.0% | |
ATCTCAGCGAAGTCAAGGAG+GGG | - | chr3_4:77891567-77891586 | None:intergenic | 50.0% | |
CAGTGACGTAGAGAAAGAGG+AGG | - | chr3_4:77891638-77891657 | None:intergenic | 50.0% | |
CGACAGTGACGTAGAGAAAG+AGG | - | chr3_4:77891641-77891660 | None:intergenic | 50.0% | |
! | TTGGCCTTCTAGGCATAGCA+TGG | + | chr3_4:77891706-77891725 | Msa0524430:CDS | 50.0% |
AGGACCATGCTATGCCTAGA+AGG | - | chr3_4:77891713-77891732 | None:intergenic | 50.0% | |
CTAGGCATAGCATGGTCCTT+TGG | + | chr3_4:77891714-77891733 | Msa0524430:CDS | 50.0% | |
AAAGGCCGAATGTGACAGCA+GGG | - | chr3_4:77891797-77891816 | None:intergenic | 50.0% | |
AAAAGGCCGAATGTGACAGC+AGG | - | chr3_4:77891798-77891817 | None:intergenic | 50.0% | |
! | TTAGGTGCTATCTGTGGCGT+TGG | + | chr3_4:77891873-77891892 | Msa0524430:CDS | 50.0% |
! | TAGGTGCTATCTGTGGCGTT+GGG | + | chr3_4:77891874-77891893 | Msa0524430:CDS | 50.0% |
GGTGCTAACTCTGTAGCTTC+CGG | + | chr3_4:77891942-77891961 | Msa0524430:CDS | 50.0% | |
GTAGCTTCCGGTTACAGCAA+AGG | + | chr3_4:77891954-77891973 | Msa0524430:CDS | 50.0% | |
!! | GCCCTCGGTGCTGAAATTAT+CGG | + | chr3_4:77891981-77892000 | Msa0524430:CDS | 50.0% |
! | GGACTCACATGTCCCTGTTT+TGG | + | chr3_4:77892061-77892080 | Msa0524430:CDS | 50.0% |
TGGGCAAAGGAGCCAAAACA+GGG | - | chr3_4:77892076-77892095 | None:intergenic | 50.0% | |
ATGGGCAAAGGAGCCAAAAC+AGG | - | chr3_4:77892077-77892096 | None:intergenic | 50.0% | |
!!! | GTTTTGGCTCCTTTGCCCAT+TGG | + | chr3_4:77892077-77892096 | Msa0524430:CDS | 50.0% |
!! | TTGATTCCGGTACCGGTGAT+TGG | - | chr3_4:77892137-77892156 | None:intergenic | 50.0% |
ATCAACCCTGCTAGGAGCTT+CGG | + | chr3_4:77892152-77892171 | Msa0524430:CDS | 50.0% | |
ATGCAGTGGATCTTCTGGGT+TGG | + | chr3_4:77892312-77892331 | Msa0524430:intron | 50.0% | |
! | GTTGGTGGGGTTGCTTCTAA+AGG | - | chr3_4:77892415-77892434 | None:intergenic | 50.0% |
TAGTCCTTACCGTGAGGATG+TGG | - | chr3_4:77891525-77891544 | None:intergenic | 50.0% | |
TCTACGTAGTCCTTACCGTG+AGG | - | chr3_4:77891531-77891550 | None:intergenic | 50.0% | |
ATCTCAGCGAAGTCAAGGAG+GGG | - | chr3_4:77891567-77891586 | None:intergenic | 50.0% | |
CAGTGACGTAGAGAAAGAGG+AGG | - | chr3_4:77891638-77891657 | None:intergenic | 50.0% | |
CGACAGTGACGTAGAGAAAG+AGG | - | chr3_4:77891641-77891660 | None:intergenic | 50.0% | |
! | TTGGCCTTCTAGGCATAGCA+TGG | + | chr3_4:77891706-77891725 | Msa0524430:CDS | 50.0% |
AGGACCATGCTATGCCTAGA+AGG | - | chr3_4:77891713-77891732 | None:intergenic | 50.0% | |
CTAGGCATAGCATGGTCCTT+TGG | + | chr3_4:77891714-77891733 | Msa0524430:CDS | 50.0% | |
AAAGGCCGAATGTGACAGCA+GGG | - | chr3_4:77891797-77891816 | None:intergenic | 50.0% | |
AAAAGGCCGAATGTGACAGC+AGG | - | chr3_4:77891798-77891817 | None:intergenic | 50.0% | |
! | TTAGGTGCTATCTGTGGCGT+TGG | + | chr3_4:77891873-77891892 | Msa0524430:CDS | 50.0% |
! | TAGGTGCTATCTGTGGCGTT+GGG | + | chr3_4:77891874-77891893 | Msa0524430:CDS | 50.0% |
GGTGCTAACTCTGTAGCTTC+CGG | + | chr3_4:77891942-77891961 | Msa0524430:CDS | 50.0% | |
GTAGCTTCCGGTTACAGCAA+AGG | + | chr3_4:77891954-77891973 | Msa0524430:CDS | 50.0% | |
!! | GCCCTCGGTGCTGAAATTAT+CGG | + | chr3_4:77891981-77892000 | Msa0524430:CDS | 50.0% |
! | GGACTCACATGTCCCTGTTT+TGG | + | chr3_4:77892061-77892080 | Msa0524430:CDS | 50.0% |
TGGGCAAAGGAGCCAAAACA+GGG | - | chr3_4:77892076-77892095 | None:intergenic | 50.0% | |
ATGGGCAAAGGAGCCAAAAC+AGG | - | chr3_4:77892077-77892096 | None:intergenic | 50.0% | |
!!! | GTTTTGGCTCCTTTGCCCAT+TGG | + | chr3_4:77892077-77892096 | Msa0524430:CDS | 50.0% |
!! | TTGATTCCGGTACCGGTGAT+TGG | - | chr3_4:77892137-77892156 | None:intergenic | 50.0% |
ATCAACCCTGCTAGGAGCTT+CGG | + | chr3_4:77892152-77892171 | Msa0524430:CDS | 50.0% | |
ATGCAGTGGATCTTCTGGGT+TGG | + | chr3_4:77892312-77892331 | Msa0524430:intron | 50.0% | |
! | GTTGGTGGGGTTGCTTCTAA+AGG | - | chr3_4:77892415-77892434 | None:intergenic | 50.0% |
CCTTACCGTGAGGATGTGGT+AGG | - | chr3_4:77891521-77891540 | None:intergenic | 55.0% | |
CCTACCACATCCTCACGGTA+AGG | + | chr3_4:77891518-77891537 | Msa0524430:CDS | 55.0% | |
GACGTAGAGAAAGAGGAGGG+TGG | - | chr3_4:77891634-77891653 | None:intergenic | 55.0% | |
ACTGGTCCATGTGACGGTGT+TGG | + | chr3_4:77891687-77891706 | Msa0524430:CDS | 55.0% | |
AGAAGGCCAACACCGTCACA+TGG | - | chr3_4:77891696-77891715 | None:intergenic | 55.0% | |
!! | TGTGACGGTGTTGGCCTTCT+AGG | + | chr3_4:77891696-77891715 | Msa0524430:CDS | 55.0% |
GGCATAGCATGGTCCTTTGG+TGG | + | chr3_4:77891717-77891736 | Msa0524430:CDS | 55.0% | |
TACCAGCGGTGCAGTAGACA+AGG | - | chr3_4:77891755-77891774 | None:intergenic | 55.0% | |
TACTGCACCGCTGGTATCTC+CGG | + | chr3_4:77891759-77891778 | Msa0524430:CDS | 55.0% | |
AGCAGGGTTAATGTGGCCAC+CGG | - | chr3_4:77891781-77891800 | None:intergenic | 55.0% | |
! | TGCTATCTGTGGCGTTGGGT+TGG | + | chr3_4:77891878-77891897 | Msa0524430:CDS | 55.0% |
! | GGCAGAGCCTTTGCTGTAAC+CGG | - | chr3_4:77891964-77891983 | None:intergenic | 55.0% |
TACAGCAAAGGCTCTGCCCT+CGG | + | chr3_4:77891966-77891985 | Msa0524430:CDS | 55.0% | |
! | CTGACCCTAAGAGAAGCGCA+CGG | + | chr3_4:77892039-77892058 | Msa0524430:CDS | 55.0% |
! | TGACCCTAAGAGAAGCGCAC+GGG | + | chr3_4:77892040-77892059 | Msa0524430:CDS | 55.0% |
AGTCCCGTGCGCTTCTCTTA+GGG | - | chr3_4:77892046-77892065 | None:intergenic | 55.0% | |
! | AGCAGGGTTGATTCCGGTAC+CGG | - | chr3_4:77892144-77892163 | None:intergenic | 55.0% |
GTACCGGAATCAACCCTGCT+AGG | + | chr3_4:77892144-77892163 | Msa0524430:CDS | 55.0% | |
! | GCTCCTAGCAGGGTTGATTC+CGG | - | chr3_4:77892150-77892169 | None:intergenic | 55.0% |
! | GATCTTCTGGGTTGGACCGT+TGG | + | chr3_4:77892320-77892339 | Msa0524430:CDS | 55.0% |
! | TTCTGGGTTGGACCGTTGGT+GGG | + | chr3_4:77892324-77892343 | Msa0524430:CDS | 55.0% |
TCTTAGAGCGGCGGCTATCA+AGG | + | chr3_4:77892380-77892399 | Msa0524430:CDS | 55.0% | |
CCTTACCGTGAGGATGTGGT+AGG | - | chr3_4:77891521-77891540 | None:intergenic | 55.0% | |
CCTACCACATCCTCACGGTA+AGG | + | chr3_4:77891518-77891537 | Msa0524430:CDS | 55.0% | |
GACGTAGAGAAAGAGGAGGG+TGG | - | chr3_4:77891634-77891653 | None:intergenic | 55.0% | |
ACTGGTCCATGTGACGGTGT+TGG | + | chr3_4:77891687-77891706 | Msa0524430:CDS | 55.0% | |
AGAAGGCCAACACCGTCACA+TGG | - | chr3_4:77891696-77891715 | None:intergenic | 55.0% | |
!! | TGTGACGGTGTTGGCCTTCT+AGG | + | chr3_4:77891696-77891715 | Msa0524430:CDS | 55.0% |
GGCATAGCATGGTCCTTTGG+TGG | + | chr3_4:77891717-77891736 | Msa0524430:CDS | 55.0% | |
TACCAGCGGTGCAGTAGACA+AGG | - | chr3_4:77891755-77891774 | None:intergenic | 55.0% | |
TACTGCACCGCTGGTATCTC+CGG | + | chr3_4:77891759-77891778 | Msa0524430:CDS | 55.0% | |
AGCAGGGTTAATGTGGCCAC+CGG | - | chr3_4:77891781-77891800 | None:intergenic | 55.0% | |
! | TGCTATCTGTGGCGTTGGGT+TGG | + | chr3_4:77891878-77891897 | Msa0524430:CDS | 55.0% |
! | GGCAGAGCCTTTGCTGTAAC+CGG | - | chr3_4:77891964-77891983 | None:intergenic | 55.0% |
TACAGCAAAGGCTCTGCCCT+CGG | + | chr3_4:77891966-77891985 | Msa0524430:CDS | 55.0% | |
! | CTGACCCTAAGAGAAGCGCA+CGG | + | chr3_4:77892039-77892058 | Msa0524430:CDS | 55.0% |
! | TGACCCTAAGAGAAGCGCAC+GGG | + | chr3_4:77892040-77892059 | Msa0524430:CDS | 55.0% |
AGTCCCGTGCGCTTCTCTTA+GGG | - | chr3_4:77892046-77892065 | None:intergenic | 55.0% | |
! | AGCAGGGTTGATTCCGGTAC+CGG | - | chr3_4:77892144-77892163 | None:intergenic | 55.0% |
GTACCGGAATCAACCCTGCT+AGG | + | chr3_4:77892144-77892163 | Msa0524430:CDS | 55.0% | |
! | GCTCCTAGCAGGGTTGATTC+CGG | - | chr3_4:77892150-77892169 | None:intergenic | 55.0% |
! | GATCTTCTGGGTTGGACCGT+TGG | + | chr3_4:77892320-77892339 | Msa0524430:CDS | 55.0% |
! | TTCTGGGTTGGACCGTTGGT+GGG | + | chr3_4:77892324-77892343 | Msa0524430:CDS | 55.0% |
TCTTAGAGCGGCGGCTATCA+AGG | + | chr3_4:77892380-77892399 | Msa0524430:CDS | 55.0% | |
GGGCACCTACCACATCCTCA+CGG | + | chr3_4:77891513-77891532 | Msa0524430:CDS | 60.0% | |
!! | AAGTCAAGGAGGGGTGCTGG+TGG | - | chr3_4:77891558-77891577 | None:intergenic | 60.0% |
GTCACTGTCGCCACCGTCAT+TGG | + | chr3_4:77891651-77891670 | Msa0524430:CDS | 60.0% | |
GTCCTTGTCTACTGCACCGC+TGG | + | chr3_4:77891750-77891769 | Msa0524430:CDS | 60.0% | |
!! | CTGTGGCGTTGGGTTGGTGA+AGG | + | chr3_4:77891884-77891903 | Msa0524430:CDS | 60.0% |
CACCCTTACAACCACCTCGG+CGG | + | chr3_4:77891918-77891937 | Msa0524430:CDS | 60.0% | |
GAGTCCCGTGCGCTTCTCTT+AGG | - | chr3_4:77892047-77892066 | None:intergenic | 60.0% | |
! | CAGCACCGAAGCTCCTAGCA+GGG | - | chr3_4:77892160-77892179 | None:intergenic | 60.0% |
! | CTTCTGGGTTGGACCGTTGG+TGG | + | chr3_4:77892323-77892342 | Msa0524430:CDS | 60.0% |
GGGCACCTACCACATCCTCA+CGG | + | chr3_4:77891513-77891532 | Msa0524430:CDS | 60.0% | |
!! | AAGTCAAGGAGGGGTGCTGG+TGG | - | chr3_4:77891558-77891577 | None:intergenic | 60.0% |
GTCACTGTCGCCACCGTCAT+TGG | + | chr3_4:77891651-77891670 | Msa0524430:CDS | 60.0% | |
GTCCTTGTCTACTGCACCGC+TGG | + | chr3_4:77891750-77891769 | Msa0524430:CDS | 60.0% | |
!! | CTGTGGCGTTGGGTTGGTGA+AGG | + | chr3_4:77891884-77891903 | Msa0524430:CDS | 60.0% |
CACCCTTACAACCACCTCGG+CGG | + | chr3_4:77891918-77891937 | Msa0524430:CDS | 60.0% | |
GAGTCCCGTGCGCTTCTCTT+AGG | - | chr3_4:77892047-77892066 | None:intergenic | 60.0% | |
! | CAGCACCGAAGCTCCTAGCA+GGG | - | chr3_4:77892160-77892179 | None:intergenic | 60.0% |
! | CTTCTGGGTTGGACCGTTGG+TGG | + | chr3_4:77892323-77892342 | Msa0524430:CDS | 60.0% |
!! | CAAGGAGGGGTGCTGGTGGT+GGG | - | chr3_4:77891554-77891573 | None:intergenic | 65.0% |
!! | TCAAGGAGGGGTGCTGGTGG+TGG | - | chr3_4:77891555-77891574 | None:intergenic | 65.0% |
! | GCGAAGTCAAGGAGGGGTGC+TGG | - | chr3_4:77891561-77891580 | None:intergenic | 65.0% |
TGCACCGCTGGTATCTCCGG+TGG | + | chr3_4:77891762-77891781 | Msa0524430:CDS | 65.0% | |
GTGGCCACCGGAGATACCAG+CGG | - | chr3_4:77891769-77891788 | None:intergenic | 65.0% | |
CGCCGCCGAGGTGGTTGTAA+GGG | - | chr3_4:77891923-77891942 | None:intergenic | 65.0% | |
CCTTACAACCACCTCGGCGG+CGG | + | chr3_4:77891921-77891940 | Msa0524430:CDS | 65.0% | |
! | GCAGCACCGAAGCTCCTAGC+AGG | - | chr3_4:77892161-77892180 | None:intergenic | 65.0% |
! | TGGACCGTTGGTGGGAGCGT+TGG | + | chr3_4:77892332-77892351 | Msa0524430:CDS | 65.0% |
GCTGCCAACGCTCCCACCAA+CGG | - | chr3_4:77892339-77892358 | None:intergenic | 65.0% | |
!! | GTTGGTGGGAGCGTTGGCAG+CGG | + | chr3_4:77892338-77892357 | Msa0524430:CDS | 65.0% |
AGCGGCGGCTATCAAGGCGT+TGG | + | chr3_4:77892386-77892405 | Msa0524430:CDS | 65.0% | |
! | GCGGCGGCTATCAAGGCGTT+GGG | + | chr3_4:77892387-77892406 | Msa0524430:CDS | 65.0% |
!! | CAAGGAGGGGTGCTGGTGGT+GGG | - | chr3_4:77891554-77891573 | None:intergenic | 65.0% |
!! | TCAAGGAGGGGTGCTGGTGG+TGG | - | chr3_4:77891555-77891574 | None:intergenic | 65.0% |
! | GCGAAGTCAAGGAGGGGTGC+TGG | - | chr3_4:77891561-77891580 | None:intergenic | 65.0% |
TGCACCGCTGGTATCTCCGG+TGG | + | chr3_4:77891762-77891781 | Msa0524430:CDS | 65.0% | |
GTGGCCACCGGAGATACCAG+CGG | - | chr3_4:77891769-77891788 | None:intergenic | 65.0% | |
CGCCGCCGAGGTGGTTGTAA+GGG | - | chr3_4:77891923-77891942 | None:intergenic | 65.0% | |
CCTTACAACCACCTCGGCGG+CGG | + | chr3_4:77891921-77891940 | Msa0524430:CDS | 65.0% | |
! | GCAGCACCGAAGCTCCTAGC+AGG | - | chr3_4:77892161-77892180 | None:intergenic | 65.0% |
! | TGGACCGTTGGTGGGAGCGT+TGG | + | chr3_4:77892332-77892351 | Msa0524430:CDS | 65.0% |
GCTGCCAACGCTCCCACCAA+CGG | - | chr3_4:77892339-77892358 | None:intergenic | 65.0% | |
!! | GTTGGTGGGAGCGTTGGCAG+CGG | + | chr3_4:77892338-77892357 | Msa0524430:CDS | 65.0% |
AGCGGCGGCTATCAAGGCGT+TGG | + | chr3_4:77892386-77892405 | Msa0524430:CDS | 65.0% | |
! | GCGGCGGCTATCAAGGCGTT+GGG | + | chr3_4:77892387-77892406 | Msa0524430:CDS | 65.0% |
CCGCCGCCGAGGTGGTTGTA+AGG | - | chr3_4:77891924-77891943 | None:intergenic | 70.0% | |
AGTTAGCACCGCCGCCGAGG+TGG | - | chr3_4:77891932-77891951 | None:intergenic | 70.0% | |
CAGAGTTAGCACCGCCGCCG+AGG | - | chr3_4:77891935-77891954 | None:intergenic | 70.0% | |
CCGCCGCCGAGGTGGTTGTA+AGG | - | chr3_4:77891924-77891943 | None:intergenic | 70.0% | |
AGTTAGCACCGCCGCCGAGG+TGG | - | chr3_4:77891932-77891951 | None:intergenic | 70.0% | |
CAGAGTTAGCACCGCCGCCG+AGG | - | chr3_4:77891935-77891954 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_4 | gene | 77891435 | 77892675 | 77891435 | ID=Msa0524430;Name=Msa0524430 |
chr3_4 | mRNA | 77891435 | 77892675 | 77891435 | ID=Msa0524430-mRNA-1;Parent=Msa0524430;Name=Msa0524430-mRNA-1;_AED=0.02;_eAED=0.02;_QI=54|1|1|1|1|1|2|238|282 |
chr3_4 | exon | 77891435 | 77892217 | 77891435 | ID=Msa0524430-mRNA-1:exon:22937;Parent=Msa0524430-mRNA-1 |
chr3_4 | exon | 77892318 | 77892675 | 77892318 | ID=Msa0524430-mRNA-1:exon:22938;Parent=Msa0524430-mRNA-1 |
chr3_4 | five_prime_UTR | 77891435 | 77891488 | 77891435 | ID=Msa0524430-mRNA-1:five_prime_utr;Parent=Msa0524430-mRNA-1 |
chr3_4 | CDS | 77891489 | 77892217 | 77891489 | ID=Msa0524430-mRNA-1:cds;Parent=Msa0524430-mRNA-1 |
chr3_4 | CDS | 77892318 | 77892437 | 77892318 | ID=Msa0524430-mRNA-1:cds;Parent=Msa0524430-mRNA-1 |
chr3_4 | three_prime_UTR | 77892438 | 77892675 | 77892438 | ID=Msa0524430-mRNA-1:three_prime_utr;Parent=Msa0524430-mRNA-1 |
Gene Sequence |
Protein sequence |