AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0524320

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0524320 MtrunA17_Chr3g0145671 97.163 282 5 1 1 282 1 279 0.0 548
Msa0524320 MtrunA17_Chr7g0264111 79.443 287 48 3 1 279 1 284 2.63e-162 452
Msa0524320 MtrunA17_Chr2g0326621 74.126 286 67 1 1 279 1 286 2.21e-156 437
Msa0524320 MtrunA17_Chr4g0029071 75.532 282 60 2 4 279 6 284 7.40e-156 436
Msa0524320 MtrunA17_Chr1g0199731 77.113 284 56 2 4 281 6 286 4.25e-155 434
Msa0524320 MtrunA17_Chr8g0386961 69.145 269 82 1 4 271 16 284 8.18e-134 380
Msa0524320 MtrunA17_Chr3g0113211 71.648 261 73 1 13 272 28 288 1.91e-133 379
Msa0524320 MtrunA17_Chr4g0006001 69.922 256 77 0 17 272 33 288 2.45e-133 379
Msa0524320 MtrunA17_Chr5g0436701 71.595 257 72 1 17 272 32 288 2.99e-131 374
Msa0524320 MtrunA17_Chr5g0397391 67.778 270 86 1 4 272 16 285 6.52e-130 370
Msa0524320 MtrunA17_Chr2g0331261 40.175 229 123 5 40 265 20 237 1.45e-40 140
Msa0524320 MtrunA17_Chr8g0340161 41.364 220 109 6 40 253 19 224 2.13e-37 132
Msa0524320 MtrunA17_Chr4g0030861 38.627 233 128 6 45 273 26 247 1.61e-36 130
Msa0524320 MtrunA17_Chr1g0188771 38.961 231 123 7 40 265 21 238 4.27e-35 127
Msa0524320 MtrunA17_Chr1g0212671 38.095 231 129 5 40 267 21 240 4.58e-34 124
Msa0524320 MtrunA17_Chr5g0399341 40.092 217 115 5 40 253 19 223 2.40e-33 122
Msa0524320 MtrunA17_Chr7g0222791 36.681 229 131 5 40 265 21 238 1.77e-32 120
Msa0524320 MtrunA17_Chr6g0478191 37.555 229 129 5 40 265 21 238 2.78e-32 119
Msa0524320 MtrunA17_Chr1g0146161 35.622 233 127 8 40 266 19 234 1.52e-31 117
Msa0524320 MtrunA17_Chr1g0146171 37.021 235 121 10 40 266 19 234 3.45e-31 116
Msa0524320 MtrunA17_Chr7g0264961 35.945 217 124 5 40 253 21 225 1.13e-30 115
Msa0524320 MtrunA17_Chr8g0379901 31.222 221 137 5 38 258 37 242 3.18e-23 95.9
Msa0524320 MtrunA17_Chr2g0333771 32.127 221 134 6 44 264 84 288 5.99e-23 95.9
Msa0524320 MtrunA17_Chr2g0284631 30.222 225 142 5 40 264 91 300 8.15e-22 93.2
Msa0524320 MtrunA17_Chr4g0001221 29.391 279 160 10 7 277 55 304 1.82e-21 91.7
Msa0524320 MtrunA17_Chr3g0079421 28.400 250 160 7 34 282 20 251 2.98e-21 90.5
Msa0524320 MtrunA17_Chr5g0435051 29.098 244 155 6 37 278 37 264 4.94e-21 90.1
Msa0524320 MtrunA17_Chr5g0426131 28.509 228 148 5 37 264 35 247 3.27e-20 87.4
Msa0524320 MtrunA17_Chr8g0379911 30.263 228 144 5 37 264 35 247 7.66e-20 86.7
Msa0524320 MtrunA17_Chr4g0038591 28.448 232 143 8 39 255 50 273 2.87e-19 86.3
Msa0524320 MtrunA17_Chr4g0038611 32.418 182 107 6 87 255 32 210 1.51e-18 83.2
Msa0524320 MtrunA17_Chr2g0284591 29.515 227 145 5 38 264 34 245 2.97e-18 82.4
Msa0524320 MtrunA17_Chr4g0020781 34.444 180 101 4 89 265 30 195 3.56e-18 80.9
Msa0524320 MtrunA17_Chr2g0284611 29.075 227 146 5 38 264 36 247 1.03e-17 80.9
Msa0524320 MtrunA17_Chr7g0217331 29.596 223 137 7 38 258 35 239 3.66e-17 79.3
Msa0524320 MtrunA17_Chr2g0284581 28.384 229 141 6 40 264 38 247 1.27e-16 77.8
Msa0524320 MtrunA17_Chr1g0201331 28.947 228 146 6 37 264 71 282 2.07e-16 77.8
Msa0524320 MtrunA17_Chr4g0044201 29.148 223 131 7 40 261 35 231 2.23e-16 77.0
Msa0524320 MtrunA17_Chr2g0284601 31.217 189 116 5 77 264 24 199 8.46e-16 74.7
Msa0524320 MtrunA17_Chr1g0184541 26.271 236 142 7 37 264 59 270 8.86e-15 72.8
Msa0524320 MtrunA17_Chr4g0001111 30.220 182 105 7 7 187 55 215 1.90e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0524320 AT4G35100.1 89.716 282 27 1 1 282 1 280 0.0 514
Msa0524320 AT4G35100.2 89.716 282 27 1 1 282 1 280 0.0 514
Msa0524320 AT2G16850.1 90.780 282 22 1 1 282 1 278 0.0 513
Msa0524320 AT5G60660.1 75.000 284 64 2 1 278 1 283 2.96e-153 429
Msa0524320 AT3G54820.1 74.825 286 64 2 1 280 1 284 3.29e-152 427
Msa0524320 AT3G53420.1 77.985 268 53 1 17 278 16 283 6.57e-152 426
Msa0524320 AT3G53420.2 77.985 268 53 1 17 278 16 283 6.57e-152 426
Msa0524320 AT2G37170.2 73.611 288 66 3 1 278 37 324 1.04e-151 427
Msa0524320 AT2G37170.1 74.564 287 58 4 1 278 1 281 8.96e-151 423
Msa0524320 AT2G39010.1 74.126 286 64 3 1 279 1 283 1.22e-150 423
Msa0524320 AT2G37180.1 74.913 287 57 4 1 278 1 281 5.76e-150 421
Msa0524320 AT4G00430.1 74.609 256 65 0 17 272 30 285 3.07e-139 394
Msa0524320 AT2G45960.1 72.656 256 70 0 17 272 29 284 4.13e-135 384
Msa0524320 AT1G01620.1 74.219 256 66 0 17 272 29 284 1.30e-131 375
Msa0524320 AT4G23400.1 70.632 269 79 0 4 272 17 285 7.85e-129 367
Msa0524320 AT3G61430.2 71.875 256 72 0 17 272 29 284 1.16e-126 362
Msa0524320 AT3G61430.1 71.875 256 72 0 17 272 29 284 1.16e-126 362
Msa0524320 AT2G45960.2 75.330 227 56 0 17 243 29 255 3.93e-123 353
Msa0524320 AT2G45960.3 75.330 227 56 0 17 243 29 255 1.14e-121 350
Msa0524320 AT1G01620.2 75.472 212 52 0 61 272 1 212 2.27e-114 328
Msa0524320 AT2G39010.2 71.569 204 48 3 1 197 1 201 3.92e-98 287
Msa0524320 AT4G00430.2 75.135 185 46 0 17 201 30 214 2.56e-96 283
Msa0524320 AT3G16240.1 42.857 217 110 5 40 253 19 224 2.46e-38 135
Msa0524320 AT4G01470.1 37.555 229 129 5 40 265 21 238 5.49e-36 129
Msa0524320 AT5G47450.1 41.228 228 119 7 37 260 16 232 6.06e-36 129
Msa0524320 AT3G26520.1 37.391 230 128 6 40 265 22 239 2.75e-34 125
Msa0524320 AT1G73190.1 36.325 234 130 5 40 265 24 246 5.27e-33 122
Msa0524320 AT1G17810.1 37.607 234 127 5 40 265 24 246 1.69e-32 120
Msa0524320 AT4G17340.1 38.462 247 129 8 40 282 19 246 4.44e-32 119
Msa0524320 AT2G36830.1 35.931 231 133 6 40 266 21 240 1.53e-31 117
Msa0524320 AT2G25810.1 37.281 228 127 7 40 265 19 232 3.50e-30 114
Msa0524320 AT3G47440.1 31.897 232 137 8 40 265 23 239 2.67e-24 99.0
Msa0524320 AT4G19030.1 27.586 261 170 5 1 258 21 265 2.04e-19 86.3
Msa0524320 AT1G80760.1 29.098 244 154 6 37 277 77 304 4.67e-19 85.5
Msa0524320 AT1G31885.1 27.876 226 147 5 37 258 40 253 2.45e-18 84.0
Msa0524320 AT4G10380.1 29.778 225 142 5 37 261 75 283 1.26e-17 81.6
Msa0524320 AT5G37820.1 29.515 227 141 6 40 264 43 252 1.49e-17 80.9
Msa0524320 AT5G37820.2 29.515 227 141 6 40 264 79 288 2.13e-17 81.3
Msa0524320 AT4G18910.1 27.232 224 149 4 38 258 50 262 5.82e-16 76.6
Msa0524320 AT5G37810.1 26.692 266 174 7 2 264 5 252 1.35e-15 75.5
Msa0524320 AT2G34390.1 28.571 231 148 7 38 264 46 263 1.67e-14 72.4
Msa0524320 AT1G31885.2 28.947 190 122 4 73 258 19 199 2.63e-14 71.6
Msa0524320 AT2G34390.2 28.448 232 149 7 37 264 3 221 7.83e-14 70.1
Msa0524320 AT3G06100.1 30.000 230 136 9 40 264 46 255 2.66e-12 65.9
Msa0524320 AT3G06100.2 29.515 227 135 8 43 264 1 207 2.95e-11 62.4

Find 107 sgRNAs with CRISPR-Local

Find 236 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTGACGGTGTTGGCCTTCT+AGG 0.206372 3_4:+77807097 Msa0524320:CDS
GAGTCCCGTGCGCTTCTCTT+AGG 0.269420 3_4:-77807445 None:intergenic
TCAAGGAGGGGTGCTGGTGG+TGG 0.295321 3_4:-77806953 None:intergenic
TATGCATGCAGTGGATCTTC+TGG 0.301366 3_4:+77807708 Msa0524320:intron
TCTTCAACAATGCCAAAGTT+TGG 0.312604 3_4:+77807587 Msa0524320:CDS
GGACTCACATGTCCCTGTTT+TGG 0.328630 3_4:+77807462 Msa0524320:CDS
AATTAATTAACTAATTTAGT+TGG 0.361626 3_4:-77807831 None:intergenic
CTAGGCATAGCATGGTCCTT+TGG 0.364281 3_4:+77807115 Msa0524320:CDS
ATGGGCAAAGGAGCCAAAAC+AGG 0.383343 3_4:-77807475 None:intergenic
CCGCCGCCGAGGTGGTTGTA+AGG 0.390135 3_4:-77807322 None:intergenic
CTTCAACAATGCCAAAGTTT+GGG 0.399277 3_4:+77807588 Msa0524320:CDS
GGCAGAGCCTTTGCTGTAAC+CGG 0.402530 3_4:-77807362 None:intergenic
CCGCTCTAAGAATGTATTGA+TGG 0.413506 3_4:-77807769 None:intergenic
CAAGGAGGGGTGCTGGTGGT+GGG 0.413906 3_4:-77806952 None:intergenic
GTCCTTGTCTACTGCACCGC+TGG 0.418520 3_4:+77807151 Msa0524320:CDS
GCCCTCGGTGCTGAAATTAT+CGG 0.421803 3_4:+77807382 Msa0524320:CDS
AGGACCATGCTATGCCTAGA+AGG 0.427239 3_4:-77807111 None:intergenic
GTTGGTGGGGTTGCTTCTAA+AGG 0.429287 3_4:-77807813 None:intergenic
AATTAACTAATTTAGTTGGT+GGG 0.430160 3_4:-77807827 None:intergenic
TACTGCACCGCTGGTATCTC+CGG 0.434993 3_4:+77807160 Msa0524320:CDS
AGTCCCGTGCGCTTCTCTTA+GGG 0.437868 3_4:-77807444 None:intergenic
GCTCCTAGCAGGGTTGATTC+CGG 0.438753 3_4:-77807548 None:intergenic
CTTCTGGGTTGGACCGTTGG+TGG 0.441035 3_4:+77807724 Msa0524320:CDS
TGGACCGTTGGTGGGAGCGT+TGG 0.441974 3_4:+77807733 Msa0524320:CDS
TTGATTCCGGTACCGGTGAT+TGG 0.445472 3_4:-77807535 None:intergenic
ATCAACCCTGCTAGGAGCTT+CGG 0.445533 3_4:+77807553 Msa0524320:CDS
TACATGGTAGCACAGTGTTT+AGG 0.447822 3_4:+77807256 Msa0524320:CDS
GCGGCGGCTATCAAGGCGTT+GGG 0.451615 3_4:+77807788 Msa0524320:CDS
TCTAAAGAAGTGAGTGAAGA+AGG 0.451723 3_4:+77806893 Msa0524320:CDS
AGCGGCGGCTATCAAGGCGT+TGG 0.453049 3_4:+77807787 Msa0524320:CDS
TCTTAGAGCGGCGGCTATCA+AGG 0.465345 3_4:+77807781 Msa0524320:CDS
AGCAGGGTTGATTCCGGTAC+CGG 0.467989 3_4:-77807542 None:intergenic
ATTAACCCTGCTGTCACATT+CGG 0.470489 3_4:+77807190 Msa0524320:CDS
GATCTTCTGGGTTGGACCGT+TGG 0.472135 3_4:+77807721 Msa0524320:CDS
TTCTGGGTTGGACCGTTGGT+GGG 0.480051 3_4:+77807725 Msa0524320:CDS
GCGAAGTCAAGGAGGGGTGC+TGG 0.483574 3_4:-77806959 None:intergenic
TGCTATCTGTGGCGTTGGGT+TGG 0.487734 3_4:+77807279 Msa0524320:CDS
GTCACTGTCGCCACCGTCAT+TGG 0.492002 3_4:+77807052 Msa0524320:CDS
CTGTGGCGTTGGGTTGGTGA+AGG 0.493175 3_4:+77807285 Msa0524320:CDS
TAATTAACTAATTTAGTTGG+TGG 0.496888 3_4:-77807828 None:intergenic
GGCATAGCATGGTCCTTTGG+TGG 0.497936 3_4:+77807118 Msa0524320:CDS
GCAGCACCGAAGCTCCTAGC+AGG 0.500446 3_4:-77807559 None:intergenic
TACAGCAAAGGCTCTGCCCT+CGG 0.501785 3_4:+77807367 Msa0524320:CDS
TTAGGTGCTATCTGTGGCGT+TGG 0.502610 3_4:+77807274 Msa0524320:CDS
CGCCGCCGAGGTGGTTGTAA+GGG 0.503836 3_4:-77807321 None:intergenic
TTAATTAATTAATTAACAGT+AGG 0.506058 3_4:+77807844 Msa0524320:three_prime_UTR
ACACTTTACGAGCCAAGAAA+AGG 0.506621 3_4:-77807213 None:intergenic
CGACAGTGACGTAGAGAAAG+AGG 0.507110 3_4:-77807039 None:intergenic
ATTAACTAATTTAGTTGGTG+GGG 0.507877 3_4:-77807826 None:intergenic
ACTATACCAATCACCGGTAC+CGG 0.509500 3_4:+77807529 Msa0524320:CDS
TACATGGTCATCCCAAACTT+TGG 0.513712 3_4:-77807599 None:intergenic
CATAAGAGCGGTGTTATACA+TGG 0.519758 3_4:+77807240 Msa0524320:CDS
AAAAGGCCGAATGTGACAGC+AGG 0.520051 3_4:-77807196 None:intergenic
ATGCATGCAGTGGATCTTCT+GGG 0.527197 3_4:+77807709 Msa0524320:intron
ATAAATAAATATGAAATGAA+AGG 0.548453 3_4:-77808038 None:intergenic
CCTTACAACCACCTCGGCGG+CGG 0.549715 3_4:+77807322 Msa0524320:CDS
GGTGCTAACTCTGTAGCTTC+CGG 0.550093 3_4:+77807343 Msa0524320:CDS
GCTTAATCTCAGCGAAGTCA+AGG 0.551663 3_4:-77806970 None:intergenic
TAGGTGCTATCTGTGGCGTT+GGG 0.554325 3_4:+77807275 Msa0524320:CDS
TAGTCCTTACCGTGAGGATG+TGG 0.555862 3_4:-77806923 None:intergenic
GTTGGTGGGAGCGTTGGCAG+CGG 0.556763 3_4:+77807739 Msa0524320:CDS
TCCGATAATTTCAGCACCGA+GGG 0.562447 3_4:-77807383 None:intergenic
AAGTCAAGGAGGGGTGCTGG+TGG 0.564356 3_4:-77806956 None:intergenic
GTAGCTTCCGGTTACAGCAA+AGG 0.567822 3_4:+77807355 Msa0524320:CDS
ACAGCAAAACCAATGGGCAA+AGG 0.573216 3_4:-77807487 None:intergenic
AGCAGGGTTAATGTGGCCAC+CGG 0.573223 3_4:-77807179 None:intergenic
TTGGCCTTCTAGGCATAGCA+TGG 0.579145 3_4:+77807107 Msa0524320:CDS
CCTACCACATCCTCACGGTA+AGG 0.579509 3_4:+77806919 Msa0524320:CDS
TGAAAGGTCAGAACAAGCAC+AGG 0.583045 3_4:-77808022 None:intergenic
GCTGCCAACGCTCCCACCAA+CGG 0.587110 3_4:-77807737 None:intergenic
CTAAAGAAGTGAGTGAAGAA+GGG 0.592831 3_4:+77806894 Msa0524320:CDS
TACCAGCGGTGCAGTAGACA+AGG 0.595575 3_4:-77807153 None:intergenic
GACAAAGATCATGCCACCAA+AGG 0.596121 3_4:-77807131 None:intergenic
ACTTCGCTGAGATTAAGCTC+TGG 0.596756 3_4:+77806975 Msa0524320:CDS
ATGTGACAGCAGGGTTAATG+TGG 0.601114 3_4:-77807186 None:intergenic
CGGTGATTGGTATAGTTGCA+AGG 0.601911 3_4:-77807522 None:intergenic
CAGAGTTAGCACCGCCGCCG+AGG 0.603070 3_4:-77807333 None:intergenic
CAGCACCGAAGCTCCTAGCA+GGG 0.610916 3_4:-77807558 None:intergenic
GTACCGGAATCAACCCTGCT+AGG 0.610944 3_4:+77807545 Msa0524320:CDS
AATCTCAGCGAAGTCAAGGA+GGG 0.616287 3_4:-77806966 None:intergenic
AGAAGGCCAACACCGTCACA+TGG 0.616986 3_4:-77807094 None:intergenic
ATGCAGTGGATCTTCTGGGT+TGG 0.623221 3_4:+77807713 Msa0524320:intron
TGCACCGCTGGTATCTCCGG+TGG 0.624717 3_4:+77807163 Msa0524320:CDS
ATCTCAGCGAAGTCAAGGAG+GGG 0.630738 3_4:-77806965 None:intergenic
CCTTACCGTGAGGATGTGGT+AGG 0.631606 3_4:-77806919 None:intergenic
TGACCCTAAGAGAAGCGCAC+GGG 0.634134 3_4:+77807441 Msa0524320:CDS
AAACAAACTGGTCCATGTGA+CGG 0.634416 3_4:+77807082 Msa0524320:CDS
CTTGCAACTATACCAATCAC+CGG 0.635837 3_4:+77807523 Msa0524320:CDS
TGGGCAAAGGAGCCAAAACA+GGG 0.637363 3_4:-77807474 None:intergenic
AGTTAGCACCGCCGCCGAGG+TGG 0.643604 3_4:-77807330 None:intergenic
CAGTGACGTAGAGAAAGAGG+AGG 0.644359 3_4:-77807036 None:intergenic
CAGTGTTTAGGTGCTATCTG+TGG 0.653498 3_4:+77807268 Msa0524320:CDS
AAAGGCCGAATGTGACAGCA+GGG 0.654056 3_4:-77807195 None:intergenic
CACCCTTACAACCACCTCGG+CGG 0.654519 3_4:+77807319 Msa0524320:CDS
TAATCTCAGCGAAGTCAAGG+AGG 0.655437 3_4:-77806967 None:intergenic
ACTGGTCCATGTGACGGTGT+TGG 0.657929 3_4:+77807088 Msa0524320:CDS
TTCCGATAATTTCAGCACCG+AGG 0.665140 3_4:-77807384 None:intergenic
TCAATACATTCTTAGAGCGG+CGG 0.665343 3_4:+77807772 Msa0524320:CDS
CTGACCCTAAGAGAAGCGCA+CGG 0.668284 3_4:+77807440 Msa0524320:CDS
CCATCAATACATTCTTAGAG+CGG 0.687313 3_4:+77807769 Msa0524320:CDS
TAAAGTGTCTCTCATAAGAG+CGG 0.688091 3_4:+77807228 Msa0524320:CDS
AAACACCCTTACAACCACCT+CGG 0.690282 3_4:+77807316 Msa0524320:CDS
AGTGACGTAGAGAAAGAGGA+GGG 0.690484 3_4:-77807035 None:intergenic
GGGCACCTACCACATCCTCA+CGG 0.692416 3_4:+77806914 Msa0524320:CDS
GACGTAGAGAAAGAGGAGGG+TGG 0.694343 3_4:-77807032 None:intergenic
GTGGCCACCGGAGATACCAG+CGG 0.716451 3_4:-77807167 None:intergenic
TCTACGTAGTCCTTACCGTG+AGG 0.728979 3_4:-77806929 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAATTAACTAATTTAGT+TGG - chr3_4:77807834-77807853 None:intergenic 10.0%
!! TTAATTAATTAATTAACAGT+AGG + chr3_4:77807844-77807863 Msa0524320:three_prime_UTR 10.0%
!! ATAAATAAATATGAAATGAA+AGG - chr3_4:77808041-77808060 None:intergenic 10.0%
!! AATTAATTAACTAATTTAGT+TGG - chr3_4:77807834-77807853 None:intergenic 10.0%
!! TTAATTAATTAATTAACAGT+AGG + chr3_4:77807844-77807863 Msa0524320:three_prime_UTR 10.0%
!! ATAAATAAATATGAAATGAA+AGG - chr3_4:77808041-77808060 None:intergenic 10.0%
!! AAAGATATAATTAACATACA+TGG - chr3_4:77807618-77807637 None:intergenic 15.0%
!! AAAGATATAATTAACATACA+TGG - chr3_4:77807618-77807637 None:intergenic 15.0%
!! AATTAACTAATTTAGTTGGT+GGG - chr3_4:77807830-77807849 None:intergenic 20.0%
!! TAATTAACTAATTTAGTTGG+TGG - chr3_4:77807831-77807850 None:intergenic 20.0%
!! AATTAACTAATTTAGTTGGT+GGG - chr3_4:77807830-77807849 None:intergenic 20.0%
!! TAATTAACTAATTTAGTTGG+TGG - chr3_4:77807831-77807850 None:intergenic 20.0%
! ATAAAAACAGCAAAACCAAT+GGG - chr3_4:77807496-77807515 None:intergenic 25.0%
!! ATTAACTAATTTAGTTGGTG+GGG - chr3_4:77807829-77807848 None:intergenic 25.0%
! ATAAAAACAGCAAAACCAAT+GGG - chr3_4:77807496-77807515 None:intergenic 25.0%
!! ATTAACTAATTTAGTTGGTG+GGG - chr3_4:77807829-77807848 None:intergenic 25.0%
!!! TTGTTTTTTGTGACCAATGA+CGG - chr3_4:77807068-77807087 None:intergenic 30.0%
ATTGGTCACAAAAAACAAAC+TGG + chr3_4:77807070-77807089 Msa0524320:CDS 30.0%
! AATTATCGGAACTTTTGTGT+TGG + chr3_4:77807396-77807415 Msa0524320:CDS 30.0%
CATAAAAACAGCAAAACCAA+TGG - chr3_4:77807497-77807516 None:intergenic 30.0%
!!! CATTGGTTTTGCTGTTTTTA+TGG + chr3_4:77807495-77807514 Msa0524320:CDS 30.0%
TATACTATATATGCATGCAG+TGG + chr3_4:77807699-77807718 Msa0524320:intron 30.0%
!!! TTGTTTTTTGTGACCAATGA+CGG - chr3_4:77807068-77807087 None:intergenic 30.0%
ATTGGTCACAAAAAACAAAC+TGG + chr3_4:77807070-77807089 Msa0524320:CDS 30.0%
! AATTATCGGAACTTTTGTGT+TGG + chr3_4:77807396-77807415 Msa0524320:CDS 30.0%
CATAAAAACAGCAAAACCAA+TGG - chr3_4:77807497-77807516 None:intergenic 30.0%
!!! CATTGGTTTTGCTGTTTTTA+TGG + chr3_4:77807495-77807514 Msa0524320:CDS 30.0%
TATACTATATATGCATGCAG+TGG + chr3_4:77807699-77807718 Msa0524320:intron 30.0%
TCTAAAGAAGTGAGTGAAGA+AGG + chr3_4:77806893-77806912 Msa0524320:CDS 35.0%
CTAAAGAAGTGAGTGAAGAA+GGG + chr3_4:77806894-77806913 Msa0524320:CDS 35.0%
! TAAAGTGTCTCTCATAAGAG+CGG + chr3_4:77807228-77807247 Msa0524320:CDS 35.0%
TCTTCAACAATGCCAAAGTT+TGG + chr3_4:77807587-77807606 Msa0524320:CDS 35.0%
CTTCAACAATGCCAAAGTTT+GGG + chr3_4:77807588-77807607 Msa0524320:CDS 35.0%
CCATCAATACATTCTTAGAG+CGG + chr3_4:77807769-77807788 Msa0524320:CDS 35.0%
TCTAAAGAAGTGAGTGAAGA+AGG + chr3_4:77806893-77806912 Msa0524320:CDS 35.0%
CTAAAGAAGTGAGTGAAGAA+GGG + chr3_4:77806894-77806913 Msa0524320:CDS 35.0%
! TAAAGTGTCTCTCATAAGAG+CGG + chr3_4:77807228-77807247 Msa0524320:CDS 35.0%
TCTTCAACAATGCCAAAGTT+TGG + chr3_4:77807587-77807606 Msa0524320:CDS 35.0%
CTTCAACAATGCCAAAGTTT+GGG + chr3_4:77807588-77807607 Msa0524320:CDS 35.0%
CCATCAATACATTCTTAGAG+CGG + chr3_4:77807769-77807788 Msa0524320:CDS 35.0%
!!! TTTTTTGTGACCAATGACGG+TGG - chr3_4:77807065-77807084 None:intergenic 40.0%
AAACAAACTGGTCCATGTGA+CGG + chr3_4:77807082-77807101 Msa0524320:CDS 40.0%
ATTAACCCTGCTGTCACATT+CGG + chr3_4:77807190-77807209 Msa0524320:CDS 40.0%
ACACTTTACGAGCCAAGAAA+AGG - chr3_4:77807216-77807235 None:intergenic 40.0%
!! CATAAGAGCGGTGTTATACA+TGG + chr3_4:77807240-77807259 Msa0524320:CDS 40.0%
TACATGGTAGCACAGTGTTT+AGG + chr3_4:77807256-77807275 Msa0524320:CDS 40.0%
CTTGCAACTATACCAATCAC+CGG + chr3_4:77807523-77807542 Msa0524320:CDS 40.0%
TACATGGTCATCCCAAACTT+TGG - chr3_4:77807602-77807621 None:intergenic 40.0%
!! CCGCTCTAAGAATGTATTGA+TGG - chr3_4:77807772-77807791 None:intergenic 40.0%
TCAATACATTCTTAGAGCGG+CGG + chr3_4:77807772-77807791 Msa0524320:CDS 40.0%
!!! TTTTTTGTGACCAATGACGG+TGG - chr3_4:77807065-77807084 None:intergenic 40.0%
AAACAAACTGGTCCATGTGA+CGG + chr3_4:77807082-77807101 Msa0524320:CDS 40.0%
ATTAACCCTGCTGTCACATT+CGG + chr3_4:77807190-77807209 Msa0524320:CDS 40.0%
ACACTTTACGAGCCAAGAAA+AGG - chr3_4:77807216-77807235 None:intergenic 40.0%
!! CATAAGAGCGGTGTTATACA+TGG + chr3_4:77807240-77807259 Msa0524320:CDS 40.0%
TACATGGTAGCACAGTGTTT+AGG + chr3_4:77807256-77807275 Msa0524320:CDS 40.0%
CTTGCAACTATACCAATCAC+CGG + chr3_4:77807523-77807542 Msa0524320:CDS 40.0%
TACATGGTCATCCCAAACTT+TGG - chr3_4:77807602-77807621 None:intergenic 40.0%
!! CCGCTCTAAGAATGTATTGA+TGG - chr3_4:77807772-77807791 None:intergenic 40.0%
TCAATACATTCTTAGAGCGG+CGG + chr3_4:77807772-77807791 Msa0524320:CDS 40.0%
AATCTCAGCGAAGTCAAGGA+GGG - chr3_4:77806969-77806988 None:intergenic 45.0%
TAATCTCAGCGAAGTCAAGG+AGG - chr3_4:77806970-77806989 None:intergenic 45.0%
GCTTAATCTCAGCGAAGTCA+AGG - chr3_4:77806973-77806992 None:intergenic 45.0%
ACTTCGCTGAGATTAAGCTC+TGG + chr3_4:77806975-77806994 Msa0524320:CDS 45.0%
AGTGACGTAGAGAAAGAGGA+GGG - chr3_4:77807038-77807057 None:intergenic 45.0%
GACAAAGATCATGCCACCAA+AGG - chr3_4:77807134-77807153 None:intergenic 45.0%
ATGTGACAGCAGGGTTAATG+TGG - chr3_4:77807189-77807208 None:intergenic 45.0%
! TGTCACATTCGGCCTTTTCT+TGG + chr3_4:77807201-77807220 Msa0524320:CDS 45.0%
! CAGTGTTTAGGTGCTATCTG+TGG + chr3_4:77807268-77807287 Msa0524320:CDS 45.0%
AAACACCCTTACAACCACCT+CGG + chr3_4:77807316-77807335 Msa0524320:CDS 45.0%
! TCCGATAATTTCAGCACCGA+GGG - chr3_4:77807386-77807405 None:intergenic 45.0%
TTCCGATAATTTCAGCACCG+AGG - chr3_4:77807387-77807406 None:intergenic 45.0%
ACAGCAAAACCAATGGGCAA+AGG - chr3_4:77807490-77807509 None:intergenic 45.0%
CGGTGATTGGTATAGTTGCA+AGG - chr3_4:77807525-77807544 None:intergenic 45.0%
ACTATACCAATCACCGGTAC+CGG + chr3_4:77807529-77807548 Msa0524320:CDS 45.0%
TATGCATGCAGTGGATCTTC+TGG + chr3_4:77807708-77807727 Msa0524320:intron 45.0%
ATGCATGCAGTGGATCTTCT+GGG + chr3_4:77807709-77807728 Msa0524320:intron 45.0%
TGAAAGGTCAGAACAAGCAC+AGG - chr3_4:77808025-77808044 None:intergenic 45.0%
AATCTCAGCGAAGTCAAGGA+GGG - chr3_4:77806969-77806988 None:intergenic 45.0%
TAATCTCAGCGAAGTCAAGG+AGG - chr3_4:77806970-77806989 None:intergenic 45.0%
GCTTAATCTCAGCGAAGTCA+AGG - chr3_4:77806973-77806992 None:intergenic 45.0%
ACTTCGCTGAGATTAAGCTC+TGG + chr3_4:77806975-77806994 Msa0524320:CDS 45.0%
AGTGACGTAGAGAAAGAGGA+GGG - chr3_4:77807038-77807057 None:intergenic 45.0%
GACAAAGATCATGCCACCAA+AGG - chr3_4:77807134-77807153 None:intergenic 45.0%
ATGTGACAGCAGGGTTAATG+TGG - chr3_4:77807189-77807208 None:intergenic 45.0%
! TGTCACATTCGGCCTTTTCT+TGG + chr3_4:77807201-77807220 Msa0524320:CDS 45.0%
! CAGTGTTTAGGTGCTATCTG+TGG + chr3_4:77807268-77807287 Msa0524320:CDS 45.0%
AAACACCCTTACAACCACCT+CGG + chr3_4:77807316-77807335 Msa0524320:CDS 45.0%
! TCCGATAATTTCAGCACCGA+GGG - chr3_4:77807386-77807405 None:intergenic 45.0%
TTCCGATAATTTCAGCACCG+AGG - chr3_4:77807387-77807406 None:intergenic 45.0%
ACAGCAAAACCAATGGGCAA+AGG - chr3_4:77807490-77807509 None:intergenic 45.0%
CGGTGATTGGTATAGTTGCA+AGG - chr3_4:77807525-77807544 None:intergenic 45.0%
ACTATACCAATCACCGGTAC+CGG + chr3_4:77807529-77807548 Msa0524320:CDS 45.0%
TATGCATGCAGTGGATCTTC+TGG + chr3_4:77807708-77807727 Msa0524320:intron 45.0%
ATGCATGCAGTGGATCTTCT+GGG + chr3_4:77807709-77807728 Msa0524320:intron 45.0%
TGAAAGGTCAGAACAAGCAC+AGG - chr3_4:77808025-77808044 None:intergenic 45.0%
TAGTCCTTACCGTGAGGATG+TGG - chr3_4:77806926-77806945 None:intergenic 50.0%
TCTACGTAGTCCTTACCGTG+AGG - chr3_4:77806932-77806951 None:intergenic 50.0%
ATCTCAGCGAAGTCAAGGAG+GGG - chr3_4:77806968-77806987 None:intergenic 50.0%
CAGTGACGTAGAGAAAGAGG+AGG - chr3_4:77807039-77807058 None:intergenic 50.0%
CGACAGTGACGTAGAGAAAG+AGG - chr3_4:77807042-77807061 None:intergenic 50.0%
! TTGGCCTTCTAGGCATAGCA+TGG + chr3_4:77807107-77807126 Msa0524320:CDS 50.0%
AGGACCATGCTATGCCTAGA+AGG - chr3_4:77807114-77807133 None:intergenic 50.0%
CTAGGCATAGCATGGTCCTT+TGG + chr3_4:77807115-77807134 Msa0524320:CDS 50.0%
AAAGGCCGAATGTGACAGCA+GGG - chr3_4:77807198-77807217 None:intergenic 50.0%
AAAAGGCCGAATGTGACAGC+AGG - chr3_4:77807199-77807218 None:intergenic 50.0%
! TTAGGTGCTATCTGTGGCGT+TGG + chr3_4:77807274-77807293 Msa0524320:CDS 50.0%
! TAGGTGCTATCTGTGGCGTT+GGG + chr3_4:77807275-77807294 Msa0524320:CDS 50.0%
GGTGCTAACTCTGTAGCTTC+CGG + chr3_4:77807343-77807362 Msa0524320:CDS 50.0%
GTAGCTTCCGGTTACAGCAA+AGG + chr3_4:77807355-77807374 Msa0524320:CDS 50.0%
!! GCCCTCGGTGCTGAAATTAT+CGG + chr3_4:77807382-77807401 Msa0524320:CDS 50.0%
! GGACTCACATGTCCCTGTTT+TGG + chr3_4:77807462-77807481 Msa0524320:CDS 50.0%
TGGGCAAAGGAGCCAAAACA+GGG - chr3_4:77807477-77807496 None:intergenic 50.0%
ATGGGCAAAGGAGCCAAAAC+AGG - chr3_4:77807478-77807497 None:intergenic 50.0%
!!! GTTTTGGCTCCTTTGCCCAT+TGG + chr3_4:77807478-77807497 Msa0524320:CDS 50.0%
!! TTGATTCCGGTACCGGTGAT+TGG - chr3_4:77807538-77807557 None:intergenic 50.0%
ATCAACCCTGCTAGGAGCTT+CGG + chr3_4:77807553-77807572 Msa0524320:CDS 50.0%
ATGCAGTGGATCTTCTGGGT+TGG + chr3_4:77807713-77807732 Msa0524320:intron 50.0%
! GTTGGTGGGGTTGCTTCTAA+AGG - chr3_4:77807816-77807835 None:intergenic 50.0%
TAGTCCTTACCGTGAGGATG+TGG - chr3_4:77806926-77806945 None:intergenic 50.0%
TCTACGTAGTCCTTACCGTG+AGG - chr3_4:77806932-77806951 None:intergenic 50.0%
ATCTCAGCGAAGTCAAGGAG+GGG - chr3_4:77806968-77806987 None:intergenic 50.0%
CAGTGACGTAGAGAAAGAGG+AGG - chr3_4:77807039-77807058 None:intergenic 50.0%
CGACAGTGACGTAGAGAAAG+AGG - chr3_4:77807042-77807061 None:intergenic 50.0%
! TTGGCCTTCTAGGCATAGCA+TGG + chr3_4:77807107-77807126 Msa0524320:CDS 50.0%
AGGACCATGCTATGCCTAGA+AGG - chr3_4:77807114-77807133 None:intergenic 50.0%
CTAGGCATAGCATGGTCCTT+TGG + chr3_4:77807115-77807134 Msa0524320:CDS 50.0%
AAAGGCCGAATGTGACAGCA+GGG - chr3_4:77807198-77807217 None:intergenic 50.0%
AAAAGGCCGAATGTGACAGC+AGG - chr3_4:77807199-77807218 None:intergenic 50.0%
! TTAGGTGCTATCTGTGGCGT+TGG + chr3_4:77807274-77807293 Msa0524320:CDS 50.0%
! TAGGTGCTATCTGTGGCGTT+GGG + chr3_4:77807275-77807294 Msa0524320:CDS 50.0%
GGTGCTAACTCTGTAGCTTC+CGG + chr3_4:77807343-77807362 Msa0524320:CDS 50.0%
GTAGCTTCCGGTTACAGCAA+AGG + chr3_4:77807355-77807374 Msa0524320:CDS 50.0%
!! GCCCTCGGTGCTGAAATTAT+CGG + chr3_4:77807382-77807401 Msa0524320:CDS 50.0%
! GGACTCACATGTCCCTGTTT+TGG + chr3_4:77807462-77807481 Msa0524320:CDS 50.0%
TGGGCAAAGGAGCCAAAACA+GGG - chr3_4:77807477-77807496 None:intergenic 50.0%
ATGGGCAAAGGAGCCAAAAC+AGG - chr3_4:77807478-77807497 None:intergenic 50.0%
!!! GTTTTGGCTCCTTTGCCCAT+TGG + chr3_4:77807478-77807497 Msa0524320:CDS 50.0%
!! TTGATTCCGGTACCGGTGAT+TGG - chr3_4:77807538-77807557 None:intergenic 50.0%
ATCAACCCTGCTAGGAGCTT+CGG + chr3_4:77807553-77807572 Msa0524320:CDS 50.0%
ATGCAGTGGATCTTCTGGGT+TGG + chr3_4:77807713-77807732 Msa0524320:intron 50.0%
! GTTGGTGGGGTTGCTTCTAA+AGG - chr3_4:77807816-77807835 None:intergenic 50.0%
CCTTACCGTGAGGATGTGGT+AGG - chr3_4:77806922-77806941 None:intergenic 55.0%
CCTACCACATCCTCACGGTA+AGG + chr3_4:77806919-77806938 Msa0524320:CDS 55.0%
GACGTAGAGAAAGAGGAGGG+TGG - chr3_4:77807035-77807054 None:intergenic 55.0%
ACTGGTCCATGTGACGGTGT+TGG + chr3_4:77807088-77807107 Msa0524320:CDS 55.0%
AGAAGGCCAACACCGTCACA+TGG - chr3_4:77807097-77807116 None:intergenic 55.0%
!! TGTGACGGTGTTGGCCTTCT+AGG + chr3_4:77807097-77807116 Msa0524320:CDS 55.0%
GGCATAGCATGGTCCTTTGG+TGG + chr3_4:77807118-77807137 Msa0524320:CDS 55.0%
TACCAGCGGTGCAGTAGACA+AGG - chr3_4:77807156-77807175 None:intergenic 55.0%
TACTGCACCGCTGGTATCTC+CGG + chr3_4:77807160-77807179 Msa0524320:CDS 55.0%
AGCAGGGTTAATGTGGCCAC+CGG - chr3_4:77807182-77807201 None:intergenic 55.0%
! TGCTATCTGTGGCGTTGGGT+TGG + chr3_4:77807279-77807298 Msa0524320:CDS 55.0%
! GGCAGAGCCTTTGCTGTAAC+CGG - chr3_4:77807365-77807384 None:intergenic 55.0%
TACAGCAAAGGCTCTGCCCT+CGG + chr3_4:77807367-77807386 Msa0524320:CDS 55.0%
! CTGACCCTAAGAGAAGCGCA+CGG + chr3_4:77807440-77807459 Msa0524320:CDS 55.0%
! TGACCCTAAGAGAAGCGCAC+GGG + chr3_4:77807441-77807460 Msa0524320:CDS 55.0%
AGTCCCGTGCGCTTCTCTTA+GGG - chr3_4:77807447-77807466 None:intergenic 55.0%
! AGCAGGGTTGATTCCGGTAC+CGG - chr3_4:77807545-77807564 None:intergenic 55.0%
GTACCGGAATCAACCCTGCT+AGG + chr3_4:77807545-77807564 Msa0524320:CDS 55.0%
! GCTCCTAGCAGGGTTGATTC+CGG - chr3_4:77807551-77807570 None:intergenic 55.0%
! GATCTTCTGGGTTGGACCGT+TGG + chr3_4:77807721-77807740 Msa0524320:CDS 55.0%
! TTCTGGGTTGGACCGTTGGT+GGG + chr3_4:77807725-77807744 Msa0524320:CDS 55.0%
TCTTAGAGCGGCGGCTATCA+AGG + chr3_4:77807781-77807800 Msa0524320:CDS 55.0%
CCTTACCGTGAGGATGTGGT+AGG - chr3_4:77806922-77806941 None:intergenic 55.0%
CCTACCACATCCTCACGGTA+AGG + chr3_4:77806919-77806938 Msa0524320:CDS 55.0%
GACGTAGAGAAAGAGGAGGG+TGG - chr3_4:77807035-77807054 None:intergenic 55.0%
ACTGGTCCATGTGACGGTGT+TGG + chr3_4:77807088-77807107 Msa0524320:CDS 55.0%
AGAAGGCCAACACCGTCACA+TGG - chr3_4:77807097-77807116 None:intergenic 55.0%
!! TGTGACGGTGTTGGCCTTCT+AGG + chr3_4:77807097-77807116 Msa0524320:CDS 55.0%
GGCATAGCATGGTCCTTTGG+TGG + chr3_4:77807118-77807137 Msa0524320:CDS 55.0%
TACCAGCGGTGCAGTAGACA+AGG - chr3_4:77807156-77807175 None:intergenic 55.0%
TACTGCACCGCTGGTATCTC+CGG + chr3_4:77807160-77807179 Msa0524320:CDS 55.0%
AGCAGGGTTAATGTGGCCAC+CGG - chr3_4:77807182-77807201 None:intergenic 55.0%
! TGCTATCTGTGGCGTTGGGT+TGG + chr3_4:77807279-77807298 Msa0524320:CDS 55.0%
! GGCAGAGCCTTTGCTGTAAC+CGG - chr3_4:77807365-77807384 None:intergenic 55.0%
TACAGCAAAGGCTCTGCCCT+CGG + chr3_4:77807367-77807386 Msa0524320:CDS 55.0%
! CTGACCCTAAGAGAAGCGCA+CGG + chr3_4:77807440-77807459 Msa0524320:CDS 55.0%
! TGACCCTAAGAGAAGCGCAC+GGG + chr3_4:77807441-77807460 Msa0524320:CDS 55.0%
AGTCCCGTGCGCTTCTCTTA+GGG - chr3_4:77807447-77807466 None:intergenic 55.0%
! AGCAGGGTTGATTCCGGTAC+CGG - chr3_4:77807545-77807564 None:intergenic 55.0%
GTACCGGAATCAACCCTGCT+AGG + chr3_4:77807545-77807564 Msa0524320:CDS 55.0%
! GCTCCTAGCAGGGTTGATTC+CGG - chr3_4:77807551-77807570 None:intergenic 55.0%
! GATCTTCTGGGTTGGACCGT+TGG + chr3_4:77807721-77807740 Msa0524320:CDS 55.0%
! TTCTGGGTTGGACCGTTGGT+GGG + chr3_4:77807725-77807744 Msa0524320:CDS 55.0%
TCTTAGAGCGGCGGCTATCA+AGG + chr3_4:77807781-77807800 Msa0524320:CDS 55.0%
GGGCACCTACCACATCCTCA+CGG + chr3_4:77806914-77806933 Msa0524320:CDS 60.0%
!! AAGTCAAGGAGGGGTGCTGG+TGG - chr3_4:77806959-77806978 None:intergenic 60.0%
GTCACTGTCGCCACCGTCAT+TGG + chr3_4:77807052-77807071 Msa0524320:CDS 60.0%
GTCCTTGTCTACTGCACCGC+TGG + chr3_4:77807151-77807170 Msa0524320:CDS 60.0%
!! CTGTGGCGTTGGGTTGGTGA+AGG + chr3_4:77807285-77807304 Msa0524320:CDS 60.0%
CACCCTTACAACCACCTCGG+CGG + chr3_4:77807319-77807338 Msa0524320:CDS 60.0%
GAGTCCCGTGCGCTTCTCTT+AGG - chr3_4:77807448-77807467 None:intergenic 60.0%
! CAGCACCGAAGCTCCTAGCA+GGG - chr3_4:77807561-77807580 None:intergenic 60.0%
! CTTCTGGGTTGGACCGTTGG+TGG + chr3_4:77807724-77807743 Msa0524320:CDS 60.0%
GGGCACCTACCACATCCTCA+CGG + chr3_4:77806914-77806933 Msa0524320:CDS 60.0%
!! AAGTCAAGGAGGGGTGCTGG+TGG - chr3_4:77806959-77806978 None:intergenic 60.0%
GTCACTGTCGCCACCGTCAT+TGG + chr3_4:77807052-77807071 Msa0524320:CDS 60.0%
GTCCTTGTCTACTGCACCGC+TGG + chr3_4:77807151-77807170 Msa0524320:CDS 60.0%
!! CTGTGGCGTTGGGTTGGTGA+AGG + chr3_4:77807285-77807304 Msa0524320:CDS 60.0%
CACCCTTACAACCACCTCGG+CGG + chr3_4:77807319-77807338 Msa0524320:CDS 60.0%
GAGTCCCGTGCGCTTCTCTT+AGG - chr3_4:77807448-77807467 None:intergenic 60.0%
! CAGCACCGAAGCTCCTAGCA+GGG - chr3_4:77807561-77807580 None:intergenic 60.0%
! CTTCTGGGTTGGACCGTTGG+TGG + chr3_4:77807724-77807743 Msa0524320:CDS 60.0%
!! CAAGGAGGGGTGCTGGTGGT+GGG - chr3_4:77806955-77806974 None:intergenic 65.0%
!! TCAAGGAGGGGTGCTGGTGG+TGG - chr3_4:77806956-77806975 None:intergenic 65.0%
! GCGAAGTCAAGGAGGGGTGC+TGG - chr3_4:77806962-77806981 None:intergenic 65.0%
TGCACCGCTGGTATCTCCGG+TGG + chr3_4:77807163-77807182 Msa0524320:CDS 65.0%
GTGGCCACCGGAGATACCAG+CGG - chr3_4:77807170-77807189 None:intergenic 65.0%
CGCCGCCGAGGTGGTTGTAA+GGG - chr3_4:77807324-77807343 None:intergenic 65.0%
CCTTACAACCACCTCGGCGG+CGG + chr3_4:77807322-77807341 Msa0524320:CDS 65.0%
! GCAGCACCGAAGCTCCTAGC+AGG - chr3_4:77807562-77807581 None:intergenic 65.0%
! TGGACCGTTGGTGGGAGCGT+TGG + chr3_4:77807733-77807752 Msa0524320:CDS 65.0%
GCTGCCAACGCTCCCACCAA+CGG - chr3_4:77807740-77807759 None:intergenic 65.0%
!! GTTGGTGGGAGCGTTGGCAG+CGG + chr3_4:77807739-77807758 Msa0524320:CDS 65.0%
AGCGGCGGCTATCAAGGCGT+TGG + chr3_4:77807787-77807806 Msa0524320:CDS 65.0%
! GCGGCGGCTATCAAGGCGTT+GGG + chr3_4:77807788-77807807 Msa0524320:CDS 65.0%
!! CAAGGAGGGGTGCTGGTGGT+GGG - chr3_4:77806955-77806974 None:intergenic 65.0%
!! TCAAGGAGGGGTGCTGGTGG+TGG - chr3_4:77806956-77806975 None:intergenic 65.0%
! GCGAAGTCAAGGAGGGGTGC+TGG - chr3_4:77806962-77806981 None:intergenic 65.0%
TGCACCGCTGGTATCTCCGG+TGG + chr3_4:77807163-77807182 Msa0524320:CDS 65.0%
GTGGCCACCGGAGATACCAG+CGG - chr3_4:77807170-77807189 None:intergenic 65.0%
CGCCGCCGAGGTGGTTGTAA+GGG - chr3_4:77807324-77807343 None:intergenic 65.0%
CCTTACAACCACCTCGGCGG+CGG + chr3_4:77807322-77807341 Msa0524320:CDS 65.0%
! GCAGCACCGAAGCTCCTAGC+AGG - chr3_4:77807562-77807581 None:intergenic 65.0%
! TGGACCGTTGGTGGGAGCGT+TGG + chr3_4:77807733-77807752 Msa0524320:CDS 65.0%
GCTGCCAACGCTCCCACCAA+CGG - chr3_4:77807740-77807759 None:intergenic 65.0%
!! GTTGGTGGGAGCGTTGGCAG+CGG + chr3_4:77807739-77807758 Msa0524320:CDS 65.0%
AGCGGCGGCTATCAAGGCGT+TGG + chr3_4:77807787-77807806 Msa0524320:CDS 65.0%
! GCGGCGGCTATCAAGGCGTT+GGG + chr3_4:77807788-77807807 Msa0524320:CDS 65.0%
CCGCCGCCGAGGTGGTTGTA+AGG - chr3_4:77807325-77807344 None:intergenic 70.0%
AGTTAGCACCGCCGCCGAGG+TGG - chr3_4:77807333-77807352 None:intergenic 70.0%
CAGAGTTAGCACCGCCGCCG+AGG - chr3_4:77807336-77807355 None:intergenic 70.0%
CCGCCGCCGAGGTGGTTGTA+AGG - chr3_4:77807325-77807344 None:intergenic 70.0%
AGTTAGCACCGCCGCCGAGG+TGG - chr3_4:77807333-77807352 None:intergenic 70.0%
CAGAGTTAGCACCGCCGCCG+AGG - chr3_4:77807336-77807355 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 77806849 77808076 77806849 ID=Msa0524320;Name=Msa0524320
chr3_4 mRNA 77806849 77808076 77806849 ID=Msa0524320-mRNA-1;Parent=Msa0524320;Name=Msa0524320-mRNA-1;_AED=0.18;_eAED=0.18;_QI=41|1|1|1|1|1|2|238|282
chr3_4 exon 77806849 77807618 77806849 ID=Msa0524320-mRNA-1:exon:22856;Parent=Msa0524320-mRNA-1
chr3_4 exon 77807719 77808076 77807719 ID=Msa0524320-mRNA-1:exon:22857;Parent=Msa0524320-mRNA-1
chr3_4 five_prime_UTR 77806849 77806889 77806849 ID=Msa0524320-mRNA-1:five_prime_utr;Parent=Msa0524320-mRNA-1
chr3_4 CDS 77806890 77807618 77806890 ID=Msa0524320-mRNA-1:cds;Parent=Msa0524320-mRNA-1
chr3_4 CDS 77807719 77807838 77807719 ID=Msa0524320-mRNA-1:cds;Parent=Msa0524320-mRNA-1
chr3_4 three_prime_UTR 77807839 77808076 77807839 ID=Msa0524320-mRNA-1:three_prime_utr;Parent=Msa0524320-mRNA-1
Gene Sequence

>Msa0524320

ATGTCTAAAGAAGTGAGTGAAGAAGGGCACCTACCACATCCTCACGGTAAGGACTACGTAGACCCACCACCAGCACCCCTCCTTGACTTCGCTGAGATTAAGCTCTGGTCTTTCTACAGAGCTCTCATCGCTGAGTTCATAGCCACCCTCCTCTTTCTCTACGTCACTGTCGCCACCGTCATTGGTCACAAAAAACAAACTGGTCCATGTGACGGTGTTGGCCTTCTAGGCATAGCATGGTCCTTTGGTGGCATGATCTTTGTCCTTGTCTACTGCACCGCTGGTATCTCCGGTGGCCACATTAACCCTGCTGTCACATTCGGCCTTTTCTTGGCTCGTAAAGTGTCTCTCATAAGAGCGGTGTTATACATGGTAGCACAGTGTTTAGGTGCTATCTGTGGCGTTGGGTTGGTGAAGGCTTTCATGAAACACCCTTACAACCACCTCGGCGGCGGTGCTAACTCTGTAGCTTCCGGTTACAGCAAAGGCTCTGCCCTCGGTGCTGAAATTATCGGAACTTTTGTGTTGGTTTACACTGTTTTCTCTGCTACTGACCCTAAGAGAAGCGCACGGGACTCACATGTCCCTGTTTTGGCTCCTTTGCCCATTGGTTTTGCTGTTTTTATGGTTCACCTTGCAACTATACCAATCACCGGTACCGGAATCAACCCTGCTAGGAGCTTCGGTGCTGCTGTCATCTTCAACAATGCCAAAGTTTGGGATGACCATTGGATCTTCTGGGTTGGACCGTTGGTGGGAGCGTTGGCAGCGGCTGCATACCATCAATACATTCTTAGAGCGGCGGCTATCAAGGCGTTGGGCTCCTTTAGAAGCAACCCCACCAACTAA
Protein sequence

>Msa0524320

MSKEVSEEGHLPHPHGKDYVDPPPAPLLDFAEIKLWSFYRALIAEFIATLLFLYVTVATVIGHKKQTGPCDGVGLLGIAWSFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAICGVGLVKAFMKHPYNHLGGGANSVASGYSKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNNAKVWDDHWIFWVGPLVGALAAAAYHQYILRAAAIKALGSFRSNPTN*