AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0438000

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0438000 MtrunA17_Chr7g0263971 98.560 486 6 1 1 485 1 486 0.0 970
Msa0438000 MtrunA17_Chr4g0040501 47.000 100 47 2 369 462 4 103 9.65e-21 93.6
Msa0438000 MtrunA17_Chr2g0324921 44.545 110 51 2 369 468 4 113 1.37e-20 92.8
Msa0438000 MtrunA17_Chr2g0282761 50.000 96 46 2 369 462 4 99 1.41e-20 92.8
Msa0438000 MtrunA17_Chr2g0282741 47.917 96 49 1 369 463 4 99 4.22e-20 91.3
Msa0438000 MtrunA17_Chr4g0006391 55.385 65 29 0 369 433 4 68 7.87e-19 87.8
Msa0438000 MtrunA17_Chr3g0138471 53.846 65 30 0 369 433 4 68 1.76e-18 86.3
Msa0438000 MtrunA17_Chr8g0334811 54.651 86 32 3 370 453 15 95 3.03e-17 84.0
Msa0438000 MtrunA17_Chr6g0478651 53.571 84 34 2 368 451 67 145 4.76e-17 84.0
Msa0438000 MtrunA17_Chr8g0344721 48.276 87 37 2 365 443 6 92 8.78e-17 79.7
Msa0438000 MtrunA17_Chr5g0427221 52.174 69 32 1 364 432 43 110 3.20e-16 75.9
Msa0438000 MtrunA17_Chr7g0269841 62.121 66 24 1 368 433 25 89 4.09e-16 79.7
Msa0438000 MtrunA17_Chr2g0333221 51.724 87 38 3 369 453 70 154 9.25e-16 79.7
Msa0438000 MtrunA17_Chr3g0087741 59.091 66 26 1 368 433 88 152 1.94e-15 78.6
Msa0438000 MtrunA17_Chr3g0123861 55.385 65 27 1 369 433 82 144 7.35e-15 76.6
Msa0438000 MtrunA17_Chr4g0021141 50.000 78 38 1 355 432 8 84 9.20e-15 71.2
Msa0438000 MtrunA17_Chr7g0271891 50.000 68 31 1 370 434 17 84 1.42e-14 71.6
Msa0438000 MtrunA17_Chr7g0257081 24.194 496 278 13 38 448 696 1178 3.21e-14 75.5
Msa0438000 MtrunA17_Chr5g0415731 40.000 85 44 1 369 446 5 89 6.86e-14 68.9
Msa0438000 MtrunA17_Chr1g0209551 51.515 66 31 1 367 432 14 78 7.24e-14 73.6
Msa0438000 MtrunA17_Chr4g0010781 54.545 66 29 1 368 433 85 149 1.88e-13 72.4
Msa0438000 MtrunA17_Chr7g0242951 52.941 68 30 1 365 432 23 88 1.09e-12 70.1
Msa0438000 MtrunA17_Chr6g0460381 47.059 68 32 1 369 432 3 70 9.91e-12 64.3
Msa0438000 MtrunA17_Chr2g0295821 40.909 88 50 1 363 450 98 183 1.05e-11 66.2
Msa0438000 MtrunA17_Chr3g0093111 44.444 81 41 2 369 448 2 79 1.56e-11 65.5
Msa0438000 MtrunA17_Chr5g0414471 46.970 66 34 1 367 432 23 87 1.58e-11 66.2
Msa0438000 MtrunA17_Chr4g0044331 50.000 62 28 1 376 434 19 80 2.82e-11 61.6
Msa0438000 MtrunA17_Chr2g0328581 46.154 65 33 1 371 435 77 139 6.35e-11 62.0
Msa0438000 MtrunA17_Chr3g0132971 33.088 136 81 4 318 445 11 144 8.74e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0438000 AT5G03160.1 73.094 446 113 3 12 453 10 452 0.0 599
Msa0438000 AT5G25530.2 45.690 116 54 4 369 475 4 119 1.04e-21 96.7
Msa0438000 AT2G20560.1 45.455 99 45 2 369 466 4 94 1.48e-19 90.1
Msa0438000 AT5G01390.3 55.385 65 29 0 369 433 4 68 3.09e-19 87.4
Msa0438000 AT5G25530.1 42.742 124 54 5 369 475 4 127 3.55e-19 89.4
Msa0438000 AT5G01390.4 55.385 65 29 0 369 433 4 68 3.96e-19 87.0
Msa0438000 AT5G01390.2 55.385 65 29 0 369 433 4 68 5.59e-19 87.4
Msa0438000 AT4G28480.2 41.748 103 49 2 369 463 4 103 6.29e-19 87.4
Msa0438000 AT4G28480.1 41.748 103 49 2 369 463 4 103 8.41e-19 88.2
Msa0438000 AT3G08910.1 53.846 65 30 0 369 433 4 68 1.05e-18 87.4
Msa0438000 AT5G01390.1 55.385 65 29 0 369 433 4 68 1.29e-18 87.4
Msa0438000 AT1G80030.2 51.376 109 43 5 369 475 75 175 2.95e-17 84.7
Msa0438000 AT1G80030.3 51.376 109 43 5 369 475 75 175 2.95e-17 84.7
Msa0438000 AT1G80030.1 51.376 109 43 5 369 475 75 175 2.95e-17 84.7
Msa0438000 AT1G80030.4 51.402 107 41 5 369 470 75 175 3.07e-17 84.7
Msa0438000 AT2G22360.1 52.326 86 38 2 369 453 86 169 3.50e-17 84.3
Msa0438000 AT4G39960.1 51.163 86 39 2 369 453 85 168 5.40e-17 83.6
Msa0438000 AT4G39960.2 51.163 86 39 2 369 453 85 168 5.40e-17 83.6
Msa0438000 AT1G10350.1 47.692 65 34 0 369 433 4 68 7.93e-17 82.4
Msa0438000 AT1G59725.1 51.429 70 32 2 369 436 4 73 2.10e-16 80.9
Msa0438000 AT3G47940.1 53.333 75 33 2 369 441 4 78 5.29e-16 79.7
Msa0438000 AT1G56300.2 49.296 71 33 1 367 434 11 81 4.76e-15 72.0
Msa0438000 AT1G56300.1 49.296 71 33 1 367 434 11 81 7.21e-15 72.4
Msa0438000 AT3G62600.1 59.091 66 26 1 368 433 25 89 1.53e-14 75.5
Msa0438000 AT5G48030.1 50.633 79 36 2 368 444 93 170 2.41e-14 75.5
Msa0438000 AT3G17830.1 41.000 100 48 3 360 453 54 148 3.68e-14 75.1
Msa0438000 AT1G68370.1 46.250 80 40 2 365 442 13 91 1.81e-13 72.4
Msa0438000 AT1G72416.3 38.554 83 46 2 366 443 2 84 2.84e-13 68.9
Msa0438000 AT3G14200.1 42.105 95 46 3 356 443 1 93 3.13e-13 69.7
Msa0438000 AT1G71000.2 47.561 82 38 2 367 445 6 85 3.77e-13 67.8
Msa0438000 AT1G71000.1 47.561 82 38 2 367 445 6 85 4.63e-13 67.8
Msa0438000 AT2G41000.2 34.409 93 55 2 369 457 3 93 5.84e-13 68.6
Msa0438000 AT1G72416.1 38.554 83 46 2 366 443 2 84 1.31e-12 67.0
Msa0438000 AT1G72416.4 38.554 83 46 2 366 443 2 84 1.40e-12 66.6
Msa0438000 AT1G72416.2 38.554 83 46 2 366 443 2 84 1.73e-12 66.6
Msa0438000 AT3G57340.1 29.319 191 106 7 285 450 12 198 2.84e-12 68.6
Msa0438000 AT3G57340.2 29.319 191 106 7 285 450 12 198 2.84e-12 68.6
Msa0438000 AT2G41000.1 34.409 93 55 2 369 457 3 93 3.97e-12 65.5
Msa0438000 AT5G16650.2 51.471 68 32 1 365 432 7 73 5.08e-12 64.7
Msa0438000 AT5G12430.1 25.105 239 141 4 240 440 876 1114 7.28e-12 68.6
Msa0438000 AT2G41520.1 27.650 217 119 5 262 440 851 1067 7.63e-12 68.6
Msa0438000 AT2G33735.1 46.970 66 34 1 368 433 21 85 9.66e-12 62.4
Msa0438000 AT2G33735.2 46.970 66 34 1 368 433 21 85 9.66e-12 62.4
Msa0438000 AT1G59980.2 42.683 82 37 2 366 438 20 100 9.91e-12 67.0
Msa0438000 AT5G16650.1 51.471 68 32 1 365 432 7 73 1.15e-11 62.4
Msa0438000 AT2G41520.3 28.037 214 116 5 262 437 751 964 1.48e-11 67.4
Msa0438000 AT1G59980.1 42.683 82 37 2 366 438 20 100 2.18e-11 66.2
Msa0438000 AT5G05750.1 31.206 141 60 5 363 468 108 246 4.13e-11 64.3
Msa0438000 AT5G59610.2 37.895 95 54 3 352 445 55 145 5.68e-11 63.5
Msa0438000 AT3G12170.1 41.250 80 46 1 365 444 7 85 6.80e-11 63.2
Msa0438000 AT2G41520.2 28.889 180 90 5 299 440 857 1036 9.22e-11 65.1
Msa0438000 AT3G12170.2 38.202 89 54 1 365 453 43 130 9.58e-11 63.2
Msa0438000 AT5G06910.1 37.349 83 51 1 371 453 31 112 9.71e-11 63.2

Find 134 sgRNAs with CRISPR-Local

Find 371 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCTCAATGCTTAATCTTAT+TGG 0.076910 3_3:+2012133 Msa0438000:exon
CAAGGATTATTACAAGATTT+TGG 0.134713 3_3:+2016284 Msa0438000:CDS
AACCACCGCATAAAACTTTA+TGG 0.174264 3_3:-2017107 None:intergenic
CAACCCTTTGTTTCTGCTTC+AGG 0.202001 3_3:+2012253 Msa0438000:CDS
AAAGCATCTCGAAGTATAAA+AGG 0.221656 3_3:+2013784 Msa0438000:CDS
CTATGGATTCGGTGCCTTAC+AGG 0.256750 3_3:+2012170 Msa0438000:CDS
GGAATGGGTGGCGGCGGCGG+TGG 0.261593 3_3:+2016731 Msa0438000:CDS
TTCCCTGGTGGAGGCTTTCC+CGG 0.267174 3_3:+2016812 Msa0438000:CDS
AGCCAACTTCACAAAATCTT+TGG 0.269965 3_3:+2014541 Msa0438000:CDS
GATCTAGGCGAAGACCTTTC+TGG 0.287530 3_3:-2015031 None:intergenic
TGGTTTCTCGTTGTTAACTA+TGG 0.317442 3_3:+2012153 Msa0438000:CDS
ATGGGTGGCGGCGGCGGTGG+AGG 0.326629 3_3:+2016734 Msa0438000:CDS
ACTTATTGATGCTCTTGTTC+AGG 0.335775 3_3:+2015418 Msa0438000:CDS
CACCCATTCCTGATTCTTCA+AGG 0.347393 3_3:-2016718 None:intergenic
CTCGTTGTTAACTATGGATT+CGG 0.359454 3_3:+2012159 Msa0438000:CDS
GGCTTTCCCGGTGGCGGCGG+CGG 0.366054 3_3:+2016824 Msa0438000:CDS
ACAAATAGTGTAATGGTTGC+TGG 0.371153 3_3:-2017157 None:intergenic
TCAGGAATGGGTGGCGGCGG+CGG 0.371929 3_3:+2016728 Msa0438000:CDS
CGTACGCAGCAGCAATTTCT+CGG 0.387049 3_3:-2016419 None:intergenic
GTCTTGTCTTGCAAGCAACT+TGG 0.389769 3_3:-2016996 None:intergenic
CTTATCCGGGTGCCATTGTA+AGG 0.399906 3_3:-2016361 None:intergenic
TTTCCCGGTGGCGGCGGCGG+TGG 0.402220 3_3:+2016827 Msa0438000:CDS
ACATTATGTGCAAGATGGTC+AGG 0.406282 3_3:-2015299 None:intergenic
GGCTGAAGATAATGCGAGTA+AGG 0.407097 3_3:+2015226 Msa0438000:intron
TCTTGTCTTGCAAGCAACTT+GGG 0.407286 3_3:-2016995 None:intergenic
CTAAACTCTTGACGGAAGAC+TGG 0.409882 3_3:+2015658 Msa0438000:CDS
GTTCACTATGCTCAGGATCT+AGG 0.412241 3_3:-2015046 None:intergenic
AGCTTCACTACAACTGTTCA+AGG 0.413274 3_3:-2015378 None:intergenic
CGGACATTCAATTGCAGAAA+AGG 0.413425 3_3:+2014457 Msa0438000:CDS
GGAAGATGAAAACAATTTAG+AGG 0.413639 3_3:+2014853 Msa0438000:CDS
GCCTGTGTAAAGTGCTAGTC+AGG 0.413773 3_3:+2015336 Msa0438000:CDS
GGGGAGGACCTTGAAGAATC+AGG 0.418433 3_3:+2016710 Msa0438000:CDS
CATAGAGGGACTGAGCTGTT+TGG 0.420825 3_3:-2014514 None:intergenic
GAGGGTGCCATTGCTGAGTC+TGG 0.421230 3_3:+2014818 Msa0438000:CDS
GGGCAAGCTACGGGTGGCAG+TGG 0.421513 3_3:+2015247 Msa0438000:CDS
TCACTTGCTAACGGTTGTTA+AGG 0.425862 3_3:+2016955 Msa0438000:three_prime_UTR
AGGTATGCTTCTGAAAGGTT+TGG 0.434008 3_3:-2013859 None:intergenic
GGAGCTCTCTCAGCTATTGC+AGG 0.434656 3_3:+2014478 Msa0438000:CDS
ACCACCGCATAAAACTTTAT+GGG 0.437102 3_3:-2017106 None:intergenic
TTCAATCCATTCGGTGGTGG+TGG 0.445135 3_3:+2016758 Msa0438000:CDS
CGGATAAGAATGTTGACAAA+AGG 0.448605 3_3:+2016376 Msa0438000:CDS
ACTTGCGAAGAACTGAAGCC+TGG 0.451633 3_3:-2013885 None:intergenic
GCGGTGGTTGATACTTTGTA+AGG 0.452888 3_3:+2017121 Msa0438000:three_prime_UTR
GGAGGCTTTCCCGGTGGCGG+CGG 0.460764 3_3:+2016821 Msa0438000:CDS
CCACCGGGAAAGCCTCCACC+AGG 0.461120 3_3:-2016815 None:intergenic
ATTCTTCAAGGTCCTCCCCT+TGG 0.461750 3_3:-2016706 None:intergenic
GATGGTGGCTTCCCTGGTGG+AGG 0.465504 3_3:+2016803 Msa0438000:CDS
GTCTGAAACAATCCCCTGTA+AGG 0.471459 3_3:-2012184 None:intergenic
TCTTGCAAGCAACTTGGGGA+TGG 0.472326 3_3:-2016990 None:intergenic
GATATCTGATAAAGAGTATG+AGG 0.472530 3_3:+2014799 Msa0438000:CDS
ATGGGGATAGGTGTTAGTTA+AGG 0.473409 3_3:+2017064 Msa0438000:three_prime_UTR
CAGTTCTTCGCAAGTTATGC+AGG 0.476082 3_3:+2013893 Msa0438000:CDS
TATGGATTCGGTGCCTTACA+GGG 0.480574 3_3:+2012171 Msa0438000:CDS
GAATCAGGAATGGGTGGCGG+CGG 0.483700 3_3:+2016725 Msa0438000:CDS
CAAGCTACGGGTGGCAGTGG+AGG 0.484614 3_3:+2015250 Msa0438000:CDS
GTAACCACCGCCGCCGCCAC+CGG 0.485366 3_3:-2016831 None:intergenic
CTGATCATGATGTTGCTACA+AGG 0.485535 3_3:+2014912 Msa0438000:CDS
GGTGGAGGCTTTCCCGGTGG+CGG 0.486071 3_3:+2016818 Msa0438000:CDS
CATAATGTACATCTTCATCT+TGG 0.494888 3_3:+2015314 Msa0438000:CDS
TTCAGAAGCATACCTTTCCC+AGG 0.497787 3_3:+2013867 Msa0438000:CDS
GGTGGCAGTGGAGGAATTCA+AGG 0.501651 3_3:+2015259 Msa0438000:CDS
GGTTGTTAAGGTAAATACTT+AGG 0.502495 3_3:+2016967 Msa0438000:three_prime_UTR
TATGTAAACAAATAGTGTAA+TGG 0.510193 3_3:-2017164 None:intergenic
GGTGGAGGTTTCAATCCATT+CGG 0.510505 3_3:+2016749 Msa0438000:CDS
TGAAGTTGGCTGACTCATAG+AGG 0.510931 3_3:-2014529 None:intergenic
GTTGTTACCTTAGTGCATGC+TGG 0.513136 3_3:-2014596 None:intergenic
GGGAGAAGCTAAACTCTTGA+CGG 0.513362 3_3:+2015650 Msa0438000:CDS
ATATTTAGGCATTACCAGAA+AGG 0.522094 3_3:+2015017 Msa0438000:intron
GGTTTCAATCCATTCGGTGG+TGG 0.522209 3_3:+2016755 Msa0438000:CDS
GACCTTGAAGAATCAGGAAT+GGG 0.528456 3_3:+2016716 Msa0438000:CDS
GTGGTCCCTTGAGGAAATCA+AGG 0.531579 3_3:-2016914 None:intergenic
TAACCACCGCCGCCGCCACC+GGG 0.533943 3_3:-2016830 None:intergenic
AGGGTTGAATAATGACAAGT+TGG 0.541100 3_3:-2012237 None:intergenic
AAGCATCTCGAAGTATAAAA+GGG 0.546866 3_3:+2013785 Msa0438000:CDS
GGATAAGAATGTTGACAAAA+GGG 0.547327 3_3:+2016377 Msa0438000:CDS
TTTCTCTCCAGCATGCACTA+AGG 0.557072 3_3:+2014589 Msa0438000:CDS
GGACCTTGAAGAATCAGGAA+TGG 0.557178 3_3:+2016715 Msa0438000:CDS
ATGCGAGTAAGGGCAAGCTA+CGG 0.560599 3_3:+2015237 Msa0438000:CDS
TGCGAGTAAGGGCAAGCTAC+GGG 0.563487 3_3:+2015238 Msa0438000:CDS
TTGCTCTGTGATAAAGTGAT+GGG 0.565017 3_3:+2017046 Msa0438000:three_prime_UTR
TGTAAAGTGCTAGTCAGGCT+TGG 0.567833 3_3:+2015341 Msa0438000:CDS
CTATAGCCTTGATTTCCTCA+AGG 0.568901 3_3:+2016908 Msa0438000:three_prime_UTR
CTTGCGAAGAACTGAAGCCT+GGG 0.570619 3_3:-2013884 None:intergenic
TGCTGTCCACCACCACCGAA+TGG 0.571837 3_3:-2016764 None:intergenic
TTTAAAGATCAGCAAACGCA+AGG 0.572466 3_3:+2016266 Msa0438000:CDS
AGAAATTGCTGCTGCGTACG+AGG 0.575269 3_3:+2016422 Msa0438000:CDS
AGGCTAAGCTTCTTAAAGTG+AGG 0.576851 3_3:+2014771 Msa0438000:intron
TATAGCCTTGATTTCCTCAA+GGG 0.579509 3_3:+2016909 Msa0438000:three_prime_UTR
CCACCGCATAAAACTTTATG+GGG 0.582040 3_3:-2017105 None:intergenic
TAAACTCTTGACGGAAGACT+GGG 0.583293 3_3:+2015659 Msa0438000:CDS
GTTGACTAATCACTTGCTAA+CGG 0.585750 3_3:+2016946 Msa0438000:three_prime_UTR
TTTGCTCTGTGATAAAGTGA+TGG 0.587054 3_3:+2017045 Msa0438000:three_prime_UTR
GAAGAATCAGGAATGGGTGG+CGG 0.587103 3_3:+2016722 Msa0438000:CDS
GTGCTAGTCAGGCTTGGCAG+AGG 0.590572 3_3:+2015347 Msa0438000:CDS
TATACCTGAAGCAGAAACAA+AGG 0.591247 3_3:-2012257 None:intergenic
AAGTTTCTGGAGTTAAAACC+CGG 0.592058 3_3:+2014437 Msa0438000:CDS
TTTGATGGTGGCTTCCCTGG+TGG 0.596620 3_3:+2016800 Msa0438000:CDS
GGGATAGGTGTTAGTTAAGG+AGG 0.596798 3_3:+2017067 Msa0438000:three_prime_UTR
ATTAGTCAACATTATAGATG+TGG 0.600096 3_3:-2016933 None:intergenic
ATACCTGAAGCAGAAACAAA+GGG 0.600717 3_3:-2012256 None:intergenic
TGTGATAAAGTGATGGGGAT+AGG 0.605428 3_3:+2017052 Msa0438000:three_prime_UTR
GAAGAACTGAAGCCTGGGAA+AGG 0.605583 3_3:-2013879 None:intergenic
ATTATAGATGTGGTCCCTTG+AGG 0.607468 3_3:-2016923 None:intergenic
GGAGGTTTCAATCCATTCGG+TGG 0.610043 3_3:+2016752 Msa0438000:CDS
CATTATGTGCAAGATGGTCA+GGG 0.612509 3_3:-2015298 None:intergenic
CTTGTCTTGCAAGCAACTTG+GGG 0.613305 3_3:-2016994 None:intergenic
ACAAGAAACTTGCCTTACAA+TGG 0.614939 3_3:+2016349 Msa0438000:CDS
ATATTCGTGAAGCATTAATG+AGG 0.615631 3_3:+2016232 Msa0438000:CDS
GCTGAAGATAATGCGAGTAA+GGG 0.618327 3_3:+2015227 Msa0438000:CDS
CTTGAAGAATCAGGAATGGG+TGG 0.620295 3_3:+2016719 Msa0438000:CDS
GGGAAAGGTATGCTTCTGAA+AGG 0.621313 3_3:-2013864 None:intergenic
TATTCGTGAAGCATTAATGA+GGG 0.627259 3_3:+2016233 Msa0438000:CDS
CCTGGTGGAGGCTTTCCCGG+TGG 0.627865 3_3:+2016815 Msa0438000:CDS
AACGCACAAGATACGACCAA+GGG 0.630643 3_3:+2016690 Msa0438000:CDS
TGACAAAAGGGAAGAAGCAG+AGG 0.631426 3_3:+2016389 Msa0438000:CDS
GCCTGACTAGCACTTTACAC+AGG 0.631954 3_3:-2015337 None:intergenic
ATGGATTCGGTGCCTTACAG+GGG 0.639407 3_3:+2012172 Msa0438000:CDS
GAAGTTGGCTGACTCATAGA+GGG 0.643770 3_3:-2014528 None:intergenic
GATGTACATTATGTGCAAGA+TGG 0.649387 3_3:-2015304 None:intergenic
CTCTTGACGGAAGACTGGGA+GGG 0.651624 3_3:+2015663 Msa0438000:CDS
ACTCTTGACGGAAGACTGGG+AGG 0.654965 3_3:+2015662 Msa0438000:CDS
AAACGCACAAGATACGACCA+AGG 0.660195 3_3:+2016689 Msa0438000:CDS
ACTTGCCTTACAATGGCACC+CGG 0.661475 3_3:+2016356 Msa0438000:CDS
AAGAAAACCAGACTCAGCAA+TGG 0.664979 3_3:-2014825 None:intergenic
CACCGGGAAAGCCTCCACCA+GGG 0.665138 3_3:-2016814 None:intergenic
CACAAGATACGACCAAGGGG+AGG 0.668043 3_3:+2016694 Msa0438000:CDS
GAGTAAGGGCAAGCTACGGG+TGG 0.668740 3_3:+2015241 Msa0438000:CDS
TTAGAGGCATTGTTGTTACG+TGG 0.670478 3_3:+2014869 Msa0438000:CDS
ATATCTGATAAAGAGTATGA+GGG 0.673598 3_3:+2014800 Msa0438000:CDS
TGCTCTGTGATAAAGTGATG+GGG 0.677036 3_3:+2017047 Msa0438000:three_prime_UTR
AAAAGGGAAACATTATACTG+AGG 0.693246 3_3:+2013801 Msa0438000:CDS
TGAAGCTCTTAAGATCGATG+AGG 0.710564 3_3:+2015394 Msa0438000:CDS
ACGCACAAGATACGACCAAG+GGG 0.726879 3_3:+2016691 Msa0438000:CDS
GTAGATATGAGCAATCTGAG+AGG 0.737942 3_3:+2014405 Msa0438000:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAACATTAAATCAAAAT+GGG - chr3_3:2012332-2012351 None:intergenic 10.0%
!! AAATAAACATTAAATCAAAA+TGG - chr3_3:2012333-2012352 None:intergenic 10.0%
!! TAAAGATATGAAATTTAATA+GGG - chr3_3:2012365-2012384 None:intergenic 10.0%
!! TTAAAGATATGAAATTTAAT+AGG - chr3_3:2012366-2012385 None:intergenic 10.0%
!!! AATTTATGTGTTTATTTTAA+AGG + chr3_3:2012469-2012488 Msa0438000:intron 10.0%
!!! ATTTTATAGCTTTTATTTTT+TGG + chr3_3:2012622-2012641 Msa0438000:intron 10.0%
!!! TTTTATAGCTTTTATTTTTT+GGG + chr3_3:2012623-2012642 Msa0438000:intron 10.0%
!!! ATATGATAATGTTAATATTT+TGG + chr3_3:2016169-2016188 Msa0438000:intron 10.0%
!!! GCAAATAATTTTTTTTTTAA+TGG + chr3_3:2016557-2016576 Msa0438000:intron 10.0%
!! ACAAAAAAAAAAAAAATGGT+TGG - chr3_3:2012296-2012315 None:intergenic 15.0%
!! ATAAACATTAAATCAAAATG+GGG - chr3_3:2012331-2012350 None:intergenic 15.0%
!! AAAGATATGAAATTTAATAG+GGG - chr3_3:2012364-2012383 None:intergenic 15.0%
!! CATTTATCATAAAATGAAAA+GGG + chr3_3:2013154-2013173 Msa0438000:intron 15.0%
!! AAATATAATCTAATTCAAAC+AGG + chr3_3:2013542-2013561 Msa0438000:intron 15.0%
!! AAACTAATATCTTAAAGTAT+AGG - chr3_3:2014259-2014278 None:intergenic 15.0%
!! AGGATAATATTAGAAAAAAT+TGG - chr3_3:2014979-2014998 None:intergenic 15.0%
!!! CAAAAAAAAAAATTTTTGCT+AGG - chr3_3:2015522-2015541 None:intergenic 15.0%
!! GTATGATTAAATTAGAATAT+TGG + chr3_3:2015766-2015785 Msa0438000:intron 15.0%
!! AATATTTGCAATAAAACTTT+AGG + chr3_3:2016104-2016123 Msa0438000:intron 15.0%
!!! ATGAATATTTTGTTGAATAA+CGG + chr3_3:2016628-2016647 Msa0438000:intron 15.0%
!!! ATAGAATTTTGAAATCATTG+AGG + chr3_3:2012107-2012126 Msa0438000:five_prime_UTR 20.0%
!!! CAAATTCAGAGTTTATTTTT+GGG - chr3_3:2012746-2012765 None:intergenic 20.0%
!!! ACAAATTCAGAGTTTATTTT+TGG - chr3_3:2012747-2012766 None:intergenic 20.0%
!! TAGTTATAGAATTAGTAAAG+TGG - chr3_3:2012973-2012992 None:intergenic 20.0%
!!! CCTTTTCATTTTATGATAAA+TGG - chr3_3:2013156-2013175 None:intergenic 20.0%
!! CCATTTATCATAAAATGAAA+AGG + chr3_3:2013153-2013172 Msa0438000:intron 20.0%
!! CACTTCTAATAAAAGATATA+TGG - chr3_3:2013288-2013307 None:intergenic 20.0%
!! GGTATATAGTATAGTATATA+AGG + chr3_3:2013413-2013432 Msa0438000:intron 20.0%
!!! ATTTTGCCAAAAGTTTTTAA+GGG - chr3_3:2013488-2013507 None:intergenic 20.0%
!!! AATTTTGCCAAAAGTTTTTA+AGG - chr3_3:2013489-2013508 None:intergenic 20.0%
!! TCTTAAAGTATAGGATTTAT+GGG - chr3_3:2014250-2014269 None:intergenic 20.0%
!! ATCTTAAAGTATAGGATTTA+TGG - chr3_3:2014251-2014270 None:intergenic 20.0%
!! AGGAATAGAAAGTAAATTTA+TGG - chr3_3:2014639-2014658 None:intergenic 20.0%
!! GAAAATAATGCATATAAAGT+TGG - chr3_3:2014748-2014767 None:intergenic 20.0%
!!! TTATATGCATTATTTTCTTC+AGG + chr3_3:2014751-2014770 Msa0438000:intron 20.0%
!! GAAATTTGAACAATATATCA+GGG - chr3_3:2015127-2015146 None:intergenic 20.0%
!! AGAAATTTGAACAATATATC+AGG - chr3_3:2015128-2015147 None:intergenic 20.0%
!!! TTTTTCATCATTCTTTCTTT+TGG + chr3_3:2015167-2015186 Msa0438000:intron 20.0%
!!! TTTTCATCATTCTTTCTTTT+GGG + chr3_3:2015168-2015187 Msa0438000:intron 20.0%
!!! TATTTCTTTGTTTTCCATAA+AGG + chr3_3:2015205-2015224 Msa0438000:intron 20.0%
!!! AAAGTTACAAGTTTTTTTCT+GGG + chr3_3:2015492-2015511 Msa0438000:intron 20.0%
!!! AAAAAAAATTTTTGCTAGGA+GGG - chr3_3:2015518-2015537 None:intergenic 20.0%
!!! AAAAAAAAATTTTTGCTAGG+AGG - chr3_3:2015519-2015538 None:intergenic 20.0%
!! AATTCAATATATATTACCTG+AGG - chr3_3:2015726-2015745 None:intergenic 20.0%
!! AATGCAAGAAATAAATAACA+AGG - chr3_3:2015859-2015878 None:intergenic 20.0%
!! AAAAGAAAAAAAAAACTACC+AGG - chr3_3:2016008-2016027 None:intergenic 20.0%
!! TCAACAAAATATTCATATCT+AGG - chr3_3:2016624-2016643 None:intergenic 20.0%
!!! TGAATATTTTGTTGAATAAC+GGG + chr3_3:2016629-2016648 Msa0438000:intron 20.0%
!!! TTACGAATTTCATTTTTGAT+TGG + chr3_3:2016850-2016869 Msa0438000:exon 20.0%
!!! TTGATCCTTAAATTTTTCTT+AGG + chr3_3:2016880-2016899 Msa0438000:three_prime_UTR 20.0%
!!! TGATCCTTAAATTTTTCTTA+GGG + chr3_3:2016881-2016900 Msa0438000:three_prime_UTR 20.0%
!! TATGTAAACAAATAGTGTAA+TGG - chr3_3:2017167-2017186 None:intergenic 20.0%
! ATCTCAATGCTTAATCTTAT+TGG + chr3_3:2012133-2012152 Msa0438000:exon 25.0%
! ACAACACAAATAAAAACCTA+AGG - chr3_3:2012448-2012467 None:intergenic 25.0%
! TGTAGTTTGAATTTGAACAT+TGG + chr3_3:2012660-2012679 Msa0438000:intron 25.0%
! TTTCTATATACCATTCAAAC+AGG - chr3_3:2012713-2012732 None:intergenic 25.0%
! AATGGTATATAGAAAGAGTT+AGG + chr3_3:2012718-2012737 Msa0438000:intron 25.0%
! TAAACCATAGCATAAAACAA+CGG - chr3_3:2013091-2013110 None:intergenic 25.0%
! TATCAACGAAATACAGTATT+TGG - chr3_3:2013209-2013228 None:intergenic 25.0%
! AAATACTGTATTTCGTTGAT+AGG + chr3_3:2013208-2013227 Msa0438000:intron 25.0%
! TATAGTGCAATTAACAAACT+TGG - chr3_3:2013389-2013408 None:intergenic 25.0%
! TTGTTAATTGCACTATATTG+TGG + chr3_3:2013392-2013411 Msa0438000:intron 25.0%
!! TAGTATATAAGGTCTTGTAT+TGG + chr3_3:2013424-2013443 Msa0438000:intron 25.0%
!!! TTTTGCCAAAAGTTTTTAAG+GGG - chr3_3:2013487-2013506 None:intergenic 25.0%
!!! TGGGAGTATTATTTTTTAGT+GGG - chr3_3:2013630-2013649 None:intergenic 25.0%
!!! TTGGGAGTATTATTTTTTAG+TGG - chr3_3:2013631-2013650 None:intergenic 25.0%
! AAGTAATAAAGTTAGGACTT+GGG - chr3_3:2013649-2013668 None:intergenic 25.0%
! TCTAGAGAAGTAATAAAGTT+AGG - chr3_3:2013656-2013675 None:intergenic 25.0%
! TTTCCAATTTCTGTTTCATA+AGG + chr3_3:2013999-2014018 Msa0438000:intron 25.0%
! TATCCTTATGAAACAGAAAT+TGG - chr3_3:2014005-2014024 None:intergenic 25.0%
! TTAAAGTATAGGATTTATGG+GGG - chr3_3:2014248-2014267 None:intergenic 25.0%
! CTTAAAGTATAGGATTTATG+GGG - chr3_3:2014249-2014268 None:intergenic 25.0%
! AATGATATCACTATCCAATT+AGG - chr3_3:2014366-2014385 None:intergenic 25.0%
! AGAAAGTAAATTTATGGATG+TGG - chr3_3:2014633-2014652 None:intergenic 25.0%
!! ATATCTGATAAAGAGTATGA+GGG + chr3_3:2014800-2014819 Msa0438000:CDS 25.0%
! AATATTATCCTGCTTATATG+TGG + chr3_3:2014988-2015007 Msa0438000:intron 25.0%
! ATATTATCCTGCTTATATGT+GGG + chr3_3:2014989-2015008 Msa0438000:intron 25.0%
! ATATGTGGGCATATATATTT+AGG + chr3_3:2015003-2015022 Msa0438000:intron 25.0%
!!! CAAAGTTACAAGTTTTTTTC+TGG + chr3_3:2015491-2015510 Msa0438000:intron 25.0%
! TTGCACATAATTACTTATCT+TGG + chr3_3:2015610-2015629 Msa0438000:intron 25.0%
! TATATTAGAAAATACCTGCA+CGG + chr3_3:2016048-2016067 Msa0438000:intron 25.0%
!! CAAGGATTATTACAAGATTT+TGG + chr3_3:2016284-2016303 Msa0438000:CDS 25.0%
!!! CATATAATACCATGCTTTTT+TGG + chr3_3:2016522-2016541 Msa0438000:intron 25.0%
! GAGTTATAATAGGATTCATT+TGG + chr3_3:2016593-2016612 Msa0438000:intron 25.0%
!!! CAATTTCACTTTACTTTTGA+TGG + chr3_3:2016785-2016804 Msa0438000:CDS 25.0%
! ATTAGTCAACATTATAGATG+TGG - chr3_3:2016936-2016955 None:intergenic 25.0%
AAATGGTTGGAAAGAAATGA+AGG - chr3_3:2012283-2012302 None:intergenic 30.0%
!!! TTTGATCCAACTTTGTTTTG+TGG + chr3_3:2012389-2012408 Msa0438000:intron 30.0%
!!! TTGATCCAACTTTGTTTTGT+GGG + chr3_3:2012390-2012409 Msa0438000:intron 30.0%
TGAATTGGTTGGATTTATTG+AGG + chr3_3:2012599-2012618 Msa0438000:intron 30.0%
TTTAGTATGACCTGTTTGAA+TGG + chr3_3:2012700-2012719 Msa0438000:intron 30.0%
!! AGTTTGTTAGCTAAGATAGT+AGG - chr3_3:2012913-2012932 None:intergenic 30.0%
AATCTCATATGATGTCATTG+TGG - chr3_3:2013036-2013055 None:intergenic 30.0%
!! TTTTCCGTTGTTTTATGCTA+TGG + chr3_3:2013084-2013103 Msa0438000:intron 30.0%
! TATTTCGTTGATAGGCATTA+TGG + chr3_3:2013216-2013235 Msa0438000:intron 30.0%
! ATCGCTACAAAGTGAAATTT+TGG + chr3_3:2013336-2013355 Msa0438000:intron 30.0%
!! TGAATAAACTTGCTGTTAAG+AGG - chr3_3:2013513-2013532 None:intergenic 30.0%
GAAGTAATAAAGTTAGGACT+TGG - chr3_3:2013650-2013669 None:intergenic 30.0%
! AAAGCATCTCGAAGTATAAA+AGG + chr3_3:2013784-2013803 Msa0438000:CDS 30.0%
AAGCATCTCGAAGTATAAAA+GGG + chr3_3:2013785-2013804 Msa0438000:CDS 30.0%
AAAAGGGAAACATTATACTG+AGG + chr3_3:2013801-2013820 Msa0438000:CDS 30.0%
TACCAAACTTTCAAAAAGCA+CGG - chr3_3:2013949-2013968 None:intergenic 30.0%
CTAACTTCAATAACGATAAG+GGG - chr3_3:2014078-2014097 None:intergenic 30.0%
GCTAACTTCAATAACGATAA+GGG - chr3_3:2014079-2014098 None:intergenic 30.0%
TGCTAACTTCAATAACGATA+AGG - chr3_3:2014080-2014099 None:intergenic 30.0%
TAAAGTATAGGATTTATGGG+GGG - chr3_3:2014247-2014266 None:intergenic 30.0%
ATTGGATAGTGATATCATTC+AGG + chr3_3:2014367-2014386 Msa0438000:intron 30.0%
! TTCCAAAGATTTTGTGAAGT+TGG - chr3_3:2014546-2014565 None:intergenic 30.0%
ACTTGTGTAACTACTAATAC+AGG - chr3_3:2014659-2014678 None:intergenic 30.0%
AAAGTTAATGCCCAAGTATT+GGG + chr3_3:2014682-2014701 Msa0438000:intron 30.0%
! GATATCTGATAAAGAGTATG+AGG + chr3_3:2014799-2014818 Msa0438000:CDS 30.0%
GGAAGATGAAAACAATTTAG+AGG + chr3_3:2014853-2014872 Msa0438000:CDS 30.0%
ATATTTAGGCATTACCAGAA+AGG + chr3_3:2015017-2015036 Msa0438000:intron 30.0%
! GAACTGAAAAAAGCATACTT+TGG + chr3_3:2015065-2015084 Msa0438000:CDS 30.0%
GAATGATGAAAAACTTGAGA+AGG - chr3_3:2015160-2015179 None:intergenic 30.0%
CATAATGTACATCTTCATCT+TGG + chr3_3:2015314-2015333 Msa0438000:CDS 30.0%
TTCATATAGCATGTTTCACA+CGG + chr3_3:2015744-2015763 Msa0438000:intron 30.0%
TGCATTTGTGTGTTTATTAG+AGG + chr3_3:2015873-2015892 Msa0438000:intron 30.0%
TTGTGTGTTTATTAGAGGTT+TGG + chr3_3:2015878-2015897 Msa0438000:intron 30.0%
TAATTCAGAATTGTCTGTTG+TGG + chr3_3:2015902-2015921 Msa0438000:intron 30.0%
! ATATTCGTGAAGCATTAATG+AGG + chr3_3:2016232-2016251 Msa0438000:CDS 30.0%
! TATTCGTGAAGCATTAATGA+GGG + chr3_3:2016233-2016252 Msa0438000:CDS 30.0%
! TTTTGTCAACATTCTTATCC+GGG - chr3_3:2016377-2016396 None:intergenic 30.0%
! CTTTTGTCAACATTCTTATC+CGG - chr3_3:2016378-2016397 None:intergenic 30.0%
GGATAAGAATGTTGACAAAA+GGG + chr3_3:2016377-2016396 Msa0438000:CDS 30.0%
CTGAACAAGGAAAAGAAATA+AGG - chr3_3:2016468-2016487 None:intergenic 30.0%
!! TTTCACTTTACTTTTGATGG+TGG + chr3_3:2016788-2016807 Msa0438000:CDS 30.0%
CTCTCCCTAAGAAAAATTTA+AGG - chr3_3:2016888-2016907 None:intergenic 30.0%
GGTTGTTAAGGTAAATACTT+AGG + chr3_3:2016967-2016986 Msa0438000:three_prime_UTR 30.0%
TGGTTTCTCGTTGTTAACTA+TGG + chr3_3:2012153-2012172 Msa0438000:CDS 35.0%
CTCGTTGTTAACTATGGATT+CGG + chr3_3:2012159-2012178 Msa0438000:CDS 35.0%
AGGGTTGAATAATGACAAGT+TGG - chr3_3:2012240-2012259 None:intergenic 35.0%
ATACCTGAAGCAGAAACAAA+GGG - chr3_3:2012259-2012278 None:intergenic 35.0%
TATACCTGAAGCAGAAACAA+AGG - chr3_3:2012260-2012279 None:intergenic 35.0%
! ATGACAGAACTCTAGTTTCA+AGG + chr3_3:2012809-2012828 Msa0438000:intron 35.0%
TGTTAGCTAAGATAGTAGGA+GGG - chr3_3:2012909-2012928 None:intergenic 35.0%
TTGTTAGCTAAGATAGTAGG+AGG - chr3_3:2012910-2012929 None:intergenic 35.0%
AATCTATTATGCGATACTCC+TGG + chr3_3:2012933-2012952 Msa0438000:intron 35.0%
ATCTATTATGCGATACTCCT+GGG + chr3_3:2012934-2012953 Msa0438000:intron 35.0%
ATTAATGCATTCCAGGAGAT+CGG - chr3_3:2013063-2013082 None:intergenic 35.0%
GGAAAACATTAATGCATTCC+AGG - chr3_3:2013070-2013089 None:intergenic 35.0%
CATAAAATGAAAAGGGCAAG+TGG + chr3_3:2013161-2013180 Msa0438000:intron 35.0%
AAGTGGCATCACATAATAGT+GGG + chr3_3:2013178-2013197 Msa0438000:intron 35.0%
! AGCTTCCCCTTAAAAACTTT+TGG + chr3_3:2013479-2013498 Msa0438000:intron 35.0%
GTGATGATTCAGTGTTAAAG+TGG + chr3_3:2013688-2013707 Msa0438000:intron 35.0%
AGATCAGAACCAAAAAAGAC+TGG - chr3_3:2013728-2013747 None:intergenic 35.0%
!!! AGTCTTTTTTGGTTCTGATC+TGG + chr3_3:2013727-2013746 Msa0438000:intron 35.0%
! ACCAAACTTTCAAAAAGCAC+GGG - chr3_3:2013948-2013967 None:intergenic 35.0%
ATTAGGAGTTTGAGTGACTT+GGG - chr3_3:2014349-2014368 None:intergenic 35.0%
AATTAGGAGTTTGAGTGACT+TGG - chr3_3:2014350-2014369 None:intergenic 35.0%
AAGTCACTCAAACTCCTAAT+TGG + chr3_3:2014349-2014368 Msa0438000:intron 35.0%
! GATATCATTCAGGTGCTTTT+TGG + chr3_3:2014377-2014396 Msa0438000:intron 35.0%
!! AAGTTTCTGGAGTTAAAACC+CGG + chr3_3:2014437-2014456 Msa0438000:CDS 35.0%
! TTTTCTGCAATTGAATGTCC+GGG - chr3_3:2014458-2014477 None:intergenic 35.0%
! CTTTTCTGCAATTGAATGTC+CGG - chr3_3:2014459-2014478 None:intergenic 35.0%
AGCCAACTTCACAAAATCTT+TGG + chr3_3:2014541-2014560 Msa0438000:CDS 35.0%
GAAAGTTAATGCCCAAGTAT+TGG + chr3_3:2014681-2014700 Msa0438000:intron 35.0%
ATATATGCCCACATATAAGC+AGG - chr3_3:2014999-2015018 None:intergenic 35.0%
!! TTTTTCAGTTCACTATGCTC+AGG - chr3_3:2015056-2015075 None:intergenic 35.0%
GATGTACATTATGTGCAAGA+TGG - chr3_3:2015307-2015326 None:intergenic 35.0%
ACTTATTGATGCTCTTGTTC+AGG + chr3_3:2015418-2015437 Msa0438000:CDS 35.0%
CAAATGAAACACAAGACACA+AGG - chr3_3:2015464-2015483 None:intergenic 35.0%
!! GATCTAAGTCTTGTTTGAGT+AGG + chr3_3:2015541-2015560 Msa0438000:intron 35.0%
!! TAAGTCTTGTTTGAGTAGGA+TGG + chr3_3:2015545-2015564 Msa0438000:intron 35.0%
CAAATTCGAAAAGCTTCAAG+GGG - chr3_3:2015958-2015977 None:intergenic 35.0%
GCAAATTCGAAAAGCTTCAA+GGG - chr3_3:2015959-2015978 None:intergenic 35.0%
TAGTAGTTGTCTATAACTGC+AGG + chr3_3:2016203-2016222 Msa0438000:intron 35.0%
TTTAAAGATCAGCAAACGCA+AGG + chr3_3:2016266-2016285 Msa0438000:CDS 35.0%
ACAAGAAACTTGCCTTACAA+TGG + chr3_3:2016349-2016368 Msa0438000:CDS 35.0%
CGGATAAGAATGTTGACAAA+AGG + chr3_3:2016376-2016395 Msa0438000:CDS 35.0%
TCCTTGTTCAGACTTTAATC+AGG + chr3_3:2016477-2016496 Msa0438000:intron 35.0%
TCCTGATTAAAGTCTGAACA+AGG - chr3_3:2016481-2016500 None:intergenic 35.0%
CAAAACTAGCCAAAAAAGCA+TGG - chr3_3:2016534-2016553 None:intergenic 35.0%
!!! CATGCTTTTTTGGCTAGTTT+TGG + chr3_3:2016532-2016551 Msa0438000:intron 35.0%
!! TTTTAATGGACGCTTAACTG+CGG + chr3_3:2016571-2016590 Msa0438000:intron 35.0%
CTTAACTGCGGAGTTATAAT+AGG + chr3_3:2016583-2016602 Msa0438000:intron 35.0%
! TATAGCCTTGATTTCCTCAA+GGG + chr3_3:2016909-2016928 Msa0438000:three_prime_UTR 35.0%
! GTTGACTAATCACTTGCTAA+CGG + chr3_3:2016946-2016965 Msa0438000:three_prime_UTR 35.0%
TTTGCTCTGTGATAAAGTGA+TGG + chr3_3:2017045-2017064 Msa0438000:three_prime_UTR 35.0%
TTGCTCTGTGATAAAGTGAT+GGG + chr3_3:2017046-2017065 Msa0438000:three_prime_UTR 35.0%
!! TAGCCCCATAAAGTTTTATG+CGG + chr3_3:2017102-2017121 Msa0438000:three_prime_UTR 35.0%
ACCACCGCATAAAACTTTAT+GGG - chr3_3:2017109-2017128 None:intergenic 35.0%
AACCACCGCATAAAACTTTA+TGG - chr3_3:2017110-2017129 None:intergenic 35.0%
ACAAATAGTGTAATGGTTGC+TGG - chr3_3:2017160-2017179 None:intergenic 35.0%
ATCGACCCACAAAACAAAGT+TGG - chr3_3:2012398-2012417 None:intergenic 40.0%
! TTTTCATCACTCTCAGCCTT+AGG + chr3_3:2012429-2012448 Msa0438000:intron 40.0%
AGCATGTTGCATGAATTGGT+TGG + chr3_3:2012588-2012607 Msa0438000:intron 40.0%
ACATTGGAAACTAGAGAGAG+AGG + chr3_3:2012676-2012695 Msa0438000:intron 40.0%
CATTGGAAACTAGAGAGAGA+GGG + chr3_3:2012677-2012696 Msa0438000:intron 40.0%
AGCACTAGCTCGTTTGTAAA+GGG - chr3_3:2012843-2012862 None:intergenic 40.0%
AAGCACTAGCTCGTTTGTAA+AGG - chr3_3:2012844-2012863 None:intergenic 40.0%
CTCATATGATGTCATTGTGG+AGG - chr3_3:2013033-2013052 None:intergenic 40.0%
!!! TGAGATTTTTTCCGATCTCC+TGG + chr3_3:2013049-2013068 Msa0438000:intron 40.0%
ACGTATGCAAGATCGACTAA+TGG - chr3_3:2013128-2013147 None:intergenic 40.0%
CAAGTGGCATCACATAATAG+TGG + chr3_3:2013177-2013196 Msa0438000:intron 40.0%
CAGCAAGTTTATTCAGTTCG+TGG + chr3_3:2013518-2013537 Msa0438000:intron 40.0%
CACTGAATCATCACATTCAC+AGG - chr3_3:2013682-2013701 None:intergenic 40.0%
! AGAACCAAAAAAGACTGGTC+AGG - chr3_3:2013723-2013742 None:intergenic 40.0%
!!! CTTTTTTGGTTCTGATCTGG+TGG + chr3_3:2013730-2013749 Msa0438000:intron 40.0%
! AGGTATGCTTCTGAAAGGTT+TGG - chr3_3:2013862-2013881 None:intergenic 40.0%
! CCAAACTTTCAAAAAGCACG+GGG - chr3_3:2013947-2013966 None:intergenic 40.0%
!!! ATTAGTTTTCCTCCTTCGTC+CGG + chr3_3:2014161-2014180 Msa0438000:intron 40.0%
TGAACTAAGGGATAAGGAGT+TGG - chr3_3:2014205-2014224 None:intergenic 40.0%
! CTGGTTTGAACTAAGGGATA+AGG - chr3_3:2014211-2014230 None:intergenic 40.0%
!! GCTGAACTGGTTTGAACTAA+GGG - chr3_3:2014217-2014236 None:intergenic 40.0%
!! AGCTGAACTGGTTTGAACTA+AGG - chr3_3:2014218-2014237 None:intergenic 40.0%
TATAGGATTTATGGGGGGTT+GGG - chr3_3:2014242-2014261 None:intergenic 40.0%
TTAGGAGTTTGAGTGACTTG+GGG - chr3_3:2014348-2014367 None:intergenic 40.0%
GTAGATATGAGCAATCTGAG+AGG + chr3_3:2014405-2014424 Msa0438000:intron 40.0%
GAGGAGCTACAAAAAGTTTC+TGG + chr3_3:2014424-2014443 Msa0438000:CDS 40.0%
CGGACATTCAATTGCAGAAA+AGG + chr3_3:2014457-2014476 Msa0438000:CDS 40.0%
!! TAATGCCCAAGTATTGGGTT+TGG + chr3_3:2014687-2014706 Msa0438000:intron 40.0%
!! AATGCCCAAGTATTGGGTTT+GGG + chr3_3:2014688-2014707 Msa0438000:intron 40.0%
AGGCTAAGCTTCTTAAAGTG+AGG + chr3_3:2014771-2014790 Msa0438000:intron 40.0%
AAGAAAACCAGACTCAGCAA+TGG - chr3_3:2014828-2014847 None:intergenic 40.0%
!!! TGAGTCTGGTTTTCTTCTCA+AGG + chr3_3:2014832-2014851 Msa0438000:CDS 40.0%
!! TTAGAGGCATTGTTGTTACG+TGG + chr3_3:2014869-2014888 Msa0438000:CDS 40.0%
CTGATCATGATGTTGCTACA+AGG + chr3_3:2014912-2014931 Msa0438000:CDS 40.0%
TTGCTACAAGGTTTGTCTTG+TGG + chr3_3:2014924-2014943 Msa0438000:intron 40.0%
CGCATTATCTTCAGCCTTTA+TGG - chr3_3:2015222-2015241 None:intergenic 40.0%
GCTGAAGATAATGCGAGTAA+GGG + chr3_3:2015227-2015246 Msa0438000:CDS 40.0%
CATTATGTGCAAGATGGTCA+GGG - chr3_3:2015301-2015320 None:intergenic 40.0%
ACATTATGTGCAAGATGGTC+AGG - chr3_3:2015302-2015321 None:intergenic 40.0%
AGCTTCACTACAACTGTTCA+AGG - chr3_3:2015381-2015400 None:intergenic 40.0%
TGAAGCTCTTAAGATCGATG+AGG + chr3_3:2015394-2015413 Msa0438000:CDS 40.0%
! TTGGTGTTCCTTGTTGTAGA+GGG + chr3_3:2015629-2015648 Msa0438000:intron 40.0%
TAAACTCTTGACGGAAGACT+GGG + chr3_3:2015659-2015678 Msa0438000:CDS 40.0%
CGCAAATTCGAAAAGCTTCA+AGG - chr3_3:2015960-2015979 None:intergenic 40.0%
! CAGGAGCATGAAATGAAACA+TGG - chr3_3:2015989-2016008 None:intergenic 40.0%
CATGTTTCATTTCATGCTCC+TGG + chr3_3:2015987-2016006 Msa0438000:intron 40.0%
AATGACAATGTTAACCGTGC+AGG - chr3_3:2016065-2016084 None:intergenic 40.0%
GACCTTGAAGAATCAGGAAT+GGG + chr3_3:2016716-2016735 Msa0438000:CDS 40.0%
! CTATAGCCTTGATTTCCTCA+AGG + chr3_3:2016908-2016927 Msa0438000:three_prime_UTR 40.0%
ATTATAGATGTGGTCCCTTG+AGG - chr3_3:2016926-2016945 None:intergenic 40.0%
! TCACTTGCTAACGGTTGTTA+AGG + chr3_3:2016955-2016974 Msa0438000:three_prime_UTR 40.0%
TCTTGTCTTGCAAGCAACTT+GGG - chr3_3:2016998-2017017 None:intergenic 40.0%
TGCTCTGTGATAAAGTGATG+GGG + chr3_3:2017047-2017066 Msa0438000:three_prime_UTR 40.0%
! TGTGATAAAGTGATGGGGAT+AGG + chr3_3:2017052-2017071 Msa0438000:three_prime_UTR 40.0%
ATGGGGATAGGTGTTAGTTA+AGG + chr3_3:2017064-2017083 Msa0438000:three_prime_UTR 40.0%
CCACCGCATAAAACTTTATG+GGG - chr3_3:2017108-2017127 None:intergenic 40.0%
!! TATGGATTCGGTGCCTTACA+GGG + chr3_3:2012171-2012190 Msa0438000:CDS 45.0%
! GTCTGAAACAATCCCCTGTA+AGG - chr3_3:2012187-2012206 None:intergenic 45.0%
!! CAACCCTTTGTTTCTGCTTC+AGG + chr3_3:2012253-2012272 Msa0438000:CDS 45.0%
GTGCAGCATGTTGCATGAAT+TGG + chr3_3:2012584-2012603 Msa0438000:intron 45.0%
GCACTAGCTCGTTTGTAAAG+GGG - chr3_3:2012842-2012861 None:intergenic 45.0%
GACACACAAGGAAATCATGC+AGG - chr3_3:2013011-2013030 None:intergenic 45.0%
! GGTTTGAGTTCATCAGAGAG+AGG + chr3_3:2013237-2013256 Msa0438000:intron 45.0%
TGAGTTCATCAGAGAGAGGA+TGG + chr3_3:2013241-2013260 Msa0438000:intron 45.0%
TTCATCAGAGAGAGGATGGA+GGG + chr3_3:2013245-2013264 Msa0438000:intron 45.0%
! TCTTGTATTGGCGTTGAAGC+TGG + chr3_3:2013436-2013455 Msa0438000:intron 45.0%
!!! GTTGCCTGACCAGTCTTTTT+TGG + chr3_3:2013716-2013735 Msa0438000:intron 45.0%
TTCTGATCTGGTGGAAAACC+AGG + chr3_3:2013739-2013758 Msa0438000:intron 45.0%
AACAACTCAGCTGCATTTCC+TGG - chr3_3:2013760-2013779 None:intergenic 45.0%
! GGGAAAGGTATGCTTCTGAA+AGG - chr3_3:2013867-2013886 None:intergenic 45.0%
! TTCAGAAGCATACCTTTCCC+AGG + chr3_3:2013867-2013886 Msa0438000:CDS 45.0%
CAGTTCTTCGCAAGTTATGC+AGG + chr3_3:2013893-2013912 Msa0438000:CDS 45.0%
! TTTCAAAAAGCACGGGGATG+GGG - chr3_3:2013941-2013960 None:intergenic 45.0%
! CTTTCAAAAAGCACGGGGAT+GGG - chr3_3:2013942-2013961 None:intergenic 45.0%
! ACTTTCAAAAAGCACGGGGA+TGG - chr3_3:2013943-2013962 None:intergenic 45.0%
!! CCCCGTGCTTTTTGAAAGTT+TGG + chr3_3:2013944-2013963 Msa0438000:intron 45.0%
! AAGGGGCAAAATGTTGCTTC+TGG - chr3_3:2014061-2014080 None:intergenic 45.0%
!! TTAGTTTTCCTCCTTCGTCC+GGG + chr3_3:2014162-2014181 Msa0438000:intron 45.0%
ACTAAGGGATAAGGAGTTGG+AGG - chr3_3:2014202-2014221 None:intergenic 45.0%
GTATAGGATTTATGGGGGGT+TGG - chr3_3:2014243-2014262 None:intergenic 45.0%
! GAAGTTGGCTGACTCATAGA+GGG - chr3_3:2014531-2014550 None:intergenic 45.0%
! TGAAGTTGGCTGACTCATAG+AGG - chr3_3:2014532-2014551 None:intergenic 45.0%
TTTCTCTCCAGCATGCACTA+AGG + chr3_3:2014589-2014608 Msa0438000:CDS 45.0%
GTTGTTACCTTAGTGCATGC+TGG - chr3_3:2014599-2014618 None:intergenic 45.0%
ACAGCCCAAACCCAATACTT+GGG - chr3_3:2014695-2014714 None:intergenic 45.0%
GTTCACTATGCTCAGGATCT+AGG - chr3_3:2015049-2015068 None:intergenic 45.0%
GGCTGAAGATAATGCGAGTA+AGG + chr3_3:2015226-2015245 Msa0438000:intron 45.0%
! TGTAAAGTGCTAGTCAGGCT+TGG + chr3_3:2015341-2015360 Msa0438000:CDS 45.0%
!! CTTGGTGTTCCTTGTTGTAG+AGG + chr3_3:2015628-2015647 Msa0438000:intron 45.0%
! TGGTGTTCCTTGTTGTAGAG+GGG + chr3_3:2015630-2015649 Msa0438000:intron 45.0%
GGGAGAAGCTAAACTCTTGA+CGG + chr3_3:2015650-2015669 Msa0438000:CDS 45.0%
CTAAACTCTTGACGGAAGAC+TGG + chr3_3:2015658-2015677 Msa0438000:CDS 45.0%
AGCTGCTCAAAAATCTCCTC+AGG + chr3_3:2015707-2015726 Msa0438000:CDS 45.0%
TGACAAAAGGGAAGAAGCAG+AGG + chr3_3:2016389-2016408 Msa0438000:CDS 45.0%
! GGGTCGTTGCATTGTGTTTT+AGG + chr3_3:2016649-2016668 Msa0438000:intron 45.0%
AAACGCACAAGATACGACCA+AGG + chr3_3:2016689-2016708 Msa0438000:CDS 45.0%
AACGCACAAGATACGACCAA+GGG + chr3_3:2016690-2016709 Msa0438000:CDS 45.0%
GGACCTTGAAGAATCAGGAA+TGG + chr3_3:2016715-2016734 Msa0438000:CDS 45.0%
CACCCATTCCTGATTCTTCA+AGG - chr3_3:2016721-2016740 None:intergenic 45.0%
CTTGAAGAATCAGGAATGGG+TGG + chr3_3:2016719-2016738 Msa0438000:CDS 45.0%
GGTGGAGGTTTCAATCCATT+CGG + chr3_3:2016749-2016768 Msa0438000:CDS 45.0%
CTTGTCTTGCAAGCAACTTG+GGG - chr3_3:2016997-2017016 None:intergenic 45.0%
GTCTTGTCTTGCAAGCAACT+TGG - chr3_3:2016999-2017018 None:intergenic 45.0%
GGGATAGGTGTTAGTTAAGG+AGG + chr3_3:2017067-2017086 Msa0438000:three_prime_UTR 45.0%
!! CCCCATAAAGTTTTATGCGG+TGG + chr3_3:2017105-2017124 Msa0438000:three_prime_UTR 45.0%
! GCGGTGGTTGATACTTTGTA+AGG + chr3_3:2017121-2017140 Msa0438000:three_prime_UTR 45.0%
!! AAATACAAAAAAAAAAAAAA+TGG - chr3_3:2012300-2012319 None:intergenic 5.0%
!! CTATGGATTCGGTGCCTTAC+AGG + chr3_3:2012170-2012189 Msa0438000:CDS 50.0%
!! ATGGATTCGGTGCCTTACAG+GGG + chr3_3:2012172-2012191 Msa0438000:CDS 50.0%
GTCATTGTGGAGGACACACA+AGG - chr3_3:2013023-2013042 None:intergenic 50.0%
GTTCATCAGAGAGAGGATGG+AGG + chr3_3:2013244-2013263 Msa0438000:intron 50.0%
TCATCAGAGAGAGGATGGAG+GGG + chr3_3:2013246-2013265 Msa0438000:intron 50.0%
GAAGAACTGAAGCCTGGGAA+AGG - chr3_3:2013882-2013901 None:intergenic 50.0%
CTTGCGAAGAACTGAAGCCT+GGG - chr3_3:2013887-2013906 None:intergenic 50.0%
ACTTGCGAAGAACTGAAGCC+TGG - chr3_3:2013888-2013907 None:intergenic 50.0%
CTTCGCAAGTTATGCAGGTG+TGG + chr3_3:2013898-2013917 Msa0438000:intron 50.0%
GATAAGGAGTTGGAGGTCCT+GGG - chr3_3:2014195-2014214 None:intergenic 50.0%
! TGAGAAGTGTGAGGGAAGGA+GGG - chr3_3:2014310-2014329 None:intergenic 50.0%
! ATGAGAAGTGTGAGGGAAGG+AGG - chr3_3:2014311-2014330 None:intergenic 50.0%
! GAGATGAGAAGTGTGAGGGA+AGG - chr3_3:2014314-2014333 None:intergenic 50.0%
! GGAGGAGATGAGAAGTGTGA+GGG - chr3_3:2014318-2014337 None:intergenic 50.0%
! TTGAGTGACTTGGGGTGATG+CGG - chr3_3:2014340-2014359 None:intergenic 50.0%
CATAGAGGGACTGAGCTGTT+TGG - chr3_3:2014517-2014536 None:intergenic 50.0%
CACAGCCCAAACCCAATACT+TGG - chr3_3:2014696-2014715 None:intergenic 50.0%
GATCTAGGCGAAGACCTTTC+TGG - chr3_3:2015034-2015053 None:intergenic 50.0%
ATGCGAGTAAGGGCAAGCTA+CGG + chr3_3:2015237-2015256 Msa0438000:CDS 50.0%
! GCCTGTGTAAAGTGCTAGTC+AGG + chr3_3:2015336-2015355 Msa0438000:CDS 50.0%
GCCTGACTAGCACTTTACAC+AGG - chr3_3:2015340-2015359 None:intergenic 50.0%
AGCTTCTCCCCTCTACAACA+AGG - chr3_3:2015640-2015659 None:intergenic 50.0%
! TGCGCGTTTTATCTCAGCAG+CGG - chr3_3:2016328-2016347 None:intergenic 50.0%
ACTTGCCTTACAATGGCACC+CGG + chr3_3:2016356-2016375 Msa0438000:CDS 50.0%
!! CTTATCCGGGTGCCATTGTA+AGG - chr3_3:2016364-2016383 None:intergenic 50.0%
CGTACGCAGCAGCAATTTCT+CGG - chr3_3:2016422-2016441 None:intergenic 50.0%
AGAAATTGCTGCTGCGTACG+AGG + chr3_3:2016422-2016441 Msa0438000:CDS 50.0%
ACGCACAAGATACGACCAAG+GGG + chr3_3:2016691-2016710 Msa0438000:CDS 50.0%
ATTCTTCAAGGTCCTCCCCT+TGG - chr3_3:2016709-2016728 None:intergenic 50.0%
GAAGAATCAGGAATGGGTGG+CGG + chr3_3:2016722-2016741 Msa0438000:CDS 50.0%
GGAGGTTTCAATCCATTCGG+TGG + chr3_3:2016752-2016771 Msa0438000:CDS 50.0%
! GGTTTCAATCCATTCGGTGG+TGG + chr3_3:2016755-2016774 Msa0438000:CDS 50.0%
! TTCAATCCATTCGGTGGTGG+TGG + chr3_3:2016758-2016777 Msa0438000:CDS 50.0%
!!! ACTTTTGATGGTGGCTTCCC+TGG + chr3_3:2016797-2016816 Msa0438000:CDS 50.0%
GTGGTCCCTTGAGGAAATCA+AGG - chr3_3:2016917-2016936 None:intergenic 50.0%
TCTTGCAAGCAACTTGGGGA+TGG - chr3_3:2016993-2017012 None:intergenic 50.0%
CACGGGGATGGGGTAATACT+TGG - chr3_3:2013931-2013950 None:intergenic 55.0%
GTTCAAAACCCGGACGAAGG+AGG - chr3_3:2014173-2014192 None:intergenic 55.0%
TGGGTTCAAAACCCGGACGA+AGG - chr3_3:2014176-2014195 None:intergenic 55.0%
!!! TTCGTCCGGGTTTTGAACCC+AGG + chr3_3:2014175-2014194 Msa0438000:intron 55.0%
GAGGTCCTGGGTTCAAAACC+CGG - chr3_3:2014183-2014202 None:intergenic 55.0%
GGATAAGGAGTTGGAGGTCC+TGG - chr3_3:2014196-2014215 None:intergenic 55.0%
! AGAAGTGTGAGGGAAGGAGG+GGG - chr3_3:2014308-2014327 None:intergenic 55.0%
! GAGAAGTGTGAGGGAAGGAG+GGG - chr3_3:2014309-2014328 None:intergenic 55.0%
! GGGAGGAGATGAGAAGTGTG+AGG - chr3_3:2014319-2014338 None:intergenic 55.0%
! TGAGTGACTTGGGGTGATGC+GGG - chr3_3:2014339-2014358 None:intergenic 55.0%
GGAGCTCTCTCAGCTATTGC+AGG + chr3_3:2014478-2014497 Msa0438000:CDS 55.0%
TGCGAGTAAGGGCAAGCTAC+GGG + chr3_3:2015238-2015257 Msa0438000:CDS 55.0%
GGTGGCAGTGGAGGAATTCA+AGG + chr3_3:2015259-2015278 Msa0438000:CDS 55.0%
ACTCTTGACGGAAGACTGGG+AGG + chr3_3:2015662-2015681 Msa0438000:CDS 55.0%
CTCTTGACGGAAGACTGGGA+GGG + chr3_3:2015663-2015682 Msa0438000:CDS 55.0%
CACAAGATACGACCAAGGGG+AGG + chr3_3:2016694-2016713 Msa0438000:CDS 55.0%
GGGGAGGACCTTGAAGAATC+AGG + chr3_3:2016710-2016729 Msa0438000:CDS 55.0%
!! TTTGATGGTGGCTTCCCTGG+TGG + chr3_3:2016800-2016819 Msa0438000:CDS 55.0%
!! GAGGGTGCCATTGCTGAGTC+TGG + chr3_3:2014818-2014837 Msa0438000:CDS 60.0%
GAGTAAGGGCAAGCTACGGG+TGG + chr3_3:2015241-2015260 Msa0438000:CDS 60.0%
GTGCTAGTCAGGCTTGGCAG+AGG + chr3_3:2015347-2015366 Msa0438000:CDS 60.0%
! GAATCAGGAATGGGTGGCGG+CGG + chr3_3:2016725-2016744 Msa0438000:CDS 60.0%
TGCTGTCCACCACCACCGAA+TGG - chr3_3:2016767-2016786 None:intergenic 60.0%
TTCCCTGGTGGAGGCTTTCC+CGG + chr3_3:2016812-2016831 Msa0438000:CDS 60.0%
GTGGTCACGAGTCACGACCC+AGG - chr3_3:2012954-2012973 None:intergenic 65.0%
GGGGGGTTGGGTAGCTGAAC+TGG - chr3_3:2014230-2014249 None:intergenic 65.0%
GAGGGGGATGAGTGGCGCAA+TGG - chr3_3:2014292-2014311 None:intergenic 65.0%
GAGGGAAGGAGGGGGATGAG+TGG - chr3_3:2014300-2014319 None:intergenic 65.0%
! GTGACTTGGGGTGATGCGGG+AGG - chr3_3:2014336-2014355 None:intergenic 65.0%
CAAGCTACGGGTGGCAGTGG+AGG + chr3_3:2015250-2015269 Msa0438000:CDS 65.0%
! GATGGTGGCTTCCCTGGTGG+AGG + chr3_3:2016803-2016822 Msa0438000:CDS 65.0%
CACCGGGAAAGCCTCCACCA+GGG - chr3_3:2016817-2016836 None:intergenic 65.0%
GGGCAAGCTACGGGTGGCAG+TGG + chr3_3:2015247-2015266 Msa0438000:CDS 70.0%
! TCAGGAATGGGTGGCGGCGG+CGG + chr3_3:2016728-2016747 Msa0438000:CDS 70.0%
CCACCGGGAAAGCCTCCACC+AGG - chr3_3:2016818-2016837 None:intergenic 70.0%
CCTGGTGGAGGCTTTCCCGG+TGG + chr3_3:2016815-2016834 Msa0438000:CDS 70.0%
GGTGGAGGCTTTCCCGGTGG+CGG + chr3_3:2016818-2016837 Msa0438000:CDS 70.0%
! GGAGGCTTTCCCGGTGGCGG+CGG + chr3_3:2016821-2016840 Msa0438000:CDS 75.0%
TAACCACCGCCGCCGCCACC+GGG - chr3_3:2016833-2016852 None:intergenic 75.0%
GTAACCACCGCCGCCGCCAC+CGG - chr3_3:2016834-2016853 None:intergenic 75.0%
!! GGAATGGGTGGCGGCGGCGG+TGG + chr3_3:2016731-2016750 Msa0438000:CDS 80.0%
!! ATGGGTGGCGGCGGCGGTGG+AGG + chr3_3:2016734-2016753 Msa0438000:CDS 80.0%
!! GGCTTTCCCGGTGGCGGCGG+CGG + chr3_3:2016824-2016843 Msa0438000:CDS 80.0%
!! TTTCCCGGTGGCGGCGGCGG+TGG + chr3_3:2016827-2016846 Msa0438000:CDS 80.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 2012027 2017225 2012027 ID=Msa0438000;Name=Msa0438000
chr3_3 mRNA 2012027 2017225 2012027 ID=Msa0438000-mRNA-1;Parent=Msa0438000;Name=Msa0438000-mRNA-1;_AED=0.12;_eAED=0.12;_QI=112|1|1|1|1|1|9|357|485
chr3_3 exon 2012027 2012274 2012027 ID=Msa0438000-mRNA-1:exon:430;Parent=Msa0438000-mRNA-1
chr3_3 exon 2013761 2013914 2013761 ID=Msa0438000-mRNA-1:exon:431;Parent=Msa0438000-mRNA-1
chr3_3 exon 2014409 2014610 2014409 ID=Msa0438000-mRNA-1:exon:432;Parent=Msa0438000-mRNA-1
chr3_3 exon 2014773 2014933 2014773 ID=Msa0438000-mRNA-1:exon:433;Parent=Msa0438000-mRNA-1
chr3_3 exon 2015025 2015118 2015025 ID=Msa0438000-mRNA-1:exon:434;Parent=Msa0438000-mRNA-1
chr3_3 exon 2015227 2015439 2015227 ID=Msa0438000-mRNA-1:exon:435;Parent=Msa0438000-mRNA-1
chr3_3 exon 2015648 2015728 2015648 ID=Msa0438000-mRNA-1:exon:436;Parent=Msa0438000-mRNA-1
chr3_3 exon 2016225 2016443 2016225 ID=Msa0438000-mRNA-1:exon:437;Parent=Msa0438000-mRNA-1
chr3_3 exon 2016671 2017225 2016671 ID=Msa0438000-mRNA-1:exon:438;Parent=Msa0438000-mRNA-1
chr3_3 five_prime_UTR 2012027 2012138 2012027 ID=Msa0438000-mRNA-1:five_prime_utr;Parent=Msa0438000-mRNA-1
chr3_3 CDS 2012139 2012274 2012139 ID=Msa0438000-mRNA-1:cds;Parent=Msa0438000-mRNA-1
chr3_3 CDS 2013761 2013914 2013761 ID=Msa0438000-mRNA-1:cds;Parent=Msa0438000-mRNA-1
chr3_3 CDS 2014409 2014610 2014409 ID=Msa0438000-mRNA-1:cds;Parent=Msa0438000-mRNA-1
chr3_3 CDS 2014773 2014933 2014773 ID=Msa0438000-mRNA-1:cds;Parent=Msa0438000-mRNA-1
chr3_3 CDS 2015025 2015118 2015025 ID=Msa0438000-mRNA-1:cds;Parent=Msa0438000-mRNA-1
chr3_3 CDS 2015227 2015439 2015227 ID=Msa0438000-mRNA-1:cds;Parent=Msa0438000-mRNA-1
chr3_3 CDS 2015648 2015728 2015648 ID=Msa0438000-mRNA-1:cds;Parent=Msa0438000-mRNA-1
chr3_3 CDS 2016225 2016443 2016225 ID=Msa0438000-mRNA-1:cds;Parent=Msa0438000-mRNA-1
chr3_3 CDS 2016671 2016868 2016671 ID=Msa0438000-mRNA-1:cds;Parent=Msa0438000-mRNA-1
chr3_3 three_prime_UTR 2016869 2017225 2016869 ID=Msa0438000-mRNA-1:three_prime_utr;Parent=Msa0438000-mRNA-1
Gene Sequence

>Msa0438000

ATGCTTAATCTTATTGGTTTCTCGTTGTTAACTATGGATTCGGTGCCTTACAGGGGATTGTTTCAGACATTCTTCATACTCAATTATGTTTTGCTTTGCCAACTTGTCATTATTCAACCCTTTGTTTCTGCTTCAGGAAATGCAGCTGAGTTGTTTGAGAAAGCATCTCGAAGTATAAAAGGGAAACATTATACTGAGGCACTTAATGATCTAAATGCTGCAATAGAAGAAGATCCAAACCTTTCAGAAGCATACCTTTCCCAGGCTTCAGTTCTTCGCAAGTTATGCAGATATGAGCAATCTGAGAGGAGCTACAAAAAGTTTCTGGAGTTAAAACCCGGACATTCAATTGCAGAAAAGGAGCTCTCTCAGCTATTGCAGGCTCAAAGTGCGCTCCAAACAGCTCAGTCCCTCTATGAGTCAGCCAACTTCACAAAATCTTTGGAATACATTGATAAAGTTGTTCTTGTTTTCTCTCCAGCATGCACTAAGGCTAAGCTTCTTAAAGTGAGGTTGTTGATATCTGATAAAGAGTATGAGGGTGCCATTGCTGAGTCTGGTTTTCTTCTCAAGGAAGATGAAAACAATTTAGAGGCATTGTTGTTACGTGGTCGTGCATATTACTATTTAGCTGATCATGATGTTGCTACAAGGCATTACCAGAAAGGTCTTCGCCTAGATCCTGAGCATAGTGAACTGAAAAAAGCATACTTTGGACTGAAAAATCTACTCAAAAAGAGTAAAAGTGCTGAAGATAATGCGAGTAAGGGCAAGCTACGGGTGGCAGTGGAGGAATTCAAGGCTGCACTTGCTGTCGACCCTGACCATCTTGCACATAATGTACATCTTCATCTTGGCCTGTGTAAAGTGCTAGTCAGGCTTGGCAGAGGAAAAGACGCCTTGAACAGTTGTAGTGAAGCTCTTAAGATCGATGAGGAACTTATTGATGCTCTTGTTCAGAGGGGAGAAGCTAAACTCTTGACGGAAGACTGGGAGGGAGCTGTTGAAGATCTGAAATCAGCTGCTCAAAAATCTCCTCAGGATATGAATATTCGTGAAGCATTAATGAGGGCTGAAAAAGCTTTAAAGATCAGCAAACGCAAGGATTATTACAAGATTTTGGAAATTTCAAAACATGCTTCCGCTGCTGAGATAAAACGCGCATACAAGAAACTTGCCTTACAATGGCACCCGGATAAGAATGTTGACAAAAGGGAAGAAGCAGAGGCTAAATTCCGAGAAATTGCTGCTGCGTACGAGGTTCTAAGTGATGAAGACAAACGCACAAGATACGACCAAGGGGAGGACCTTGAAGAATCAGGAATGGGTGGCGGCGGCGGTGGAGGTTTCAATCCATTCGGTGGTGGTGGACAGCAATTTCACTTTACTTTTGATGGTGGCTTCCCTGGTGGAGGCTTTCCCGGTGGCGGCGGCGGTGGTTACGAATTTCATTTTTGA
Protein sequence

>Msa0438000

MLNLIGFSLLTMDSVPYRGLFQTFFILNYVLLCQLVIIQPFVSASGNAAELFEKASRSIKGKHYTEALNDLNAAIEEDPNLSEAYLSQASVLRKLCRYEQSERSYKKFLELKPGHSIAEKELSQLLQAQSALQTAQSLYESANFTKSLEYIDKVVLVFSPACTKAKLLKVRLLISDKEYEGAIAESGFLLKEDENNLEALLLRGRAYYYLADHDVATRHYQKGLRLDPEHSELKKAYFGLKNLLKKSKSAEDNASKGKLRVAVEEFKAALAVDPDHLAHNVHLHLGLCKVLVRLGRGKDALNSCSEALKIDEELIDALVQRGEAKLLTEDWEGAVEDLKSAAQKSPQDMNIREALMRAEKALKISKRKDYYKILEISKHASAAEIKRAYKKLALQWHPDKNVDKREEAEAKFREIAAAYEVLSDEDKRTRYDQGEDLEESGMGGGGGGGFNPFGGGGQQFHFTFDGGFPGGGFPGGGGGGYEFHF*