AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0707100

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0707100 MtrunA17_Chr8g0388671 99.251 668 5 0 1 668 1 668 0.0 1345
Msa0707100 MtrunA17_Chr8g0388761 95.511 646 28 1 2 646 1 646 0.0 1223
Msa0707100 MtrunA17_Chr7g0262821 65.142 634 214 5 36 665 7 637 0.0 843
Msa0707100 MtrunA17_Chr4g0031321 63.764 643 216 5 36 663 7 647 0.0 828
Msa0707100 MtrunA17_Chr4g0031301 65.961 614 203 4 36 645 7 618 0.0 828
Msa0707100 MtrunA17_Chr7g0223181 65.472 614 206 4 36 645 7 618 0.0 825
Msa0707100 MtrunA17_Chr7g0223291 64.241 632 213 5 36 663 7 629 0.0 822
Msa0707100 MtrunA17_Chr4g0073741 64.480 625 214 5 32 652 2 622 0.0 822
Msa0707100 MtrunA17_Chr2g0284681 55.719 612 245 6 32 633 2 597 0.0 673
Msa0707100 MtrunA17_Chr6g0462601 54.125 606 271 5 39 640 10 612 0.0 659
Msa0707100 MtrunA17_Chr6g0462681 53.377 607 276 5 39 641 10 613 0.0 650
Msa0707100 MtrunA17_Chr7g0223751 54.290 606 266 8 36 635 7 607 0.0 645
Msa0707100 MtrunA17_Chr2g0298851 55.628 613 259 9 36 640 7 614 0.0 637
Msa0707100 MtrunA17_Chr7g0221661 54.323 613 270 7 36 642 7 615 0.0 637
Msa0707100 MtrunA17_Chr7g0223741 54.561 592 259 7 36 621 7 594 0.0 633
Msa0707100 MtrunA17_Chr7g0233311 53.268 612 276 7 36 640 7 615 0.0 632
Msa0707100 MtrunA17_Chr5g0427901 52.006 623 278 8 36 641 7 625 0.0 627
Msa0707100 MtrunA17_Chr2g0293581 53.105 612 277 7 36 640 8 616 0.0 626
Msa0707100 MtrunA17_Chr7g0223731 52.980 604 273 8 36 633 7 605 0.0 620
Msa0707100 MtrunA17_Chr6g0462771 51.373 619 289 6 39 648 10 625 0.0 619
Msa0707100 MtrunA17_Chr7g0223711 51.320 606 285 7 36 635 7 608 0.0 617
Msa0707100 MtrunA17_Chr7g0223851 53.821 615 269 11 36 641 16 624 0.0 617
Msa0707100 MtrunA17_Chr6g0462711 51.613 620 287 7 39 648 11 627 0.0 617
Msa0707100 MtrunA17_Chr7g0223621 52.554 607 275 9 36 635 7 607 0.0 615
Msa0707100 MtrunA17_Chr6g0462641 50.079 629 302 6 39 658 10 635 0.0 615
Msa0707100 MtrunA17_Chr7g0223031 52.059 607 280 8 36 636 7 608 0.0 614
Msa0707100 MtrunA17_Chr7g0223721 52.389 607 278 8 36 635 7 609 0.0 612
Msa0707100 MtrunA17_Chr2g0287631 52.709 609 278 7 39 640 10 615 0.0 609
Msa0707100 MtrunA17_Chr7g0223781 51.882 611 282 7 36 640 7 611 0.0 608
Msa0707100 MtrunA17_Chr7g0223801 51.718 611 283 8 36 640 7 611 0.0 608
Msa0707100 MtrunA17_Chr8g0350731 50.479 626 299 8 16 635 15 635 0.0 605
Msa0707100 MtrunA17_Chr7g0225671 53.323 617 274 11 33 641 11 621 0.0 605
Msa0707100 MtrunA17_Chr4g0040931 51.570 605 282 8 36 633 7 607 0.0 599
Msa0707100 MtrunA17_Chr7g0223701 49.756 615 289 10 36 635 7 616 0.0 594
Msa0707100 MtrunA17_Chr7g0248131 52.046 611 277 11 36 635 7 612 0.0 593
Msa0707100 MtrunA17_Chr2g0298861 50.160 624 288 11 36 640 7 626 0.0 592
Msa0707100 MtrunA17_Chr2g0296391 55.153 524 227 5 36 553 7 528 0.0 585
Msa0707100 MtrunA17_Chr2g0279901 53.276 580 244 10 38 609 56 616 0.0 581
Msa0707100 MtrunA17_Chr4g0049501 53.276 580 245 10 38 609 53 614 0.0 578
Msa0707100 MtrunA17_Chr7g0248151 51.691 621 286 10 36 647 7 622 0.0 578
Msa0707100 MtrunA17_Chr7g0223631 49.917 603 283 9 36 635 7 593 0.0 578
Msa0707100 MtrunA17_Chr7g0217971 51.783 589 255 8 36 621 7 569 0.0 573
Msa0707100 MtrunA17_Chr7g0233301 50.408 613 261 10 36 640 7 584 0.0 570
Msa0707100 MtrunA17_Chr7g0223821 51.290 620 284 11 36 643 7 620 0.0 567
Msa0707100 MtrunA17_Chr6g0462611 51.712 555 259 6 91 641 12 561 0.0 561
Msa0707100 MtrunA17_Chr4g0012541 50.326 614 283 11 36 641 7 606 0.0 558
Msa0707100 MtrunA17_Chr2g0277021 48.882 626 294 12 38 658 71 675 0.0 543
Msa0707100 MtrunA17_Chr7g0223831 49.755 613 267 11 36 640 7 586 0.0 541
Msa0707100 MtrunA17_Chr8g0390821 46.889 659 274 13 39 640 12 651 0.0 540
Msa0707100 MtrunA17_Chr7g0223541 50.274 547 264 6 101 643 31 573 0.0 535
Msa0707100 MtrunA17_Chr7g0215261 48.697 614 267 11 36 640 7 581 0.0 533
Msa0707100 MtrunA17_Chr7g0228281 47.798 613 264 9 36 641 68 631 9.78e-180 525
Msa0707100 MtrunA17_Chr7g0223681 50.383 522 250 7 118 635 2 518 2.02e-174 508
Msa0707100 MtrunA17_Chr2g0331381 49.631 542 204 7 37 573 5 482 1.37e-171 498
Msa0707100 MtrunA17_Chr2g0293601 51.167 514 209 6 36 543 7 484 5.28e-170 494
Msa0707100 MtrunA17_Chr2g0299921 62.565 382 140 3 36 415 1027 1407 6.36e-152 482
Msa0707100 MtrunA17_Chr2g0299921 63.228 378 135 4 39 413 1414 1790 8.39e-144 459
Msa0707100 MtrunA17_Chr2g0299821 60.105 381 145 4 36 410 7 386 9.02e-152 448
Msa0707100 MtrunA17_Chr2g0299821 62.000 100 29 2 473 565 387 484 9.97e-27 114
Msa0707100 MtrunA17_Chr6g0462861 42.003 619 319 15 39 641 10 604 1.20e-149 449
Msa0707100 MtrunA17_Chr2g0299791 61.155 381 145 3 36 414 1040 1419 2.10e-149 468
Msa0707100 MtrunA17_Chr2g0299851 61.417 381 144 3 35 413 1035 1414 3.36e-149 468
Msa0707100 MtrunA17_Chr2g0293561 57.453 369 150 4 36 398 7 374 1.46e-146 431
Msa0707100 MtrunA17_Chr1g0166551 42.975 605 221 12 39 635 6 494 1.16e-141 423
Msa0707100 MtrunA17_Chr2g0299881 58.186 397 159 5 38 428 1038 1433 2.64e-140 445
Msa0707100 MtrunA17_Chr2g0299881 60.317 63 24 1 212 274 1414 1475 2.10e-15 80.5
Msa0707100 MtrunA17_Chr2g0293271 44.495 436 164 7 50 479 43 406 7.52e-113 345
Msa0707100 MtrunA17_Chr1g0151991 59.441 286 109 4 36 315 7 291 1.67e-110 335
Msa0707100 MtrunA17_Chr7g0245521 60.300 267 99 4 36 296 7 272 2.01e-104 318
Msa0707100 MtrunA17_Chr7g0245531 46.580 307 161 3 329 635 2 305 3.53e-85 270
Msa0707100 MtrunA17_Chr5g0394391 33.072 511 294 11 39 520 30 521 7.20e-81 267
Msa0707100 MtrunA17_Chr7g0223761 37.931 377 189 3 265 640 3 335 1.03e-80 259
Msa0707100 MtrunA17_Chr6g0462751 41.261 349 143 4 94 437 12 303 1.41e-80 258
Msa0707100 MtrunA17_Chr6g0462631 43.881 335 139 5 113 441 6 297 1.36e-79 254
Msa0707100 MtrunA17_Chr1g0152001 47.475 297 150 6 340 635 2 293 5.78e-78 251
Msa0707100 MtrunA17_Chr4g0004331 32.186 494 297 9 37 496 2 491 7.49e-78 265
Msa0707100 MtrunA17_Chr2g0331901 30.347 547 334 13 37 565 2 519 1.44e-73 254
Msa0707100 MtrunA17_Chr3g0098761 31.034 493 320 11 37 520 2 483 9.66e-73 250
Msa0707100 MtrunA17_Chr5g0444001 30.815 503 318 10 37 522 2 491 1.20e-71 241
Msa0707100 MtrunA17_Chr7g0223671 60.541 185 68 3 101 281 8 191 4.77e-69 224
Msa0707100 MtrunA17_Chr1g0188601 59.184 196 75 3 119 310 1 195 5.84e-69 223
Msa0707100 MtrunA17_Chr1g0188611 43.243 296 157 4 346 640 1 286 9.93e-63 210
Msa0707100 MtrunA17_Chr6g0462791 58.683 167 67 1 143 307 9 175 1.20e-61 203
Msa0707100 MtrunA17_Chr3g0120101 28.210 514 327 11 12 496 8 508 1.70e-60 218
Msa0707100 MtrunA17_Chr7g0223771 60.976 164 55 4 123 278 4 166 1.05e-56 189
Msa0707100 MtrunA17_Chr4g0064621 30.784 510 320 12 39 522 141 643 2.00e-56 203
Msa0707100 MtrunA17_Chr4g0060241 30.677 502 314 14 39 522 21 506 5.16e-54 194
Msa0707100 MtrunA17_Chr4g0046881 62.687 134 47 1 162 292 14 147 6.39e-52 176
Msa0707100 MtrunA17_Chr5g0394221 33.333 312 193 7 307 614 51 351 4.84e-48 172
Msa0707100 MtrunA17_Chr5g0442171 32.938 337 196 9 197 517 1 323 3.76e-47 169
Msa0707100 MtrunA17_Chr7g0223861 61.364 132 46 3 105 232 4 134 2.84e-44 155
Msa0707100 MtrunA17_Chr6g0462691 51.799 139 67 0 346 484 1 139 4.63e-43 152
Msa0707100 MtrunA17_Chr7g0245541 39.604 202 120 2 442 643 1 200 3.75e-39 143
Msa0707100 MtrunA17_Chr6g0462701 43.548 186 74 4 113 292 6 166 6.57e-39 141
Msa0707100 MtrunA17_Chr4g0046871 54.455 101 45 1 360 460 6 105 8.12e-31 116
Msa0707100 MtrunA17_Chr6g0481391 47.967 123 59 3 65 186 13 131 1.49e-29 113
Msa0707100 MtrunA17_Chr5g0394231 31.556 225 104 4 101 323 5 181 6.17e-27 108
Msa0707100 MtrunA17_Chr6g0462621 70.968 62 18 0 39 100 10 71 2.23e-24 97.1
Msa0707100 MtrunA17_Chr7g0223691 70.149 67 18 1 36 100 7 73 3.51e-23 93.6
Msa0707100 MtrunA17_Chr1g0188591 64.179 67 22 1 36 100 7 73 1.11e-22 92.8
Msa0707100 MtrunA17_Chr6g0481381 61.644 73 25 1 204 273 2 74 1.16e-22 95.9
Msa0707100 MtrunA17_Chr6g0481381 39.000 100 59 2 541 639 75 173 6.09e-11 62.0
Msa0707100 MtrunA17_Chr2g0284661 54.118 85 39 0 390 474 59 143 9.36e-22 92.0
Msa0707100 MtrunA17_Chr5g0442161 33.117 154 90 4 39 184 29 177 6.88e-17 79.3
Msa0707100 MtrunA17_Chr4g0064651 39.130 92 56 0 422 513 29 120 8.49e-16 74.3
Msa0707100 MtrunA17_Chr2g0299941 63.636 55 20 0 424 478 23 77 2.35e-15 72.0
Msa0707100 MtrunA17_Chr7g0223871 39.370 127 73 3 517 641 7 131 1.03e-14 71.6
Msa0707100 MtrunA17_Chr7g0221651 39.286 84 51 0 239 322 1 84 3.21e-14 68.6
Msa0707100 MtrunA17_Chr7g0223791 40.426 94 55 1 507 600 89 181 1.58e-13 69.3
Msa0707100 MtrunA17_Chr7g0223791 50.000 82 33 3 83 164 18 91 3.18e-13 68.6
Msa0707100 MtrunA17_Chr7g0223881 43.056 72 40 1 315 386 12 82 5.05e-12 62.4
Msa0707100 MtrunA17_Chr6g0462801 47.692 65 29 1 346 405 1 65 9.57e-11 58.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0707100 AT5G42020.1 91.317 668 57 1 2 668 1 668 0.0 1228
Msa0707100 AT5G42020.3 92.462 650 48 1 20 668 24 673 0.0 1212
Msa0707100 AT5G28540.1 91.641 646 54 0 2 647 1 646 0.0 1209
Msa0707100 AT5G42020.2 78.475 669 86 5 2 668 1 613 0.0 1006
Msa0707100 AT1G09080.1 79.305 633 129 2 16 647 29 660 0.0 1004
Msa0707100 AT1G09080.2 78.425 635 136 1 13 647 17 650 0.0 1003
Msa0707100 AT3G12580.1 64.342 631 217 5 36 662 7 633 0.0 828
Msa0707100 AT3G09440.1 66.124 614 202 4 36 645 7 618 0.0 826
Msa0707100 AT3G09440.4 66.124 614 202 4 36 645 7 618 0.0 826
Msa0707100 AT3G09440.2 66.124 614 202 4 36 645 7 618 0.0 826
Msa0707100 AT3G09440.3 66.124 614 202 4 36 645 7 618 0.0 826
Msa0707100 AT5G02500.1 64.984 614 209 4 36 645 7 618 0.0 822
Msa0707100 AT1G16030.1 63.608 632 223 5 32 659 2 630 0.0 822
Msa0707100 AT5G02490.1 64.984 614 209 4 36 645 7 618 0.0 817
Msa0707100 AT1G56410.1 62.704 614 221 4 36 645 7 616 0.0 786
Msa0707100 AT5G09590.1 54.138 580 240 11 38 609 59 620 0.0 583
Msa0707100 AT4G37910.1 54.483 580 238 11 38 609 54 615 0.0 558
Msa0707100 AT4G37910.2 54.483 580 238 11 38 609 54 615 0.0 558
Msa0707100 AT4G24280.1 51.473 577 261 11 38 609 80 642 0.0 543
Msa0707100 AT5G49910.1 48.576 632 290 14 38 655 80 690 0.0 540
Msa0707100 AT5G02500.2 67.010 388 123 3 36 419 7 393 0.0 527
Msa0707100 AT5G02500.2 47.115 104 54 1 542 645 386 488 4.99e-25 110
Msa0707100 AT1G11660.4 28.507 663 399 14 37 639 2 649 2.99e-82 276
Msa0707100 AT1G11660.3 28.507 663 399 14 37 639 2 649 2.99e-82 276
Msa0707100 AT1G11660.1 28.507 663 399 14 37 639 2 649 2.99e-82 276
Msa0707100 AT2G32120.1 32.681 511 313 10 39 534 31 525 1.75e-76 255
Msa0707100 AT2G32120.2 32.681 511 313 10 39 534 31 525 1.75e-76 255
Msa0707100 AT1G79930.2 31.718 454 287 7 37 473 2 449 3.21e-74 254
Msa0707100 AT1G79930.1 31.718 454 287 7 37 473 2 449 6.76e-74 254
Msa0707100 AT1G79920.3 31.278 454 289 7 37 473 2 449 4.40e-73 250
Msa0707100 AT1G79920.2 31.278 454 289 7 37 473 2 449 4.40e-73 250
Msa0707100 AT1G79920.4 31.278 454 289 7 37 473 2 449 4.40e-73 250
Msa0707100 AT1G79920.1 31.278 454 289 7 37 473 2 449 5.23e-73 250
Msa0707100 AT1G11660.2 28.435 626 373 14 74 639 2 612 5.82e-73 250
Msa0707100 AT4G16660.2 26.352 721 401 21 36 639 48 755 5.66e-64 228
Msa0707100 AT4G16660.1 26.352 721 401 21 36 639 24 731 7.13e-64 227

Find 190 sgRNAs with CRISPR-Local

Find 273 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACATCAAAGATGGTCCTTTC+AGG 0.185011 4_4:+80309157 None:intergenic
ACCAAGTTGGGGACTGTTAT+TGG 0.191697 4_4:-80309343 Msa0707100:CDS
ACCGCGGCTGCCATTGCTTA+TGG 0.226900 4_4:-80308605 Msa0707100:CDS
CAGAGATCTGGTGGTGCCCC+TGG 0.272538 4_4:-80306879 Msa0707100:CDS
TTCAAAAGTTGTTGTACCTT+TGG 0.293588 4_4:+80308001 None:intergenic
TTTGATGTCAAGAGACTTAT+CGG 0.304645 4_4:-80309142 Msa0707100:CDS
AAAATTACCGATTGTAATAA+TGG 0.308371 4_4:+80309854 None:intergenic
TCAGGGTTGACTCCCTTGTT+TGG 0.315995 4_4:+80307956 None:intergenic
AACATTCTCGTCTTTGATCT+TGG 0.318086 4_4:-80308557 Msa0707100:CDS
GTTGACAGCTGCCAGATTCT+TGG 0.318200 4_4:+80309180 None:intergenic
GTTGGGATAACAGTGTTTCT+AGG 0.344415 4_4:+80307668 None:intergenic
CCAAGTTGGGGACTGTTATT+GGG 0.351487 4_4:-80309342 Msa0707100:CDS
GTATCCAGATATTCTTCTCT+TGG 0.354348 4_4:-80307750 Msa0707100:intron
AAGGATGCCGGTGTCATTGC+TGG 0.366360 4_4:-80308659 Msa0707100:CDS
TCACAGGTCCCATTGTCTTC+CGG 0.366501 4_4:+80308101 None:intergenic
TTTACTCTTACTTGAATGTA+TGG 0.366581 4_4:+80308945 None:intergenic
CGGTGAGGCTGCCAAGAATC+TGG 0.389124 4_4:-80309191 Msa0707100:CDS
CTTGGCAAATTTGATCTGTC+TGG 0.390747 4_4:-80307442 Msa0707100:CDS
GCAGACAACTGTCTCCATTC+AGG 0.395546 4_4:-80307609 Msa0707100:intron
ATTGATGAGATTGTTCTTGT+TGG 0.396941 4_4:-80308040 Msa0707100:CDS
CTCGTCTTTGATCTTGGAGG+TGG 0.397407 4_4:-80308551 Msa0707100:CDS
CCAAAGGCAACTGCTTCATC+AGG 0.398543 4_4:+80307938 None:intergenic
AAAGAGGAAGCAACCAAGTT+GGG 0.400307 4_4:-80309355 Msa0707100:CDS
AGTTGAACAATGATTTGTTC+CGG 0.405058 4_4:-80308120 Msa0707100:CDS
CATCAAAGATGGTCCTTTCA+GGG 0.407212 4_4:+80309158 None:intergenic
AGAGATCTGGTGGTGCCCCT+GGG 0.411036 4_4:-80306878 Msa0707100:CDS
TGATAGACTGCGGTGATGAT+TGG 0.411249 4_4:+80306900 None:intergenic
GAAAATCGAGACCGCTGTTA+AGG 0.414570 4_4:-80307009 Msa0707100:CDS
GATCACCATTACAAATGAAA+AGG 0.423968 4_4:-80307216 Msa0707100:CDS
TTTGAGGTTCTTGCAACAAA+TGG 0.425716 4_4:-80308488 Msa0707100:CDS
GCTTGTCTTTGTCACTGACT+TGG 0.435960 4_4:+80307063 None:intergenic
GTAAACACCAACACACGAAT+AGG 0.438132 4_4:+80309303 None:intergenic
CCATCCGTTCAATTTCCTCC+TGG 0.438174 4_4:+80307183 None:intergenic
ATCATGGCGCTGATTTCCTC+AGG 0.440873 4_4:+80308897 None:intergenic
GGTTGCTTCCTCTTTCGCAT+TGG 0.447905 4_4:+80309363 None:intergenic
CTTCATCTTACCGAGAATCA+TGG 0.447939 4_4:+80308881 None:intergenic
GATGCCGTGGTCACCGTCCC+AGG 0.448134 4_4:-80308822 Msa0707100:intron
GGACTTTGATCAGAGAATAA+TGG 0.449888 4_4:-80308338 Msa0707100:CDS
GTTCTTGCCATTATTACAAT+CGG 0.453484 4_4:-80309861 Msa0707100:intron
CAAGTTGGAGTCGGATGAAA+AGG 0.453578 4_4:-80307033 Msa0707100:CDS
CCTGATGAAGCAGTTGCCTT+TGG 0.453901 4_4:-80307938 Msa0707100:CDS
CCCAATAACAGTCCCCAACT+TGG 0.456718 4_4:+80309342 None:intergenic
CTGGCTACTAAGAGCTCTCT+TGG 0.457156 4_4:+80308222 None:intergenic
AATTGACGCTCGGAATGCTC+TGG 0.458173 4_4:-80307111 Msa0707100:CDS
AGCAATGACACCGGCATCCT+TGG 0.458285 4_4:+80308661 None:intergenic
TGTGTTGGTGTTTACAAGAA+TGG 0.464689 4_4:-80309295 Msa0707100:CDS
CAAAGGTGACTTCAATTTGA+GGG 0.465220 4_4:+80307303 None:intergenic
GTTTCAATTCCAAGGGTAAG+AGG 0.470308 4_4:+80307719 None:intergenic
TGAAGAGAAGCTTAAAGAAG+TGG 0.473251 4_4:-80306937 Msa0707100:CDS
GGCTGCCATTGCTTATGGAT+TGG 0.473378 4_4:-80308600 Msa0707100:CDS
CTTTAATGATGCTCAGAGGC+AGG 0.474274 4_4:-80308687 Msa0707100:CDS
GAAATCAGCGCCATGATTCT+CGG 0.475491 4_4:-80308891 Msa0707100:CDS
TCGTCCATTGCCTTCTTCAC+AGG 0.478204 4_4:+80308085 None:intergenic
GATTTGTTCCGGAAGACAAT+GGG 0.480377 4_4:-80308109 Msa0707100:CDS
CTCCAACAGTTTCAATTCCA+AGG 0.480598 4_4:+80307711 None:intergenic
ACAAAGGATTGTCGCCTCCT+TGG 0.480752 4_4:-80307460 Msa0707100:CDS
TTTCCACACGGACTTGGTGC+TGG 0.487623 4_4:+80308203 None:intergenic
ATTCTCGTCTTTGATCTTGG+AGG 0.491570 4_4:-80308554 Msa0707100:CDS
TGCATGTTCCAATGCGAAAG+AGG 0.493784 4_4:-80309371 Msa0707100:CDS
AATTACGTATAGGTGTTTGA+AGG 0.495469 4_4:-80307496 Msa0707100:intron
ACCGCAGTCTATCAGAGATC+TGG 0.496140 4_4:-80306891 Msa0707100:CDS
CCTGGTAGGTGGTAAACACC+TGG 0.496443 4_4:+80307636 None:intergenic
AATGACACCGGCATCCTTGG+TGG 0.499327 4_4:+80308664 None:intergenic
ATCACCATTACAAATGAAAA+GGG 0.502193 4_4:-80307215 Msa0707100:CDS
ACTCAATTTCCACACGGACT+TGG 0.504632 4_4:+80308197 None:intergenic
ACCTTTGAAGTTGATGCAAA+CGG 0.506981 4_4:-80307287 Msa0707100:CDS
GATGTCGCACCTCTTACCCT+TGG 0.508531 4_4:-80307728 Msa0707100:CDS
AAACGGTATCTTAAATGTAA+AGG 0.508598 4_4:-80307270 Msa0707100:CDS
GACAATGGGACCTGTGAAGA+AGG 0.509040 4_4:-80308095 Msa0707100:CDS
TCAAAGGTGACTTCAATTTG+AGG 0.509100 4_4:+80307302 None:intergenic
ATTTGCTTCTTTACCTGGGA+CGG 0.509140 4_4:+80308809 None:intergenic
ACCCTTGGAATTGAAACTGT+TGG 0.511117 4_4:-80307713 Msa0707100:CDS
GCTTATGGATTGGACAAGAA+AGG 0.514548 4_4:-80308590 Msa0707100:CDS
AGACAAGCTGGCTGACAAGT+TGG 0.516201 4_4:-80307048 Msa0707100:CDS
TCCTTGCACTGCAGCACCAA+AGG 0.516370 4_4:+80307922 None:intergenic
TCTCTGTTGACAATCTTGTA+AGG 0.516434 4_4:+80308975 None:intergenic
GACCGCTGTTAAGGAAGCAT+TGG 0.517831 4_4:-80307000 Msa0707100:CDS
TCAAATCGAGCACGGGTAAG+TGG 0.518725 4_4:+80308145 None:intergenic
AAGAAGGCAATGGACGATGC+TGG 0.518963 4_4:-80308079 Msa0707100:CDS
ATTCTTCTTTCTCTACACTC+TGG 0.519549 4_4:+80306961 None:intergenic
GAAGGATTACTTTGATGGAA+AGG 0.521407 4_4:-80307981 Msa0707100:CDS
AGTCTTGCCGAGGAATCCTT+CGG 0.524333 4_4:+80308851 None:intergenic
AGGTTCGGGAAGAATCGAAC+GGG 0.525116 4_4:-80310066 None:intergenic
TTCCTCAGGGCTGAACACCT+TGG 0.527947 4_4:+80308911 None:intergenic
AGCAAGGACAACAGAGCACT+TGG 0.529505 4_4:-80308271 Msa0707100:CDS
TACAAGATTGTCAACAGAGA+TGG 0.530168 4_4:-80308972 Msa0707100:CDS
AGACAGTTGTCTGCTGATCC+TGG 0.530361 4_4:+80307618 None:intergenic
GGTGAAGTTGAAGGTGGGAA+TGG 0.531992 4_4:+80309972 None:intergenic
AGGCAGGCCACCAAGGATGC+CGG 0.534449 4_4:-80308671 Msa0707100:CDS
TATAGGTGTTTGAAGGTGAG+AGG 0.535211 4_4:-80307489 Msa0707100:intron
GAGATCTGGTGGTGCCCCTG+GGG 0.537488 4_4:-80306877 Msa0707100:CDS
TAAGGAAGCATTGGAATGGT+TGG 0.541332 4_4:-80306991 Msa0707100:CDS
AGATCTGGTGGTGCCCCTGG+GGG 0.541467 4_4:-80306876 Msa0707100:CDS
CATGATTCTCGGTAAGATGA+AGG 0.543483 4_4:-80308880 Msa0707100:CDS
TGGCAGCTGTCAACCCTGAA+AGG 0.545326 4_4:-80309171 Msa0707100:CDS
GAGCACTTGGAAAGCTGAGG+AGG 0.547900 4_4:-80308258 Msa0707100:CDS
TGAAAAGGGACGTCTAAGCC+AGG 0.549228 4_4:-80307201 Msa0707100:CDS
CTTGGAATTGAAACTGTTGG+AGG 0.549933 4_4:-80307710 Msa0707100:CDS
ACAAATGGAGATACTCATCT+TGG 0.550291 4_4:-80308473 Msa0707100:CDS
CTGGAATTCCACCAGCTCCA+AGG 0.552227 4_4:-80307423 Msa0707100:intron
TGATTTGTTCCGGAAGACAA+TGG 0.552888 4_4:-80308110 Msa0707100:CDS
AAGTCTCTTGACATCAAAGA+TGG 0.553461 4_4:+80309147 None:intergenic
GCCTTTGGTGCTGCAGTGCA+AGG 0.554487 4_4:-80307923 Msa0707100:CDS
TAACCGTATCACACCATCAT+GGG 0.554983 4_4:-80309242 Msa0707100:CDS
GATTGAAACGGTGAAGTTGA+AGG 0.555811 4_4:+80309963 None:intergenic
GAAACTGCCGAAGGATTCCT+CGG 0.559811 4_4:-80308858 Msa0707100:CDS
ATAATGGTACCGTACCTGAA+TGG 0.559928 4_4:+80307595 None:intergenic
GATGAGATTGTTCTTGTTGG+AGG 0.560264 4_4:-80308037 Msa0707100:CDS
ACCGTTTGCATCAACTTCAA+AGG 0.560447 4_4:+80307286 None:intergenic
ATACATTCAAGTAAGAGTAA+AGG 0.561049 4_4:-80308943 Msa0707100:CDS
TGCTCAGAGGCAGGCCACCA+AGG 0.561411 4_4:-80308678 Msa0707100:CDS
TGATGGAAAGGAGCCAAACA+AGG 0.561541 4_4:-80307969 Msa0707100:CDS
CCAGGTGTTTACCACCTACC+AGG 0.561692 4_4:-80307636 Msa0707100:CDS
AAATGTAAAGGCAGAAGACA+AGG 0.563758 4_4:-80307258 Msa0707100:CDS
TCCATAAGCAATGGCAGCCG+CGG 0.564691 4_4:+80308604 None:intergenic
AAACCCATGATGGTGTGATA+CGG 0.566634 4_4:+80309239 None:intergenic
ACTGTTATTGGGATAGATCT+CGG 0.567141 4_4:-80309331 Msa0707100:CDS
TGAAACGGTGAAGTTGAAGG+TGG 0.568595 4_4:+80309966 None:intergenic
ATAAGCAATGGCAGCCGCGG+TGG 0.569437 4_4:+80308607 None:intergenic
GATACGGTTACCTTGGTCGT+TGG 0.572874 4_4:+80309255 None:intergenic
AATGGAGATACTCATCTTGG+TGG 0.573155 4_4:-80308470 Msa0707100:intron
GAAAGAGGAAGCAACCAAGT+TGG 0.574592 4_4:-80309356 Msa0707100:CDS
TAAGCAATGGCAGCCGCGGT+GGG 0.575746 4_4:+80308608 None:intergenic
TCCAACAGTTTCAATTCCAA+GGG 0.575984 4_4:+80307712 None:intergenic
GAAACGGTGAAGTTGAAGGT+GGG 0.576504 4_4:+80309967 None:intergenic
CCAGGAGGAAATTGAACGGA+TGG 0.578123 4_4:-80307183 Msa0707100:CDS
AGTATCTTGACAATTGATAA+CGG 0.579845 4_4:-80308515 Msa0707100:CDS
TAGGAAACAAACCTTGGAGC+TGG 0.580707 4_4:+80307412 None:intergenic
GAAACAAACCTTGGAGCTGG+TGG 0.581798 4_4:+80307415 None:intergenic
ACCGACGATGAGAGATTGAT+CGG 0.586576 4_4:-80309211 Msa0707100:CDS
GGAACAACCTATTCGTGTGT+TGG 0.590947 4_4:-80309310 Msa0707100:CDS
CTTGTCCAATCCATAAGCAA+TGG 0.592089 4_4:+80308595 None:intergenic
CAACTCTTCAAATCGAGCAC+GGG 0.593000 4_4:+80308138 None:intergenic
ACCGATCAATCTCTCATCGT+CGG 0.593133 4_4:+80309210 None:intergenic
TCAACTCTTCAAATCGAGCA+CGG 0.593848 4_4:+80308137 None:intergenic
AGTCAGTGACAAAGACAAGC+TGG 0.596985 4_4:-80307060 Msa0707100:CDS
AGTTGTCTGCTGATCCTGGT+AGG 0.597284 4_4:+80307622 None:intergenic
CTGTTAAGGAAGCATTGGAA+TGG 0.597578 4_4:-80306995 Msa0707100:CDS
AACAGCTTCGAAGATTGAAA+CGG 0.599577 4_4:+80309951 None:intergenic
AGCTGAGGAATTTGCCGAGG+AGG 0.600157 4_4:-80307153 Msa0707100:CDS
GAAATCATAGCCAACGACCA+AGG 0.602514 4_4:-80309265 Msa0707100:CDS
AAAGGTGACTTCAATTTGAG+GGG 0.605663 4_4:+80307304 None:intergenic
AAGGCAGAAGACAAGGGCAC+CGG 0.607312 4_4:-80307251 Msa0707100:CDS
GTAACCGTATCACACCATCA+TGG 0.607690 4_4:-80309243 Msa0707100:CDS
AGCACTTGGAAAGCTGAGGA+GGG 0.611229 4_4:-80308257 Msa0707100:CDS
CAGACAGATCAAATTTGCCA+AGG 0.612363 4_4:+80307443 None:intergenic
GCTGGCTGACAAGTTGGAGT+CGG 0.613358 4_4:-80307042 Msa0707100:CDS
TCAAGGAAAGAATTGACGCT+CGG 0.615181 4_4:-80307121 Msa0707100:CDS
GCATAGCAAGGATATTAGCA+AGG 0.623368 4_4:-80308287 Msa0707100:CDS
AATGGTAAAGAGAGTGCGAT+CGG 0.626922 4_4:+80309990 None:intergenic
CAAGACTATTCGTGATGCCG+TGG 0.628700 4_4:-80308835 Msa0707100:CDS
TGTCTGCTGATCCTGGTAGG+TGG 0.629955 4_4:+80307625 None:intergenic
GCAGTCTATCAGAGATCTGG+TGG 0.631684 4_4:-80306888 Msa0707100:CDS
AAGAGGAAGCAACCAAGTTG+GGG 0.632369 4_4:-80309354 Msa0707100:CDS
CTGGTAGGTGGTAAACACCT+GGG 0.633786 4_4:+80307637 None:intergenic
AGAGAATGATGGCTGGCTCG+TGG 0.637567 4_4:-80309902 Msa0707100:exon
GGGACCTGTGAAGAAGGCAA+TGG 0.639949 4_4:-80308089 Msa0707100:CDS
ACGGATGGTTCGTGAAGCTG+AGG 0.641697 4_4:-80307168 Msa0707100:CDS
TTTACCTGGGACGGTGACCA+CGG 0.643206 4_4:+80308818 None:intergenic
TGAAGCTGAGGAATTTGCCG+AGG 0.645898 4_4:-80307156 Msa0707100:CDS
ATGGCTGGCTCGTGGCAACA+CGG 0.647508 4_4:-80309894 Msa0707100:CDS
TATGGATTGGACAAGAAAGG+TGG 0.647597 4_4:-80308587 Msa0707100:CDS
ATTCAAGTAAGAGTAAAGGA+TGG 0.649907 4_4:-80308939 Msa0707100:CDS
ACAGATCAAATTTGCCAAGG+AGG 0.650238 4_4:+80307446 None:intergenic
ATGGTGTGATACGGTTACCT+TGG 0.651491 4_4:+80309248 None:intergenic
TTCCAATGCTTCCTTAACAG+CGG 0.652838 4_4:+80306998 None:intergenic
CAAAGGCAACTGCTTCATCA+GGG 0.652946 4_4:+80307939 None:intergenic
AATGTAAAGGCAGAAGACAA+GGG 0.653777 4_4:-80307257 Msa0707100:CDS
AGTAAAGGATGGTGAGACCA+AGG 0.655359 4_4:-80308928 Msa0707100:CDS
TGTCATTGCTGGTTTGAACG+TGG 0.655475 4_4:-80308648 Msa0707100:CDS
TCATGGCGCTGATTTCCTCA+GGG 0.660657 4_4:+80308898 None:intergenic
GAGGTTCGGGAAGAATCGAA+CGG 0.661940 4_4:-80310067 None:intergenic
ACAGAGCACTTGGAAAGCTG+AGG 0.662613 4_4:-80308261 Msa0707100:CDS
GTTCAAACCAGCAATGACAC+CGG 0.667444 4_4:+80308652 None:intergenic
TCGGTGAAAGAAACCCATGA+TGG 0.669628 4_4:+80309229 None:intergenic
TTCTTGTTGGAGGAAGCACA+AGG 0.670036 4_4:-80308027 Msa0707100:CDS
GATGGAAAGGAGCCAAACAA+GGG 0.672641 4_4:-80307968 Msa0707100:CDS
AGGTGAGAGGAGTCTAACAA+AGG 0.677833 4_4:-80307476 Msa0707100:CDS
GACCAAGGTGTTCAGCCCTG+AGG 0.677974 4_4:-80308913 Msa0707100:CDS
TAGCCAGCACCAAGTCCGTG+TGG 0.679452 4_4:-80308206 Msa0707100:CDS
AGGAAGCACAAGGATTCCAA+AGG 0.684118 4_4:-80308017 Msa0707100:CDS
TAAGCCAGGAGGAAATTGAA+CGG 0.688110 4_4:-80307187 Msa0707100:CDS
CTTACTTTAATGATGCTCAG+AGG 0.702147 4_4:-80308691 Msa0707100:CDS
CATCACGAATAGTCTTGCCG+AGG 0.705761 4_4:+80308841 None:intergenic
ACCAGATCTCTGATAGACTG+CGG 0.715339 4_4:+80306890 None:intergenic
CGATGAGAGATTGATCGGTG+AGG 0.715928 4_4:-80309206 Msa0707100:CDS
AAGATGAAGGAAACTGCCGA+AGG 0.724311 4_4:-80308867 Msa0707100:CDS
AAAGGGACGTCTAAGCCAGG+AGG 0.739383 4_4:-80307198 Msa0707100:CDS
AAAGTGACTCAATTTCCACA+CGG 0.743191 4_4:+80308191 None:intergenic
AATTATTAATGAACCCACCG+CGG 0.759269 4_4:-80308621 Msa0707100:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTAATTTTCTGTTTTAATG+TGG - chr4_4:80307068-80307087 Msa0707100:CDS 15.0%
!!! TAATTTGTTATCAACATTTT+TGG - chr4_4:80307108-80307127 Msa0707100:CDS 15.0%
!! CATAAATGAATAAAATATCA+AGG + chr4_4:80307762-80307781 None:intergenic 15.0%
!!! TGTTTTGTTTTGTAATTAAT+TGG - chr4_4:80309511-80309530 Msa0707100:intron 15.0%
!!! AAAATTACCGATTGTAATAA+TGG + chr4_4:80307015-80307034 None:intergenic 20.0%
!!! TTACTATACATGCATTTTTT+TGG - chr4_4:80307221-80307240 Msa0707100:CDS 20.0%
!!! TTTGTTATCGTTATTATGTT+AGG - chr4_4:80307269-80307288 Msa0707100:CDS 20.0%
!! TTGTTATCGTTATTATGTTA+GGG - chr4_4:80307270-80307289 Msa0707100:CDS 20.0%
!!! TATTGTCTTATTCTTTTCTT+TGG - chr4_4:80308106-80308125 Msa0707100:CDS 20.0%
!!! GTTTGTTTTTAATTACGTAT+AGG - chr4_4:80309360-80309379 Msa0707100:CDS 20.0%
!!! TAATTAATTGGTTTTTCTTG+TGG - chr4_4:80309523-80309542 Msa0707100:intron 20.0%
!!! ATTCTGATTTTTTGAAGCAA+CGG + chr4_4:80306845-80306864 None:intergenic 25.0%
! GAATATGATATCGATATCAT+AGG - chr4_4:80307380-80307399 Msa0707100:intron 25.0%
! ATGTTAGTTACATCATTACA+AGG + chr4_4:80307448-80307467 None:intergenic 25.0%
!! TGTTTTCAGATTTGAAGATA+AGG - chr4_4:80307842-80307861 Msa0707100:intron 25.0%
! TTTACTCTTACTTGAATGTA+TGG + chr4_4:80307924-80307943 None:intergenic 25.0%
! ATACATTCAAGTAAGAGTAA+AGG - chr4_4:80307923-80307942 Msa0707100:CDS 25.0%
! AGTATCTTGACAATTGATAA+CGG - chr4_4:80308351-80308370 Msa0707100:intron 25.0%
! AAACGGTATCTTAAATGTAA+AGG - chr4_4:80309596-80309615 Msa0707100:intron 25.0%
! ATCACCATTACAAATGAAAA+GGG - chr4_4:80309651-80309670 Msa0707100:intron 25.0%
GTTCTTGCCATTATTACAAT+CGG - chr4_4:80307005-80307024 Msa0707100:CDS 30.0%
!! GTTATCAACATTTTTGGATC+CGG - chr4_4:80307114-80307133 Msa0707100:CDS 30.0%
AACATTTAAAAAGTTGCCAC+AGG - chr4_4:80307463-80307482 Msa0707100:CDS 30.0%
TTTGATGTCAAGAGACTTAT+CGG - chr4_4:80307724-80307743 Msa0707100:CDS 30.0%
ATTCAAGTAAGAGTAAAGGA+TGG - chr4_4:80307927-80307946 Msa0707100:CDS 30.0%
!! TGTAATTTGCTTCTTTACCT+GGG + chr4_4:80308064-80308083 None:intergenic 30.0%
!! TTGTAATTTGCTTCTTTACC+TGG + chr4_4:80308065-80308084 None:intergenic 30.0%
AATAAGACAATAGAGAATGC+CGG + chr4_4:80308098-80308117 None:intergenic 30.0%
!!! AATTGATAACGGTGTTTTTG+AGG - chr4_4:80308362-80308381 Msa0707100:intron 30.0%
CATGCATTAATAGTAGAAGA+AGG + chr4_4:80308479-80308498 None:intergenic 30.0%
!!! GAAATTGAGTCACTTTTTGA+TGG - chr4_4:80308682-80308701 Msa0707100:CDS 30.0%
!! AGTTGAACAATGATTTGTTC+CGG - chr4_4:80308746-80308765 Msa0707100:intron 30.0%
ATTGATGAGATTGTTCTTGT+TGG - chr4_4:80308826-80308845 Msa0707100:CDS 30.0%
TTCAAAAGTTGTTGTACCTT+TGG + chr4_4:80308868-80308887 None:intergenic 30.0%
!! AAAGGTACAACAACTTTTGA+AGG - chr4_4:80308867-80308886 Msa0707100:CDS 30.0%
!! CTTTTGAAGGATTACTTTGA+TGG - chr4_4:80308880-80308899 Msa0707100:CDS 30.0%
TGCTAGAGTATAGACTATAA+TGG + chr4_4:80309010-80309029 None:intergenic 30.0%
AGCATTTCAATTGCATTAGT+TGG - chr4_4:80309026-80309045 Msa0707100:intron 30.0%
! CAATTAGAAAGTGTAATGCT+TGG + chr4_4:80309082-80309101 None:intergenic 30.0%
TTTATAAGGAAAACATGCAG+TGG + chr4_4:80309298-80309317 None:intergenic 30.0%
CCAAGCAACTTGTATTTATA+AGG + chr4_4:80309312-80309331 None:intergenic 30.0%
CCTTATAAATACAAGTTGCT+TGG - chr4_4:80309309-80309328 Msa0707100:CDS 30.0%
TATAAATACAAGTTGCTTGG+CGG - chr4_4:80309312-80309331 Msa0707100:CDS 30.0%
ATTAAAAACAAACAAGACCC+CGG + chr4_4:80309353-80309372 None:intergenic 30.0%
AATTACGTATAGGTGTTTGA+AGG - chr4_4:80309370-80309389 Msa0707100:CDS 30.0%
GAAAAATTCAGAAGACATAG+TGG + chr4_4:80309483-80309502 None:intergenic 30.0%
GATCACCATTACAAATGAAA+AGG - chr4_4:80309650-80309669 Msa0707100:intron 30.0%
! GTTTTTCATGTTGTAGACAT+AGG + chr4_4:80309784-80309803 None:intergenic 30.0%
ATCGAACGGGACTATAAAAA+CGG - chr4_4:80306813-80306832 Msa0707100:exon 35.0%
AACAGCTTCGAAGATTGAAA+CGG + chr4_4:80306918-80306937 None:intergenic 35.0%
ACTGTTATTGGGATAGATCT+CGG - chr4_4:80307535-80307554 Msa0707100:intron 35.0%
! TGTGTTGGTGTTTACAAGAA+TGG - chr4_4:80307571-80307590 Msa0707100:intron 35.0%
AAGTCTCTTGACATCAAAGA+TGG + chr4_4:80307722-80307741 None:intergenic 35.0%
TCTCTGTTGACAATCTTGTA+AGG + chr4_4:80307894-80307913 None:intergenic 35.0%
TACAAGATTGTCAACAGAGA+TGG - chr4_4:80307894-80307913 Msa0707100:CDS 35.0%
AAATTACAACCTTGTTCCTC+CGG - chr4_4:80308076-80308095 Msa0707100:CDS 35.0%
CTTACTTTAATGATGCTCAG+AGG - chr4_4:80308175-80308194 Msa0707100:CDS 35.0%
AATTATTAATGAACCCACCG+CGG - chr4_4:80308245-80308264 Msa0707100:CDS 35.0%
AACATTCTCGTCTTTGATCT+TGG - chr4_4:80308309-80308328 Msa0707100:CDS 35.0%
! TTTGAGGTTCTTGCAACAAA+TGG - chr4_4:80308378-80308397 Msa0707100:intron 35.0%
ACAAATGGAGATACTCATCT+TGG - chr4_4:80308393-80308412 Msa0707100:intron 35.0%
GGACTTTGATCAGAGAATAA+TGG - chr4_4:80308528-80308547 Msa0707100:CDS 35.0%
! GATCAAGAAAAAGCATAGCA+AGG - chr4_4:80308567-80308586 Msa0707100:CDS 35.0%
AAAGTGACTCAATTTCCACA+CGG + chr4_4:80308678-80308697 None:intergenic 35.0%
GAAGGATTACTTTGATGGAA+AGG - chr4_4:80308885-80308904 Msa0707100:CDS 35.0%
GTATCCAGATATTCTTCTCT+TGG - chr4_4:80309116-80309135 Msa0707100:intron 35.0%
ACATCCAAGAGAAGAATATC+TGG + chr4_4:80309123-80309142 None:intergenic 35.0%
TCCAACAGTTTCAATTCCAA+GGG + chr4_4:80309157-80309176 None:intergenic 35.0%
GAAAACATGCAGTGGAATAA+TGG + chr4_4:80309290-80309309 None:intergenic 35.0%
AAAGGTGACTTCAATTTGAG+GGG + chr4_4:80309565-80309584 None:intergenic 35.0%
CAAAGGTGACTTCAATTTGA+GGG + chr4_4:80309566-80309585 None:intergenic 35.0%
TCAAAGGTGACTTCAATTTG+AGG + chr4_4:80309567-80309586 None:intergenic 35.0%
!! ACCTTTGAAGTTGATGCAAA+CGG - chr4_4:80309579-80309598 Msa0707100:intron 35.0%
AAATGTAAAGGCAGAAGACA+AGG - chr4_4:80309608-80309627 Msa0707100:intron 35.0%
AATGTAAAGGCAGAAGACAA+GGG - chr4_4:80309609-80309628 Msa0707100:intron 35.0%
! GGTGATCTTTTCTGATTTAC+CGG + chr4_4:80309637-80309656 None:intergenic 35.0%
! ACGTCCCTTTTCATTTGTAA+TGG + chr4_4:80309658-80309677 None:intergenic 35.0%
!!! CTTGACTTTTTTATCCTCCT+CGG + chr4_4:80309730-80309749 None:intergenic 35.0%
ATTCTTCTTTCTCTACACTC+TGG + chr4_4:80309908-80309927 None:intergenic 35.0%
TGAAGAGAAGCTTAAAGAAG+TGG - chr4_4:80309929-80309948 Msa0707100:five_prime_UTR 35.0%
! AATGGTAAAGAGAGTGCGAT+CGG + chr4_4:80306879-80306898 None:intergenic 40.0%
GATTGAAACGGTGAAGTTGA+AGG + chr4_4:80306906-80306925 None:intergenic 40.0%
! TATGTTACCGTGCGTTGTTT+TGG - chr4_4:80307422-80307441 Msa0707100:intron 40.0%
ACATGCAAATAGACATCCTG+TGG + chr4_4:80307482-80307501 None:intergenic 40.0%
AAAGAGGAAGCAACCAAGTT+GGG - chr4_4:80307511-80307530 Msa0707100:intron 40.0%
GTAAACACCAACACACGAAT+AGG + chr4_4:80307566-80307585 None:intergenic 40.0%
TAACCGTATCACACCATCAT+GGG - chr4_4:80307624-80307643 Msa0707100:CDS 40.0%
! AAACCCATGATGGTGTGATA+CGG + chr4_4:80307630-80307649 None:intergenic 40.0%
CATCAAAGATGGTCCTTTCA+GGG + chr4_4:80307711-80307730 None:intergenic 40.0%
ACATCAAAGATGGTCCTTTC+AGG + chr4_4:80307712-80307731 None:intergenic 40.0%
CTTCATCTTACCGAGAATCA+TGG + chr4_4:80307988-80308007 None:intergenic 40.0%
CATGATTCTCGGTAAGATGA+AGG - chr4_4:80307986-80308005 Msa0707100:CDS 40.0%
ATTTGCTTCTTTACCTGGGA+CGG + chr4_4:80308060-80308079 None:intergenic 40.0%
CTTGTCCAATCCATAAGCAA+TGG + chr4_4:80308274-80308293 None:intergenic 40.0%
!! GCTTATGGATTGGACAAGAA+AGG - chr4_4:80308276-80308295 Msa0707100:CDS 40.0%
!! TATGGATTGGACAAGAAAGG+TGG - chr4_4:80308279-80308298 Msa0707100:CDS 40.0%
ATTCTCGTCTTTGATCTTGG+AGG - chr4_4:80308312-80308331 Msa0707100:CDS 40.0%
AATGGAGATACTCATCTTGG+TGG - chr4_4:80308396-80308415 Msa0707100:intron 40.0%
ATTCTCTACCATTCTTTGCC+AGG - chr4_4:80308502-80308521 Msa0707100:CDS 40.0%
GCATAGCAAGGATATTAGCA+AGG - chr4_4:80308579-80308598 Msa0707100:CDS 40.0%
TCAACTCTTCAAATCGAGCA+CGG + chr4_4:80308732-80308751 None:intergenic 40.0%
!! TGATTTGTTCCGGAAGACAA+TGG - chr4_4:80308756-80308775 Msa0707100:intron 40.0%
! GATTTGTTCCGGAAGACAAT+GGG - chr4_4:80308757-80308776 Msa0707100:intron 40.0%
GATGAGATTGTTCTTGTTGG+AGG - chr4_4:80308829-80308848 Msa0707100:CDS 40.0%
GTTTCAATTCCAAGGGTAAG+AGG + chr4_4:80309150-80309169 None:intergenic 40.0%
ACCCTTGGAATTGAAACTGT+TGG - chr4_4:80309153-80309172 Msa0707100:CDS 40.0%
CTCCAACAGTTTCAATTCCA+AGG + chr4_4:80309158-80309177 None:intergenic 40.0%
CTTGGAATTGAAACTGTTGG+AGG - chr4_4:80309156-80309175 Msa0707100:CDS 40.0%
GTTGGGATAACAGTGTTTCT+AGG + chr4_4:80309201-80309220 None:intergenic 40.0%
TATCCCAACCAAAAAATCCC+AGG - chr4_4:80309212-80309231 Msa0707100:CDS 40.0%
!!! ACACCTGGGATTTTTTGGTT+GGG + chr4_4:80309218-80309237 None:intergenic 40.0%
!!! AACACCTGGGATTTTTTGGT+TGG + chr4_4:80309219-80309238 None:intergenic 40.0%
!!! GGTAAACACCTGGGATTTTT+TGG + chr4_4:80309223-80309242 None:intergenic 40.0%
ATAATGGTACCGTACCTGAA+TGG + chr4_4:80309274-80309293 None:intergenic 40.0%
TATAGGTGTTTGAAGGTGAG+AGG - chr4_4:80309377-80309396 Msa0707100:CDS 40.0%
ACAGATCAAATTTGCCAAGG+AGG + chr4_4:80309423-80309442 None:intergenic 40.0%
CAGACAGATCAAATTTGCCA+AGG + chr4_4:80309426-80309445 None:intergenic 40.0%
CTTGGCAAATTTGATCTGTC+TGG - chr4_4:80309424-80309443 Msa0707100:intron 40.0%
TGGAAGTAGGAAACAAACCT+TGG + chr4_4:80309463-80309482 None:intergenic 40.0%
! TCAGAAGACATAGTGGAAGT+AGG + chr4_4:80309476-80309495 None:intergenic 40.0%
TTCTTGTGGCAATTGAACAG+AGG - chr4_4:80309537-80309556 Msa0707100:intron 40.0%
ACCGTTTGCATCAACTTCAA+AGG + chr4_4:80309583-80309602 None:intergenic 40.0%
TAAGCCAGGAGGAAATTGAA+CGG - chr4_4:80309679-80309698 Msa0707100:intron 40.0%
CGAGGAGGATAAAAAAGTCA+AGG - chr4_4:80309728-80309747 Msa0707100:intron 40.0%
TCAAGGAAAGAATTGACGCT+CGG - chr4_4:80309745-80309764 Msa0707100:intron 40.0%
TTCCAATGCTTCCTTAACAG+CGG + chr4_4:80309871-80309890 None:intergenic 40.0%
!! CTGTTAAGGAAGCATTGGAA+TGG - chr4_4:80309871-80309890 Msa0707100:CDS 40.0%
!! TAAGGAAGCATTGGAATGGT+TGG - chr4_4:80309875-80309894 Msa0707100:CDS 40.0%
GAAACGGTGAAGTTGAAGGT+GGG + chr4_4:80306902-80306921 None:intergenic 45.0%
TGAAACGGTGAAGTTGAAGG+TGG + chr4_4:80306903-80306922 None:intergenic 45.0%
GAGAGAGAGAGAGAGAATGA+TGG - chr4_4:80306953-80306972 Msa0707100:CDS 45.0%
CGCATACAGTTGAACGAAAC+CGG + chr4_4:80307136-80307155 None:intergenic 45.0%
TACAAGGCCAAAACAACGCA+CGG + chr4_4:80307432-80307451 None:intergenic 45.0%
TGCATGTTCCAATGCGAAAG+AGG - chr4_4:80307495-80307514 Msa0707100:intron 45.0%
GAAAGAGGAAGCAACCAAGT+TGG - chr4_4:80307510-80307529 Msa0707100:intron 45.0%
AAGAGGAAGCAACCAAGTTG+GGG - chr4_4:80307512-80307531 Msa0707100:intron 45.0%
! ACCAAGTTGGGGACTGTTAT+TGG - chr4_4:80307523-80307542 Msa0707100:intron 45.0%
! CCAAGTTGGGGACTGTTATT+GGG - chr4_4:80307524-80307543 Msa0707100:intron 45.0%
GGAACAACCTATTCGTGTGT+TGG - chr4_4:80307556-80307575 Msa0707100:intron 45.0%
GAAATCATAGCCAACGACCA+AGG - chr4_4:80307601-80307620 Msa0707100:intron 45.0%
ATGGTGTGATACGGTTACCT+TGG + chr4_4:80307621-80307640 None:intergenic 45.0%
GTAACCGTATCACACCATCA+TGG - chr4_4:80307623-80307642 Msa0707100:CDS 45.0%
TCGGTGAAAGAAACCCATGA+TGG + chr4_4:80307640-80307659 None:intergenic 45.0%
ACCGACGATGAGAGATTGAT+CGG - chr4_4:80307655-80307674 Msa0707100:CDS 45.0%
ACCGATCAATCTCTCATCGT+CGG + chr4_4:80307659-80307678 None:intergenic 45.0%
AGTAAAGGATGGTGAGACCA+AGG - chr4_4:80307938-80307957 Msa0707100:CDS 45.0%
GAAATCAGCGCCATGATTCT+CGG - chr4_4:80307975-80307994 Msa0707100:CDS 45.0%
AAGATGAAGGAAACTGCCGA+AGG - chr4_4:80307999-80308018 Msa0707100:CDS 45.0%
AAGACAATAGAGAATGCCGG+AGG + chr4_4:80308095-80308114 None:intergenic 45.0%
CTTTAATGATGCTCAGAGGC+AGG - chr4_4:80308179-80308198 Msa0707100:CDS 45.0%
GTTCAAACCAGCAATGACAC+CGG + chr4_4:80308217-80308236 None:intergenic 45.0%
!! TGTCATTGCTGGTTTGAACG+TGG - chr4_4:80308218-80308237 Msa0707100:CDS 45.0%
ACTCAATTTCCACACGGACT+TGG + chr4_4:80308672-80308691 None:intergenic 45.0%
CAACTCTTCAAATCGAGCAC+GGG + chr4_4:80308731-80308750 None:intergenic 45.0%
! TTCTTGTTGGAGGAAGCACA+AGG - chr4_4:80308839-80308858 Msa0707100:CDS 45.0%
! AGGAAGCACAAGGATTCCAA+AGG - chr4_4:80308849-80308868 Msa0707100:CDS 45.0%
TGATGGAAAGGAGCCAAACA+AGG - chr4_4:80308897-80308916 Msa0707100:CDS 45.0%
GATGGAAAGGAGCCAAACAA+GGG - chr4_4:80308898-80308917 Msa0707100:CDS 45.0%
CAAAGGCAACTGCTTCATCA+GGG + chr4_4:80308930-80308949 None:intergenic 45.0%
!!! GTGCAAGGAAGCATTTTGAG+TGG - chr4_4:80308958-80308977 Msa0707100:CDS 45.0%
CAACTGTCTCCATTCAGGTA+CGG - chr4_4:80309262-80309281 Msa0707100:CDS 45.0%
AGGTGAGAGGAGTCTAACAA+AGG - chr4_4:80309390-80309409 Msa0707100:intron 45.0%
TAGGAAACAAACCTTGGAGC+TGG + chr4_4:80309457-80309476 None:intergenic 45.0%
! GCTTGTCTTTGTCACTGACT+TGG + chr4_4:80309806-80309825 None:intergenic 45.0%
AGTCAGTGACAAAGACAAGC+TGG - chr4_4:80309806-80309825 Msa0707100:intron 45.0%
! CAAGTTGGAGTCGGATGAAA+AGG - chr4_4:80309833-80309852 Msa0707100:intron 45.0%
GAAAATCGAGACCGCTGTTA+AGG - chr4_4:80309857-80309876 Msa0707100:intron 45.0%
TGATAGACTGCGGTGATGAT+TGG + chr4_4:80309969-80309988 None:intergenic 45.0%
ACCAGATCTCTGATAGACTG+CGG + chr4_4:80309979-80309998 None:intergenic 45.0%
!!! TTTTTTATAATTTGATTTAA+TGG - chr4_4:80307795-80307814 Msa0707100:intron 5.0%
!!! TTTTTATAATTTGATTTAAT+GGG - chr4_4:80307796-80307815 Msa0707100:intron 5.0%
GGTGAAGTTGAAGGTGGGAA+TGG + chr4_4:80306897-80306916 None:intergenic 50.0%
GAGAGAGAGAGAATGATGGC+TGG - chr4_4:80306957-80306976 Msa0707100:CDS 50.0%
GGTTGCTTCCTCTTTCGCAT+TGG + chr4_4:80307506-80307525 None:intergenic 50.0%
CCCAATAACAGTCCCCAACT+TGG + chr4_4:80307527-80307546 None:intergenic 50.0%
GATACGGTTACCTTGGTCGT+TGG + chr4_4:80307614-80307633 None:intergenic 50.0%
CGATGAGAGATTGATCGGTG+AGG - chr4_4:80307660-80307679 Msa0707100:CDS 50.0%
GTTGACAGCTGCCAGATTCT+TGG + chr4_4:80307689-80307708 None:intergenic 50.0%
!! TCATGGCGCTGATTTCCTCA+GGG + chr4_4:80307971-80307990 None:intergenic 50.0%
!! ATCATGGCGCTGATTTCCTC+AGG + chr4_4:80307972-80307991 None:intergenic 50.0%
GAAACTGCCGAAGGATTCCT+CGG - chr4_4:80308008-80308027 Msa0707100:CDS 50.0%
AGTCTTGCCGAGGAATCCTT+CGG + chr4_4:80308018-80308037 None:intergenic 50.0%
! CATCACGAATAGTCTTGCCG+AGG + chr4_4:80308028-80308047 None:intergenic 50.0%
CAAGACTATTCGTGATGCCG+TGG - chr4_4:80308031-80308050 Msa0707100:CDS 50.0%
TAGAGAATGCCGGAGGAACA+AGG + chr4_4:80308088-80308107 None:intergenic 50.0%
GGCTGCCATTGCTTATGGAT+TGG - chr4_4:80308266-80308285 Msa0707100:CDS 50.0%
CTCGTCTTTGATCTTGGAGG+TGG - chr4_4:80308315-80308334 Msa0707100:CDS 50.0%
CTACCATTCTTTGCCAGGTG+AGG - chr4_4:80308507-80308526 Msa0707100:CDS 50.0%
AGTCCTCACCTGGCAAAGAA+TGG + chr4_4:80308513-80308532 None:intergenic 50.0%
CTCTGATCAAAGTCCTCACC+TGG + chr4_4:80308523-80308542 None:intergenic 50.0%
! AGCAAGGACAACAGAGCACT+TGG - chr4_4:80308595-80308614 Msa0707100:CDS 50.0%
! ACAGAGCACTTGGAAAGCTG+AGG - chr4_4:80308605-80308624 Msa0707100:CDS 50.0%
AGCACTTGGAAAGCTGAGGA+GGG - chr4_4:80308609-80308628 Msa0707100:CDS 50.0%
CTGGCTACTAAGAGCTCTCT+TGG + chr4_4:80308647-80308666 None:intergenic 50.0%
TCAAATCGAGCACGGGTAAG+TGG + chr4_4:80308724-80308743 None:intergenic 50.0%
TCACAGGTCCCATTGTCTTC+CGG + chr4_4:80308768-80308787 None:intergenic 50.0%
GACAATGGGACCTGTGAAGA+AGG - chr4_4:80308771-80308790 Msa0707100:intron 50.0%
TCGTCCATTGCCTTCTTCAC+AGG + chr4_4:80308784-80308803 None:intergenic 50.0%
AAGAAGGCAATGGACGATGC+TGG - chr4_4:80308787-80308806 Msa0707100:intron 50.0%
! TCAGGGTTGACTCCCTTGTT+TGG + chr4_4:80308913-80308932 None:intergenic 50.0%
CCAAAGGCAACTGCTTCATC+AGG + chr4_4:80308931-80308950 None:intergenic 50.0%
CCTGATGAAGCAGTTGCCTT+TGG - chr4_4:80308928-80308947 Msa0707100:CDS 50.0%
!!! AGGAAGCATTTTGAGTGGCG+AGG - chr4_4:80308963-80308982 Msa0707100:CDS 50.0%
!!! GGAAGCATTTTGAGTGGCGA+GGG - chr4_4:80308964-80308983 Msa0707100:CDS 50.0%
!! GAAGCATTTTGAGTGGCGAG+GGG - chr4_4:80308965-80308984 Msa0707100:CDS 50.0%
!! AAGCATTTTGAGTGGCGAGG+GGG - chr4_4:80308966-80308985 Msa0707100:CDS 50.0%
GAGGGGGGAGATGAAACTAA+AGG - chr4_4:80308982-80309001 Msa0707100:CDS 50.0%
CTGGTAGGTGGTAAACACCT+GGG + chr4_4:80309232-80309251 None:intergenic 50.0%
AGTTGTCTGCTGATCCTGGT+AGG + chr4_4:80309247-80309266 None:intergenic 50.0%
AGACAGTTGTCTGCTGATCC+TGG + chr4_4:80309251-80309270 None:intergenic 50.0%
GCAGACAACTGTCTCCATTC+AGG - chr4_4:80309257-80309276 Msa0707100:CDS 50.0%
GCGGTGAACTTGAACTCAAC+CGG - chr4_4:80309331-80309350 Msa0707100:CDS 50.0%
CGGTGAACTTGAACTCAACC+GGG - chr4_4:80309332-80309351 Msa0707100:CDS 50.0%
GGTGAACTTGAACTCAACCG+GGG - chr4_4:80309333-80309352 Msa0707100:CDS 50.0%
ACAAAGGATTGTCGCCTCCT+TGG - chr4_4:80309406-80309425 Msa0707100:intron 50.0%
GAAACAAACCTTGGAGCTGG+TGG + chr4_4:80309454-80309473 None:intergenic 50.0%
TGAAAAGGGACGTCTAAGCC+AGG - chr4_4:80309665-80309684 Msa0707100:intron 50.0%
CCATCCGTTCAATTTCCTCC+TGG + chr4_4:80309686-80309705 None:intergenic 50.0%
CCAGGAGGAAATTGAACGGA+TGG - chr4_4:80309683-80309702 Msa0707100:intron 50.0%
TGAAGCTGAGGAATTTGCCG+AGG - chr4_4:80309710-80309729 Msa0707100:intron 50.0%
AATTGACGCTCGGAATGCTC+TGG - chr4_4:80309755-80309774 Msa0707100:intron 50.0%
AGACAAGCTGGCTGACAAGT+TGG - chr4_4:80309818-80309837 Msa0707100:intron 50.0%
! GACCGCTGTTAAGGAAGCAT+TGG - chr4_4:80309866-80309885 Msa0707100:CDS 50.0%
ACCGCAGTCTATCAGAGATC+TGG - chr4_4:80309975-80309994 Msa0707100:five_prime_UTR 50.0%
GCAGTCTATCAGAGATCTGG+TGG - chr4_4:80309978-80309997 Msa0707100:five_prime_UTR 50.0%
!! AGAGAATGATGGCTGGCTCG+TGG - chr4_4:80306964-80306983 Msa0707100:CDS 55.0%
TGGCAGCTGTCAACCCTGAA+AGG - chr4_4:80307695-80307714 Msa0707100:CDS 55.0%
TTCCTCAGGGCTGAACACCT+TGG + chr4_4:80307958-80307977 None:intergenic 55.0%
TTTACCTGGGACGGTGACCA+CGG + chr4_4:80308051-80308070 None:intergenic 55.0%
AATGACACCGGCATCCTTGG+TGG + chr4_4:80308205-80308224 None:intergenic 55.0%
AGCAATGACACCGGCATCCT+TGG + chr4_4:80308208-80308227 None:intergenic 55.0%
!! AAGGATGCCGGTGTCATTGC+TGG - chr4_4:80308207-80308226 Msa0707100:CDS 55.0%
TCCATAAGCAATGGCAGCCG+CGG + chr4_4:80308265-80308284 None:intergenic 55.0%
GAGCACTTGGAAAGCTGAGG+AGG - chr4_4:80308608-80308627 Msa0707100:CDS 55.0%
!! TTTCCACACGGACTTGGTGC+TGG + chr4_4:80308666-80308685 None:intergenic 55.0%
GGGACCTGTGAAGAAGGCAA+TGG - chr4_4:80308777-80308796 Msa0707100:intron 55.0%
TCCTTGCACTGCAGCACCAA+AGG + chr4_4:80308947-80308966 None:intergenic 55.0%
!! AGCATTTTGAGTGGCGAGGG+GGG - chr4_4:80308967-80308986 Msa0707100:CDS 55.0%
GATGTCGCACCTCTTACCCT+TGG - chr4_4:80309138-80309157 Msa0707100:CDS 55.0%
CCTGGTAGGTGGTAAACACC+TGG + chr4_4:80309233-80309252 None:intergenic 55.0%
CCAGGTGTTTACCACCTACC+AGG - chr4_4:80309230-80309249 Msa0707100:CDS 55.0%
TGTCTGCTGATCCTGGTAGG+TGG + chr4_4:80309244-80309263 None:intergenic 55.0%
CTGGAATTCCACCAGCTCCA+AGG - chr4_4:80309443-80309462 Msa0707100:intron 55.0%
! AAGGCAGAAGACAAGGGCAC+CGG - chr4_4:80309615-80309634 Msa0707100:intron 55.0%
AAAGGGACGTCTAAGCCAGG+AGG - chr4_4:80309668-80309687 Msa0707100:intron 55.0%
ACGGATGGTTCGTGAAGCTG+AGG - chr4_4:80309698-80309717 Msa0707100:intron 55.0%
AGCTGAGGAATTTGCCGAGG+AGG - chr4_4:80309713-80309732 Msa0707100:intron 55.0%
! GCTGGCTGACAAGTTGGAGT+CGG - chr4_4:80309824-80309843 Msa0707100:intron 55.0%
!! ATGGCTGGCTCGTGGCAACA+CGG - chr4_4:80306972-80306991 Msa0707100:CDS 60.0%
CGGTGAGGCTGCCAAGAATC+TGG - chr4_4:80307675-80307694 Msa0707100:CDS 60.0%
! GACCAAGGTGTTCAGCCCTG+AGG - chr4_4:80307953-80307972 Msa0707100:CDS 60.0%
TAAGCAATGGCAGCCGCGGT+GGG + chr4_4:80308261-80308280 None:intergenic 60.0%
ATAAGCAATGGCAGCCGCGG+TGG + chr4_4:80308262-80308281 None:intergenic 60.0%
ACCGCGGCTGCCATTGCTTA+TGG - chr4_4:80308261-80308280 Msa0707100:CDS 60.0%
TAGCCAGCACCAAGTCCGTG+TGG - chr4_4:80308660-80308679 Msa0707100:CDS 60.0%
!! GCCTTTGGTGCTGCAGTGCA+AGG - chr4_4:80308943-80308962 Msa0707100:CDS 60.0%
! AGAGATCTGGTGGTGCCCCT+GGG - chr4_4:80309988-80310007 Msa0707100:five_prime_UTR 60.0%
TGCTCAGAGGCAGGCCACCA+AGG - chr4_4:80308188-80308207 Msa0707100:CDS 65.0%
AGGCAGGCCACCAAGGATGC+CGG - chr4_4:80308195-80308214 Msa0707100:CDS 65.0%
! CAGAGATCTGGTGGTGCCCC+TGG - chr4_4:80309987-80310006 Msa0707100:five_prime_UTR 65.0%
! GAGATCTGGTGGTGCCCCTG+GGG - chr4_4:80309989-80310008 Msa0707100:five_prime_UTR 65.0%
! AGATCTGGTGGTGCCCCTGG+GGG - chr4_4:80309990-80310009 Msa0707100:five_prime_UTR 65.0%
TGGTGCATCAGGGGGAGACG+AGG - chr4_4:80310013-80310032 Msa0707100:five_prime_UTR 65.0%
TGCATCAGGGGGAGACGAGG+AGG - chr4_4:80310016-80310035 Msa0707100:five_prime_UTR 65.0%
GATGCCGTGGTCACCGTCCC+AGG - chr4_4:80308044-80308063 Msa0707100:CDS 70.0%
CCCTGATGCACCACCCCCAG+GGG + chr4_4:80310006-80310025 None:intergenic 70.0%
CCCCTGGGGGTGGTGCATCA+GGG - chr4_4:80310003-80310022 Msa0707100:five_prime_UTR 70.0%
CCCCTGATGCACCACCCCCA+GGG + chr4_4:80310007-80310026 None:intergenic 70.0%
CCCTGGGGGTGGTGCATCAG+GGG - chr4_4:80310004-80310023 Msa0707100:five_prime_UTR 70.0%
CCTGGGGGTGGTGCATCAGG+GGG - chr4_4:80310005-80310024 Msa0707100:five_prime_UTR 70.0%
! TCTGGTGGTGCCCCTGGGGG+TGG - chr4_4:80309993-80310012 Msa0707100:five_prime_UTR 75.0%
GCCCCTGGGGGTGGTGCATC+AGG - chr4_4:80310002-80310021 Msa0707100:five_prime_UTR 75.0%
CCCCCTGATGCACCACCCCC+AGG + chr4_4:80310008-80310027 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 80306813 80310075 80306813 ID=Msa0707100;Name=Msa0707100
chr4_4 mRNA 80306813 80310075 80306813 ID=Msa0707100-mRNA-1;Parent=Msa0707100;Name=Msa0707100-mRNA-1;_AED=0.06;_eAED=0.06;_QI=156|1|1|1|1|1|8|14|668
chr4_4 exon 80306813 80307331 80306813 ID=Msa0707100-mRNA-1:exon:26106;Parent=Msa0707100-mRNA-1
chr4_4 exon 80307424 80307506 80307424 ID=Msa0707100-mRNA-1:exon:26105;Parent=Msa0707100-mRNA-1
chr4_4 exon 80307610 80307764 80307610 ID=Msa0707100-mRNA-1:exon:26104;Parent=Msa0707100-mRNA-1
chr4_4 exon 80307885 80308364 80307885 ID=Msa0707100-mRNA-1:exon:26103;Parent=Msa0707100-mRNA-1
chr4_4 exon 80308471 80308713 80308471 ID=Msa0707100-mRNA-1:exon:26102;Parent=Msa0707100-mRNA-1
chr4_4 exon 80308823 80309037 80308823 ID=Msa0707100-mRNA-1:exon:26101;Parent=Msa0707100-mRNA-1
chr4_4 exon 80309136 80309403 80309136 ID=Msa0707100-mRNA-1:exon:26100;Parent=Msa0707100-mRNA-1
chr4_4 exon 80309862 80310075 80309862 ID=Msa0707100-mRNA-1:exon:26099;Parent=Msa0707100-mRNA-1
chr4_4 five_prime_UTR 80309920 80310075 80309920 ID=Msa0707100-mRNA-1:five_prime_utr;Parent=Msa0707100-mRNA-1
chr4_4 CDS 80309862 80309919 80309862 ID=Msa0707100-mRNA-1:cds;Parent=Msa0707100-mRNA-1
chr4_4 CDS 80309136 80309403 80309136 ID=Msa0707100-mRNA-1:cds;Parent=Msa0707100-mRNA-1
chr4_4 CDS 80308823 80309037 80308823 ID=Msa0707100-mRNA-1:cds;Parent=Msa0707100-mRNA-1
chr4_4 CDS 80308471 80308713 80308471 ID=Msa0707100-mRNA-1:cds;Parent=Msa0707100-mRNA-1
chr4_4 CDS 80307885 80308364 80307885 ID=Msa0707100-mRNA-1:cds;Parent=Msa0707100-mRNA-1
chr4_4 CDS 80307610 80307764 80307610 ID=Msa0707100-mRNA-1:cds;Parent=Msa0707100-mRNA-1
chr4_4 CDS 80307424 80307506 80307424 ID=Msa0707100-mRNA-1:cds;Parent=Msa0707100-mRNA-1
chr4_4 CDS 80306827 80307331 80306827 ID=Msa0707100-mRNA-1:cds;Parent=Msa0707100-mRNA-1
chr4_4 three_prime_UTR 80306813 80306826 80306813 ID=Msa0707100-mRNA-1:three_prime_utr;Parent=Msa0707100-mRNA-1
Gene Sequence

>Msa0707100

ATGATGGCTGGCTCGTGGCAACACGGCTCTCTTTTCGTTCTTGCCATTATTACAATCGGATGTCTATTTGCATGTTCCAATGCGAAAGAGGAAGCAACCAAGTTGGGGACTGTTATTGGGATAGATCTCGGAACAACCTATTCGTGTGTTGGTGTTTACAAGAATGGTCACGTCGAAATCATAGCCAACGACCAAGGTAACCGTATCACACCATCATGGGTTTCTTTCACCGACGATGAGAGATTGATCGGTGAGGCTGCCAAGAATCTGGCAGCTGTCAACCCTGAAAGGACCATCTTTGATGTCAAGAGACTTATCGGAAGAAAATTTGAAGATAAGGAAGTTCAAAGAGACATGAAGCTTGTTCCTTACAAGATTGTCAACAGAGATGGAAAACCATACATTCAAGTAAGAGTAAAGGATGGTGAGACCAAGGTGTTCAGCCCTGAGGAAATCAGCGCCATGATTCTCGGTAAGATGAAGGAAACTGCCGAAGGATTCCTCGGCAAGACTATTCGTGATGCCGTGGTCACCGTCCCAGCTTACTTTAATGATGCTCAGAGGCAGGCCACCAAGGATGCCGGTGTCATTGCTGGTTTGAACGTGGCTAGAATTATTAATGAACCCACCGCGGCTGCCATTGCTTATGGATTGGACAAGAAAGGTGGAGAGAAGAACATTCTCGTCTTTGATCTTGGAGGTGGAACTTTTGATGTCAGTATCTTGACAATTGATAACGGTGTTTTTGAGGTTCTTGCAACAAATGGAGATACTCATCTTGGTGGTGAGGACTTTGATCAGAGAATAATGGAGTATTTCATTAAATTGATCAAGAAAAAGCATAGCAAGGATATTAGCAAGGACAACAGAGCACTTGGAAAGCTGAGGAGGGAGAGTGAGCGCGCCAAGAGAGCTCTTAGTAGCCAGCACCAAGTCCGTGTGGAAATTGAGTCACTTTTTGATGGCGTTGATTTCTCTGAGCCACTTACCCGTGCTCGATTTGAAGAGTTGAACAATGATTTGTTCCGGAAGACAATGGGACCTGTGAAGAAGGCAATGGACGATGCTGGATTACAGAAGAATCAAATTGATGAGATTGTTCTTGTTGGAGGAAGCACAAGGATTCCAAAGGTACAACAACTTTTGAAGGATTACTTTGATGGAAAGGAGCCAAACAAGGGAGTCAACCCTGATGAAGCAGTTGCCTTTGGTGCTGCAGTGCAAGGAAGCATTTTGAGTGGCGAGGGGGGAGATGAAACTAAAGATATTCTTCTCTTGGATGTCGCACCTCTTACCCTTGGAATTGAAACTGTTGGAGGAGTGATGACAAAGTTGATTCCTAGAAACACTGTTATCCCAACCAAAAAATCCCAGGTGTTTACCACCTACCAGGATCAGCAGACAACTGTCTCCATTCAGGTGTTTGAAGGTGAGAGGAGTCTAACAAAGGATTGTCGCCTCCTTGGCAAATTTGATCTGTCTGGAATTCCACCAGCTCCAAGAGGTACCCCTCAAATTGAAGTCACCTTTGAAGTTGATGCAAACGGTATCTTAAATGTAAAGGCAGAAGACAAGGGCACCGGTAAATCAGAAAAGATCACCATTACAAATGAAAAGGGACGTCTAAGCCAGGAGGAAATTGAACGGATGGTTCGTGAAGCTGAGGAATTTGCCGAGGAGGATAAAAAAGTCAAGGAAAGAATTGACGCTCGGAATGCTCTGGAAACCTATGTCTACAACATGAAAAACCAAGTCAGTGACAAAGACAAGCTGGCTGACAAGTTGGAGTCGGATGAAAAGGAGAAAATCGAGACCGCTGTTAAGGAAGCATTGGAATGGTTGGATGACAACCAGAGTGTAGAGAAAGAAGAATATGAAGAGAAGCTTAAAGAAGTGGAAGCTGTTTGTAATCCAATCATCACCGCAGTCTATCAGAGATCTGGTGGTGCCCCTGGGGGTGGTGCATCAGGGGGAGACGAGGAGGATGAATCTCATGATGAACTCTAG
Protein sequence

>Msa0707100

MMAGSWQHGSLFVLAIITIGCLFACSNAKEEATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVSFTDDERLIGEAAKNLAAVNPERTIFDVKRLIGRKFEDKEVQRDMKLVPYKIVNRDGKPYIQVRVKDGETKVFSPEEISAMILGKMKETAEGFLGKTIRDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLATNGDTHLGGEDFDQRIMEYFIKLIKKKHSKDISKDNRALGKLRRESERAKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNNDLFRKTMGPVKKAMDDAGLQKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAFGAAVQGSILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNEKGRLSQEEIERMVREAEEFAEEDKKVKERIDARNALETYVYNMKNQVSDKDKLADKLESDEKEKIETAVKEALEWLDDNQSVEKEEYEEKLKEVEAVCNPIITAVYQRSGGAPGGGASGGDEEDESHDEL*