Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1168990 | XP_003625614.2 | 96.735 | 490 | 11 | 2 | 38 | 526 | 1 | 486 | 0.0 | 954 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1168990 | sp|Q9LYW9|DNJ36_ARATH | 71.333 | 450 | 118 | 4 | 49 | 494 | 10 | 452 | 0.0 | 581 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1168990 | A0A396H591 | 96.735 | 490 | 11 | 2 | 38 | 526 | 1 | 486 | 0.0 | 954 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003930 | Msa1168990 | 0.813338 | 2.691860e-51 | -8.615850e-47 |
| Msa0102600 | Msa1168990 | 0.824492 | 7.838142e-54 | -8.615850e-47 |
| Msa0626270 | Msa1168990 | 0.808079 | 3.693905e-50 | -8.615850e-47 |
| Msa0689630 | Msa1168990 | -0.805146 | 1.537037e-49 | -8.615850e-47 |
| Msa0707100 | Msa1168990 | 0.907677 | 3.913843e-81 | -8.615850e-47 |
| Msa0739080 | Msa1168990 | 0.848353 | 6.471872e-60 | -8.615850e-47 |
| Msa0804250 | Msa1168990 | 0.802158 | 6.405837e-49 | -8.615850e-47 |
| Msa0819540 | Msa1168990 | 0.843018 | 1.813920e-58 | -8.615850e-47 |
| Msa0128360 | Msa1168990 | 0.824315 | 8.629459e-54 | -8.615850e-47 |
| Msa0147380 | Msa1168990 | 0.834812 | 2.413563e-56 | -8.615850e-47 |
| Msa0372420 | Msa1168990 | 0.859529 | 3.883705e-63 | -8.615850e-47 |
| Msa0382400 | Msa1168990 | 0.881567 | 2.156199e-70 | -8.615850e-47 |
| Msa0432130 | Msa1168990 | 0.854144 | 1.497168e-61 | -8.615850e-47 |
| Msa0438000 | Msa1168990 | 0.967674 | 1.327855e-127 | -8.615850e-47 |
| Msa0476640 | Msa1168990 | 0.854203 | 1.439416e-61 | -8.615850e-47 |
| Msa1041140 | Msa1168990 | 0.824137 | 9.499637e-54 | -8.615850e-47 |
| Msa1079190 | Msa1168990 | 0.928153 | 4.316355e-92 | -8.615850e-47 |
| Msa1082290 | Msa1168990 | 0.867592 | 1.221579e-65 | -8.615850e-47 |
| Msa0304100 | Msa1168990 | 0.820083 | 8.273069e-53 | -8.615850e-47 |
| Msa0322900 | Msa1168990 | 0.801142 | 1.035288e-48 | -8.615850e-47 |
| Msa1124060 | Msa1168990 | 0.972662 | 3.917022e-135 | -8.615850e-47 |
| Msa1124070 | Msa1168990 | 0.802850 | 4.611986e-49 | -8.615850e-47 |
| Msa1133540 | Msa1168990 | 0.933357 | 2.122720e-95 | -8.615850e-47 |
| Msa1168990 | Msa1169080 | 0.949663 | 8.057356e-108 | -8.615850e-47 |
| Msa1168990 | Msa1235380 | 0.801151 | 1.030876e-48 | -8.615850e-47 |
| Msa1168990 | Msa1315440 | 0.800073 | 1.710396e-48 | -8.615850e-47 |
| Msa1168990 | Msa1362020 | 0.851501 | 8.516887e-61 | -8.615850e-47 |
| Msa1168990 | Msa1411500 | 0.800049 | 1.729661e-48 | -8.615850e-47 |
| Msa1168990 | Msa1421460 | 0.856751 | 2.603649e-62 | -8.615850e-47 |
| Msa1168990 | Msa1422430 | 0.823904 | 1.077406e-53 | -8.615850e-47 |
| Msa0572950 | Msa1168990 | 0.810255 | 1.262210e-50 | -8.615850e-47 |
| Msa0573010 | Msa1168990 | 0.927022 | 2.094734e-91 | -8.615850e-47 |
| Msa0573090 | Msa1168990 | 0.930458 | 1.591114e-93 | -8.615850e-47 |
| Msa0859710 | Msa1168990 | 0.806392 | 8.409562e-50 | -8.615850e-47 |
| Msa0867160 | Msa1168990 | 0.810982 | 8.793225e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1168990 | MtrunA17_Chr7g0263971 | 96.735 | 490 | 11 | 2 | 38 | 526 | 1 | 486 | 0.0 | 954 |
| Msa1168990 | MtrunA17_Chr2g0282761 | 45.000 | 100 | 49 | 3 | 406 | 503 | 4 | 99 | 8.86e-16 | 79.0 |
| Msa1168990 | MtrunA17_Chr2g0324921 | 41.228 | 114 | 53 | 3 | 406 | 509 | 4 | 113 | 1.56e-15 | 77.8 |
| Msa1168990 | MtrunA17_Chr4g0040501 | 42.308 | 104 | 50 | 3 | 406 | 503 | 4 | 103 | 1.61e-15 | 78.2 |
| Msa1168990 | MtrunA17_Chr2g0282741 | 52.174 | 69 | 29 | 1 | 406 | 474 | 4 | 68 | 7.85e-15 | 75.9 |
| Msa1168990 | MtrunA17_Chr4g0006391 | 49.275 | 69 | 31 | 1 | 406 | 474 | 4 | 68 | 3.92e-14 | 73.9 |
| Msa1168990 | MtrunA17_Chr3g0138471 | 47.826 | 69 | 32 | 1 | 406 | 474 | 4 | 68 | 3.93e-14 | 73.6 |
| Msa1168990 | MtrunA17_Chr8g0344721 | 43.956 | 91 | 39 | 3 | 402 | 484 | 6 | 92 | 1.43e-12 | 67.4 |
| Msa1168990 | MtrunA17_Chr8g0334811 | 48.889 | 90 | 35 | 4 | 407 | 494 | 15 | 95 | 3.74e-12 | 68.2 |
| Msa1168990 | MtrunA17_Chr5g0427221 | 46.575 | 73 | 34 | 2 | 401 | 473 | 43 | 110 | 8.37e-12 | 63.2 |
| Msa1168990 | MtrunA17_Chr6g0478651 | 46.591 | 88 | 38 | 3 | 405 | 492 | 67 | 145 | 1.86e-11 | 66.6 |
| Msa1168990 | MtrunA17_Chr7g0269841 | 54.286 | 70 | 27 | 2 | 405 | 474 | 25 | 89 | 3.38e-11 | 64.7 |
| Msa1168990 | MtrunA17_Chr2g0333221 | 46.154 | 91 | 41 | 4 | 406 | 494 | 70 | 154 | 5.00e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1168990 | AT5G03160.1 | 71.333 | 450 | 118 | 4 | 49 | 494 | 10 | 452 | 0.0 | 581 |
| Msa1168990 | AT5G25530.2 | 41.667 | 120 | 57 | 5 | 406 | 516 | 4 | 119 | 3.02e-16 | 80.5 |
| Msa1168990 | AT5G25530.1 | 39.516 | 124 | 62 | 5 | 406 | 516 | 4 | 127 | 1.69e-15 | 78.6 |
| Msa1168990 | AT2G20560.1 | 40.777 | 103 | 48 | 3 | 406 | 507 | 4 | 94 | 2.19e-14 | 75.1 |
| Msa1168990 | AT5G01390.4 | 49.275 | 69 | 31 | 1 | 406 | 474 | 4 | 68 | 2.84e-14 | 72.8 |
| Msa1168990 | AT5G01390.3 | 49.275 | 69 | 31 | 1 | 406 | 474 | 4 | 68 | 2.94e-14 | 72.8 |
| Msa1168990 | AT4G28480.1 | 38.679 | 106 | 50 | 3 | 406 | 503 | 4 | 102 | 5.57e-14 | 73.9 |
| Msa1168990 | AT5G01390.2 | 49.275 | 69 | 31 | 1 | 406 | 474 | 4 | 68 | 5.69e-14 | 72.8 |
| Msa1168990 | AT4G28480.2 | 38.679 | 106 | 50 | 3 | 406 | 503 | 4 | 102 | 5.70e-14 | 73.2 |
| Msa1168990 | AT3G08910.1 | 47.826 | 69 | 32 | 1 | 406 | 474 | 4 | 68 | 8.33e-14 | 73.2 |
| Msa1168990 | AT5G01390.1 | 49.275 | 69 | 31 | 1 | 406 | 474 | 4 | 68 | 9.64e-14 | 72.8 |
| Msa1168990 | AT2G22360.1 | 46.667 | 90 | 41 | 3 | 406 | 494 | 86 | 169 | 2.34e-12 | 69.3 |
| Msa1168990 | AT4G39960.1 | 45.556 | 90 | 42 | 3 | 406 | 494 | 85 | 168 | 3.70e-12 | 68.9 |
| Msa1168990 | AT4G39960.2 | 45.556 | 90 | 42 | 3 | 406 | 494 | 85 | 168 | 3.70e-12 | 68.9 |
| Msa1168990 | AT1G10350.1 | 42.029 | 69 | 36 | 1 | 406 | 474 | 4 | 68 | 5.88e-12 | 67.8 |
| Msa1168990 | AT1G80030.4 | 45.946 | 111 | 45 | 6 | 406 | 511 | 75 | 175 | 7.64e-12 | 68.2 |
| Msa1168990 | AT1G80030.2 | 45.946 | 111 | 45 | 6 | 406 | 511 | 75 | 175 | 8.10e-12 | 68.2 |
| Msa1168990 | AT1G80030.3 | 45.946 | 111 | 45 | 6 | 406 | 511 | 75 | 175 | 8.10e-12 | 68.2 |
| Msa1168990 | AT1G80030.1 | 45.946 | 111 | 45 | 6 | 406 | 511 | 75 | 175 | 8.10e-12 | 68.2 |
| Msa1168990 | AT1G59725.1 | 45.946 | 74 | 34 | 3 | 406 | 477 | 4 | 73 | 1.54e-11 | 66.2 |
| Msa1168990 | AT3G47940.1 | 48.101 | 79 | 35 | 3 | 406 | 482 | 4 | 78 | 3.83e-11 | 65.1 |
| Msa1168990 | AT1G56300.2 | 44.000 | 75 | 35 | 2 | 404 | 475 | 11 | 81 | 6.38e-11 | 60.5 |
Find 133 sgRNAs with CRISPR-Local
Find 375 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTCAATGCTTAATCTTAT+TGG | 0.076910 | 7_4:-61909880 | Msa1168990:CDS |
| CAAGGATTATTACAAGATTT+TGG | 0.134713 | 7_4:-61905740 | Msa1168990:CDS |
| AACCACCGCATAAAACTTTA+TGG | 0.174264 | 7_4:+61904915 | None:intergenic |
| CAACCCTTTGTTTCTGCTTC+AGG | 0.202001 | 7_4:-61909760 | Msa1168990:intron |
| AAAGCATCTCGAAGTATAAA+AGG | 0.221656 | 7_4:-61908234 | Msa1168990:CDS |
| CTATGGATTCGGTGCCTTAC+AGG | 0.256750 | 7_4:-61909843 | Msa1168990:CDS |
| GGAATGGGTGGCGGCGGCGG+TGG | 0.261593 | 7_4:-61905291 | Msa1168990:CDS |
| TTCCCTGGTGGAGGCTTTCC+CGG | 0.267174 | 7_4:-61905210 | Msa1168990:CDS |
| AGCCAACTTCACAAAATCTT+TGG | 0.269965 | 7_4:-61907478 | Msa1168990:CDS |
| GATCTAGGCGAAGACCTTTC+TGG | 0.287530 | 7_4:+61906989 | None:intergenic |
| TGGTTTCTCGTTGTTAACTA+TGG | 0.317442 | 7_4:-61909860 | Msa1168990:CDS |
| ATGGGTGGCGGCGGCGGTGG+AGG | 0.326629 | 7_4:-61905288 | Msa1168990:CDS |
| ACTTATTGATGCTCTTGTTC+AGG | 0.335775 | 7_4:-61906602 | Msa1168990:intron |
| CACCCATTCCTGATTCTTCA+AGG | 0.347393 | 7_4:+61905304 | None:intergenic |
| CTCGTTGTTAACTATGGATT+CGG | 0.359454 | 7_4:-61909854 | Msa1168990:CDS |
| GGCTTTCCCGGTGGCGGCGG+CGG | 0.366054 | 7_4:-61905198 | Msa1168990:CDS |
| ACAAATAGTGTAATGGTTGC+TGG | 0.371153 | 7_4:+61904865 | None:intergenic |
| TCAGGAATGGGTGGCGGCGG+CGG | 0.371929 | 7_4:-61905294 | Msa1168990:CDS |
| GTCTTGTCTTGCAAGCAACT+TGG | 0.389769 | 7_4:+61905026 | None:intergenic |
| CTTATCCGGGTGCCATTGTA+AGG | 0.399906 | 7_4:+61905663 | None:intergenic |
| TTTCCCGGTGGCGGCGGCGG+TGG | 0.402220 | 7_4:-61905195 | Msa1168990:CDS |
| ACATTATGTGCAAGATGGTC+AGG | 0.406282 | 7_4:+61906721 | None:intergenic |
| GGCTGAAGATAATGCGAGTA+AGG | 0.407097 | 7_4:-61906794 | Msa1168990:CDS |
| TCTTGTCTTGCAAGCAACTT+GGG | 0.407286 | 7_4:+61905027 | None:intergenic |
| CTAAACTCTTGACGGAAGAC+TGG | 0.409882 | 7_4:-61906365 | Msa1168990:CDS |
| GTTCACTATGCTCAGGATCT+AGG | 0.412241 | 7_4:+61906974 | None:intergenic |
| AGCTTCACTACAACTGTTCA+AGG | 0.413274 | 7_4:+61906642 | None:intergenic |
| CGGACATTCAATTGCAGAAA+AGG | 0.413425 | 7_4:-61907562 | Msa1168990:CDS |
| GGAAGATGAAAACAATTTAG+AGG | 0.413639 | 7_4:-61907166 | Msa1168990:CDS |
| GCCTGTGTAAAGTGCTAGTC+AGG | 0.413773 | 7_4:-61906684 | Msa1168990:CDS |
| GGGGAGGACCTTGAAGAATC+AGG | 0.418433 | 7_4:-61905312 | Msa1168990:CDS |
| CATAGAGGGACTGAGCTGTT+TGG | 0.420825 | 7_4:+61907505 | None:intergenic |
| GAGGGTGCCATTGCTGAGTC+TGG | 0.421230 | 7_4:-61907201 | Msa1168990:CDS |
| GGGCAAGCTACGGGTGGCAG+TGG | 0.421513 | 7_4:-61906773 | Msa1168990:CDS |
| AGGTATGCTTCTGAAAGGTT+TGG | 0.434008 | 7_4:+61908159 | None:intergenic |
| GGAGCTCTCTCAGCTATTGC+AGG | 0.434656 | 7_4:-61907541 | Msa1168990:CDS |
| ACCACCGCATAAAACTTTAT+GGG | 0.437102 | 7_4:+61904916 | None:intergenic |
| TTCAATCCATTCGGTGGTGG+TGG | 0.445135 | 7_4:-61905264 | Msa1168990:CDS |
| CGGATAAGAATGTTGACAAA+AGG | 0.448605 | 7_4:-61905648 | Msa1168990:CDS |
| ACTTGCGAAGAACTGAAGCC+TGG | 0.451633 | 7_4:+61908133 | None:intergenic |
| GCGGTGGTTGATACTTTGTA+AGG | 0.452888 | 7_4:-61904901 | Msa1168990:three_prime_UTR |
| GGAGGCTTTCCCGGTGGCGG+CGG | 0.460764 | 7_4:-61905201 | Msa1168990:CDS |
| CCACCGGGAAAGCCTCCACC+AGG | 0.461120 | 7_4:+61905207 | None:intergenic |
| ATTCTTCAAGGTCCTCCCCT+TGG | 0.461750 | 7_4:+61905316 | None:intergenic |
| GATGGTGGCTTCCCTGGTGG+AGG | 0.465504 | 7_4:-61905219 | Msa1168990:CDS |
| GTCTGAAACAATCCCCTGTA+AGG | 0.471459 | 7_4:+61909829 | None:intergenic |
| TCTTGCAAGCAACTTGGGGA+TGG | 0.472326 | 7_4:+61905032 | None:intergenic |
| GATATCTGATAAAGAGTATG+AGG | 0.472530 | 7_4:-61907220 | Msa1168990:CDS |
| ATGGGGATAGGTGTTAGTTA+AGG | 0.473409 | 7_4:-61904957 | Msa1168990:three_prime_UTR |
| CAGTTCTTCGCAAGTTATGC+AGG | 0.476082 | 7_4:-61908125 | Msa1168990:intron |
| TATGGATTCGGTGCCTTACA+GGG | 0.480574 | 7_4:-61909842 | Msa1168990:CDS |
| GAATCAGGAATGGGTGGCGG+CGG | 0.483700 | 7_4:-61905297 | Msa1168990:CDS |
| CAAGCTACGGGTGGCAGTGG+AGG | 0.484614 | 7_4:-61906770 | Msa1168990:CDS |
| GTAACCACCGCCGCCGCCAC+CGG | 0.485366 | 7_4:+61905191 | None:intergenic |
| CTGATCATGATGTTGCTACA+AGG | 0.485535 | 7_4:-61907107 | Msa1168990:intron |
| GGTGGAGGCTTTCCCGGTGG+CGG | 0.486071 | 7_4:-61905204 | Msa1168990:CDS |
| CATAATGTACATCTTCATCT+TGG | 0.494888 | 7_4:-61906706 | Msa1168990:CDS |
| TTCAGAAGCATACCTTTCCC+AGG | 0.497787 | 7_4:-61908151 | Msa1168990:CDS |
| GGTGGCAGTGGAGGAATTCA+AGG | 0.501651 | 7_4:-61906761 | Msa1168990:CDS |
| TATGTAAACAAATAGTGTAA+TGG | 0.510193 | 7_4:+61904858 | None:intergenic |
| GGTGGAGGTTTCAATCCATT+CGG | 0.510505 | 7_4:-61905273 | Msa1168990:CDS |
| TGAAGTTGGCTGACTCATAG+AGG | 0.510931 | 7_4:+61907490 | None:intergenic |
| GTTGTTACCTTAGTGCATGC+TGG | 0.513136 | 7_4:+61907423 | None:intergenic |
| GGGAGAAGCTAAACTCTTGA+CGG | 0.513362 | 7_4:-61906373 | Msa1168990:CDS |
| GGTTTCAATCCATTCGGTGG+TGG | 0.522209 | 7_4:-61905267 | Msa1168990:CDS |
| GGTTGTTGAGGTAAATACTT+AGG | 0.523924 | 7_4:-61905055 | Msa1168990:three_prime_UTR |
| TTGCTTTGTGATAAAAGTGA+TGG | 0.524348 | 7_4:-61904976 | Msa1168990:three_prime_UTR |
| GACCTTGAAGAATCAGGAAT+GGG | 0.528456 | 7_4:-61905306 | Msa1168990:CDS |
| GTGGTCCCTTGAGGAAATCA+AGG | 0.531579 | 7_4:+61905108 | None:intergenic |
| TAACCACCGCCGCCGCCACC+GGG | 0.533943 | 7_4:+61905192 | None:intergenic |
| TGCTTTGTGATAAAAGTGAT+GGG | 0.536961 | 7_4:-61904975 | Msa1168990:three_prime_UTR |
| AGGGTTGAATAATGACAAGT+TGG | 0.541100 | 7_4:+61909776 | None:intergenic |
| AAGCATCTCGAAGTATAAAA+GGG | 0.546866 | 7_4:-61908233 | Msa1168990:CDS |
| GGATAAGAATGTTGACAAAA+GGG | 0.547327 | 7_4:-61905647 | Msa1168990:CDS |
| TTTCTCTCCAGCATGCACTA+AGG | 0.557072 | 7_4:-61907430 | Msa1168990:intron |
| GGACCTTGAAGAATCAGGAA+TGG | 0.557178 | 7_4:-61905307 | Msa1168990:CDS |
| ATGCGAGTAAGGGCAAGCTA+CGG | 0.560599 | 7_4:-61906783 | Msa1168990:CDS |
| TGCGAGTAAGGGCAAGCTAC+GGG | 0.563487 | 7_4:-61906782 | Msa1168990:CDS |
| TGTAAAGTGCTAGTCAGGCT+TGG | 0.567833 | 7_4:-61906679 | Msa1168990:CDS |
| GAAAATCGCTGCTGCATACG+AGG | 0.567851 | 7_4:-61905601 | Msa1168990:intron |
| ATATTCAGGCATTACCAGAA+AGG | 0.568306 | 7_4:-61907003 | Msa1168990:intron |
| CTATAGCCTTGATTTCCTCA+AGG | 0.568901 | 7_4:-61905114 | Msa1168990:three_prime_UTR |
| CTTGCGAAGAACTGAAGCCT+GGG | 0.570619 | 7_4:+61908134 | None:intergenic |
| TGCTGTCCACCACCACCGAA+TGG | 0.571837 | 7_4:+61905258 | None:intergenic |
| TTTAAAGATCAGCAAACGCA+AGG | 0.572466 | 7_4:-61905758 | Msa1168990:CDS |
| AGGCTAAGCTTCTTAAAGTG+AGG | 0.576851 | 7_4:-61907248 | Msa1168990:CDS |
| TATAGCCTTGATTTCCTCAA+GGG | 0.579509 | 7_4:-61905113 | Msa1168990:three_prime_UTR |
| CCACCGCATAAAACTTTATG+GGG | 0.582040 | 7_4:+61904917 | None:intergenic |
| TAAACTCTTGACGGAAGACT+GGG | 0.583293 | 7_4:-61906364 | Msa1168990:CDS |
| GTTGACTAATCACTTGCTAA+CGG | 0.585750 | 7_4:-61905076 | Msa1168990:three_prime_UTR |
| GAAGAATCAGGAATGGGTGG+CGG | 0.587103 | 7_4:-61905300 | Msa1168990:CDS |
| GTGATAAAAGTGATGGGGAT+AGG | 0.590010 | 7_4:-61904969 | Msa1168990:three_prime_UTR |
| GTGCTAGTCAGGCTTGGCAG+AGG | 0.590572 | 7_4:-61906673 | Msa1168990:CDS |
| TATACCTGAAGCAGAAACAA+AGG | 0.591247 | 7_4:+61909756 | None:intergenic |
| AAGTTTCTGGAGTTAAAACC+CGG | 0.592058 | 7_4:-61907582 | Msa1168990:CDS |
| TTTGATGGTGGCTTCCCTGG+TGG | 0.596620 | 7_4:-61905222 | Msa1168990:CDS |
| GGGATAGGTGTTAGTTAAGG+AGG | 0.596798 | 7_4:-61904954 | Msa1168990:three_prime_UTR |
| TCACTTGCTAACGGTTGTTG+AGG | 0.598288 | 7_4:-61905067 | Msa1168990:three_prime_UTR |
| ATTAGTCAACATTATAGATG+TGG | 0.600096 | 7_4:+61905089 | None:intergenic |
| ATACCTGAAGCAGAAACAAA+GGG | 0.600717 | 7_4:+61909757 | None:intergenic |
| GAAGAACTGAAGCCTGGGAA+AGG | 0.605583 | 7_4:+61908139 | None:intergenic |
| ATTATAGATGTGGTCCCTTG+AGG | 0.607468 | 7_4:+61905099 | None:intergenic |
| GGAGGTTTCAATCCATTCGG+TGG | 0.610043 | 7_4:-61905270 | Msa1168990:CDS |
| CATTATGTGCAAGATGGTCA+GGG | 0.612509 | 7_4:+61906722 | None:intergenic |
| CTTGTCTTGCAAGCAACTTG+GGG | 0.613305 | 7_4:+61905028 | None:intergenic |
| ACAAGAAACTTGCCTTACAA+TGG | 0.614939 | 7_4:-61905675 | Msa1168990:CDS |
| ATATTCGTGAAGCATTAATG+AGG | 0.615631 | 7_4:-61905792 | Msa1168990:CDS |
| GCTGAAGATAATGCGAGTAA+GGG | 0.618327 | 7_4:-61906793 | Msa1168990:CDS |
| CTTGAAGAATCAGGAATGGG+TGG | 0.620295 | 7_4:-61905303 | Msa1168990:CDS |
| GGGAAAGGTATGCTTCTGAA+AGG | 0.621313 | 7_4:+61908154 | None:intergenic |
| TATTCGTGAAGCATTAATGA+GGG | 0.627259 | 7_4:-61905791 | Msa1168990:CDS |
| CCTGGTGGAGGCTTTCCCGG+TGG | 0.627865 | 7_4:-61905207 | Msa1168990:CDS |
| AACGCACAAGATACGACCAA+GGG | 0.630643 | 7_4:-61905332 | Msa1168990:CDS |
| TGACAAAAGGGAAGAAGCAG+AGG | 0.631426 | 7_4:-61905635 | Msa1168990:CDS |
| GCCTGACTAGCACTTTACAC+AGG | 0.631954 | 7_4:+61906683 | None:intergenic |
| ATGGATTCGGTGCCTTACAG+GGG | 0.639407 | 7_4:-61909841 | Msa1168990:CDS |
| GAAGTTGGCTGACTCATAGA+GGG | 0.643770 | 7_4:+61907491 | None:intergenic |
| GATGTACATTATGTGCAAGA+TGG | 0.649387 | 7_4:+61906716 | None:intergenic |
| CTCTTGACGGAAGACTGGGA+GGG | 0.651624 | 7_4:-61906360 | Msa1168990:CDS |
| ACTCTTGACGGAAGACTGGG+AGG | 0.654965 | 7_4:-61906361 | Msa1168990:CDS |
| AAACGCACAAGATACGACCA+AGG | 0.660195 | 7_4:-61905333 | Msa1168990:CDS |
| ACTTGCCTTACAATGGCACC+CGG | 0.661475 | 7_4:-61905668 | Msa1168990:CDS |
| AAGAAAACCAGACTCAGCAA+TGG | 0.664979 | 7_4:+61907194 | None:intergenic |
| CACCGGGAAAGCCTCCACCA+GGG | 0.665138 | 7_4:+61905208 | None:intergenic |
| CACAAGATACGACCAAGGGG+AGG | 0.668043 | 7_4:-61905328 | Msa1168990:CDS |
| GAGTAAGGGCAAGCTACGGG+TGG | 0.668740 | 7_4:-61906779 | Msa1168990:CDS |
| TTAGAGGCATTGTTGTTACG+TGG | 0.670478 | 7_4:-61907150 | Msa1168990:CDS |
| GCTTTGTGATAAAAGTGATG+GGG | 0.672562 | 7_4:-61904974 | Msa1168990:three_prime_UTR |
| ATATCTGATAAAGAGTATGA+GGG | 0.673598 | 7_4:-61907219 | Msa1168990:CDS |
| AAAAGGGAAACATTATACTG+AGG | 0.693246 | 7_4:-61908217 | Msa1168990:CDS |
| TGAAGCTCTTAAGATCGATG+AGG | 0.710564 | 7_4:-61906626 | Msa1168990:CDS |
| ACGCACAAGATACGACCAAG+GGG | 0.726879 | 7_4:-61905331 | Msa1168990:CDS |
| GTAGATATGAGCAATCTGAG+AGG | 0.737942 | 7_4:-61907614 | Msa1168990:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAACATTAAATCAAAAT+GGG | + | chr7_4:61905122-61905141 | None:intergenic | 10.0% |
| !! | AAATAAACATTAAATCAAAA+TGG | + | chr7_4:61905123-61905142 | None:intergenic | 10.0% |
| !! | TAAAGATAAGAAATTTAATA+GGG | + | chr7_4:61905155-61905174 | None:intergenic | 10.0% |
| !! | TTAAAGATAAGAAATTTAAT+AGG | + | chr7_4:61905156-61905175 | None:intergenic | 10.0% |
| !!! | AAATTATGTGTTTATTTTAA+AGG | - | chr7_4:61905258-61905277 | Msa1168990:CDS | 10.0% |
| !!! | ATTTTATAGCTTTTATTTTT+TGG | - | chr7_4:61905411-61905430 | Msa1168990:intron | 10.0% |
| !!! | TTTTATAGCTTTTATTTTTT+GGG | - | chr7_4:61905412-61905431 | Msa1168990:intron | 10.0% |
| !!! | ATATGATAATGTTAATATTT+TGG | - | chr7_4:61908949-61908968 | Msa1168990:intron | 10.0% |
| !!! | GCAAATAATTTTTTTTTTAA+TGG | - | chr7_4:61909339-61909358 | Msa1168990:intron | 10.0% |
| !! | TACAAAAAAAAAAAAATGGT+TGG | + | chr7_4:61905087-61905106 | None:intergenic | 15.0% |
| !! | ATAAACATTAAATCAAAATG+GGG | + | chr7_4:61905121-61905140 | None:intergenic | 15.0% |
| !! | AAAGATAAGAAATTTAATAG+GGG | + | chr7_4:61905154-61905173 | None:intergenic | 15.0% |
| !! | CATTTATCATAAAATGAAAA+GGG | - | chr7_4:61905943-61905962 | Msa1168990:intron | 15.0% |
| !! | AAATATAATCTAATTCAAAC+AGG | - | chr7_4:61906329-61906348 | Msa1168990:CDS | 15.0% |
| !! | AAACTAATATCTTAAAGTAT+AGG | + | chr7_4:61907045-61907064 | None:intergenic | 15.0% |
| !!! | ATCAAAAAAAAATTTTTGCT+AGG | + | chr7_4:61908306-61908325 | None:intergenic | 15.0% |
| !! | GTATGATTAAATTAGAATAT+TGG | - | chr7_4:61908547-61908566 | Msa1168990:intron | 15.0% |
| !! | AATATTTGCAATAAAACTTT+AGG | - | chr7_4:61908884-61908903 | Msa1168990:intron | 15.0% |
| !!! | ATGAATATTTTGTTGAATAA+CGG | - | chr7_4:61909410-61909429 | Msa1168990:intron | 15.0% |
| !!! | ATAGAATTTTGAAATCATTG+AGG | - | chr7_4:61904898-61904917 | Msa1168990:three_prime_UTR | 20.0% |
| !!! | CAAATTCAGAGTTTATTTTT+GGG | + | chr7_4:61905535-61905554 | None:intergenic | 20.0% |
| !!! | ACAAATTCAGAGTTTATTTT+TGG | + | chr7_4:61905536-61905555 | None:intergenic | 20.0% |
| !! | TAGTTATAGAATTAGTAAAG+TGG | + | chr7_4:61905762-61905781 | None:intergenic | 20.0% |
| !!! | CCTTTTCATTTTATGATAAA+TGG | + | chr7_4:61905945-61905964 | None:intergenic | 20.0% |
| !! | CCATTTATCATAAAATGAAA+AGG | - | chr7_4:61905942-61905961 | Msa1168990:intron | 20.0% |
| !! | CACTTCTAATAAAAGATATA+TGG | + | chr7_4:61906076-61906095 | None:intergenic | 20.0% |
| !! | GGTATATAGTATAGTATATA+AGG | - | chr7_4:61906201-61906220 | Msa1168990:intron | 20.0% |
| !!! | ATTTTGCCAAAAGTTTTTAA+GGG | + | chr7_4:61906275-61906294 | None:intergenic | 20.0% |
| !!! | AATTTTGCCAAAAGTTTTTA+AGG | + | chr7_4:61906276-61906295 | None:intergenic | 20.0% |
| !! | TCTTAAAGTATAGGATTTAT+GGG | + | chr7_4:61907036-61907055 | None:intergenic | 20.0% |
| !! | ATCTTAAAGTATAGGATTTA+TGG | + | chr7_4:61907037-61907056 | None:intergenic | 20.0% |
| !! | AGGAATAGAAAGTAAATTTA+TGG | + | chr7_4:61907424-61907443 | None:intergenic | 20.0% |
| !! | GAAAATAATGCATATAAAGT+TGG | + | chr7_4:61907533-61907552 | None:intergenic | 20.0% |
| !!! | TTATATGCATTATTTTCTTC+AGG | - | chr7_4:61907536-61907555 | Msa1168990:CDS | 20.0% |
| !! | CAGGATAATATTAGAAAAAT+TGG | + | chr7_4:61907764-61907783 | None:intergenic | 20.0% |
| !! | GAAATTTGAACAATATATCA+GGG | + | chr7_4:61907911-61907930 | None:intergenic | 20.0% |
| !! | AGAAATTTGAACAATATATC+AGG | + | chr7_4:61907912-61907931 | None:intergenic | 20.0% |
| !!! | TTTTTCATCATTCTTTCTTT+TGG | - | chr7_4:61907951-61907970 | Msa1168990:intron | 20.0% |
| !!! | TTTTCATCATTCTTTCTTTT+GGG | - | chr7_4:61907952-61907971 | Msa1168990:intron | 20.0% |
| !!! | TATTTCTTTGTTTTCCATAA+AGG | - | chr7_4:61907989-61908008 | Msa1168990:intron | 20.0% |
| !!! | AAAATCACAAGTTTTTTTCT+GGG | - | chr7_4:61908276-61908295 | Msa1168990:intron | 20.0% |
| !!! | AAAAAAAATTTTTGCTAGGA+GGG | + | chr7_4:61908302-61908321 | None:intergenic | 20.0% |
| !!! | AAAAAAAAATTTTTGCTAGG+AGG | + | chr7_4:61908303-61908322 | None:intergenic | 20.0% |
| !! | AATTCAATATATATTACCTG+AGG | + | chr7_4:61908507-61908526 | None:intergenic | 20.0% |
| !! | AATGCAAGAAATAAATAACA+AGG | + | chr7_4:61908640-61908659 | None:intergenic | 20.0% |
| !!! | ATATATATACCATGCTTTTT+TGG | - | chr7_4:61909304-61909323 | Msa1168990:intron | 20.0% |
| !! | TCAACAAAATATTCATATCT+AGG | + | chr7_4:61909406-61909425 | None:intergenic | 20.0% |
| !!! | TGAATATTTTGTTGAATAAC+GGG | - | chr7_4:61909411-61909430 | Msa1168990:intron | 20.0% |
| !!! | TTACGAATTTCATTTTTGAT+TGG | - | chr7_4:61909632-61909651 | Msa1168990:intron | 20.0% |
| !!! | TTGATCCTTAAATTTTTCTT+AGG | - | chr7_4:61909662-61909681 | Msa1168990:intron | 20.0% |
| !!! | TGATCCTTAAATTTTTCTTA+GGG | - | chr7_4:61909663-61909682 | Msa1168990:intron | 20.0% |
| !! | TATGTAAACAAATAGTGTAA+TGG | + | chr7_4:61909949-61909968 | None:intergenic | 20.0% |
| ! | ATCTCAATGCTTAATCTTAT+TGG | - | chr7_4:61904924-61904943 | Msa1168990:three_prime_UTR | 25.0% |
| ! | ACAACACAAATAAAAACCTA+AGG | + | chr7_4:61905238-61905257 | None:intergenic | 25.0% |
| ! | TGTAGTTTGAATTTGAACAT+TGG | - | chr7_4:61905449-61905468 | Msa1168990:intron | 25.0% |
| ! | TTTCTATATACCATTCAAAC+AGG | + | chr7_4:61905502-61905521 | None:intergenic | 25.0% |
| ! | AATGGTATATAGAAAGAGTT+AGG | - | chr7_4:61905507-61905526 | Msa1168990:intron | 25.0% |
| ! | TAAACCATAGCATAAAACAA+CGG | + | chr7_4:61905880-61905899 | None:intergenic | 25.0% |
| ! | TATCAACGAAATACAGTATT+TGG | + | chr7_4:61905998-61906017 | None:intergenic | 25.0% |
| ! | AAATACTGTATTTCGTTGAT+AGG | - | chr7_4:61905997-61906016 | Msa1168990:intron | 25.0% |
| ! | TATAGTGCAATTAACAAACT+TGG | + | chr7_4:61906177-61906196 | None:intergenic | 25.0% |
| ! | TTGTTAATTGCACTATATTG+TGG | - | chr7_4:61906180-61906199 | Msa1168990:intron | 25.0% |
| !! | TAGTATATAAGGTCTTGTAT+TGG | - | chr7_4:61906212-61906231 | Msa1168990:intron | 25.0% |
| !!! | TTTTGCCAAAAGTTTTTAAG+GGG | + | chr7_4:61906274-61906293 | None:intergenic | 25.0% |
| !!! | TGGGAGTATTATTTTTTAGT+GGG | + | chr7_4:61906416-61906435 | None:intergenic | 25.0% |
| !!! | TTGGGAGTATTATTTTTTAG+TGG | + | chr7_4:61906417-61906436 | None:intergenic | 25.0% |
| ! | AAGTAATAAAGTTAGGACTT+GGG | + | chr7_4:61906435-61906454 | None:intergenic | 25.0% |
| ! | TCTAGAGAAGTAATAAAGTT+AGG | + | chr7_4:61906442-61906461 | None:intergenic | 25.0% |
| ! | TTTCCAATTTCTGTTTCATA+AGG | - | chr7_4:61906785-61906804 | Msa1168990:CDS | 25.0% |
| ! | TATCCTTATGAAACAGAAAT+TGG | + | chr7_4:61906791-61906810 | None:intergenic | 25.0% |
| ! | TTAAAGTATAGGATTTATGG+GGG | + | chr7_4:61907034-61907053 | None:intergenic | 25.0% |
| ! | CTTAAAGTATAGGATTTATG+GGG | + | chr7_4:61907035-61907054 | None:intergenic | 25.0% |
| ! | AATGATATCACTATCCAATT+AGG | + | chr7_4:61907152-61907171 | None:intergenic | 25.0% |
| ! | AGAAAGTAAATTTATGGATG+TGG | + | chr7_4:61907418-61907437 | None:intergenic | 25.0% |
| !! | ATATCTGATAAAGAGTATGA+GGG | - | chr7_4:61907585-61907604 | Msa1168990:CDS | 25.0% |
| ! | AATATTATCCTGCTTATATG+TGG | - | chr7_4:61907772-61907791 | Msa1168990:intron | 25.0% |
| ! | ATATTATCCTGCTTATATGT+GGG | - | chr7_4:61907773-61907792 | Msa1168990:intron | 25.0% |
| !!! | CAAAATCACAAGTTTTTTTC+TGG | - | chr7_4:61908275-61908294 | Msa1168990:intron | 25.0% |
| ! | TTGCACATAATTACTTATCT+TGG | - | chr7_4:61908391-61908410 | Msa1168990:intron | 25.0% |
| ! | GAAAAGAAAAAAAAACTACC+AGG | + | chr7_4:61908789-61908808 | None:intergenic | 25.0% |
| ! | TATATTAGAAAATACCTGCA+CGG | - | chr7_4:61908828-61908847 | Msa1168990:intron | 25.0% |
| !! | CAAGGATTATTACAAGATTT+TGG | - | chr7_4:61909064-61909083 | Msa1168990:intron | 25.0% |
| ! | GAGTTATAATAGGATTCATT+TGG | - | chr7_4:61909375-61909394 | Msa1168990:intron | 25.0% |
| !!! | CAATTTCACTTTACTTTTGA+TGG | - | chr7_4:61909567-61909586 | Msa1168990:intron | 25.0% |
| ! | ATTAGTCAACATTATAGATG+TGG | + | chr7_4:61909718-61909737 | None:intergenic | 25.0% |
| AAATGGTTGGAAAGAAATGA+AGG | + | chr7_4:61905074-61905093 | None:intergenic | 30.0% | |
| !!! | TTTGATCCAACTTTGTTTTG+TGG | - | chr7_4:61905179-61905198 | Msa1168990:CDS | 30.0% |
| !!! | TTGATCCAACTTTGTTTTGT+GGG | - | chr7_4:61905180-61905199 | Msa1168990:CDS | 30.0% |
| TGAATTGGTTGGATTTATTG+AGG | - | chr7_4:61905388-61905407 | Msa1168990:intron | 30.0% | |
| TTTAGTATGACCTGTTTGAA+TGG | - | chr7_4:61905489-61905508 | Msa1168990:intron | 30.0% | |
| !! | AGTTTGTTAGCTAAGATAGT+AGG | + | chr7_4:61905702-61905721 | None:intergenic | 30.0% |
| AATCTCATATGATGTCATTG+TGG | + | chr7_4:61905825-61905844 | None:intergenic | 30.0% | |
| !! | TTTTCCGTTGTTTTATGCTA+TGG | - | chr7_4:61905873-61905892 | Msa1168990:intron | 30.0% |
| ! | TATTTCGTTGATAGGCATTA+TGG | - | chr7_4:61906005-61906024 | Msa1168990:intron | 30.0% |
| ! | ATCGCTACAAAGTGAAATTT+TGG | - | chr7_4:61906124-61906143 | Msa1168990:intron | 30.0% |
| !! | TGAATAAACTTGCTGTTAAG+AGG | + | chr7_4:61906300-61906319 | None:intergenic | 30.0% |
| GAAGTAATAAAGTTAGGACT+TGG | + | chr7_4:61906436-61906455 | None:intergenic | 30.0% | |
| ! | AAAGCATCTCGAAGTATAAA+AGG | - | chr7_4:61906570-61906589 | Msa1168990:intron | 30.0% |
| AAGCATCTCGAAGTATAAAA+GGG | - | chr7_4:61906571-61906590 | Msa1168990:intron | 30.0% | |
| AAAAGGGAAACATTATACTG+AGG | - | chr7_4:61906587-61906606 | Msa1168990:intron | 30.0% | |
| TACCAAACTTTCAAAAAGCA+CGG | + | chr7_4:61906735-61906754 | None:intergenic | 30.0% | |
| CTAACTTCAATAACGATAAG+GGG | + | chr7_4:61906864-61906883 | None:intergenic | 30.0% | |
| GCTAACTTCAATAACGATAA+GGG | + | chr7_4:61906865-61906884 | None:intergenic | 30.0% | |
| TGCTAACTTCAATAACGATA+AGG | + | chr7_4:61906866-61906885 | None:intergenic | 30.0% | |
| TAAAGTATAGGATTTATGGG+GGG | + | chr7_4:61907033-61907052 | None:intergenic | 30.0% | |
| ATTAGGAGTTTGAGTGATTT+GGG | + | chr7_4:61907135-61907154 | None:intergenic | 30.0% | |
| AATTAGGAGTTTGAGTGATT+TGG | + | chr7_4:61907136-61907155 | None:intergenic | 30.0% | |
| AAATCACTCAAACTCCTAAT+TGG | - | chr7_4:61907135-61907154 | Msa1168990:CDS | 30.0% | |
| ATTGGATAGTGATATCATTC+AGG | - | chr7_4:61907153-61907172 | Msa1168990:CDS | 30.0% | |
| ! | TTCCAAAGATTTTGTGAAGT+TGG | + | chr7_4:61907331-61907350 | None:intergenic | 30.0% |
| ACTTGTGTAATTGCTAATAC+AGG | + | chr7_4:61907444-61907463 | None:intergenic | 30.0% | |
| AAAGTTAATGCCCAAGTATT+GGG | - | chr7_4:61907467-61907486 | Msa1168990:CDS | 30.0% | |
| ! | GATATCTGATAAAGAGTATG+AGG | - | chr7_4:61907584-61907603 | Msa1168990:CDS | 30.0% |
| GGAAGATGAAAACAATTTAG+AGG | - | chr7_4:61907638-61907657 | Msa1168990:intron | 30.0% | |
| ATATGTGGGCATATATATTC+AGG | - | chr7_4:61907787-61907806 | Msa1168990:intron | 30.0% | |
| ! | GAACTGAAAAAAGCATACTT+TGG | - | chr7_4:61907849-61907868 | Msa1168990:intron | 30.0% |
| GAATGATGAAAAACTTGAGA+AGG | + | chr7_4:61907944-61907963 | None:intergenic | 30.0% | |
| CATAATGTACATCTTCATCT+TGG | - | chr7_4:61908098-61908117 | Msa1168990:intron | 30.0% | |
| TTCATATAGCATGTTTCACA+CGG | - | chr7_4:61908525-61908544 | Msa1168990:intron | 30.0% | |
| TGCATTTGTGTGTTTATTAG+AGG | - | chr7_4:61908654-61908673 | Msa1168990:intron | 30.0% | |
| TTGTGTGTTTATTAGAGGTT+TGG | - | chr7_4:61908659-61908678 | Msa1168990:intron | 30.0% | |
| TAATTCAGAATTGTCTGTTG+TGG | - | chr7_4:61908683-61908702 | Msa1168990:intron | 30.0% | |
| ! | ATATTCGTGAAGCATTAATG+AGG | - | chr7_4:61909012-61909031 | Msa1168990:intron | 30.0% |
| ! | TATTCGTGAAGCATTAATGA+GGG | - | chr7_4:61909013-61909032 | Msa1168990:intron | 30.0% |
| ! | TTTTGTCAACATTCTTATCC+GGG | + | chr7_4:61909157-61909176 | None:intergenic | 30.0% |
| ! | CTTTTGTCAACATTCTTATC+CGG | + | chr7_4:61909158-61909177 | None:intergenic | 30.0% |
| GGATAAGAATGTTGACAAAA+GGG | - | chr7_4:61909157-61909176 | Msa1168990:intron | 30.0% | |
| CTGAACAAGGAAAAGAAATA+AGG | + | chr7_4:61909249-61909268 | None:intergenic | 30.0% | |
| !! | TTTCACTTTACTTTTGATGG+TGG | - | chr7_4:61909570-61909589 | Msa1168990:intron | 30.0% |
| CTCTCCCTAAGAAAAATTTA+AGG | + | chr7_4:61909670-61909689 | None:intergenic | 30.0% | |
| TTGCTTTGTGATAAAAGTGA+TGG | - | chr7_4:61909828-61909847 | Msa1168990:CDS | 30.0% | |
| TGCTTTGTGATAAAAGTGAT+GGG | - | chr7_4:61909829-61909848 | Msa1168990:CDS | 30.0% | |
| TGGTTTCTCGTTGTTAACTA+TGG | - | chr7_4:61904944-61904963 | Msa1168990:three_prime_UTR | 35.0% | |
| CTCGTTGTTAACTATGGATT+CGG | - | chr7_4:61904950-61904969 | Msa1168990:three_prime_UTR | 35.0% | |
| AGGGTTGAATAATGACAAGT+TGG | + | chr7_4:61905031-61905050 | None:intergenic | 35.0% | |
| ATACCTGAAGCAGAAACAAA+GGG | + | chr7_4:61905050-61905069 | None:intergenic | 35.0% | |
| TATACCTGAAGCAGAAACAA+AGG | + | chr7_4:61905051-61905070 | None:intergenic | 35.0% | |
| ! | ATGACAGAACTCTAGTTTCA+AGG | - | chr7_4:61905598-61905617 | Msa1168990:intron | 35.0% |
| TGTTAGCTAAGATAGTAGGA+GGG | + | chr7_4:61905698-61905717 | None:intergenic | 35.0% | |
| TTGTTAGCTAAGATAGTAGG+AGG | + | chr7_4:61905699-61905718 | None:intergenic | 35.0% | |
| AATCTATTATGCGATACTCC+TGG | - | chr7_4:61905722-61905741 | Msa1168990:CDS | 35.0% | |
| ATCTATTATGCGATACTCCT+GGG | - | chr7_4:61905723-61905742 | Msa1168990:CDS | 35.0% | |
| ATTAATGCATTCCAGGAGAT+CGG | + | chr7_4:61905852-61905871 | None:intergenic | 35.0% | |
| GGAAAACATTAATGCATTCC+AGG | + | chr7_4:61905859-61905878 | None:intergenic | 35.0% | |
| CATAAAATGAAAAGGGCAAG+TGG | - | chr7_4:61905950-61905969 | Msa1168990:intron | 35.0% | |
| AAGTGGCATCACATAATAGT+GGG | - | chr7_4:61905967-61905986 | Msa1168990:intron | 35.0% | |
| GTGATGATTCAGTGTTAAAG+TGG | - | chr7_4:61906474-61906493 | Msa1168990:intron | 35.0% | |
| AGATCAGAACCAAAAAAGAC+TGG | + | chr7_4:61906514-61906533 | None:intergenic | 35.0% | |
| !!! | AGTCTTTTTTGGTTCTGATC+TGG | - | chr7_4:61906513-61906532 | Msa1168990:intron | 35.0% |
| ! | ACCAAACTTTCAAAAAGCAC+GGG | + | chr7_4:61906734-61906753 | None:intergenic | 35.0% |
| TTAGGAGTTTGAGTGATTTG+GGG | + | chr7_4:61907134-61907153 | None:intergenic | 35.0% | |
| ! | TGATATCATTCAGGTGCTTT+TGG | - | chr7_4:61907162-61907181 | Msa1168990:CDS | 35.0% |
| !! | AAGTTTCTGGAGTTAAAACC+CGG | - | chr7_4:61907222-61907241 | Msa1168990:CDS | 35.0% |
| ! | TTTTCTGCAATTGAATGTCC+GGG | + | chr7_4:61907243-61907262 | None:intergenic | 35.0% |
| ! | CTTTTCTGCAATTGAATGTC+CGG | + | chr7_4:61907244-61907263 | None:intergenic | 35.0% |
| AGCCAACTTCACAAAATCTT+TGG | - | chr7_4:61907326-61907345 | Msa1168990:intron | 35.0% | |
| GAAAGTTAATGCCCAAGTAT+TGG | - | chr7_4:61907466-61907485 | Msa1168990:CDS | 35.0% | |
| TTGTCTTGTGGAAATGATGT+TGG | - | chr7_4:61907721-61907740 | Msa1168990:intron | 35.0% | |
| ATATATGCCCACATATAAGC+AGG | + | chr7_4:61907783-61907802 | None:intergenic | 35.0% | |
| ATATTCAGGCATTACCAGAA+AGG | - | chr7_4:61907801-61907820 | Msa1168990:intron | 35.0% | |
| !! | TTTTTCAGTTCACTATGCTC+AGG | + | chr7_4:61907840-61907859 | None:intergenic | 35.0% |
| !!! | TCTTTTGGGTGTTGATGATT+CGG | - | chr7_4:61907966-61907985 | Msa1168990:intron | 35.0% |
| GATGTACATTATGTGCAAGA+TGG | + | chr7_4:61908091-61908110 | None:intergenic | 35.0% | |
| ACTTATTGATGCTCTTGTTC+AGG | - | chr7_4:61908202-61908221 | Msa1168990:CDS | 35.0% | |
| CAAATGAAACACAAGACACA+AGG | + | chr7_4:61908248-61908267 | None:intergenic | 35.0% | |
| !! | GATCTAAGTCTTGTTTGAGT+AGG | - | chr7_4:61908323-61908342 | Msa1168990:intron | 35.0% |
| !! | TAAGTCTTGTTTGAGTAGGA+TGG | - | chr7_4:61908327-61908346 | Msa1168990:intron | 35.0% |
| CAAATTCGAAAAGCTTCAAG+GGG | + | chr7_4:61908739-61908758 | None:intergenic | 35.0% | |
| GCAAATTCGAAAAGCTTCAA+GGG | + | chr7_4:61908740-61908759 | None:intergenic | 35.0% | |
| TAGTAGTTGTCTATAACTGC+AGG | - | chr7_4:61908983-61909002 | Msa1168990:intron | 35.0% | |
| TTTAAAGATCAGCAAACGCA+AGG | - | chr7_4:61909046-61909065 | Msa1168990:intron | 35.0% | |
| ACAAGAAACTTGCCTTACAA+TGG | - | chr7_4:61909129-61909148 | Msa1168990:intron | 35.0% | |
| CGGATAAGAATGTTGACAAA+AGG | - | chr7_4:61909156-61909175 | Msa1168990:intron | 35.0% | |
| TCCTTGTTCAGACTTTAATC+AGG | - | chr7_4:61909258-61909277 | Msa1168990:intron | 35.0% | |
| TCCTGATTAAAGTCTGAACA+AGG | + | chr7_4:61909262-61909281 | None:intergenic | 35.0% | |
| CAAAACTAGCCAAAAAAGCA+TGG | + | chr7_4:61909316-61909335 | None:intergenic | 35.0% | |
| !!! | CATGCTTTTTTGGCTAGTTT+TGG | - | chr7_4:61909314-61909333 | Msa1168990:intron | 35.0% |
| !! | TTTTAATGGACGCTTAACTG+CGG | - | chr7_4:61909353-61909372 | Msa1168990:intron | 35.0% |
| CTTAACTGCGGAGTTATAAT+AGG | - | chr7_4:61909365-61909384 | Msa1168990:intron | 35.0% | |
| ! | TATAGCCTTGATTTCCTCAA+GGG | - | chr7_4:61909691-61909710 | Msa1168990:intron | 35.0% |
| ! | GTTGACTAATCACTTGCTAA+CGG | - | chr7_4:61909728-61909747 | Msa1168990:intron | 35.0% |
| GGTTGTTGAGGTAAATACTT+AGG | - | chr7_4:61909749-61909768 | Msa1168990:intron | 35.0% | |
| GCTTTGTGATAAAAGTGATG+GGG | - | chr7_4:61909830-61909849 | Msa1168990:CDS | 35.0% | |
| !! | TAGCCCCATAAAGTTTTATG+CGG | - | chr7_4:61909884-61909903 | Msa1168990:CDS | 35.0% |
| ACCACCGCATAAAACTTTAT+GGG | + | chr7_4:61909891-61909910 | None:intergenic | 35.0% | |
| AACCACCGCATAAAACTTTA+TGG | + | chr7_4:61909892-61909911 | None:intergenic | 35.0% | |
| ACAAATAGTGTAATGGTTGC+TGG | + | chr7_4:61909942-61909961 | None:intergenic | 35.0% | |
| ATCGACCCACAAAACAAAGT+TGG | + | chr7_4:61905188-61905207 | None:intergenic | 40.0% | |
| ! | TTTTCATCACTCTCAGCCTT+AGG | - | chr7_4:61905219-61905238 | Msa1168990:CDS | 40.0% |
| AGCATGTTGCATGAATTGGT+TGG | - | chr7_4:61905377-61905396 | Msa1168990:intron | 40.0% | |
| ACATTGGAAACTAGAGAGAG+AGG | - | chr7_4:61905465-61905484 | Msa1168990:intron | 40.0% | |
| CATTGGAAACTAGAGAGAGA+GGG | - | chr7_4:61905466-61905485 | Msa1168990:intron | 40.0% | |
| AGCACTAGCTCGTTTGTAAA+GGG | + | chr7_4:61905632-61905651 | None:intergenic | 40.0% | |
| AAGCACTAGCTCGTTTGTAA+AGG | + | chr7_4:61905633-61905652 | None:intergenic | 40.0% | |
| CTCATATGATGTCATTGTGG+AGG | + | chr7_4:61905822-61905841 | None:intergenic | 40.0% | |
| !!! | TGAGATTTTTTCCGATCTCC+TGG | - | chr7_4:61905838-61905857 | Msa1168990:intron | 40.0% |
| ACGTATGCAAGATCGACTAA+TGG | + | chr7_4:61905917-61905936 | None:intergenic | 40.0% | |
| CAAGTGGCATCACATAATAG+TGG | - | chr7_4:61905966-61905985 | Msa1168990:intron | 40.0% | |
| ! | TGGTTTGAGTTCATCAGAAG+AGG | - | chr7_4:61906025-61906044 | Msa1168990:intron | 40.0% |
| TTGAGTTCATCAGAAGAGGA+TGG | - | chr7_4:61906029-61906048 | Msa1168990:intron | 40.0% | |
| ! | GAGCTCCCCTTAAAAACTTT+TGG | - | chr7_4:61906266-61906285 | Msa1168990:intron | 40.0% |
| CAGCAAGTTTATTCAGTTCG+TGG | - | chr7_4:61906305-61906324 | Msa1168990:intron | 40.0% | |
| CACTGAATCATCACATTCAC+AGG | + | chr7_4:61906468-61906487 | None:intergenic | 40.0% | |
| ! | AGAACCAAAAAAGACTGGTC+AGG | + | chr7_4:61906509-61906528 | None:intergenic | 40.0% |
| !!! | CTTTTTTGGTTCTGATCTGG+TGG | - | chr7_4:61906516-61906535 | Msa1168990:intron | 40.0% |
| ! | AGGTATGCTTCTGAAAGGTT+TGG | + | chr7_4:61906648-61906667 | None:intergenic | 40.0% |
| ! | CCAAACTTTCAAAAAGCACG+GGG | + | chr7_4:61906733-61906752 | None:intergenic | 40.0% |
| !!! | ATTAGTTTTCCTCCTTCGTC+CGG | - | chr7_4:61906947-61906966 | Msa1168990:CDS | 40.0% |
| TGAACTAAGGGATAAGGAGT+TGG | + | chr7_4:61906991-61907010 | None:intergenic | 40.0% | |
| ! | CTGGTTTGAACTAAGGGATA+AGG | + | chr7_4:61906997-61907016 | None:intergenic | 40.0% |
| !! | GCTGAACTGGTTTGAACTAA+GGG | + | chr7_4:61907003-61907022 | None:intergenic | 40.0% |
| !! | AGCTGAACTGGTTTGAACTA+AGG | + | chr7_4:61907004-61907023 | None:intergenic | 40.0% |
| TATAGGATTTATGGGGGGTT+GGG | + | chr7_4:61907028-61907047 | None:intergenic | 40.0% | |
| ! | TTTGAGTGATTTGGGGTGAT+GGG | + | chr7_4:61907127-61907146 | None:intergenic | 40.0% |
| GTAGATATGAGCAATCTGAG+AGG | - | chr7_4:61907190-61907209 | Msa1168990:CDS | 40.0% | |
| GAGGAGCTACAAAAAGTTTC+TGG | - | chr7_4:61907209-61907228 | Msa1168990:CDS | 40.0% | |
| CGGACATTCAATTGCAGAAA+AGG | - | chr7_4:61907242-61907261 | Msa1168990:CDS | 40.0% | |
| !! | TAATGCCCAAGTATTGGGTT+TGG | - | chr7_4:61907472-61907491 | Msa1168990:CDS | 40.0% |
| !! | AATGCCCAAGTATTGGGTTT+GGG | - | chr7_4:61907473-61907492 | Msa1168990:CDS | 40.0% |
| AGGCTAAGCTTCTTAAAGTG+AGG | - | chr7_4:61907556-61907575 | Msa1168990:CDS | 40.0% | |
| AAGAAAACCAGACTCAGCAA+TGG | + | chr7_4:61907613-61907632 | None:intergenic | 40.0% | |
| !!! | TGAGTCTGGTTTTCTTCTCA+AGG | - | chr7_4:61907617-61907636 | Msa1168990:intron | 40.0% |
| !! | TTAGAGGCATTGTTGTTACG+TGG | - | chr7_4:61907654-61907673 | Msa1168990:intron | 40.0% |
| CTGATCATGATGTTGCTACA+AGG | - | chr7_4:61907697-61907716 | Msa1168990:intron | 40.0% | |
| TTGCTACAAGGTTTGTCTTG+TGG | - | chr7_4:61907709-61907728 | Msa1168990:intron | 40.0% | |
| CGCATTATCTTCAGCCTTTA+TGG | + | chr7_4:61908006-61908025 | None:intergenic | 40.0% | |
| GCTGAAGATAATGCGAGTAA+GGG | - | chr7_4:61908011-61908030 | Msa1168990:intron | 40.0% | |
| CATTATGTGCAAGATGGTCA+GGG | + | chr7_4:61908085-61908104 | None:intergenic | 40.0% | |
| ACATTATGTGCAAGATGGTC+AGG | + | chr7_4:61908086-61908105 | None:intergenic | 40.0% | |
| AGCTTCACTACAACTGTTCA+AGG | + | chr7_4:61908165-61908184 | None:intergenic | 40.0% | |
| TGAAGCTCTTAAGATCGATG+AGG | - | chr7_4:61908178-61908197 | Msa1168990:CDS | 40.0% | |
| ! | TTGGTGTTCCTTGTTGTAGA+GGG | - | chr7_4:61908410-61908429 | Msa1168990:intron | 40.0% |
| TAAACTCTTGACGGAAGACT+GGG | - | chr7_4:61908440-61908459 | Msa1168990:intron | 40.0% | |
| CGCAAATTCGAAAAGCTTCA+AGG | + | chr7_4:61908741-61908760 | None:intergenic | 40.0% | |
| ! | CAGGAGCATGAAATGAAACA+TGG | + | chr7_4:61908770-61908789 | None:intergenic | 40.0% |
| CATGTTTCATTTCATGCTCC+TGG | - | chr7_4:61908768-61908787 | Msa1168990:intron | 40.0% | |
| AATGACAATGTTAACCGTGC+AGG | + | chr7_4:61908845-61908864 | None:intergenic | 40.0% | |
| GACCTTGAAGAATCAGGAAT+GGG | - | chr7_4:61909498-61909517 | Msa1168990:intron | 40.0% | |
| ! | CTATAGCCTTGATTTCCTCA+AGG | - | chr7_4:61909690-61909709 | Msa1168990:intron | 40.0% |
| ATTATAGATGTGGTCCCTTG+AGG | + | chr7_4:61909708-61909727 | None:intergenic | 40.0% | |
| TCTTGTCTTGCAAGCAACTT+GGG | + | chr7_4:61909780-61909799 | None:intergenic | 40.0% | |
| ! | GTGATAAAAGTGATGGGGAT+AGG | - | chr7_4:61909835-61909854 | Msa1168990:CDS | 40.0% |
| ATGGGGATAGGTGTTAGTTA+AGG | - | chr7_4:61909847-61909866 | Msa1168990:CDS | 40.0% | |
| CCACCGCATAAAACTTTATG+GGG | + | chr7_4:61909890-61909909 | None:intergenic | 40.0% | |
| !! | TATGGATTCGGTGCCTTACA+GGG | - | chr7_4:61904962-61904981 | Msa1168990:three_prime_UTR | 45.0% |
| ! | GTCTGAAACAATCCCCTGTA+AGG | + | chr7_4:61904978-61904997 | None:intergenic | 45.0% |
| !! | CAACCCTTTGTTTCTGCTTC+AGG | - | chr7_4:61905044-61905063 | Msa1168990:three_prime_UTR | 45.0% |
| GTGCAGCATGTTGCATGAAT+TGG | - | chr7_4:61905373-61905392 | Msa1168990:intron | 45.0% | |
| GCACTAGCTCGTTTGTAAAG+GGG | + | chr7_4:61905631-61905650 | None:intergenic | 45.0% | |
| GACACACAAGGAAATCATGC+AGG | + | chr7_4:61905800-61905819 | None:intergenic | 45.0% | |
| AGTTCATCAGAAGAGGATGG+AGG | - | chr7_4:61906032-61906051 | Msa1168990:intron | 45.0% | |
| GTTCATCAGAAGAGGATGGA+GGG | - | chr7_4:61906033-61906052 | Msa1168990:intron | 45.0% | |
| TTCATCAGAAGAGGATGGAG+GGG | - | chr7_4:61906034-61906053 | Msa1168990:intron | 45.0% | |
| ! | TCTTGTATTGGCGTTGAAGC+TGG | - | chr7_4:61906224-61906243 | Msa1168990:intron | 45.0% |
| !!! | GTTGCCTGACCAGTCTTTTT+TGG | - | chr7_4:61906502-61906521 | Msa1168990:intron | 45.0% |
| TTCTGATCTGGTGGAAAACC+AGG | - | chr7_4:61906525-61906544 | Msa1168990:intron | 45.0% | |
| AACAACTCAGCTGCATTTCC+TGG | + | chr7_4:61906546-61906565 | None:intergenic | 45.0% | |
| ! | GGGAAAGGTATGCTTCTGAA+AGG | + | chr7_4:61906653-61906672 | None:intergenic | 45.0% |
| ! | TTCAGAAGCATACCTTTCCC+AGG | - | chr7_4:61906653-61906672 | Msa1168990:CDS | 45.0% |
| CAGTTCTTCGCAAGTTATGC+AGG | - | chr7_4:61906679-61906698 | Msa1168990:CDS | 45.0% | |
| ! | TTTCAAAAAGCACGGGGATG+GGG | + | chr7_4:61906727-61906746 | None:intergenic | 45.0% |
| ! | CTTTCAAAAAGCACGGGGAT+GGG | + | chr7_4:61906728-61906747 | None:intergenic | 45.0% |
| ! | ACTTTCAAAAAGCACGGGGA+TGG | + | chr7_4:61906729-61906748 | None:intergenic | 45.0% |
| !! | CCCCGTGCTTTTTGAAAGTT+TGG | - | chr7_4:61906730-61906749 | Msa1168990:CDS | 45.0% |
| ! | AAGGGGCAAAATGTTGCTTC+TGG | + | chr7_4:61906847-61906866 | None:intergenic | 45.0% |
| !! | TTAGTTTTCCTCCTTCGTCC+GGG | - | chr7_4:61906948-61906967 | Msa1168990:CDS | 45.0% |
| ACTAAGGGATAAGGAGTTGG+AGG | + | chr7_4:61906988-61907007 | None:intergenic | 45.0% | |
| GTATAGGATTTATGGGGGGT+TGG | + | chr7_4:61907029-61907048 | None:intergenic | 45.0% | |
| ! | TTGAGTGATTTGGGGTGATG+GGG | + | chr7_4:61907126-61907145 | None:intergenic | 45.0% |
| ! | GTTTGAGTGATTTGGGGTGA+TGG | + | chr7_4:61907128-61907147 | None:intergenic | 45.0% |
| ! | GAAGTTGGCTGACTCATAGA+GGG | + | chr7_4:61907316-61907335 | None:intergenic | 45.0% |
| ! | TGAAGTTGGCTGACTCATAG+AGG | + | chr7_4:61907317-61907336 | None:intergenic | 45.0% |
| TTTCTCTCCAGCATGCACTA+AGG | - | chr7_4:61907374-61907393 | Msa1168990:intron | 45.0% | |
| GTTGTTACCTTAGTGCATGC+TGG | + | chr7_4:61907384-61907403 | None:intergenic | 45.0% | |
| ACAGCCCAAACCCAATACTT+GGG | + | chr7_4:61907480-61907499 | None:intergenic | 45.0% | |
| GTTCACTATGCTCAGGATCT+AGG | + | chr7_4:61907833-61907852 | None:intergenic | 45.0% | |
| GGCTGAAGATAATGCGAGTA+AGG | - | chr7_4:61908010-61908029 | Msa1168990:intron | 45.0% | |
| ! | TGTAAAGTGCTAGTCAGGCT+TGG | - | chr7_4:61908125-61908144 | Msa1168990:intron | 45.0% |
| !! | CTTGGTGTTCCTTGTTGTAG+AGG | - | chr7_4:61908409-61908428 | Msa1168990:intron | 45.0% |
| ! | TGGTGTTCCTTGTTGTAGAG+GGG | - | chr7_4:61908411-61908430 | Msa1168990:intron | 45.0% |
| GGGAGAAGCTAAACTCTTGA+CGG | - | chr7_4:61908431-61908450 | Msa1168990:intron | 45.0% | |
| CTAAACTCTTGACGGAAGAC+TGG | - | chr7_4:61908439-61908458 | Msa1168990:intron | 45.0% | |
| AGCTGCTCAAAAATCTCCTC+AGG | - | chr7_4:61908488-61908507 | Msa1168990:intron | 45.0% | |
| TGACAAAAGGGAAGAAGCAG+AGG | - | chr7_4:61909169-61909188 | Msa1168990:intron | 45.0% | |
| ! | GTATGCAGCAGCGATTTTCT+CGG | + | chr7_4:61909202-61909221 | None:intergenic | 45.0% |
| ! | GGGTCGTTGCATTGTGTTTT+AGG | - | chr7_4:61909431-61909450 | Msa1168990:intron | 45.0% |
| AAACGCACAAGATACGACCA+AGG | - | chr7_4:61909471-61909490 | Msa1168990:intron | 45.0% | |
| AACGCACAAGATACGACCAA+GGG | - | chr7_4:61909472-61909491 | Msa1168990:intron | 45.0% | |
| GGACCTTGAAGAATCAGGAA+TGG | - | chr7_4:61909497-61909516 | Msa1168990:intron | 45.0% | |
| CACCCATTCCTGATTCTTCA+AGG | + | chr7_4:61909503-61909522 | None:intergenic | 45.0% | |
| CTTGAAGAATCAGGAATGGG+TGG | - | chr7_4:61909501-61909520 | Msa1168990:intron | 45.0% | |
| GGTGGAGGTTTCAATCCATT+CGG | - | chr7_4:61909531-61909550 | Msa1168990:intron | 45.0% | |
| ! | TCACTTGCTAACGGTTGTTG+AGG | - | chr7_4:61909737-61909756 | Msa1168990:intron | 45.0% |
| CTTGTCTTGCAAGCAACTTG+GGG | + | chr7_4:61909779-61909798 | None:intergenic | 45.0% | |
| GTCTTGTCTTGCAAGCAACT+TGG | + | chr7_4:61909781-61909800 | None:intergenic | 45.0% | |
| GGGATAGGTGTTAGTTAAGG+AGG | - | chr7_4:61909850-61909869 | Msa1168990:CDS | 45.0% | |
| !! | CCCCATAAAGTTTTATGCGG+TGG | - | chr7_4:61909887-61909906 | Msa1168990:CDS | 45.0% |
| ! | GCGGTGGTTGATACTTTGTA+AGG | - | chr7_4:61909903-61909922 | Msa1168990:CDS | 45.0% |
| !! | AAAATACAAAAAAAAAAAAA+TGG | + | chr7_4:61905091-61905110 | None:intergenic | 5.0% |
| !! | CTATGGATTCGGTGCCTTAC+AGG | - | chr7_4:61904961-61904980 | Msa1168990:three_prime_UTR | 50.0% |
| !! | ATGGATTCGGTGCCTTACAG+GGG | - | chr7_4:61904963-61904982 | Msa1168990:three_prime_UTR | 50.0% |
| GTCATTGTGGAGGACACACA+AGG | + | chr7_4:61905812-61905831 | None:intergenic | 50.0% | |
| GAAGAACTGAAGCCTGGGAA+AGG | + | chr7_4:61906668-61906687 | None:intergenic | 50.0% | |
| CTTGCGAAGAACTGAAGCCT+GGG | + | chr7_4:61906673-61906692 | None:intergenic | 50.0% | |
| ACTTGCGAAGAACTGAAGCC+TGG | + | chr7_4:61906674-61906693 | None:intergenic | 50.0% | |
| CTTCGCAAGTTATGCAGGTG+TGG | - | chr7_4:61906684-61906703 | Msa1168990:CDS | 50.0% | |
| GATAAGGAGTTGGAGGTCCT+GGG | + | chr7_4:61906981-61907000 | None:intergenic | 50.0% | |
| ! | TGAGAAGTGTGAGGGAAGGA+GGG | + | chr7_4:61907096-61907115 | None:intergenic | 50.0% |
| ! | ATGAGAAGTGTGAGGGAAGG+AGG | + | chr7_4:61907097-61907116 | None:intergenic | 50.0% |
| ! | GAGATGAGAAGTGTGAGGGA+AGG | + | chr7_4:61907100-61907119 | None:intergenic | 50.0% |
| ! | GGAGGAGATGAGAAGTGTGA+GGG | + | chr7_4:61907104-61907123 | None:intergenic | 50.0% |
| ! | TGAGTGATTTGGGGTGATGG+GGG | + | chr7_4:61907125-61907144 | None:intergenic | 50.0% |
| CATAGAGGGACTGAGCTGTT+TGG | + | chr7_4:61907302-61907321 | None:intergenic | 50.0% | |
| CACAGCCCAAACCCAATACT+TGG | + | chr7_4:61907481-61907500 | None:intergenic | 50.0% | |
| GATCTAGGCGAAGACCTTTC+TGG | + | chr7_4:61907818-61907837 | None:intergenic | 50.0% | |
| ATGCGAGTAAGGGCAAGCTA+CGG | - | chr7_4:61908021-61908040 | Msa1168990:intron | 50.0% | |
| ! | GCCTGTGTAAAGTGCTAGTC+AGG | - | chr7_4:61908120-61908139 | Msa1168990:intron | 50.0% |
| GCCTGACTAGCACTTTACAC+AGG | + | chr7_4:61908124-61908143 | None:intergenic | 50.0% | |
| AGCTTCTCCCCTCTACAACA+AGG | + | chr7_4:61908421-61908440 | None:intergenic | 50.0% | |
| ! | TGCGCGTTTTATCTCAGCAG+CGG | + | chr7_4:61909108-61909127 | None:intergenic | 50.0% |
| ACTTGCCTTACAATGGCACC+CGG | - | chr7_4:61909136-61909155 | Msa1168990:intron | 50.0% | |
| !! | CTTATCCGGGTGCCATTGTA+AGG | + | chr7_4:61909144-61909163 | None:intergenic | 50.0% |
| GAAAATCGCTGCTGCATACG+AGG | - | chr7_4:61909203-61909222 | Msa1168990:intron | 50.0% | |
| ACGCACAAGATACGACCAAG+GGG | - | chr7_4:61909473-61909492 | Msa1168990:intron | 50.0% | |
| ATTCTTCAAGGTCCTCCCCT+TGG | + | chr7_4:61909491-61909510 | None:intergenic | 50.0% | |
| GAAGAATCAGGAATGGGTGG+CGG | - | chr7_4:61909504-61909523 | Msa1168990:intron | 50.0% | |
| GGAGGTTTCAATCCATTCGG+TGG | - | chr7_4:61909534-61909553 | Msa1168990:intron | 50.0% | |
| ! | GGTTTCAATCCATTCGGTGG+TGG | - | chr7_4:61909537-61909556 | Msa1168990:intron | 50.0% |
| ! | TTCAATCCATTCGGTGGTGG+TGG | - | chr7_4:61909540-61909559 | Msa1168990:intron | 50.0% |
| !!! | ACTTTTGATGGTGGCTTCCC+TGG | - | chr7_4:61909579-61909598 | Msa1168990:intron | 50.0% |
| GTGGTCCCTTGAGGAAATCA+AGG | + | chr7_4:61909699-61909718 | None:intergenic | 50.0% | |
| TCTTGCAAGCAACTTGGGGA+TGG | + | chr7_4:61909775-61909794 | None:intergenic | 50.0% | |
| CACGGGGATGGGGTAATACT+TGG | + | chr7_4:61906717-61906736 | None:intergenic | 55.0% | |
| GTTCAAAACCCGGACGAAGG+AGG | + | chr7_4:61906959-61906978 | None:intergenic | 55.0% | |
| TGGGTTCAAAACCCGGACGA+AGG | + | chr7_4:61906962-61906981 | None:intergenic | 55.0% | |
| !!! | TTCGTCCGGGTTTTGAACCC+AGG | - | chr7_4:61906961-61906980 | Msa1168990:CDS | 55.0% |
| GAGGTCCTGGGTTCAAAACC+CGG | + | chr7_4:61906969-61906988 | None:intergenic | 55.0% | |
| GGATAAGGAGTTGGAGGTCC+TGG | + | chr7_4:61906982-61907001 | None:intergenic | 55.0% | |
| ! | AGAAGTGTGAGGGAAGGAGG+GGG | + | chr7_4:61907094-61907113 | None:intergenic | 55.0% |
| ! | GAGAAGTGTGAGGGAAGGAG+GGG | + | chr7_4:61907095-61907114 | None:intergenic | 55.0% |
| ! | GGGAGGAGATGAGAAGTGTG+AGG | + | chr7_4:61907105-61907124 | None:intergenic | 55.0% |
| GGAGCTCTCTCAGCTATTGC+AGG | - | chr7_4:61907263-61907282 | Msa1168990:intron | 55.0% | |
| TGCGAGTAAGGGCAAGCTAC+GGG | - | chr7_4:61908022-61908041 | Msa1168990:intron | 55.0% | |
| GGTGGCAGTGGAGGAATTCA+AGG | - | chr7_4:61908043-61908062 | Msa1168990:intron | 55.0% | |
| ACTCTTGACGGAAGACTGGG+AGG | - | chr7_4:61908443-61908462 | Msa1168990:intron | 55.0% | |
| CTCTTGACGGAAGACTGGGA+GGG | - | chr7_4:61908444-61908463 | Msa1168990:intron | 55.0% | |
| CACAAGATACGACCAAGGGG+AGG | - | chr7_4:61909476-61909495 | Msa1168990:intron | 55.0% | |
| GGGGAGGACCTTGAAGAATC+AGG | - | chr7_4:61909492-61909511 | Msa1168990:intron | 55.0% | |
| !! | TTTGATGGTGGCTTCCCTGG+TGG | - | chr7_4:61909582-61909601 | Msa1168990:intron | 55.0% |
| !! | GTGATTTGGGGTGATGGGGG+AGG | + | chr7_4:61907122-61907141 | None:intergenic | 60.0% |
| !! | GAGGGTGCCATTGCTGAGTC+TGG | - | chr7_4:61907603-61907622 | Msa1168990:CDS | 60.0% |
| GAGTAAGGGCAAGCTACGGG+TGG | - | chr7_4:61908025-61908044 | Msa1168990:intron | 60.0% | |
| GTGCTAGTCAGGCTTGGCAG+AGG | - | chr7_4:61908131-61908150 | Msa1168990:CDS | 60.0% | |
| ! | GAATCAGGAATGGGTGGCGG+CGG | - | chr7_4:61909507-61909526 | Msa1168990:intron | 60.0% |
| TGCTGTCCACCACCACCGAA+TGG | + | chr7_4:61909549-61909568 | None:intergenic | 60.0% | |
| TTCCCTGGTGGAGGCTTTCC+CGG | - | chr7_4:61909594-61909613 | Msa1168990:intron | 60.0% | |
| GTGGTCACGAGTCACGACCC+AGG | + | chr7_4:61905743-61905762 | None:intergenic | 65.0% | |
| GGGGGGTTGGGTAGCTGAAC+TGG | + | chr7_4:61907016-61907035 | None:intergenic | 65.0% | |
| GAGGGGGATGAGTGGCGCAA+TGG | + | chr7_4:61907078-61907097 | None:intergenic | 65.0% | |
| GAGGGAAGGAGGGGGATGAG+TGG | + | chr7_4:61907086-61907105 | None:intergenic | 65.0% | |
| CAAGCTACGGGTGGCAGTGG+AGG | - | chr7_4:61908034-61908053 | Msa1168990:intron | 65.0% | |
| ! | GATGGTGGCTTCCCTGGTGG+AGG | - | chr7_4:61909585-61909604 | Msa1168990:intron | 65.0% |
| CACCGGGAAAGCCTCCACCA+GGG | + | chr7_4:61909599-61909618 | None:intergenic | 65.0% | |
| GGGCAAGCTACGGGTGGCAG+TGG | - | chr7_4:61908031-61908050 | Msa1168990:intron | 70.0% | |
| ! | TCAGGAATGGGTGGCGGCGG+CGG | - | chr7_4:61909510-61909529 | Msa1168990:intron | 70.0% |
| CCACCGGGAAAGCCTCCACC+AGG | + | chr7_4:61909600-61909619 | None:intergenic | 70.0% | |
| CCTGGTGGAGGCTTTCCCGG+TGG | - | chr7_4:61909597-61909616 | Msa1168990:intron | 70.0% | |
| GGTGGAGGCTTTCCCGGTGG+CGG | - | chr7_4:61909600-61909619 | Msa1168990:intron | 70.0% | |
| ! | GGAGGCTTTCCCGGTGGCGG+CGG | - | chr7_4:61909603-61909622 | Msa1168990:intron | 75.0% |
| TAACCACCGCCGCCGCCACC+GGG | + | chr7_4:61909615-61909634 | None:intergenic | 75.0% | |
| GTAACCACCGCCGCCGCCAC+CGG | + | chr7_4:61909616-61909635 | None:intergenic | 75.0% | |
| !! | GGAATGGGTGGCGGCGGCGG+TGG | - | chr7_4:61909513-61909532 | Msa1168990:intron | 80.0% |
| !! | ATGGGTGGCGGCGGCGGTGG+AGG | - | chr7_4:61909516-61909535 | Msa1168990:intron | 80.0% |
| !! | GGCTTTCCCGGTGGCGGCGG+CGG | - | chr7_4:61909606-61909625 | Msa1168990:intron | 80.0% |
| !! | TTTCCCGGTGGCGGCGGCGG+TGG | - | chr7_4:61909609-61909628 | Msa1168990:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 61904819 | 61910007 | 61904819 | ID=Msa1168990;Name=Msa1168990 |
| chr7_4 | mRNA | 61904819 | 61910007 | 61904819 | ID=Msa1168990-mRNA-1;Parent=Msa1168990;Name=Msa1168990-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0.77|0.9|0.9|0.77|0.9|10|357|526 |
| chr7_4 | exon | 61904819 | 61905373 | 61904819 | ID=Msa1168990-mRNA-1:exon:19577;Parent=Msa1168990-mRNA-1 |
| chr7_4 | exon | 61905536 | 61905546 | 61905536 | ID=Msa1168990-mRNA-1:exon:19576;Parent=Msa1168990-mRNA-1 |
| chr7_4 | exon | 61905602 | 61905821 | 61905602 | ID=Msa1168990-mRNA-1:exon:19575;Parent=Msa1168990-mRNA-1 |
| chr7_4 | exon | 61906317 | 61906397 | 61906317 | ID=Msa1168990-mRNA-1:exon:19574;Parent=Msa1168990-mRNA-1 |
| chr7_4 | exon | 61906603 | 61906815 | 61906603 | ID=Msa1168990-mRNA-1:exon:19573;Parent=Msa1168990-mRNA-1 |
| chr7_4 | exon | 61906924 | 61907017 | 61906924 | ID=Msa1168990-mRNA-1:exon:19572;Parent=Msa1168990-mRNA-1 |
| chr7_4 | exon | 61907108 | 61907268 | 61907108 | ID=Msa1168990-mRNA-1:exon:19571;Parent=Msa1168990-mRNA-1 |
| chr7_4 | exon | 61907431 | 61907632 | 61907431 | ID=Msa1168990-mRNA-1:exon:19570;Parent=Msa1168990-mRNA-1 |
| chr7_4 | exon | 61908126 | 61908279 | 61908126 | ID=Msa1168990-mRNA-1:exon:19569;Parent=Msa1168990-mRNA-1 |
| chr7_4 | exon | 61909761 | 61910007 | 61909761 | ID=Msa1168990-mRNA-1:exon:19568;Parent=Msa1168990-mRNA-1 |
| chr7_4 | CDS | 61909761 | 61910007 | 61909761 | ID=Msa1168990-mRNA-1:cds;Parent=Msa1168990-mRNA-1 |
| chr7_4 | CDS | 61908126 | 61908279 | 61908126 | ID=Msa1168990-mRNA-1:cds;Parent=Msa1168990-mRNA-1 |
| chr7_4 | CDS | 61907431 | 61907632 | 61907431 | ID=Msa1168990-mRNA-1:cds;Parent=Msa1168990-mRNA-1 |
| chr7_4 | CDS | 61907108 | 61907268 | 61907108 | ID=Msa1168990-mRNA-1:cds;Parent=Msa1168990-mRNA-1 |
| chr7_4 | CDS | 61906924 | 61907017 | 61906924 | ID=Msa1168990-mRNA-1:cds;Parent=Msa1168990-mRNA-1 |
| chr7_4 | CDS | 61906603 | 61906815 | 61906603 | ID=Msa1168990-mRNA-1:cds;Parent=Msa1168990-mRNA-1 |
| chr7_4 | CDS | 61906317 | 61906397 | 61906317 | ID=Msa1168990-mRNA-1:cds;Parent=Msa1168990-mRNA-1 |
| chr7_4 | CDS | 61905602 | 61905821 | 61905602 | ID=Msa1168990-mRNA-1:cds;Parent=Msa1168990-mRNA-1 |
| chr7_4 | CDS | 61905536 | 61905546 | 61905536 | ID=Msa1168990-mRNA-1:cds;Parent=Msa1168990-mRNA-1 |
| chr7_4 | CDS | 61905176 | 61905373 | 61905176 | ID=Msa1168990-mRNA-1:cds;Parent=Msa1168990-mRNA-1 |
| chr7_4 | three_prime_UTR | 61904819 | 61905175 | 61904819 | ID=Msa1168990-mRNA-1:three_prime_utr;Parent=Msa1168990-mRNA-1 |
| Gene Sequence |
| Protein sequence |
