AlfalfaGEDB | Msa0382400

M. sativa cultivar zhongmu-4 / Msa0382400

KEGG: -
GO: GO:0000030 GO:0002682 GO:0002684 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006464 GO:0006486 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009987 GO:0012505 GO:0016740 GO:0016757 GO:0016758 GO:0019538 GO:0031347 GO:0031349 GO:0034645 GO:0035821 GO:0036211 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043413 GO:0044003 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044403 GO:0044419 GO:0044424 GO:0044444 GO:0044464 GO:0045088 GO:0045089 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050832 GO:0050896 GO:0051701 GO:0051704 GO:0051707 GO:0051817 GO:0052031 GO:0052033 GO:0052166 GO:0052167 GO:0052169 GO:0052173 GO:0052200 GO:0052255 GO:0052257 GO:0052305 GO:0052306 GO:0052308 GO:0052509 GO:0052510 GO:0052552 GO:0052553 GO:0052555 GO:0052556 GO:0052564 GO:0052572 GO:0065007 GO:0070085 GO:0071704 GO:0075136 GO:0080134 GO:0097502 GO:0098542 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576
PFAM: PF02815.22

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0382400	XP_003603304.1	93.722	223	0	1	1	209	1	223	3.63e-149	423

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0382400	sp\|Q93ZE8\|SDF2_ARATH	75.566	221	37	3	1	207	1	218	9.67e-121	344

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0382400	G7J9V5	93.722	223	0	1	1	209	1	223	1.74e-149	423

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0003930	Msa0382400	0.823441	1.383228e-53	-8.615850e-47
Msa0017320	Msa0382400	0.805845	1.096570e-49	-8.615850e-47
Msa0033880	Msa0382400	0.857579	1.482317e-62	-8.615850e-47
Msa0041690	Msa0382400	0.802571	5.266124e-49	-8.615850e-47
Msa0047250	Msa0382400	0.809969	1.454580e-50	-8.615850e-47
Msa0057590	Msa0382400	0.800336	1.512125e-48	-8.615850e-47
Msa0076780	Msa0382400	0.806686	7.293467e-50	-8.615850e-47
Msa0077540	Msa0382400	0.833842	4.226476e-56	-8.615850e-47
Msa0081650	Msa0382400	0.815083	1.108759e-51	-8.615850e-47
Msa0100800	Msa0382400	0.843344	1.484552e-58	-8.615850e-47
Msa0102600	Msa0382400	0.834431	3.010194e-56	-8.615850e-47
Msa0106050	Msa0382400	0.800627	1.318574e-48	-8.615850e-47
Msa0118710	Msa0382400	0.804565	2.032353e-49	-8.615850e-47
Msa0126840	Msa0382400	0.824972	6.040991e-54	-8.615850e-47
Msa0126880	Msa0382400	0.833553	4.992911e-56	-8.615850e-47
Msa0127040	Msa0382400	0.821633	3.639383e-53	-8.615850e-47
Msa0127850	Msa0382400	0.842873	1.982265e-58	-8.615850e-47
Msa0147380	Msa0382400	0.837029	6.614873e-57	-8.615850e-47
Msa0166750	Msa0382400	0.822958	1.792647e-53	-8.615850e-47
Msa0167480	Msa0382400	0.809054	2.287382e-50	-8.615850e-47
Msa0171980	Msa0382400	0.823049	1.707470e-53	-8.615850e-47
Msa0174000	Msa0382400	0.866850	2.108334e-65	-8.615850e-47
Msa0193600	Msa0382400	0.801768	7.705602e-49	-8.615850e-47
Msa0208300	Msa0382400	0.816620	5.035376e-52	-8.615850e-47
Msa0208310	Msa0382400	0.862459	4.992039e-64	-8.615850e-47
Msa0225670	Msa0382400	0.836249	1.045165e-56	-8.615850e-47
Msa0229360	Msa0382400	0.823015	1.738932e-53	-8.615850e-47
Msa0372420	Msa0382400	0.840227	9.875014e-58	-8.615850e-47
Msa0382400	Msa0384670	0.800546	1.369929e-48	-8.615850e-47
Msa0382400	Msa0384880	0.834111	3.620994e-56	-8.615850e-47
Msa0382400	Msa0408300	0.804017	2.642600e-49	-8.615850e-47
Msa0382400	Msa0432130	0.893231	7.621427e-75	-8.615850e-47
Msa0382400	Msa0436200	0.800649	1.305090e-48	-8.615850e-47
Msa0382400	Msa0438000	0.860576	1.876514e-63	-8.615850e-47
Msa0382400	Msa0452980	0.830087	3.577220e-55	-8.615850e-47
Msa0382400	Msa0476640	0.898196	6.725924e-77	-8.615850e-47
Msa0382400	Msa0478580	0.802253	6.124721e-49	-8.615850e-47
Msa0382400	Msa0485240	0.807267	5.495822e-50	-8.615850e-47
Msa0382400	Msa0495360	0.816944	4.257836e-52	-8.615850e-47
Msa0382400	Msa0530100	0.803643	3.160777e-49	-8.615850e-47
Msa0382400	Msa0547080	0.825159	5.457780e-54	-8.615850e-47
Msa0382400	Msa0550570	0.800648	1.305708e-48	-8.615850e-47
Msa0382400	Msa0561430	0.814618	1.405516e-51	-8.615850e-47
Msa0382400	Msa0573010	0.855350	6.691744e-62	-8.615850e-47
Msa0382400	Msa0573090	0.882780	7.817774e-71	-8.615850e-47
Msa0382400	Msa0583500	0.800078	1.706367e-48	-8.615850e-47
Msa0382400	Msa0593700	0.815042	1.131835e-51	-8.615850e-47
Msa0382400	Msa0597000	0.837208	5.952951e-57	-8.615850e-47
Msa0382400	Msa0603670	0.803912	2.779021e-49	-8.615850e-47
Msa0382400	Msa0619420	0.810866	9.315526e-51	-8.615850e-47
Msa0382400	Msa0620620	0.823875	1.094387e-53	-8.615850e-47
Msa0382400	Msa0626940	0.804559	2.038509e-49	-8.615850e-47
Msa0382400	Msa0633570	0.804176	2.449550e-49	-8.615850e-47
Msa0382400	Msa0654870	0.805380	1.372823e-49	-8.615850e-47
Msa0382400	Msa0659550	0.805805	1.117821e-49	-8.615850e-47
Msa0382400	Msa0659790	0.808872	2.501114e-50	-8.615850e-47
Msa0382400	Msa0689630	-0.814187	1.750239e-51	-8.615850e-47
Msa0382400	Msa0707100	0.851074	1.124347e-60	-8.615850e-47
Msa0382400	Msa0719420	0.810174	1.314083e-50	-8.615850e-47
Msa0382400	Msa0739080	0.843989	9.981514e-59	-8.615850e-47
Msa0382400	Msa0745200	0.818233	2.181672e-52	-8.615850e-47
Msa0382400	Msa0750920	0.805692	1.180594e-49	-8.615850e-47
Msa0382400	Msa0779260	0.811816	5.794729e-51	-8.615850e-47
Msa0382400	Msa0789680	0.806656	7.397569e-50	-8.615850e-47
Msa0382400	Msa0802410	0.806290	8.837417e-50	-8.615850e-47
Msa0382400	Msa0804250	0.800806	1.212757e-48	-8.615850e-47
Msa0382400	Msa0819540	0.865426	5.957827e-65	-8.615850e-47
Msa0382400	Msa0825270	0.800964	1.125548e-48	-8.615850e-47
Msa0382400	Msa0826760	0.820905	5.356885e-53	-8.615850e-47
Msa0382400	Msa0865570	0.805172	1.517568e-49	-8.615850e-47
Msa0382400	Msa0880810	0.808314	3.291227e-50	-8.615850e-47
Msa0382400	Msa0925770	0.806235	9.075999e-50	-8.615850e-47
Msa0382400	Msa0928120	0.817175	3.779595e-52	-8.615850e-47
Msa0382400	Msa0943270	0.806553	7.780211e-50	-8.615850e-47
Msa0382400	Msa0968440	0.807070	6.048416e-50	-8.615850e-47
Msa0382400	Msa1041140	0.866252	3.266226e-65	-8.615850e-47
Msa0382400	Msa1070390	0.856411	3.277344e-62	-8.615850e-47
Msa0382400	Msa1072710	0.803806	2.924610e-49	-8.615850e-47
Msa0382400	Msa1079190	0.901902	1.673732e-78	-8.615850e-47
Msa0382400	Msa1082290	0.865877	4.293828e-65	-8.615850e-47
Msa0382400	Msa1083880	0.821188	4.611909e-53	-8.615850e-47
Msa0382400	Msa1089270	0.811646	6.309835e-51	-8.615850e-47
Msa0382400	Msa1124060	0.855534	5.915808e-62	-8.615850e-47
Msa0382400	Msa1124070	0.852028	6.039173e-61	-8.615850e-47
Msa0382400	Msa1127190	0.857965	1.139315e-62	-8.615850e-47
Msa0382400	Msa1127540	0.817896	2.599083e-52	-8.615850e-47
Msa0382400	Msa1131170	0.837854	4.065921e-57	-8.615850e-47
Msa0382400	Msa1133540	0.900191	9.380457e-78	-8.615850e-47
Msa0382400	Msa1138870	0.800013	1.758442e-48	-8.615850e-47
Msa0382400	Msa1158230	0.823288	1.501428e-53	-8.615850e-47
Msa0382400	Msa1165780	0.809438	1.892291e-50	-8.615850e-47
Msa0382400	Msa1166870	0.818923	1.521624e-52	-8.615850e-47
Msa0382400	Msa1168990	0.881567	2.156199e-70	-8.615850e-47
Msa0382400	Msa1169080	0.913046	9.684324e-84	-8.615850e-47
Msa0382400	Msa1206650	0.812793	3.545322e-51	-8.615850e-47
Msa0382400	Msa1207730	0.804281	2.328840e-49	-8.615850e-47
Msa0382400	Msa1218580	0.810834	9.462850e-51	-8.615850e-47
Msa0382400	Msa1235380	0.816402	5.634527e-52	-8.615850e-47
Msa0382400	Msa1315440	0.803860	2.849831e-49	-8.615850e-47
Msa0382400	Msa1331710	0.811264	7.636476e-51	-8.615850e-47
Msa0382400	Msa1344310	0.807819	4.194529e-50	-8.615850e-47
Msa0382400	Msa1349570	0.804171	2.455470e-49	-8.615850e-47
Msa0382400	Msa1349860	0.824122	9.577579e-54	-8.615850e-47
Msa0382400	Msa1362020	0.899369	2.121018e-77	-8.615850e-47
Msa0382400	Msa1364160	0.810039	1.405467e-50	-8.615850e-47
Msa0382400	Msa1373820	0.802392	5.732596e-49	-8.615850e-47
Msa0382400	Msa1391550	0.818078	2.364628e-52	-8.615850e-47
Msa0382400	Msa1411950	0.802885	4.536955e-49	-8.615850e-47
Msa0382400	Msa1418240	0.802947	4.405685e-49	-8.615850e-47
Msa0382400	Msa1421460	0.831330	1.774839e-55	-8.615850e-47
Msa0382400	Msa1422430	0.825143	5.503654e-54	-8.615850e-47
Msa0382400	Msa1436600	0.815563	8.671522e-52	-8.615850e-47
Msa0382400	Msa1462470	0.803516	3.359002e-49	-8.615850e-47
Msa0382400	Msa1463600	0.813771	2.162326e-51	-8.615850e-47
Msa0262480	Msa0382400	0.845159	4.833334e-59	-8.615850e-47
Msa0273650	Msa0382400	0.807097	5.970948e-50	-8.615850e-47
Msa0274100	Msa0382400	0.820155	7.965790e-53	-8.615850e-47
Msa0291520	Msa0382400	0.800007	1.763632e-48	-8.615850e-47
Msa0300350	Msa0382400	0.838127	3.458385e-57	-8.615850e-47
Msa0304100	Msa0382400	0.821851	3.240633e-53	-8.615850e-47
Msa0320430	Msa0382400	0.805079	1.587275e-49	-8.615850e-47
Msa0322900	Msa0382400	0.808722	2.692774e-50	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0382400	MtrunA17_Chr3g0137031	93.722	223	0	1	1	209	1	223	3.34e-153	423

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0382400	AT2G25110.1	75.566	221	37	3	1	207	1	218	9.83e-122	344

Find 94 sgRNAs with CRISPR-Local

Find 282 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATTACATAATCAATGTTAAT+TGG	0.209659	3_1:+84929260	None:intergenic
CCGAATCGGACCTTCCGATT+TGG	0.265896	3_1:-84932649	Msa0382400:five_prime_UTR
TCGTAGGTTCAGATTACTTA+TGG	0.286075	3_1:-84932374	Msa0382400:intron
GCTTGTTTGCTTTCAGTAAC+AGG	0.291634	3_1:+84929304	None:intergenic
TGGATTCTCTGTATATAATT+CGG	0.295440	3_1:+84932681	None:intergenic
TTGAATACGTGCGCACTCTT+AGG	0.313367	3_1:-84929181	Msa0382400:three_prime_UTR
TTCCGATTTGGCAACGTAAC+TGG	0.320186	3_1:-84932637	Msa0382400:five_prime_UTR
TGAGAAATGAGAACTTCTTA+TGG	0.337385	3_1:+84932828	None:intergenic
CATGATGTGCCGTATGGTTC+TGG	0.341908	3_1:-84932302	Msa0382400:CDS
TGACATTAGGTCAGTTGCTT+TGG	0.344891	3_1:-84929950	Msa0382400:intron
AAGAAATACAGTCGGATTGC+TGG	0.351480	3_1:-84929718	Msa0382400:CDS
ACCTCGAGGTTGCCTGATAT+TGG	0.351770	3_1:+84931615	None:intergenic
GCCTGCCTGCATCTATTATC+AGG	0.359479	3_1:+84929219	None:intergenic
TGCATGAGAAGACGAAATTT+AGG	0.360472	3_1:-84932334	Msa0382400:CDS
CATCGCATTTCTCTTCATAA+TGG	0.382553	3_1:-84932612	Msa0382400:exon
TTGCATGCATCTCCAATATC+AGG	0.387842	3_1:-84931627	Msa0382400:CDS
GGAAGCAGGATCAGAGGTTT+CGG	0.389388	3_1:-84929783	Msa0382400:CDS
GGATTCTCTGTATATAATTC+GGG	0.392659	3_1:+84932682	None:intergenic
CATTAGGTCAGTTGCTTTGG+TGG	0.395744	3_1:-84929947	Msa0382400:intron
ACTTTGTTATGAAGTATTGC+AGG	0.407176	3_1:-84929123	Msa0382400:three_prime_UTR
CCTTGTTTAGCAGAAGTTCC+CGG	0.418813	3_1:+84931720	None:intergenic
CATGTGCTGTAATCTAATTA+TGG	0.420817	3_1:+84931677	None:intergenic
CTTCAGCATATTGACACTTC+AGG	0.431415	3_1:-84929760	Msa0382400:CDS
TTTGTTGTGCAACGTGGTAA+TGG	0.432132	3_1:-84929064	Msa0382400:three_prime_UTR
GCTTCCGCTGCTTCCTCCGA+AGG	0.436268	3_1:-84932512	Msa0382400:CDS
CAAGTATTTGTGAGAGATGA+AGG	0.436949	3_1:+84929099	None:intergenic
CCAAATCGGAAGGTCCGATT+CGG	0.442048	3_1:+84932649	None:intergenic
TTCTGGAAGCGGACAACAAT+CGG	0.446940	3_1:-84932285	Msa0382400:intron
TTGTTGTGCAACGTGGTAAT+GGG	0.450269	3_1:-84929063	Msa0382400:three_prime_UTR
AACCAGTTACGTTGCCAAAT+CGG	0.450417	3_1:+84932635	None:intergenic
TCAATTATGACTAAATATGA+TGG	0.452508	3_1:-84929033	Msa0382400:three_prime_UTR
GAAGCAGAAGCGGTGGAAGA+AGG	0.455500	3_1:+84932530	None:intergenic
TCTGTTACCGTGGCTTCCTC+AGG	0.458090	3_1:-84932776	Msa0382400:five_prime_UTR
GTATTCAACAGACTAATAGA+AGG	0.463467	3_1:+84929196	None:intergenic
GGTTCAGATTACTTATGGTT+CGG	0.465352	3_1:-84932369	Msa0382400:CDS
AGAAATACAGTCGGATTGCT+GGG	0.474779	3_1:-84929717	Msa0382400:CDS
TTAGCAGAAGTTCCCGGCTC+AGG	0.477115	3_1:+84931726	None:intergenic
TCTTCGCAACAATCACAAAC+CGG	0.479843	3_1:-84932710	Msa0382400:five_prime_UTR
GGCTTCCTCAGGTTCACACC+AGG	0.480468	3_1:-84932765	Msa0382400:five_prime_UTR
CAGGATCGAGAGTGAGGAAG+AGG	0.481723	3_1:+84932561	None:intergenic
AGCAGCGGAAGCAGAAGCGG+TGG	0.482931	3_1:+84932523	None:intergenic
AATCTGACACCGGAGACTAT+TGG	0.492423	3_1:-84929916	Msa0382400:CDS
TTCTTCGTGATAATCCTCCC+TGG	0.499855	3_1:+84932747	None:intergenic
GCAGATTGTTAGGCCTGAGC+CGG	0.500530	3_1:-84931739	Msa0382400:intron
AAAAGCGTGCTGACAATGTC+TGG	0.500771	3_1:-84929351	Msa0382400:CDS
TTTCTCTTCATAATGGCTCT+CGG	0.501984	3_1:-84932605	Msa0382400:exon
CAGATTGTTAGGCCTGAGCC+GGG	0.502326	3_1:-84931738	Msa0382400:CDS
GGAAGCAGCGGAAGCAGAAG+CGG	0.512121	3_1:+84932520	None:intergenic
TAGAAGGAAGTGGAAAGACT+TGG	0.513988	3_1:-84929804	Msa0382400:CDS
GTATATAATTCGGGTCGACC+CGG	0.527964	3_1:+84932691	None:intergenic
GTGGAAGAAGGAGAAACATC+AGG	0.532442	3_1:+84932542	None:intergenic
TGTTGCGAAGATGAAGAAGA+GGG	0.540918	3_1:+84932722	None:intergenic
GTGCCGTATGGTTCTGGAAG+CGG	0.541874	3_1:-84932296	Msa0382400:CDS
AAGTGGAAAGACTTGGAAGC+AGG	0.549058	3_1:-84929797	Msa0382400:CDS
TGTAATTGAGAGGCTAGCAT+TGG	0.550640	3_1:-84929243	Msa0382400:three_prime_UTR
TCCTCCCTGGTGTGAACCTG+AGG	0.562553	3_1:+84932760	None:intergenic
CATTCTCATGATGTGCCGTA+TGG	0.565118	3_1:-84932308	Msa0382400:CDS
ATCCACGATCCATTCCGAAT+CGG	0.565737	3_1:-84932663	Msa0382400:five_prime_UTR
GTCCGATTCGGAATGGATCG+TGG	0.566914	3_1:+84932661	None:intergenic
TCGGAAGGTCCGATTCGGAA+TGG	0.568515	3_1:+84932654	None:intergenic
TCCTGATAATAGATGCAGGC+AGG	0.568570	3_1:-84929220	Msa0382400:three_prime_UTR
AGCACATGAGGACAAGGAAG+TGG	0.569620	3_1:-84931662	Msa0382400:CDS
AAACATCAGGATCGAGAGTG+AGG	0.571407	3_1:+84932555	None:intergenic
ATATTGGAGATGCATGCAAA+TGG	0.578968	3_1:+84931631	None:intergenic
ATGTTACCTCCAATAGTCTC+CGG	0.582960	3_1:+84929907	None:intergenic
TTGGTCCTGATAATAGATGC+AGG	0.583586	3_1:-84929224	Msa0382400:three_prime_UTR
GACGCCTTCGGAGGAAGCAG+CGG	0.588960	3_1:+84932508	None:intergenic
TGCTTCCTCCGAAGGCGTCG+AGG	0.590089	3_1:-84932504	Msa0382400:intron
ACATTGATTATGTAATTGAG+AGG	0.593357	3_1:-84929253	Msa0382400:three_prime_UTR
TTGTTGCGAAGATGAAGAAG+AGG	0.594806	3_1:+84932721	None:intergenic
AGACTTGGAAGCAGGATCAG+AGG	0.598848	3_1:-84929789	Msa0382400:CDS
AATGTCTGGTTGGCAGCTGA+AGG	0.604877	3_1:-84929337	Msa0382400:CDS
CCGGGAACTTCTGCTAAACA+AGG	0.606092	3_1:-84931720	Msa0382400:CDS
CTTCGCAACAATCACAAACC+GGG	0.613362	3_1:-84932709	Msa0382400:five_prime_UTR
GTTTGCTTTCAGTAACAGGA+AGG	0.620407	3_1:+84929308	None:intergenic
CTGACACCGGAGACTATTGG+AGG	0.623433	3_1:-84929913	Msa0382400:intron
GAAATACAGTCGGATTGCTG+GGG	0.626610	3_1:-84929716	Msa0382400:CDS
TATTCAACAGACTAATAGAA+GGG	0.628847	3_1:+84929197	None:intergenic
TGTCCGCTTCCAGAACCATA+CGG	0.629181	3_1:+84932293	None:intergenic
GATTACAGCACATGAGGACA+AGG	0.630108	3_1:-84931668	Msa0382400:CDS
TAATTAGATTACAGCACATG+AGG	0.633783	3_1:-84931674	Msa0382400:CDS
GCTTCCTCAGGTTCACACCA+GGG	0.635858	3_1:-84932764	Msa0382400:five_prime_UTR
CAAGGTGACACCATTAAAAG+CGG	0.636945	3_1:-84931702	Msa0382400:CDS
GTGTGAACCTGAGGAAGCCA+CGG	0.640860	3_1:+84932769	None:intergenic
AAGTATTTGTGAGAGATGAA+GGG	0.643926	3_1:+84929100	None:intergenic
GTCATGATAAGAAATACAGT+CGG	0.652607	3_1:-84929726	Msa0382400:CDS
AGTTACGTTGCCAAATCGGA+AGG	0.655945	3_1:+84932639	None:intergenic
GCTGCACTAATCTGTTACCG+TGG	0.660208	3_1:-84932786	Msa0382400:five_prime_UTR
TCCAATATCAGGCAACCTCG+AGG	0.661922	3_1:-84931616	Msa0382400:intron
GCGTGCTGACAATGTCTGGT+TGG	0.666660	3_1:-84929347	Msa0382400:CDS
AGATTAGTGCAGCATCAATG+TGG	0.672263	3_1:+84932796	None:intergenic
GGAGAAAATGAATCTGACAC+CGG	0.681547	3_1:-84929926	Msa0382400:CDS
AAATACAGTCGGATTGCTGG+GGG	0.696198	3_1:-84929715	Msa0382400:CDS
TCCTCAGGTTCACACCAGGG+AGG	0.713409	3_1:-84932761	Msa0382400:five_prime_UTR

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAACAAAACTTAAAATAAAT+AGG	+	chr3_1:84929691-84929710	None:intergenic	10.0%
!!!	TATTTATTTTAAGTTTTGTT+TGG	-	chr3_1:84929690-84929709	Msa0382400:intron	10.0%
!!!	GATTTTTAATTTTAATATTG+CGG	+	chr3_1:84930425-84930444	None:intergenic	10.0%
!!	GCATAAAAAATAAAAATATT+GGG	+	chr3_1:84932448-84932467	None:intergenic	10.0%
!!	TGCATAAAAAATAAAAATAT+TGG	+	chr3_1:84932449-84932468	None:intergenic	10.0%
!!	AAAAAAATAGTAAGAGATTA+TGG	+	chr3_1:84930057-84930076	None:intergenic	15.0%
!!	TTTATTACTATATATGCTTT+AGG	-	chr3_1:84930326-84930345	Msa0382400:intron	15.0%
!!	CTTAAAAAATTAAATAATCC+TGG	+	chr3_1:84930619-84930638	None:intergenic	15.0%
!!	ATTACATAATCAATGTTAAT+TGG	+	chr3_1:84932633-84932652	None:intergenic	15.0%
!!!	TCTTTCCAATTTTATTGTTT+AGG	-	chr3_1:84929432-84929451	Msa0382400:intron	20.0%
!!!	CTTTCCAATTTTATTGTTTA+GGG	-	chr3_1:84929433-84929452	Msa0382400:intron	20.0%
!!!	TTTTGATTTTGAAATTTCGT+AGG	-	chr3_1:84929500-84929519	Msa0382400:intron	20.0%
!!	TAGCTTAATTAAGTGTTTAT+AGG	-	chr3_1:84929718-84929737	Msa0382400:CDS	20.0%
!!!	CATTTTTTTTACTCAGTATT+CGG	+	chr3_1:84929941-84929960	None:intergenic	20.0%
!!!	TTATTATTTTGCAGATTGTT+AGG	-	chr3_1:84930141-84930160	Msa0382400:intron	20.0%
!!	GCATTATATTAAGATGAAAA+AGG	+	chr3_1:84930696-84930715	None:intergenic	20.0%
!!!	AATTTTGACTTTTGAATGTA+TGG	-	chr3_1:84930973-84930992	Msa0382400:intron	20.0%
!!	AACATTTCCATTATTGTTTA+GGG	+	chr3_1:84931086-84931105	None:intergenic	20.0%
!!	AAACATTTCCATTATTGTTT+AGG	+	chr3_1:84931087-84931106	None:intergenic	20.0%
!!	AAAGAAAACAGAAATCAAAA+TGG	+	chr3_1:84931243-84931262	None:intergenic	20.0%
!!!	TATATTTTTGAACATGTCTT+AGG	-	chr3_1:84931283-84931302	Msa0382400:intron	20.0%
!!	AACTTGTAATTACTTATAAG+TGG	+	chr3_1:84931659-84931678	None:intergenic	20.0%
!!	AAAAATAATGTGTAGGTTAA+GGG	+	chr3_1:84931793-84931812	None:intergenic	20.0%
!!	AAAAAATAATGTGTAGGTTA+AGG	+	chr3_1:84931794-84931813	None:intergenic	20.0%
!!!	TTAACCTACACATTATTTTT+TGG	-	chr3_1:84931793-84931812	Msa0382400:intron	20.0%
!!!	ATAATTTTTGAGTTGACATT+AGG	-	chr3_1:84931927-84931946	Msa0382400:intron	20.0%
!!!	AAATTGGTTTTATTTTCGTT+AGG	-	chr3_1:84932056-84932075	Msa0382400:intron	20.0%
!!	CAGTGCATATATAATTTAAA+TGG	+	chr3_1:84932295-84932314	None:intergenic	20.0%
!!!	ATATATGCACTGAAATTTTT+TGG	-	chr3_1:84932303-84932322	Msa0382400:CDS	20.0%
!!!	GTCATTTATTTTATTTGACT+AGG	-	chr3_1:84932501-84932520	Msa0382400:intron	20.0%
!!!	TGATAGATATATTTTGTCAT+AGG	-	chr3_1:84932741-84932760	Msa0382400:five_prime_UTR	20.0%
!!	TCAATTATGACTAAATATGA+TGG	-	chr3_1:84932857-84932876	Msa0382400:five_prime_UTR	20.0%
!!!	TTCTTATGGTTTTTGGATTA+TGG	+	chr3_1:84929051-84929070	None:intergenic	25.0%
!	TGGATTCTCTGTATATAATT+CGG	+	chr3_1:84929212-84929231	None:intergenic	25.0%
!	CTAACCCTAAACAATAAAAT+TGG	+	chr3_1:84929440-84929459	None:intergenic	25.0%
!	TTAAAATACCCAATAACTGT+TGG	+	chr3_1:84929658-84929677	None:intergenic	25.0%
!	AAAAGATAAAATAAAGCCCA+AGG	-	chr3_1:84929788-84929807	Msa0382400:CDS	25.0%
!!	GCTGTTTAAATGAACTATTT+TGG	-	chr3_1:84929969-84929988	Msa0382400:intron	25.0%
!	TAGTAATAAACACTTGCAAA+AGG	+	chr3_1:84930316-84930335	None:intergenic	25.0%
!!!	ATATATGCTTTAGGATTTGT+TGG	-	chr3_1:84930335-84930354	Msa0382400:intron	25.0%
!	AATATTGCGGTTATATGTAA+GGG	+	chr3_1:84930412-84930431	None:intergenic	25.0%
!	TAATATTGCGGTTATATGTA+AGG	+	chr3_1:84930413-84930432	None:intergenic	25.0%
!!!	ACAGTTGATTCCTTTTTAAT+GGG	-	chr3_1:84930445-84930464	Msa0382400:intron	25.0%
!	AATTTGCAACATCAATAAGT+GGG	+	chr3_1:84930485-84930504	None:intergenic	25.0%
!!!	TTTTTTAAGTGCTCAAACTA+AGG	-	chr3_1:84930630-84930649	Msa0382400:intron	25.0%
!	GATTGGTGAATGATAAAATA+TGG	+	chr3_1:84930747-84930766	None:intergenic	25.0%
!	TTGAACCAATGTTTATAAAC+CGG	-	chr3_1:84930778-84930797	Msa0382400:intron	25.0%
!	CATTCAAAACTCAAAATTCT+AGG	+	chr3_1:84930910-84930929	None:intergenic	25.0%
!	AAGGTCTATCACAAAATAAT+AGG	+	chr3_1:84931125-84931144	None:intergenic	25.0%
!!	TCAATGACATCAATTGATTT+AGG	-	chr3_1:84931417-84931436	Msa0382400:intron	25.0%
!!	CAATGACATCAATTGATTTA+GGG	-	chr3_1:84931418-84931437	Msa0382400:intron	25.0%
!	TTGTTAAAGTCATAACGTTA+GGG	-	chr3_1:84931521-84931540	Msa0382400:intron	25.0%
!	CAAGATAAGTGATAAATCAA+TGG	+	chr3_1:84931563-84931582	None:intergenic	25.0%
!	TTGTAATTACTTATAAGTGG+TGG	+	chr3_1:84931656-84931675	None:intergenic	25.0%
!	TACTTATATAGAATGAGCTA+AGG	-	chr3_1:84931756-84931775	Msa0382400:intron	25.0%
!	ACTTATATAGAATGAGCTAA+GGG	-	chr3_1:84931757-84931776	Msa0382400:intron	25.0%
!	AAGACCAAAAAATAATGTGT+AGG	+	chr3_1:84931800-84931819	None:intergenic	25.0%
!	TTAGATCTCTATATTCTCAA+AGG	-	chr3_1:84932028-84932047	Msa0382400:intron	25.0%
!	TTATGCATAATTGTTAGCAT+TGG	-	chr3_1:84932462-84932481	Msa0382400:intron	25.0%
!	TATGCATAATTGTTAGCATT+GGG	-	chr3_1:84932463-84932482	Msa0382400:intron	25.0%
!!!	ATTTTATTTGACTAGGTTTG+TGG	-	chr3_1:84932508-84932527	Msa0382400:CDS	25.0%
!!	ACATTGATTATGTAATTGAG+AGG	-	chr3_1:84932637-84932656	Msa0382400:five_prime_UTR	25.0%
!	TATTCAACAGACTAATAGAA+GGG	+	chr3_1:84932696-84932715	None:intergenic	25.0%
!	TGAGAACTTCTTATGGTTTT+TGG	+	chr3_1:84929058-84929077	None:intergenic	30.0%
	TGAGAAATGAGAACTTCTTA+TGG	+	chr3_1:84929065-84929084	None:intergenic	30.0%
	GGATTCTCTGTATATAATTC+GGG	+	chr3_1:84929211-84929230	None:intergenic	30.0%
!	TTGATGATTCCAACAGTTAT+TGG	-	chr3_1:84929646-84929665	Msa0382400:intron	30.0%
	TGATGATTCCAACAGTTATT+GGG	-	chr3_1:84929647-84929666	Msa0382400:intron	30.0%
!!	GAACTATTTTGGAAAGATCA+CGG	-	chr3_1:84929980-84929999	Msa0382400:intron	30.0%
!	GTAAGAGATTATGGTCTTTT+TGG	+	chr3_1:84930048-84930067	None:intergenic	30.0%
!!!	CTCTTACTATTTTTTTTGCG+TGG	-	chr3_1:84930061-84930080	Msa0382400:intron	30.0%
!!	AATTATGGTTCCGCTTTTAA+TGG	+	chr3_1:84930201-84930220	None:intergenic	30.0%
	CATGTGCTGTAATCTAATTA+TGG	+	chr3_1:84930216-84930235	None:intergenic	30.0%
	TAATTAGATTACAGCACATG+AGG	-	chr3_1:84930216-84930235	Msa0382400:intron	30.0%
!	ACTTCAATAAGCTGATTCTA+AGG	-	chr3_1:84930381-84930400	Msa0382400:intron	30.0%
	ATATTGCGGTTATATGTAAG+GGG	+	chr3_1:84930411-84930430	None:intergenic	30.0%
!!	CACAGTTGATTCCTTTTTAA+TGG	-	chr3_1:84930444-84930463	Msa0382400:intron	30.0%
!!	CAGTTGATTCCTTTTTAATG+GGG	-	chr3_1:84930446-84930465	Msa0382400:intron	30.0%
!!	AGTTGATTCCTTTTTAATGG+GGG	-	chr3_1:84930447-84930466	Msa0382400:intron	30.0%
	ATTTGCAACATCAATAAGTG+GGG	+	chr3_1:84930484-84930503	None:intergenic	30.0%
	CAATTTGCAACATCAATAAG+TGG	+	chr3_1:84930486-84930505	None:intergenic	30.0%
	CACAAGAGAAATTGCATTAA+TGG	+	chr3_1:84930575-84930594	None:intergenic	30.0%
!!	TAAACATTGGTTCAAATAGC+AGG	+	chr3_1:84930773-84930792	None:intergenic	30.0%
	AAAGTCTGTGACAAAGTAAT+AGG	+	chr3_1:84931023-84931042	None:intergenic	30.0%
	CTTGTTACCCTAAACAATAA+TGG	-	chr3_1:84931076-84931095	Msa0382400:intron	30.0%
	AAGACATAATTTCCTCTTGT+GGG	+	chr3_1:84931482-84931501	None:intergenic	30.0%
	CTTGTTAAAGTCATAACGTT+AGG	-	chr3_1:84931520-84931539	Msa0382400:intron	30.0%
	TAAAACAACTAAACCTTGTC+TGG	+	chr3_1:84931603-84931622	None:intergenic	30.0%
	TTATAAACCCAGTTATCCAA+TGG	+	chr3_1:84931911-84931930	None:intergenic	30.0%
!!	ATTCTCAAAGGTGCTTAAAT+TGG	-	chr3_1:84932040-84932059	Msa0382400:intron	30.0%
!	TTCGTTAGGCTTTTAATAGA+AGG	-	chr3_1:84932070-84932089	Msa0382400:intron	30.0%
	GTCATGATAAGAAATACAGT+CGG	-	chr3_1:84932164-84932183	Msa0382400:intron	30.0%
!	AAAGACGACAGAAATTTTCA+AGG	+	chr3_1:84932229-84932248	None:intergenic	30.0%
	AAAAATGACGCATAGGTTAA+GGG	+	chr3_1:84932264-84932283	None:intergenic	30.0%
	AAAAAATGACGCATAGGTTA+AGG	+	chr3_1:84932265-84932284	None:intergenic	30.0%
	GTATTCAACAGACTAATAGA+AGG	+	chr3_1:84932697-84932716	None:intergenic	30.0%
!!	ACTTTGTTATGAAGTATTGC+AGG	-	chr3_1:84932767-84932786	Msa0382400:five_prime_UTR	30.0%
	AAGTATTTGTGAGAGATGAA+GGG	+	chr3_1:84932793-84932812	None:intergenic	30.0%
	CATCGCATTTCTCTTCATAA+TGG	-	chr3_1:84929278-84929297	Msa0382400:exon	35.0%
	TTTCTCTTCATAATGGCTCT+CGG	-	chr3_1:84929285-84929304	Msa0382400:exon	35.0%
	TCGTAGGTTCAGATTACTTA+TGG	-	chr3_1:84929516-84929535	Msa0382400:intron	35.0%
	GGTTCAGATTACTTATGGTT+CGG	-	chr3_1:84929521-84929540	Msa0382400:intron	35.0%
	TGCATGAGAAGACGAAATTT+AGG	-	chr3_1:84929556-84929575	Msa0382400:intron	35.0%
	ATAAAATAAAGCCCAAGGCT+TGG	-	chr3_1:84929793-84929812	Msa0382400:CDS	35.0%
	TAAAATAAAGCCCAAGGCTT+GGG	-	chr3_1:84929794-84929813	Msa0382400:CDS	35.0%
!!	AGTAAGCCTTGGCTTTAAAT+GGG	-	chr3_1:84929866-84929885	Msa0382400:intron	35.0%
!	TTTTACTCAGTATTCGGCTT+AGG	+	chr3_1:84929935-84929954	None:intergenic	35.0%
	AACAAGCTGAAAACAACCTA+TGG	-	chr3_1:84930004-84930023	Msa0382400:intron	35.0%
!	TGGATGATCTGTGTTGATAT+TGG	-	chr3_1:84930081-84930100	Msa0382400:intron	35.0%
!!	GATATTGGCACTTTGGAATT+TGG	-	chr3_1:84930096-84930115	Msa0382400:intron	35.0%
!!	TGGAATTTGGTTCTTGACTT+TGG	-	chr3_1:84930109-84930128	Msa0382400:intron	35.0%
	ATATTGGAGATGCATGCAAA+TGG	+	chr3_1:84930262-84930281	None:intergenic	35.0%
	GAGATATACCCCCATTAAAA+AGG	+	chr3_1:84930458-84930477	None:intergenic	35.0%
!	TAAAGACAAGACTCTGCTTT+TGG	-	chr3_1:84930542-84930561	Msa0382400:intron	35.0%
	CCTGGTAAAAGCTAATCAAA+AGG	+	chr3_1:84930601-84930620	None:intergenic	35.0%
!!!	CCTTTTGATTAGCTTTTACC+AGG	-	chr3_1:84930598-84930617	Msa0382400:intron	35.0%
	CATTACATATCATCCACACA+GGG	-	chr3_1:84930669-84930688	Msa0382400:intron	35.0%
	ATCATGACACAAAGGTTTGT+CGG	+	chr3_1:84930815-84930834	None:intergenic	35.0%
	CCAACTAAATCATGACACAA+AGG	+	chr3_1:84930823-84930842	None:intergenic	35.0%
	CCTTTGTGTCATGATTTAGT+TGG	-	chr3_1:84930820-84930839	Msa0382400:intron	35.0%
!	GATTTAGTTGGTTTCAACCA+TGG	-	chr3_1:84930832-84930851	Msa0382400:intron	35.0%
	TAGGTCTGTCACAAAGTAAT+AGG	+	chr3_1:84930891-84930910	None:intergenic	35.0%
	ATGTATCAAGCAACTCATCT+TGG	-	chr3_1:84930927-84930946	Msa0382400:intron	35.0%
	CTTGTCGATCACAAAGTAAT+AGG	+	chr3_1:84930953-84930972	None:intergenic	35.0%
	AAGACAGTGCAATGTAAACA+CGG	+	chr3_1:84931161-84931180	None:intergenic	35.0%
	GCTGAACATTTACACTGTTA+GGG	+	chr3_1:84931188-84931207	None:intergenic	35.0%
	AGCTGAACATTTACACTGTT+AGG	+	chr3_1:84931189-84931208	None:intergenic	35.0%
	TTCCTTAAACAATGCCCTTA+GGG	+	chr3_1:84931459-84931478	None:intergenic	35.0%
	CAAGACATAATTTCCTCTTG+TGG	+	chr3_1:84931483-84931502	None:intergenic	35.0%
	ATTTCTGTGCATCAGTCTAT+AGG	+	chr3_1:84931707-84931726	None:intergenic	35.0%
	TTCTGCATTTGAATGAGCTA+AGG	-	chr3_1:84931831-84931850	Msa0382400:intron	35.0%
!	GTCAAGATTAGGTCTAAAAC+AGG	+	chr3_1:84931889-84931908	None:intergenic	35.0%
	TTAGACCTAATCTTGACCAT+TGG	-	chr3_1:84931892-84931911	Msa0382400:intron	35.0%
	GTTATCCAATGGTCAAGATT+AGG	+	chr3_1:84931900-84931919	None:intergenic	35.0%
	AATCTTGACCATTGGATAAC+TGG	-	chr3_1:84931900-84931919	Msa0382400:intron	35.0%
	ATCTTGACCATTGGATAACT+GGG	-	chr3_1:84931901-84931920	Msa0382400:intron	35.0%
!	AGGCTTTTAATAGAAGGAAG+TGG	-	chr3_1:84932076-84932095	Msa0382400:intron	35.0%
	CATAGGTTAAGGGAAAACAT+TGG	+	chr3_1:84932254-84932273	None:intergenic	35.0%
!!	TGTTAGTTGCTTGGCTTTTT+AGG	-	chr3_1:84932362-84932381	Msa0382400:CDS	35.0%
!!	GTTAGTTGCTTGGCTTTTTA+GGG	-	chr3_1:84932363-84932382	Msa0382400:CDS	35.0%
	ACAAATAACGATGTCGATGA+TGG	-	chr3_1:84932396-84932415	Msa0382400:intron	35.0%
	CAAGTATTTGTGAGAGATGA+AGG	+	chr3_1:84932794-84932813	None:intergenic	35.0%
!!!	GTTATTTTTGTTGTGCAACG+TGG	-	chr3_1:84932820-84932839	Msa0382400:five_prime_UTR	35.0%
	AGATTAGTGCAGCATCAATG+TGG	+	chr3_1:84929097-84929116	None:intergenic	40.0%
	TGTTGCGAAGATGAAGAAGA+GGG	+	chr3_1:84929171-84929190	None:intergenic	40.0%
	TTGTTGCGAAGATGAAGAAG+AGG	+	chr3_1:84929172-84929191	None:intergenic	40.0%
	TCTTCGCAACAATCACAAAC+CGG	-	chr3_1:84929180-84929199	Msa0382400:three_prime_UTR	40.0%
	AACCAGTTACGTTGCCAAAT+CGG	+	chr3_1:84929258-84929277	None:intergenic	40.0%
	CTGTTGGAATCATCAACACT+GGG	+	chr3_1:84929642-84929661	None:intergenic	40.0%
	ACTGTTGGAATCATCAACAC+TGG	+	chr3_1:84929643-84929662	None:intergenic	40.0%
!!	GAGTAAGCCTTGGCTTTAAA+TGG	-	chr3_1:84929865-84929884	Msa0382400:intron	40.0%
	CCAGCTCATAATATGTCCAT+AGG	+	chr3_1:84930023-84930042	None:intergenic	40.0%
	CCTATGGACATATTATGAGC+TGG	-	chr3_1:84930020-84930039	Msa0382400:intron	40.0%
!	CTGTGTTGATATTGGCACTT+TGG	-	chr3_1:84930089-84930108	Msa0382400:intron	40.0%
	CAAGGTGACACCATTAAAAG+CGG	-	chr3_1:84930188-84930207	Msa0382400:intron	40.0%
	TTGCATGCATCTCCAATATC+AGG	-	chr3_1:84930263-84930282	Msa0382400:intron	40.0%
	AGAAAAGAAAACACACCTCG+AGG	+	chr3_1:84930292-84930311	None:intergenic	40.0%
	GCATTACATATCATCCACAC+AGG	-	chr3_1:84930668-84930687	Msa0382400:intron	40.0%
	ATGAGCTTCCTAGAAGCTAA+GGG	+	chr3_1:84930724-84930743	None:intergenic	40.0%
	GTTCAAATAGCAGGAGTGAT+TGG	+	chr3_1:84930764-84930783	None:intergenic	40.0%
	CCTGTCCGGTTTATAAACAT+TGG	+	chr3_1:84930786-84930805	None:intergenic	40.0%
	CCAATGTTTATAAACCGGAC+AGG	-	chr3_1:84930783-84930802	Msa0382400:intron	40.0%
!	TAGTTGGTTTCAACCATGGT+TGG	-	chr3_1:84930836-84930855	Msa0382400:intron	40.0%
!!	TGAGTTGCTTGATGATGATC+TGG	+	chr3_1:84930862-84930881	None:intergenic	40.0%
	TAAGATGAGCTGCTTAATGG+TGG	+	chr3_1:84930999-84931018	None:intergenic	40.0%
	ACACGGGTAAATAGAAGTCA+AGG	+	chr3_1:84931144-84931163	None:intergenic	40.0%
	AGACAGTGCAATGTAAACAC+GGG	+	chr3_1:84931160-84931179	None:intergenic	40.0%
	TTCAGCTCTATGTAAGCTAG+AGG	-	chr3_1:84931202-84931221	Msa0382400:intron	40.0%
	TCTTGCTAACAAGTACCCTA+AGG	-	chr3_1:84931441-84931460	Msa0382400:intron	40.0%
	CTTGCTAACAAGTACCCTAA+GGG	-	chr3_1:84931442-84931461	Msa0382400:intron	40.0%
!!	TACCCTAAGGGCATTGTTTA+AGG	-	chr3_1:84931454-84931473	Msa0382400:intron	40.0%
	GTTCCTTAAACAATGCCCTT+AGG	+	chr3_1:84931460-84931479	None:intergenic	40.0%
	TTGTTTAAGGAACCCACAAG+AGG	-	chr3_1:84931467-84931486	Msa0382400:intron	40.0%
	TGAGTATATCCATCCAGACA+AGG	-	chr3_1:84931587-84931606	Msa0382400:intron	40.0%
	ACAACTAAACCTTGTCTGGA+TGG	+	chr3_1:84931599-84931618	None:intergenic	40.0%
	TGACATTAGGTCAGTTGCTT+TGG	-	chr3_1:84931940-84931959	Msa0382400:intron	40.0%
	GGAGAAAATGAATCTGACAC+CGG	-	chr3_1:84931964-84931983	Msa0382400:intron	40.0%
	ATGTTACCTCCAATAGTCTC+CGG	+	chr3_1:84931986-84932005	None:intergenic	40.0%
	TAGAAGGAAGTGGAAAGACT+TGG	-	chr3_1:84932086-84932105	Msa0382400:intron	40.0%
	CTTCAGCATATTGACACTTC+AGG	-	chr3_1:84932130-84932149	Msa0382400:intron	40.0%
	AAGAAATACAGTCGGATTGC+TGG	-	chr3_1:84932172-84932191	Msa0382400:intron	40.0%
	AGAAATACAGTCGGATTGCT+GGG	-	chr3_1:84932173-84932192	Msa0382400:intron	40.0%
	GAAGCGAAAAAATGACGCAT+AGG	+	chr3_1:84932271-84932290	None:intergenic	40.0%
	TGTCAGACATGTTAGTTGCT+TGG	-	chr3_1:84932353-84932372	Msa0382400:CDS	40.0%
!!!	CTTGGCTTTTTAGGGTTCAT+TGG	-	chr3_1:84932371-84932390	Msa0382400:CDS	40.0%
	GTTTGCTTTCAGTAACAGGA+AGG	+	chr3_1:84932585-84932604	None:intergenic	40.0%
	GCTTGTTTGCTTTCAGTAAC+AGG	+	chr3_1:84932589-84932608	None:intergenic	40.0%
	TGTAATTGAGAGGCTAGCAT+TGG	-	chr3_1:84932647-84932666	Msa0382400:five_prime_UTR	40.0%
	TTGGTCCTGATAATAGATGC+AGG	-	chr3_1:84932666-84932685	Msa0382400:five_prime_UTR	40.0%
!	TTTGTTGTGCAACGTGGTAA+TGG	-	chr3_1:84932826-84932845	Msa0382400:five_prime_UTR	40.0%
	TTGTTGTGCAACGTGGTAAT+GGG	-	chr3_1:84932827-84932846	Msa0382400:five_prime_UTR	40.0%
	TTCTTCGTGATAATCCTCCC+TGG	+	chr3_1:84929146-84929165	None:intergenic	45.0%
	CTTCGCAACAATCACAAACC+GGG	-	chr3_1:84929181-84929200	Msa0382400:three_prime_UTR	45.0%
	GTATATAATTCGGGTCGACC+CGG	+	chr3_1:84929202-84929221	None:intergenic	45.0%
	ATCCACGATCCATTCCGAAT+CGG	-	chr3_1:84929227-84929246	Msa0382400:three_prime_UTR	45.0%
	AGTTACGTTGCCAAATCGGA+AGG	+	chr3_1:84929254-84929273	None:intergenic	45.0%
!!	TTCCGATTTGGCAACGTAAC+TGG	-	chr3_1:84929253-84929272	Msa0382400:three_prime_UTR	45.0%
	AAACATCAGGATCGAGAGTG+AGG	+	chr3_1:84929338-84929357	None:intergenic	45.0%
	GTGGAAGAAGGAGAAACATC+AGG	+	chr3_1:84929351-84929370	None:intergenic	45.0%
	ATGAAAAACCTCGACGCCTT+CGG	+	chr3_1:84929397-84929416	None:intergenic	45.0%
	CATTCTCATGATGTGCCGTA+TGG	-	chr3_1:84929582-84929601	Msa0382400:intron	45.0%
!	TTCTGGAAGCGGACAACAAT+CGG	-	chr3_1:84929605-84929624	Msa0382400:intron	45.0%
	CAGTTTCAATCCTCGAAGTG+CGG	-	chr3_1:84929843-84929862	Msa0382400:intron	45.0%
!!	GATTGGTTTCCCGGATTAGT+TGG	-	chr3_1:84929908-84929927	Msa0382400:intron	45.0%
!	CCTTGTTTAGCAGAAGTTCC+CGG	+	chr3_1:84930173-84930192	None:intergenic	45.0%
	GATTACAGCACATGAGGACA+AGG	-	chr3_1:84930222-84930241	Msa0382400:intron	45.0%
	AGATGAAAAAGGACCCTGTG+TGG	+	chr3_1:84930685-84930704	None:intergenic	45.0%
	TGCAACTTCCCTTAGCTTCT+AGG	-	chr3_1:84930713-84930732	Msa0382400:intron	45.0%
	GATGAGCTTCCTAGAAGCTA+AGG	+	chr3_1:84930725-84930744	None:intergenic	45.0%
!	GACACAAAGGTTTGTCGGTT+TGG	+	chr3_1:84930810-84930829	None:intergenic	45.0%
	GGCTAAGATGAGCTGCTTAA+TGG	+	chr3_1:84931002-84931021	None:intergenic	45.0%
	GAAGCAGAGCTGAACGAAAA+TGG	-	chr3_1:84931319-84931338	Msa0382400:intron	45.0%
	TCAGTCTATAGGTGGGAACA+TGG	+	chr3_1:84931696-84931715	None:intergenic	45.0%
	CTGTGCATCAGTCTATAGGT+GGG	+	chr3_1:84931703-84931722	None:intergenic	45.0%
	TCTGTGCATCAGTCTATAGG+TGG	+	chr3_1:84931704-84931723	None:intergenic	45.0%
!	CATTAGGTCAGTTGCTTTGG+TGG	-	chr3_1:84931943-84931962	Msa0382400:intron	45.0%
	AATCTGACACCGGAGACTAT+TGG	-	chr3_1:84931974-84931993	Msa0382400:intron	45.0%
	AAGTGGAAAGACTTGGAAGC+AGG	-	chr3_1:84932093-84932112	Msa0382400:intron	45.0%
	GAAATACAGTCGGATTGCTG+GGG	-	chr3_1:84932174-84932193	Msa0382400:intron	45.0%
	AAATACAGTCGGATTGCTGG+GGG	-	chr3_1:84932175-84932194	Msa0382400:intron	45.0%
	GCAAGAGGTGAGAATTTGTC+TGG	-	chr3_1:84932201-84932220	Msa0382400:intron	45.0%
!	AAAAGCGTGCTGACAATGTC+TGG	-	chr3_1:84932539-84932558	Msa0382400:CDS	45.0%
	TCCTGATAATAGATGCAGGC+AGG	-	chr3_1:84932670-84932689	Msa0382400:five_prime_UTR	45.0%
	TTGAATACGTGCGCACTCTT+AGG	-	chr3_1:84932709-84932728	Msa0382400:five_prime_UTR	45.0%
	GCTGCACTAATCTGTTACCG+TGG	-	chr3_1:84929104-84929123	Msa0382400:three_prime_UTR	50.0%
	CCAAATCGGAAGGTCCGATT+CGG	+	chr3_1:84929244-84929263	None:intergenic	50.0%
	CATGATGTGCCGTATGGTTC+TGG	-	chr3_1:84929588-84929607	Msa0382400:intron	50.0%
	TGTCCGCTTCCAGAACCATA+CGG	+	chr3_1:84929600-84929619	None:intergenic	50.0%
	AGCGGACAACAATCGGTTAC+TGG	-	chr3_1:84929612-84929631	Msa0382400:intron	50.0%
	TAAAGCCCAAGGCTTGGGAT+CGG	-	chr3_1:84929799-84929818	Msa0382400:CDS	50.0%
	GGCTTAGGACCAACTAATCC+GGG	+	chr3_1:84929920-84929939	None:intergenic	50.0%
	CGGCTTAGGACCAACTAATC+CGG	+	chr3_1:84929921-84929940	None:intergenic	50.0%
	CCGGGAACTTCTGCTAAACA+AGG	-	chr3_1:84930170-84930189	Msa0382400:intron	50.0%
	AGCACATGAGGACAAGGAAG+TGG	-	chr3_1:84930228-84930247	Msa0382400:intron	50.0%
	TCCAATATCAGGCAACCTCG+AGG	-	chr3_1:84930274-84930293	Msa0382400:intron	50.0%
	ACCTCGAGGTTGCCTGATAT+TGG	+	chr3_1:84930278-84930297	None:intergenic	50.0%
!!	TTTGTCGGTTTGGTCCTGTC+CGG	+	chr3_1:84930800-84930819	None:intergenic	50.0%
	GATGATGATCTGGCCAACCA+TGG	+	chr3_1:84930852-84930871	None:intergenic	50.0%
	GCTCTGCTTCAGCAAAGGAT+AGG	+	chr3_1:84931309-84931328	None:intergenic	50.0%
	GTTCAGCTCTGCTTCAGCAA+AGG	+	chr3_1:84931314-84931333	None:intergenic	50.0%
	AAGCAGCTAAGCGATGCATC+AGG	+	chr3_1:84931356-84931375	None:intergenic	50.0%
	AGACTTGGAAGCAGGATCAG+AGG	-	chr3_1:84932101-84932120	Msa0382400:intron	50.0%
	GGAAGCAGGATCAGAGGTTT+CGG	-	chr3_1:84932107-84932126	Msa0382400:intron	50.0%
	AATGTCTGGTTGGCAGCTGA+AGG	-	chr3_1:84932553-84932572	Msa0382400:CDS	50.0%
	GCCTGCCTGCATCTATTATC+AGG	+	chr3_1:84932674-84932693	None:intergenic	50.0%
	TCTGTTACCGTGGCTTCCTC+AGG	-	chr3_1:84929114-84929133	Msa0382400:three_prime_UTR	55.0%
	GTGTGAACCTGAGGAAGCCA+CGG	+	chr3_1:84929124-84929143	None:intergenic	55.0%
	GCTTCCTCAGGTTCACACCA+GGG	-	chr3_1:84929126-84929145	Msa0382400:three_prime_UTR	55.0%
!!	GTCCGATTCGGAATGGATCG+TGG	+	chr3_1:84929232-84929251	None:intergenic	55.0%
!!	TCGGAAGGTCCGATTCGGAA+TGG	+	chr3_1:84929239-84929258	None:intergenic	55.0%
	CCGAATCGGACCTTCCGATT+TGG	-	chr3_1:84929241-84929260	Msa0382400:three_prime_UTR	55.0%
	CAGGATCGAGAGTGAGGAAG+AGG	+	chr3_1:84929332-84929351	None:intergenic	55.0%
	GAAGCAGAAGCGGTGGAAGA+AGG	+	chr3_1:84929363-84929382	None:intergenic	55.0%
	AAAAACCTCGACGCCTTCGG+AGG	+	chr3_1:84929394-84929413	None:intergenic	55.0%
!!	GTGCCGTATGGTTCTGGAAG+CGG	-	chr3_1:84929594-84929613	Msa0382400:intron	55.0%
	ACACTCCGATCCCAAGCCTT+GGG	+	chr3_1:84929807-84929826	None:intergenic	55.0%
	AAGGCTTACTCCGCACTTCG+AGG	+	chr3_1:84929856-84929875	None:intergenic	55.0%
	TCGAAGTGCGGAGTAAGCCT+TGG	-	chr3_1:84929855-84929874	Msa0382400:intron	55.0%
	CTTTAAATGGGCCCCGCTAG+TGG	-	chr3_1:84929878-84929897	Msa0382400:intron	55.0%
	GCAGATTGTTAGGCCTGAGC+CGG	-	chr3_1:84930151-84930170	Msa0382400:intron	55.0%
	CAGATTGTTAGGCCTGAGCC+GGG	-	chr3_1:84930152-84930171	Msa0382400:intron	55.0%
	TTAGCAGAAGTTCCCGGCTC+AGG	+	chr3_1:84930167-84930186	None:intergenic	55.0%
	CTGACACCGGAGACTATTGG+AGG	-	chr3_1:84931977-84931996	Msa0382400:intron	55.0%
!	GCGTGCTGACAATGTCTGGT+TGG	-	chr3_1:84932543-84932562	Msa0382400:CDS	55.0%
	GGCTTCCTCAGGTTCACACC+AGG	-	chr3_1:84929125-84929144	Msa0382400:three_prime_UTR	60.0%
	TCCTCAGGTTCACACCAGGG+AGG	-	chr3_1:84929129-84929148	Msa0382400:three_prime_UTR	60.0%
	TCCTCCCTGGTGTGAACCTG+AGG	+	chr3_1:84929133-84929152	None:intergenic	60.0%
	GGAAGCAGCGGAAGCAGAAG+CGG	+	chr3_1:84929373-84929392	None:intergenic	60.0%
	CACACTCCGATCCCAAGCCT+TGG	+	chr3_1:84929808-84929827	None:intergenic	60.0%
!	GCGGGGCCCATTTAAAGCCA+AGG	+	chr3_1:84929875-84929894	None:intergenic	60.0%
	AATCCCAGCGTCCACTAGCG+GGG	+	chr3_1:84929892-84929911	None:intergenic	60.0%
	CAATCCCAGCGTCCACTAGC+GGG	+	chr3_1:84929893-84929912	None:intergenic	60.0%
	CCAATCCCAGCGTCCACTAG+CGG	+	chr3_1:84929894-84929913	None:intergenic	60.0%
!!	GGACGCTGGGATTGGTTTCC+CGG	-	chr3_1:84929899-84929918	Msa0382400:intron	60.0%
	GATTGCTGGGGGACAGCAAG+AGG	-	chr3_1:84932186-84932205	Msa0382400:intron	60.0%
	AGCAGCGGAAGCAGAAGCGG+TGG	+	chr3_1:84929370-84929389	None:intergenic	65.0%
	GCTTCCGCTGCTTCCTCCGA+AGG	-	chr3_1:84929378-84929397	Msa0382400:intron	65.0%
	GACGCCTTCGGAGGAAGCAG+CGG	+	chr3_1:84929385-84929404	None:intergenic	65.0%
!!	TGCTTCCTCCGAAGGCGTCG+AGG	-	chr3_1:84929386-84929405	Msa0382400:intron	65.0%
!	CCGCTAGTGGACGCTGGGAT+TGG	-	chr3_1:84929891-84929910	Msa0382400:intron	65.0%
!	TGGGCCCCGCTAGTGGACGC+TGG	-	chr3_1:84929885-84929904	Msa0382400:intron	75.0%
!	GGGCCCCGCTAGTGGACGCT+GGG	-	chr3_1:84929886-84929905	Msa0382400:intron	75.0%

Chromosome	Type	Strat	End	Strand	Name
chr3_1	gene	84928998	84932914	84928998	ID=Msa0382400;Name=Msa0382400
chr3_1	mRNA	84928998	84932914	84928998	ID=Msa0382400-mRNA-1;Parent=Msa0382400;Name=Msa0382400-mRNA-1;_AED=0.08;_eAED=0.08;_QI=299\|0.8\|0.83\|1\|1\|1\|6\|299\|209
chr3_1	exon	84928998	84929389	84928998	ID=Msa0382400-mRNA-1:exon:22229;Parent=Msa0382400-mRNA-1
chr3_1	exon	84929705	84929834	84929705	ID=Msa0382400-mRNA-1:exon:22228;Parent=Msa0382400-mRNA-1
chr3_1	exon	84929914	84929963	84929914	ID=Msa0382400-mRNA-1:exon:22227;Parent=Msa0382400-mRNA-1
chr3_1	exon	84931617	84931757	84931617	ID=Msa0382400-mRNA-1:exon:22226;Parent=Msa0382400-mRNA-1
chr3_1	exon	84932286	84932390	84932286	ID=Msa0382400-mRNA-1:exon:22225;Parent=Msa0382400-mRNA-1
chr3_1	exon	84932505	84932914	84932505	ID=Msa0382400-mRNA-1:exon:22224;Parent=Msa0382400-mRNA-1
chr3_1	five_prime_UTR	84932616	84932914	84932616	ID=Msa0382400-mRNA-1:five_prime_utr;Parent=Msa0382400-mRNA-1
chr3_1	CDS	84932505	84932615	84932505	ID=Msa0382400-mRNA-1:cds;Parent=Msa0382400-mRNA-1
chr3_1	CDS	84932286	84932390	84932286	ID=Msa0382400-mRNA-1:cds;Parent=Msa0382400-mRNA-1
chr3_1	CDS	84931617	84931757	84931617	ID=Msa0382400-mRNA-1:cds;Parent=Msa0382400-mRNA-1
chr3_1	CDS	84929914	84929963	84929914	ID=Msa0382400-mRNA-1:cds;Parent=Msa0382400-mRNA-1
chr3_1	CDS	84929705	84929834	84929705	ID=Msa0382400-mRNA-1:cds;Parent=Msa0382400-mRNA-1
chr3_1	CDS	84929297	84929389	84929297	ID=Msa0382400-mRNA-1:cds;Parent=Msa0382400-mRNA-1
chr3_1	three_prime_UTR	84928998	84929296	84928998	ID=Msa0382400-mRNA-1:three_prime_utr;Parent=Msa0382400-mRNA-1

Gene Sequence

>Msa0382400

ATGGCTCTCGGTTTCTTCGCTCTCGCTATTTTCCTCTTCCTCACTCTCGATCCTGATGTTTCTCCTTCTTCCACCGCTTCTGCTTCCGCTGCTTCCTCCGAAGGCGTCGAGGTTCAGATTACTTATGGTTCGGTGATTAAGTTGATGCATGAGAAGACGAAATTTAGGTTGCATTCTCATGATGTGCCGTATGGTTCTGGAAGCGGACAACAATCGATTGTTAGGCCTGAGCCGGGAACTTCTGCTAAACAAGGTGACACCATTAAAAGCGGAACCATAATTAGATTACAGCACATGAGGACAAGGAAGTGGCTGCACAGCCATTTGCATGCATCTCCAATATCAGGCAACCTCGAGGTCAGTTGCTTTGGTGGAGAAAATGAATCTGACACCGGAGACTATTGGAGGCTTTTAATAGAAGGAAGTGGAAAGACTTGGAAGCAGGATCAGAGGTTTCGGCTTCAGCATATTGACACTTCAGGCTATCTTCATAGTCATGATAAGAAATACAGTCGGATTGCTGGGGGACAGCAAGAGGTTTGTGGTGTTCGTGAAAAGCGTGCTGACAATGTCTGGTTGGCAGCTGAAGGTGTCTACCTTCCTGTTACTGAAAGCAAACAAGCTGAGTAG

Protein sequence

>Msa0382400

MALGFFALAIFLFLTLDPDVSPSSTASASAASSEGVEVQITYGSVIKLMHEKTKFRLHSHDVPYGSGSGQQSIVRPEPGTSAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEVSCFGGENESDTGDYWRLLIEGSGKTWKQDQRFRLQHIDTSGYLHSHDKKYSRIAGGQQEVCGVREKRADNVWLAAEGVYLPVTESKQAE*