AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1133540

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1133540 MtrunA17_Chr8g0388761 99.402 669 4 0 1 669 1 669 0.0 1346
Msa1133540 MtrunA17_Chr8g0388671 96.285 646 23 1 1 646 2 646 0.0 1232
Msa1133540 MtrunA17_Chr7g0262821 64.921 630 214 5 36 661 7 633 0.0 837
Msa1133540 MtrunA17_Chr4g0031321 64.263 638 211 5 36 658 7 642 0.0 831
Msa1133540 MtrunA17_Chr4g0031301 65.961 614 203 4 36 645 7 618 0.0 829
Msa1133540 MtrunA17_Chr7g0223181 65.472 614 206 4 36 645 7 618 0.0 828
Msa1133540 MtrunA17_Chr7g0223291 64.038 634 215 5 36 665 7 631 0.0 827
Msa1133540 MtrunA17_Chr4g0073741 64.423 624 214 5 33 652 3 622 0.0 823
Msa1133540 MtrunA17_Chr2g0284681 55.155 611 248 6 33 633 3 597 0.0 670
Msa1133540 MtrunA17_Chr6g0462601 54.125 606 271 5 39 640 10 612 0.0 662
Msa1133540 MtrunA17_Chr6g0462681 53.542 607 275 5 39 641 10 613 0.0 652
Msa1133540 MtrunA17_Chr7g0223751 54.125 606 267 8 36 635 7 607 0.0 647
Msa1133540 MtrunA17_Chr7g0221661 54.486 613 269 7 36 642 7 615 0.0 640
Msa1133540 MtrunA17_Chr2g0298851 55.628 613 259 9 36 640 7 614 0.0 639
Msa1133540 MtrunA17_Chr7g0233311 53.268 612 276 7 36 640 7 615 0.0 636
Msa1133540 MtrunA17_Chr7g0223741 54.223 592 261 7 36 621 7 594 0.0 632
Msa1133540 MtrunA17_Chr5g0427901 52.006 623 278 8 36 641 7 625 0.0 630
Msa1133540 MtrunA17_Chr2g0293581 53.431 612 275 7 36 640 8 616 0.0 630
Msa1133540 MtrunA17_Chr6g0462771 51.535 619 288 6 39 648 10 625 0.0 622
Msa1133540 MtrunA17_Chr7g0223731 52.815 604 274 8 36 633 7 605 0.0 622
Msa1133540 MtrunA17_Chr6g0462641 50.889 619 292 6 39 648 10 625 0.0 621
Msa1133540 MtrunA17_Chr7g0223711 51.320 606 285 7 36 635 7 608 0.0 619
Msa1133540 MtrunA17_Chr7g0223621 52.554 607 275 9 36 635 7 607 0.0 619
Msa1133540 MtrunA17_Chr7g0223851 53.659 615 270 11 36 641 16 624 0.0 619
Msa1133540 MtrunA17_Chr6g0462711 51.774 620 286 7 39 648 11 627 0.0 618
Msa1133540 MtrunA17_Chr7g0223031 51.895 607 281 8 36 636 7 608 0.0 615
Msa1133540 MtrunA17_Chr7g0223721 52.224 607 279 8 36 635 7 609 0.0 613
Msa1133540 MtrunA17_Chr2g0287631 52.874 609 277 7 39 640 10 615 0.0 612
Msa1133540 MtrunA17_Chr8g0350731 49.768 647 307 9 22 662 21 655 0.0 611
Msa1133540 MtrunA17_Chr7g0225671 52.960 625 280 11 25 641 3 621 0.0 609
Msa1133540 MtrunA17_Chr7g0223801 51.555 611 284 8 36 640 7 611 0.0 608
Msa1133540 MtrunA17_Chr7g0223781 51.882 611 282 7 36 640 7 611 0.0 608
Msa1133540 MtrunA17_Chr4g0040931 51.405 605 283 8 36 633 7 607 0.0 603
Msa1133540 MtrunA17_Chr7g0223701 49.756 615 289 10 36 635 7 616 0.0 596
Msa1133540 MtrunA17_Chr2g0298861 50.000 624 289 11 36 640 7 626 0.0 595
Msa1133540 MtrunA17_Chr7g0248131 51.718 611 279 11 36 635 7 612 0.0 591
Msa1133540 MtrunA17_Chr2g0296391 55.153 524 227 5 36 553 7 528 0.0 587
Msa1133540 MtrunA17_Chr2g0279901 53.276 580 244 10 38 609 56 616 0.0 583
Msa1133540 MtrunA17_Chr4g0049501 53.276 580 245 10 38 609 53 614 0.0 580
Msa1133540 MtrunA17_Chr7g0223631 49.751 603 284 9 36 635 7 593 0.0 578
Msa1133540 MtrunA17_Chr7g0248151 51.530 621 287 10 36 647 7 622 0.0 578
Msa1133540 MtrunA17_Chr7g0217971 51.347 594 260 8 36 626 7 574 0.0 577
Msa1133540 MtrunA17_Chr7g0233301 50.245 613 262 10 36 640 7 584 0.0 573
Msa1133540 MtrunA17_Chr7g0223821 51.129 620 285 11 36 643 7 620 0.0 569
Msa1133540 MtrunA17_Chr6g0462611 51.532 555 260 6 91 641 12 561 0.0 561
Msa1133540 MtrunA17_Chr4g0012541 50.163 614 284 11 36 641 7 606 0.0 561
Msa1133540 MtrunA17_Chr2g0277021 48.892 632 285 12 38 658 71 675 0.0 547
Msa1133540 MtrunA17_Chr7g0223831 49.511 614 269 11 36 641 7 587 0.0 544
Msa1133540 MtrunA17_Chr8g0390821 46.434 659 277 13 39 640 12 651 0.0 540
Msa1133540 MtrunA17_Chr7g0215261 48.534 614 268 11 36 640 7 581 0.0 536
Msa1133540 MtrunA17_Chr7g0223541 49.117 566 273 7 101 662 31 585 0.0 533
Msa1133540 MtrunA17_Chr7g0228281 47.635 613 265 9 36 641 68 631 2.17e-180 527
Msa1133540 MtrunA17_Chr7g0223681 50.000 522 252 7 118 635 2 518 2.90e-174 508
Msa1133540 MtrunA17_Chr2g0331381 49.446 542 205 7 37 573 5 482 5.04e-172 499
Msa1133540 MtrunA17_Chr2g0293601 51.556 514 207 6 36 543 7 484 5.65e-172 499
Msa1133540 MtrunA17_Chr2g0299921 62.565 382 140 3 36 415 1027 1407 2.53e-153 486
Msa1133540 MtrunA17_Chr2g0299921 62.963 378 136 4 39 413 1414 1790 3.32e-144 461
Msa1133540 MtrunA17_Chr2g0299821 59.843 381 146 4 36 410 7 386 3.33e-152 449
Msa1133540 MtrunA17_Chr2g0299821 60.000 100 31 2 473 565 387 484 1.04e-25 111
Msa1133540 MtrunA17_Chr2g0299851 61.417 381 144 3 35 413 1035 1414 2.29e-150 471
Msa1133540 MtrunA17_Chr2g0299791 61.155 381 145 3 36 414 1040 1419 8.69e-150 469
Msa1133540 MtrunA17_Chr6g0462861 41.842 619 320 15 39 641 10 604 1.50e-149 448
Msa1133540 MtrunA17_Chr2g0293561 57.995 369 148 4 36 398 7 374 3.82e-148 435
Msa1133540 MtrunA17_Chr1g0166551 42.384 604 226 11 39 635 6 494 2.57e-141 422
Msa1133540 MtrunA17_Chr2g0299881 57.935 397 160 5 38 428 1038 1433 1.26e-140 446
Msa1133540 MtrunA17_Chr2g0299881 58.730 63 25 1 212 274 1414 1475 4.87e-15 79.3
Msa1133540 MtrunA17_Chr2g0293271 43.277 476 177 9 21 479 7 406 4.76e-115 351
Msa1133540 MtrunA17_Chr1g0151991 59.091 286 110 4 36 315 7 291 2.96e-111 337
Msa1133540 MtrunA17_Chr7g0245521 60.300 267 99 4 36 296 7 272 1.67e-105 321
Msa1133540 MtrunA17_Chr7g0245531 46.906 307 160 3 329 635 2 305 1.40e-85 271
Msa1133540 MtrunA17_Chr5g0394391 32.950 522 301 12 29 520 19 521 1.69e-81 269
Msa1133540 MtrunA17_Chr6g0462751 41.834 349 141 5 94 437 12 303 1.73e-81 260
Msa1133540 MtrunA17_Chr6g0462631 44.179 335 138 5 113 441 6 297 6.40e-81 258
Msa1133540 MtrunA17_Chr7g0223761 37.931 377 189 3 265 640 3 335 1.64e-80 259
Msa1133540 MtrunA17_Chr1g0152001 47.475 297 150 6 340 635 2 293 2.62e-78 252
Msa1133540 MtrunA17_Chr4g0004331 36.387 382 236 4 37 413 2 381 1.20e-76 262
Msa1133540 MtrunA17_Chr2g0331901 32.112 464 292 7 37 483 2 459 3.00e-74 256
Msa1133540 MtrunA17_Chr3g0098761 31.034 493 320 11 37 520 2 483 1.86e-73 252
Msa1133540 MtrunA17_Chr5g0444001 32.947 431 275 6 37 457 2 428 2.14e-71 241
Msa1133540 MtrunA17_Chr7g0223671 60.541 185 68 3 101 281 8 191 4.71e-70 226
Msa1133540 MtrunA17_Chr1g0188601 58.163 196 77 3 119 310 1 195 9.64e-69 223
Msa1133540 MtrunA17_Chr1g0188611 42.905 296 158 4 346 640 1 286 5.86e-62 208
Msa1133540 MtrunA17_Chr6g0462791 58.084 167 68 1 143 307 9 175 1.47e-61 203
Msa1133540 MtrunA17_Chr3g0120101 28.932 515 322 12 12 496 8 508 2.43e-61 220
Msa1133540 MtrunA17_Chr7g0223771 60.366 164 56 4 123 278 4 166 1.82e-56 189
Msa1133540 MtrunA17_Chr4g0064621 30.224 536 340 14 39 548 141 668 1.49e-54 198
Msa1133540 MtrunA17_Chr4g0060241 29.880 502 318 12 39 522 21 506 1.56e-53 192
Msa1133540 MtrunA17_Chr4g0046881 62.687 134 47 1 162 292 14 147 3.22e-52 177
Msa1133540 MtrunA17_Chr5g0394221 33.333 312 193 7 307 614 51 351 1.95e-47 171
Msa1133540 MtrunA17_Chr5g0442171 32.537 335 200 8 197 517 1 323 1.07e-46 168
Msa1133540 MtrunA17_Chr7g0223861 62.121 132 45 3 105 232 4 134 1.72e-45 158
Msa1133540 MtrunA17_Chr6g0462691 52.518 139 66 0 346 484 1 139 8.76e-44 154
Msa1133540 MtrunA17_Chr6g0462701 43.548 186 74 4 113 292 6 166 9.00e-40 144
Msa1133540 MtrunA17_Chr7g0245541 39.604 202 120 2 442 643 1 200 1.60e-39 144
Msa1133540 MtrunA17_Chr4g0046871 54.455 101 45 1 360 460 6 105 5.45e-31 117
Msa1133540 MtrunA17_Chr6g0481391 47.154 123 60 3 65 186 13 131 2.85e-29 112
Msa1133540 MtrunA17_Chr5g0394231 32.000 225 103 4 101 323 5 181 4.88e-28 111
Msa1133540 MtrunA17_Chr6g0462621 70.968 62 18 0 39 100 10 71 3.39e-24 96.7
Msa1133540 MtrunA17_Chr7g0223691 70.149 67 18 1 36 100 7 73 3.65e-23 93.6
Msa1133540 MtrunA17_Chr1g0188591 64.179 67 22 1 36 100 7 73 1.11e-22 92.8
Msa1133540 MtrunA17_Chr6g0481381 60.274 73 26 1 204 273 2 74 3.42e-22 94.7
Msa1133540 MtrunA17_Chr6g0481381 39.000 100 59 2 541 639 75 173 7.17e-11 62.0
Msa1133540 MtrunA17_Chr2g0284661 54.118 85 39 0 390 474 59 143 7.57e-22 92.0
Msa1133540 MtrunA17_Chr5g0442161 33.766 154 89 4 39 184 29 177 1.87e-17 80.9
Msa1133540 MtrunA17_Chr4g0064651 38.710 93 57 0 422 514 29 121 1.62e-16 76.3
Msa1133540 MtrunA17_Chr2g0299941 63.636 55 20 0 424 478 23 77 3.12e-15 71.6
Msa1133540 MtrunA17_Chr7g0223871 38.583 127 74 3 517 641 7 131 4.88e-14 69.7
Msa1133540 MtrunA17_Chr7g0221651 38.095 84 52 0 239 322 1 84 1.12e-13 67.0
Msa1133540 MtrunA17_Chr7g0223791 40.426 94 55 1 507 600 89 181 2.24e-13 68.9
Msa1133540 MtrunA17_Chr7g0223791 48.780 82 34 3 83 164 18 91 2.87e-13 68.6
Msa1133540 MtrunA17_Chr7g0223881 43.056 72 40 1 315 386 12 82 5.06e-12 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1133540 AT5G42020.1 89.836 669 67 1 1 669 1 668 0.0 1221
Msa1133540 AT5G28540.1 91.190 647 56 1 1 647 1 646 0.0 1208
Msa1133540 AT5G42020.3 91.091 651 57 1 19 669 24 673 0.0 1207
Msa1133540 AT1G09080.1 77.419 651 142 2 1 647 11 660 0.0 1016
Msa1133540 AT1G09080.2 77.743 647 137 2 1 647 11 650 0.0 1011
Msa1133540 AT5G42020.2 77.015 670 96 5 1 669 1 613 0.0 998
Msa1133540 AT3G12580.1 64.547 629 217 4 36 660 7 633 0.0 832
Msa1133540 AT3G09440.1 66.234 616 198 5 36 645 7 618 0.0 828
Msa1133540 AT3G09440.4 66.234 616 198 5 36 645 7 618 0.0 828
Msa1133540 AT3G09440.2 66.234 616 198 5 36 645 7 618 0.0 828
Msa1133540 AT3G09440.3 66.234 616 198 5 36 645 7 618 0.0 828
Msa1133540 AT5G02500.1 64.984 614 209 4 36 645 7 618 0.0 824
Msa1133540 AT1G16030.1 63.550 631 223 5 33 659 3 630 0.0 824
Msa1133540 AT5G02490.1 64.984 614 209 4 36 645 7 618 0.0 820
Msa1133540 AT1G56410.1 62.704 614 221 4 36 645 7 616 0.0 789
Msa1133540 AT5G09590.1 54.138 580 240 11 38 609 59 620 0.0 584
Msa1133540 AT4G37910.1 54.310 580 239 11 38 609 54 615 0.0 560
Msa1133540 AT4G37910.2 54.310 580 239 11 38 609 54 615 0.0 560
Msa1133540 AT4G24280.1 50.934 589 270 11 38 621 80 654 0.0 548
Msa1133540 AT5G49910.1 49.196 622 292 13 38 654 80 682 0.0 547
Msa1133540 AT5G02500.2 67.010 388 123 3 36 419 7 393 0.0 530
Msa1133540 AT5G02500.2 48.077 104 53 1 542 645 386 488 1.98e-25 111
Msa1133540 AT1G11660.4 28.356 663 400 14 37 639 2 649 7.36e-82 275
Msa1133540 AT1G11660.3 28.356 663 400 14 37 639 2 649 7.36e-82 275
Msa1133540 AT1G11660.1 28.356 663 400 14 37 639 2 649 7.36e-82 275
Msa1133540 AT2G32120.1 32.877 511 312 10 39 534 31 525 2.47e-77 258
Msa1133540 AT2G32120.2 32.877 511 312 10 39 534 31 525 2.47e-77 258
Msa1133540 AT1G79930.2 32.159 454 285 7 37 473 2 449 3.23e-75 257
Msa1133540 AT1G79930.1 32.159 454 285 7 37 473 2 449 5.96e-75 258
Msa1133540 AT1G79920.3 31.718 454 287 7 37 473 2 449 4.29e-74 253
Msa1133540 AT1G79920.2 31.718 454 287 7 37 473 2 449 4.29e-74 253
Msa1133540 AT1G79920.4 31.718 454 287 7 37 473 2 449 4.29e-74 253
Msa1133540 AT1G79920.1 31.718 454 287 7 37 473 2 449 5.05e-74 253
Msa1133540 AT1G11660.2 28.275 626 374 14 74 639 2 612 9.41e-73 249
Msa1133540 AT4G16660.1 26.075 721 403 21 36 639 24 731 8.10e-63 224
Msa1133540 AT4G16660.2 26.075 721 403 21 36 639 48 755 1.00e-62 224

Find 219 sgRNAs with CRISPR-Local

Find 314 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACATCAAAGATGGTCCTTTC+AGG 0.185011 7_3:-87066543 None:intergenic
ACCAAGTTAGGGACTGTTAT+TGG 0.230124 7_3:+87066357 Msa1133540:CDS
ACCGCTGCTGCCATTGCTTA+TGG 0.244088 7_3:+87067088 Msa1133540:CDS
AACATTCTTGTCTTTGATCT+TGG 0.281163 7_3:+87067136 Msa1133540:CDS
GCAAACAACTGTTTCTATTC+AGG 0.282305 7_3:+87068097 Msa1133540:CDS
GGAGCTCCAGGTGGTGCATC+AGG 0.283486 7_3:+87068859 Msa1133540:CDS
TGGTAAACAGCAGTGATAAT+TGG 0.285966 7_3:-87068826 None:intergenic
CTCGGGAACTTTGATTTGTC+TGG 0.291494 7_3:+87068276 Msa1133540:CDS
TTCAAAAGTTGTTGTACCTT+TGG 0.293588 7_3:-87067705 None:intergenic
TTTGATGTCAAGAGACTTAT+CGG 0.304645 7_3:+87066558 Msa1133540:CDS
GAGGAAGGGACCACCAAGTT+AGG 0.330316 7_3:+87066345 Msa1133540:CDS
CAAACGGTATTCTAAATGTT+AGG 0.333992 7_3:+87068455 Msa1133540:CDS
GTTTGTCCTTGTCACTGATT+TGG 0.335858 7_3:-87068663 None:intergenic
TATTTGTGTTTGCTCACATT+TGG 0.338782 7_3:+87068928 Msa1133540:three_prime_UTR
GTGGGGATGACAGTGTTTCT+AGG 0.341786 7_3:-87068038 None:intergenic
TGCTTCTTTCTTCAGATTTG+AGG 0.345147 7_3:+87066672 Msa1133540:intron
ATCTATGAATGAAAATTTCA+TGG 0.348370 7_3:-87069050 None:intergenic
ACCGACGATGAGAGATTGAT+TGG 0.362358 7_3:+87066489 Msa1133540:CDS
AAGGATGCCGGTGTCATTGC+TGG 0.366360 7_3:+87067034 Msa1133540:CDS
TCACAGGTCCCATTGTCTTC+CGG 0.366501 7_3:-87067605 None:intergenic
CTTCTCACCATCATCTCCTT+AGG 0.367766 7_3:+87065615 Msa1133540:CDS
CTTAATTTCGAACATGTCAT+TGG 0.368118 7_3:-87065461 None:intergenic
CCAAGTTAGGGACTGTTATT+GGG 0.369182 7_3:+87066358 Msa1133540:CDS
CTTGTCTTTGATCTTGGAGG+TGG 0.371703 7_3:+87067142 Msa1133540:CDS
CCTTCCCCTGATGCACCACC+TGG 0.374305 7_3:-87068865 None:intergenic
TGGCTCGCTCTTCTTCTTGC+GGG 0.374938 7_3:+87065583 Msa1133540:CDS
ACTGTTATTGGGATAGATCT+TGG 0.377061 7_3:+87066369 Msa1133540:CDS
ACTCTTCTTTCTCAACAGTT+TGG 0.379400 7_3:-87068765 None:intergenic
CCATTCAAGTGCTTCTTTCA+CGG 0.386836 7_3:-87068731 None:intergenic
ACAAAGGATTGCCGTCTTCT+CGG 0.387262 7_3:+87068258 Msa1133540:CDS
CTTCACTTTCTTGTCTTCCT+CGG 0.392206 7_3:-87068587 None:intergenic
CCAAAGGCAACTGCTTCATC+AGG 0.398543 7_3:-87067768 None:intergenic
TTTACTCTGACCTGAATGTA+TGG 0.402451 7_3:-87066757 None:intergenic
ATTCTTGTCTTTGATCTTGG+AGG 0.402766 7_3:+87067139 Msa1133540:CDS
TTTCTTCAGATTTGAGGATA+AGG 0.403180 7_3:+87066678 Msa1133540:intron
CATCAAAGATGGTCCTTTCA+GGG 0.407212 7_3:-87066542 None:intergenic
AGTTGAACAATGACTTGTTC+CGG 0.409326 7_3:+87067586 Msa1133540:CDS
CAAAGGATTGCCGTCTTCTC+GGG 0.410284 7_3:+87068259 Msa1133540:CDS
TTACAGCTTTCTGTACTGTT+TGG 0.415343 7_3:+87069131 Msa1133540:three_prime_UTR
TGGGGAGGCTGCGAAGAATC+TGG 0.418293 7_3:+87066509 Msa1133540:CDS
TACATATGTTAGAATGTTGA+TGG 0.419263 7_3:+87069238 Msa1133540:three_prime_UTR
GATCACCATTACAAATGAAA+AGG 0.423968 7_3:+87068510 Msa1133540:CDS
GTATCCAGATATCCTTCTCT+TGG 0.424894 7_3:+87067956 Msa1133540:intron
GTCCTAACTCGATTTGCAAT+TGG 0.428710 7_3:+87065426 Msa1133540:five_prime_UTR
GGTAAACAGCAGTGATAATT+GGG 0.429598 7_3:-87068825 None:intergenic
ATCATGGCACTGACTTCCTC+AGG 0.433544 7_3:-87066805 None:intergenic
ATTGATGAGATTGTTCTTGT+TGG 0.434577 7_3:+87067666 Msa1133540:CDS
CTGGCTACTAAGAGCTCTCT+TGG 0.435105 7_3:-87067484 None:intergenic
CCCAATAACAGTCCCTAACT+TGG 0.435276 7_3:-87066358 None:intergenic
GATGTTGCACCTCTTACCCT+TGG 0.436670 7_3:+87067978 Msa1133540:CDS
TATTATGAATAGGTGTTTGA+AGG 0.440657 7_3:+87068222 Msa1133540:intron
CTTCATCTTAGTCAGAATCA+TGG 0.442913 7_3:-87066821 None:intergenic
AAACAGTTGTTTGCTGATCC+TGG 0.445328 7_3:-87068088 None:intergenic
TGCAACATCTGCTGCAAAAG+AGG 0.446763 7_3:+87066326 Msa1133540:CDS
CAAGTTGGAATCAGATGAAA+AGG 0.446989 7_3:+87068693 Msa1133540:CDS
CAAAGGTCACTTCAATTTGA+GGG 0.447858 7_3:-87068423 None:intergenic
GGACTTTGATCAGAGAATAA+TGG 0.449888 7_3:+87067368 Msa1133540:CDS
TCAAAGGTCACTTCAATTTG+AGG 0.450757 7_3:-87068424 None:intergenic
CAGAGGTCAGGTGGAGCTCC+AGG 0.453414 7_3:+87068847 Msa1133540:CDS
CCTGATGAAGCAGTTGCCTT+TGG 0.453901 7_3:+87067768 Msa1133540:CDS
AGCAATGACACCGGCATCCT+TGG 0.458285 7_3:-87067032 None:intergenic
CCGACGATGAGAGATTGATT+GGG 0.463196 7_3:+87066490 Msa1133540:CDS
GACTTGTTCCGGAAGACAAT+GGG 0.468406 7_3:+87067597 Msa1133540:CDS
GTTTCAATTCCAAGGGTAAG+AGG 0.470308 7_3:-87067987 None:intergenic
GTATCTTTCTTCTAATCCTA+CGG 0.471345 7_3:-87069218 None:intergenic
GACCAATTGCAAATCGAGTT+AGG 0.472946 7_3:-87065428 None:intergenic
GGATGGAAAACCATACATTC+AGG 0.477959 7_3:+87066747 Msa1133540:CDS
TCGTCCATTGCCTTCTTCAC+AGG 0.478204 7_3:-87067621 None:intergenic
TGAAAAGGGACGCCTGAGCC+AGG 0.478721 7_3:+87068525 Msa1133540:CDS
GGTCAATTTCCTCCTGGCTC+AGG 0.479380 7_3:-87068537 None:intergenic
TTTGAGGTTCTTTCTACAAA+CGG 0.480420 7_3:+87067205 Msa1133540:CDS
CTCCAACAGTTTCAATTCCA+AGG 0.480598 7_3:-87067995 None:intergenic
CGGTTCTCTGCATAAACGCC+CGG 0.484216 7_3:-87069198 None:intergenic
TCCTTGTTGACAATCTTGTA+AGG 0.485086 7_3:-87066727 None:intergenic
ATGGCTCGCTCTTCTTCTTG+CGG 0.485978 7_3:+87065582 Msa1133540:CDS
TTTCCACACGGACTTGGTGC+TGG 0.487623 7_3:-87067503 None:intergenic
TGCTGCCATTGCTTATGGAT+TGG 0.489882 7_3:+87067093 Msa1133540:CDS
GATGCCGTGGTCACTGTCCC+AGG 0.494172 7_3:+87066880 Msa1133540:CDS
GTCTTCCTCGGCAAACTCCT+CGG 0.495002 7_3:-87068575 None:intergenic
CCTGGTAGGTGGTAAACACC+TGG 0.496443 7_3:-87068070 None:intergenic
AATGACACCGGCATCCTTGG+TGG 0.499327 7_3:-87067029 None:intergenic
CGCAGTAGAGCGACTTACAA+AGG 0.501070 7_3:+87065355 Msa1133540:five_prime_UTR
ATCACCATTACAAATGAAAA+GGG 0.502193 7_3:+87068511 Msa1133540:CDS
ACTCAATTTCCACACGGACT+TGG 0.504632 7_3:-87067509 None:intergenic
CTGGAGCTCCACCTGACCTC+TGG 0.505070 7_3:-87068846 None:intergenic
TCTAGCTCTACTTTAGAAGC+GGG 0.505207 7_3:-87068953 None:intergenic
CTTCAATGATGCTCAGAGGC+AGG 0.507132 7_3:+87067006 Msa1133540:CDS
GACAATGGGACCTGTGAAGA+AGG 0.509040 7_3:+87067611 Msa1133540:CDS
AGTGATAATTGGGTTGCAAA+CGG 0.511011 7_3:-87068815 None:intergenic
ACCCTTGGAATTGAAACTGT+TGG 0.511117 7_3:+87067993 Msa1133540:CDS
GAAAGAAGCACTTGAATGGC+TGG 0.513283 7_3:+87068735 Msa1133540:CDS
GCTTATGGATTGGACAAGAA+AGG 0.514548 7_3:+87067103 Msa1133540:CDS
TCTATGAATGAAAATTTCAT+GGG 0.516037 7_3:-87069049 None:intergenic
CATGATTCTGACTAAGATGA+AGG 0.516191 7_3:+87066822 Msa1133540:CDS
TCCTTGCACTGCAGCACCAA+AGG 0.516370 7_3:-87067784 None:intergenic
AAACGGTATTCTAAATGTTA+GGG 0.516624 7_3:+87068456 Msa1133540:CDS
GAGCTCCAGGTGGTGCATCA+GGG 0.517615 7_3:+87068860 Msa1133540:CDS
CCATCCGGTCAATTTCCTCC+TGG 0.517789 7_3:-87068543 None:intergenic
TCAAATCGAGCACGGGTAAG+TGG 0.518725 7_3:-87067561 None:intergenic
AAGAAGGCAATGGACGATGC+TGG 0.518963 7_3:+87067627 Msa1133540:CDS
GAAGGATTACTTTGATGGAA+AGG 0.521373 7_3:+87067725 Msa1133540:CDS
GATACGATTTCCTTGGTCGT+TGG 0.522054 7_3:-87066445 None:intergenic
GGACAAACTTGCTGACAAGT+TGG 0.525676 7_3:+87068678 Msa1133540:CDS
AAAACAAACCTTGGAGCTGG+TGG 0.525948 7_3:-87068303 None:intergenic
TACAAGATTGTCAACAAGGA+TGG 0.525974 7_3:+87066730 Msa1133540:CDS
AGGAAGGGACCACCAAGTTA+GGG 0.527633 7_3:+87066346 Msa1133540:CDS
AGCAAGGACAACAGAGCACT+TGG 0.529505 7_3:+87067435 Msa1133540:CDS
ATAAGCAATGGCAGCAGCGG+TGG 0.530847 7_3:-87067086 None:intergenic
TGATGGAAAGGAACCAAACA+AGG 0.531735 7_3:+87067737 Msa1133540:CDS
ACTGCTGTTTACCAGAGGTC+AGG 0.531930 7_3:+87068835 Msa1133540:CDS
ATAATTACCTAAGGAGATGA+TGG 0.532489 7_3:-87065622 None:intergenic
ACCGTTTGCATCTACTTCAA+AGG 0.532713 7_3:-87068440 None:intergenic
GAAATCGTATCACACCATCA+TGG 0.533173 7_3:+87066457 Msa1133540:CDS
AGGCAGGCCACCAAGGATGC+CGG 0.534449 7_3:+87067022 Msa1133540:CDS
AATAGGTGTTTGAAGGTGAG+AGG 0.535211 7_3:+87068229 Msa1133540:intron
CCTCGGCTTCACGAACCATC+CGG 0.536252 7_3:-87068558 None:intergenic
GATGAGATTGTTCTTGTTGG+TGG 0.537949 7_3:+87067669 Msa1133540:CDS
AAATCGTATCACACCATCAT+GGG 0.540268 7_3:+87066458 Msa1133540:CDS
CCGTGAAAGAAGCACTTGAA+TGG 0.543546 7_3:+87068731 Msa1133540:CDS
TGGCAGCTGTCAACCCTGAA+AGG 0.545326 7_3:+87066529 Msa1133540:CDS
ACAAACGGAGATACCCATCT+TGG 0.546553 7_3:+87067220 Msa1133540:CDS
TAGAAATGATGAGAATTAGT+AGG 0.546567 7_3:+87068972 Msa1133540:three_prime_UTR
TGTGTTGGTGTTTACAAGAA+CGG 0.547276 7_3:+87066405 Msa1133540:CDS
AAATGTTAGGGCAGAAGACA+AGG 0.547526 7_3:+87068468 Msa1133540:CDS
GAGCACTTGGAAAGCTGAGG+AGG 0.547900 7_3:+87067448 Msa1133540:CDS
CTTGGAATTGAAACTGTTGG+AGG 0.549933 7_3:+87067996 Msa1133540:CDS
TTCTAGCTCTACTTTAGAAG+CGG 0.550863 7_3:-87068954 None:intergenic
GAAACCGCTGAAGCATTCCT+TGG 0.551326 7_3:+87066844 Msa1133540:CDS
AAGTCTCTTGACATCAAAGA+TGG 0.553461 7_3:-87066553 None:intergenic
ATAAGTACTCACCTCCAAGA+TGG 0.554153 7_3:-87067234 None:intergenic
GCCTTTGGTGCTGCAGTGCA+AGG 0.554487 7_3:+87067783 Msa1133540:CDS
CACAAAACAAACCTTGGAGC+TGG 0.555992 7_3:-87068306 None:intergenic
AGCTCCAGGTGGTGCATCAG+GGG 0.556960 7_3:+87068861 Msa1133540:CDS
ATACATTCAGGTCAGAGTAA+AGG 0.559988 7_3:+87066759 Msa1133540:CDS
ACCTTTGAAGTAGATGCAAA+CGG 0.560638 7_3:+87068439 Msa1133540:CDS
CCAGGTGGTGCATCAGGGGA+AGG 0.561188 7_3:+87068865 Msa1133540:CDS
TGCTCAGAGGCAGGCCACCA+AGG 0.561411 7_3:+87067015 Msa1133540:CDS
CCAGGTGTTTACCACCTACC+AGG 0.561692 7_3:+87068070 Msa1133540:CDS
TTCCTCAGGGCTGAACACCT+TGG 0.565203 7_3:-87066791 None:intergenic
CTGGAATCCCACCAGCTCCA+AGG 0.566039 7_3:+87068295 Msa1133540:CDS
ACATCTGCTGCAAAAGAGGA+AGG 0.567823 7_3:+87066330 Msa1133540:CDS
GCGTTTATGCAGAGAACCGT+AGG 0.568337 7_3:+87069202 Msa1133540:three_prime_UTR
CCCAATCAATCTCTCATCGT+CGG 0.570425 7_3:-87066490 None:intergenic
TAAGTACTCACCTCCAAGAT+GGG 0.574552 7_3:-87067233 None:intergenic
TGGTGCATCAGGGGAAGGAG+AGG 0.575558 7_3:+87068870 Msa1133540:CDS
TCCAACAGTTTCAATTCCAA+GGG 0.575984 7_3:-87067994 None:intergenic
TGACTTGTTCCGGAAGACAA+TGG 0.576660 7_3:+87067596 Msa1133540:CDS
TCCTTACAAGATTGTCAACA+AGG 0.577546 7_3:+87066726 Msa1133540:CDS
AATAACAGTCCCTAACTTGG+TGG 0.577985 7_3:-87066355 None:intergenic
AATCAAAGTTCCCGAGAAGA+CGG 0.581537 7_3:-87068269 None:intergenic
AACGGAGATACCCATCTTGG+AGG 0.583876 7_3:+87067223 Msa1133540:CDS
GCAGTAGAGCGACTTACAAA+GGG 0.585239 7_3:+87065356 Msa1133540:five_prime_UTR
TCCATAAGCAATGGCAGCAG+CGG 0.585512 7_3:-87067089 None:intergenic
CTTGTCCAATCCATAAGCAA+TGG 0.592089 7_3:-87067098 None:intergenic
CAACTCTTCAAATCGAGCAC+GGG 0.593000 7_3:-87067568 None:intergenic
TGAAGGAAAGAATTGATGCT+CGG 0.593052 7_3:+87068605 Msa1133540:CDS
CCAGGAGGAAATTGACCGGA+TGG 0.593074 7_3:+87068543 Msa1133540:CDS
TCAACTCTTCAAATCGAGCA+CGG 0.593848 7_3:-87067569 None:intergenic
AGGGCAGAAGACAAGGGCAC+AGG 0.595427 7_3:+87068475 Msa1133540:CDS
CACACAAGAGGCAATCCCAT+TGG 0.596022 7_3:+87065395 Msa1133540:five_prime_UTR
GGAACAACATATTCATGTGT+TGG 0.597629 7_3:+87066390 Msa1133540:CDS
ATGGTGTGATACGATTTCCT+TGG 0.600611 7_3:-87066452 None:intergenic
GCTGTTTACCAGAGGTCAGG+TGG 0.602705 7_3:+87068838 Msa1133540:CDS
CCGGATGGTTCGTGAAGCCG+AGG 0.603140 7_3:+87068558 Msa1133540:CDS
TGAGCCAGGAGGAAATTGAC+CGG 0.604755 7_3:+87068539 Msa1133540:CDS
AAAGGTCACTTCAATTTGAG+GGG 0.605663 7_3:-87068422 None:intergenic
GAGGTGCAACATCCAAGAGA+AGG 0.607551 7_3:-87067968 None:intergenic
TAAGCAATGGCAGCAGCGGT+GGG 0.609672 7_3:-87067085 None:intergenic
AGCACTTGGAAAGCTGAGGA+GGG 0.611229 7_3:+87067449 Msa1133540:CDS
CGATGAGAGATTGATTGGGG+AGG 0.612921 7_3:+87066494 Msa1133540:CDS
CTTGCCAAGGAATGCTTCAG+CGG 0.613919 7_3:-87066848 None:intergenic
ACATATGTTAGAATGTTGAT+GGG 0.614530 7_3:+87069239 Msa1133540:three_prime_UTR
GACATGTTCCTACACACAAG+AGG 0.620463 7_3:+87065383 Msa1133540:five_prime_UTR
CGAGGAAGACAAGAAAGTGA+AGG 0.622597 7_3:+87068588 Msa1133540:CDS
GCATAGCAAGGATATTAGCA+AGG 0.623368 7_3:+87067419 Msa1133540:CDS
CGACGATGAGAGATTGATTG+GGG 0.628193 7_3:+87066491 Msa1133540:CDS
TGTTTGCTGATCCTGGTAGG+TGG 0.630248 7_3:-87068081 None:intergenic
ATGAGAATTAGTAGGTCAAG+CGG 0.630667 7_3:+87068980 Msa1133540:three_prime_UTR
CAAGACTATTCGTGATGCCG+TGG 0.630982 7_3:+87066867 Msa1133540:CDS
GGTTCTCTGCATAAACGCCC+GGG 0.633048 7_3:-87069197 None:intergenic
ACATGTCATTGGTGATTACG+TGG 0.633496 7_3:-87065450 None:intergenic
GAAATCATAGCCAACGACCA+AGG 0.633608 7_3:+87066435 Msa1133540:CDS
CTGGTAGGTGGTAAACACCT+GGG 0.633786 7_3:-87068069 None:intergenic
TCTTTGAATCACAACAAAGA+CGG 0.634288 7_3:+87065540 Msa1133540:five_prime_UTR
AGGTCAGGTGGAGCTCCAGG+TGG 0.634814 7_3:+87068850 Msa1133540:CDS
TTCTTGTTGGTGGAAGCACA+AGG 0.637706 7_3:+87067679 Msa1133540:CDS
AAACAAACCTTGGAGCTGGT+GGG 0.639146 7_3:-87068302 None:intergenic
GGGACCTGTGAAGAAGGCAA+TGG 0.639949 7_3:+87067617 Msa1133540:CDS
TTCACCTGGGACAGTGACCA+CGG 0.640825 7_3:-87066884 None:intergenic
TGGGATTGCCTCTTGTGTGT+AGG 0.640932 7_3:-87065391 None:intergenic
AGTTGTTTGCTGATCCTGGT+AGG 0.644960 7_3:-87068084 None:intergenic
TGAAGCCGAGGAGTTTGCCG+AGG 0.647044 7_3:+87068570 Msa1133540:CDS
TATGGATTGGACAAGAAAGG+TGG 0.647597 7_3:+87067106 Msa1133540:CDS
CAAAGGCAACTGCTTCATCA+GGG 0.652946 7_3:-87067767 None:intergenic
GATGGAAAGGAACCAAACAA+GGG 0.654365 7_3:+87067738 Msa1133540:CDS
AGTAAAGGATGGTGAGACCA+AGG 0.655359 7_3:+87066774 Msa1133540:CDS
TGTCATTGCTGGTTTGAACG+TGG 0.655475 7_3:+87067045 Msa1133540:CDS
TTATCACTGCTGTTTACCAG+AGG 0.655496 7_3:+87068830 Msa1133540:CDS
CATCTGCTGCAAAAGAGGAA+GGG 0.658549 7_3:+87066331 Msa1133540:CDS
ATGGAAAGGAACCAAACAAG+GGG 0.659203 7_3:+87067739 Msa1133540:CDS
ATTCAGGTCAGAGTAAAGGA+TGG 0.659644 7_3:+87066763 Msa1133540:CDS
TCATGGCACTGACTTCCTCA+GGG 0.661707 7_3:-87066804 None:intergenic
GCAAGAAGAAGAGCGAGCCA+TGG 0.662253 7_3:-87065580 None:intergenic
ACAGAGCACTTGGAAAGCTG+AGG 0.662613 7_3:+87067445 Msa1133540:CDS
GTTCAAACCAGCAATGACAC+CGG 0.667444 7_3:-87067041 None:intergenic
TCGGTGAAAGAAACCCATGA+TGG 0.669628 7_3:-87066471 None:intergenic
CATCACGAATAGTCTTGCCA+AGG 0.671739 7_3:-87066861 None:intergenic
GACCAAGGTGTTCAGCCCTG+AGG 0.674395 7_3:+87066789 Msa1133540:CDS
TAGCCAGCACCAAGTCCGTG+TGG 0.679452 7_3:+87067500 Msa1133540:CDS
TGGAAGCACAAGGATTCCAA+AGG 0.684118 7_3:+87067689 Msa1133540:CDS
AATGTTAGGGCAGAAGACAA+GGG 0.691069 7_3:+87068469 Msa1133540:CDS
AGGTGAGAGGAGTCTCACAA+AGG 0.713013 7_3:+87068242 Msa1133540:CDS
TGATACATCTCACAACACCA+TGG 0.713815 7_3:+87065563 Msa1133540:exon
AAAGGGACGCCTGAGCCAGG+AGG 0.717721 7_3:+87068528 Msa1133540:CDS
CTTACTTCAATGATGCTCAG+AGG 0.721672 7_3:+87067002 Msa1133540:CDS
AGTATCTTGACAATTGACAA+TGG 0.727159 7_3:+87067178 Msa1133540:CDS
GAGGGTGGTGAAGAAACCAA+AGG 0.727490 7_3:+87067822 Msa1133540:CDS
AAAGTGACTCAATTTCCACA+CGG 0.743191 7_3:-87067515 None:intergenic
TGGAAAGGAACCAAACAAGG+GGG 0.770257 7_3:+87067740 Msa1133540:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAATTAACAGTCTTTAAA+AGG - chr7_3:87065947-87065966 None:intergenic 15.0%
!! AACATAAATCAACTATTTAA+AGG - chr7_3:87066191-87066210 None:intergenic 15.0%
!! AAAACTCAAAACATTTAAAT+CGG - chr7_3:87066264-87066283 None:intergenic 15.0%
!!! TTTGTTATAATTTGATGTAA+TGG + chr7_3:87066631-87066650 Msa1133540:intron 15.0%
!! TTGTTATAATTTGATGTAAT+GGG + chr7_3:87066632-87066651 Msa1133540:intron 15.0%
!!! TTGTTAAATTTTTATGATCA+TGG + chr7_3:87069012-87069031 Msa1133540:three_prime_UTR 15.0%
!!! TGTTAAATTTTTATGATCAT+GGG + chr7_3:87069013-87069032 Msa1133540:three_prime_UTR 15.0%
!! AGATATGTAATAATTACCTA+AGG - chr7_3:87065634-87065653 None:intergenic 20.0%
!!! GTTTTAGATCTTTGATTTTA+TGG + chr7_3:87065715-87065734 Msa1133540:intron 20.0%
!!! TTGTTTTGTTTTGAATTTTG+TGG + chr7_3:87065885-87065904 Msa1133540:intron 20.0%
!! AACAAATAAAAAGGTCTAAT+TGG - chr7_3:87066010-87066029 None:intergenic 20.0%
!!! ATTAGACCTTTTTATTTGTT+TGG + chr7_3:87066010-87066029 Msa1133540:intron 20.0%
!! GATAATCCAAACAAATAAAA+AGG - chr7_3:87066019-87066038 None:intergenic 20.0%
!!! TTACTAGTGATTTATTTTAC+TGG + chr7_3:87066076-87066095 Msa1133540:intron 20.0%
!! ATTACAAATAGAACCTTAAA+CGG - chr7_3:87066164-87066183 None:intergenic 20.0%
!!! TAGTTGATTTATGTTGTTTT+CGG + chr7_3:87066196-87066215 Msa1133540:intron 20.0%
!! TGTTAAAATGAAGACAAAAT+GGG - chr7_3:87066956-87066975 None:intergenic 20.0%
!! ATGTTAAAATGAAGACAAAA+TGG - chr7_3:87066957-87066976 None:intergenic 20.0%
!! TACACAATATTGTATTTAGA+AGG - chr7_3:87068163-87068182 None:intergenic 20.0%
!! AAATACAATATTGTGTAATG+AGG + chr7_3:87068166-87068185 Msa1133540:intron 20.0%
!! AATACAATATTGTGTAATGA+GGG + chr7_3:87068167-87068186 Msa1133540:intron 20.0%
!!! TGTCTGTTTTTATTATGAAT+AGG + chr7_3:87068212-87068231 Msa1133540:intron 20.0%
!!! TGATTAATCAATTTTTCTTG+TGG + chr7_3:87068383-87068402 Msa1133540:intron 20.0%
!! TCTATGAATGAAAATTTCAT+GGG - chr7_3:87069052-87069071 None:intergenic 20.0%
!! ATCTATGAATGAAAATTTCA+TGG - chr7_3:87069053-87069072 None:intergenic 20.0%
!! AAAAAAACTAGACACAAAAA+AGG - chr7_3:87069093-87069112 None:intergenic 20.0%
! ACAAAAGCAATGAGAAAAAA+AGG - chr7_3:87065694-87065713 None:intergenic 25.0%
!!! TTTATTTTACTGGCTTCAAA+TGG + chr7_3:87066086-87066105 Msa1133540:intron 25.0%
! TTACAAATAGAACCTTAAAC+GGG - chr7_3:87066163-87066182 None:intergenic 25.0%
!!! AGTTGATTTATGTTGTTTTC+GGG + chr7_3:87066197-87066216 Msa1133540:intron 25.0%
! GTTAAAATGAAGACAAAATG+GGG - chr7_3:87066955-87066974 None:intergenic 25.0%
!!! TGTCTTCATTTTAACATTTC+TGG + chr7_3:87066960-87066979 Msa1133540:intron 25.0%
!!! TATTTGTTATTGATGCAAGT+AGG + chr7_3:87067893-87067912 Msa1133540:intron 25.0%
! ATACAATATTGTGTAATGAG+GGG + chr7_3:87068168-87068187 Msa1133540:intron 25.0%
! TATTATGAATAGGTGTTTGA+AGG + chr7_3:87068222-87068241 Msa1133540:intron 25.0%
! AAACGGTATTCTAAATGTTA+GGG + chr7_3:87068456-87068475 Msa1133540:CDS 25.0%
! ATCACCATTACAAATGAAAA+GGG + chr7_3:87068511-87068530 Msa1133540:CDS 25.0%
! AGATGAAAAGGAAAAAATTG+AGG + chr7_3:87068705-87068724 Msa1133540:CDS 25.0%
! TAGAAATGATGAGAATTAGT+AGG + chr7_3:87068972-87068991 Msa1133540:three_prime_UTR 25.0%
! TACATATGTTAGAATGTTGA+TGG + chr7_3:87069238-87069257 Msa1133540:three_prime_UTR 25.0%
! ACATATGTTAGAATGTTGAT+GGG + chr7_3:87069239-87069258 Msa1133540:three_prime_UTR 25.0%
CTTAATTTCGAACATGTCAT+TGG - chr7_3:87065464-87065483 None:intergenic 30.0%
TCTTTGAATCACAACAAAGA+CGG + chr7_3:87065540-87065559 Msa1133540:five_prime_UTR 30.0%
ATAATTACCTAAGGAGATGA+TGG - chr7_3:87065625-87065644 None:intergenic 30.0%
ATTAGAATGTGATGCAAGTA+GGG - chr7_3:87065764-87065783 None:intergenic 30.0%
AATTAGAATGTGATGCAAGT+AGG - chr7_3:87065765-87065784 None:intergenic 30.0%
TAATTAATACAATTACGCGC+CGG + chr7_3:87065959-87065978 Msa1133540:intron 30.0%
!! CTTCTAAGATTCAAAGAAAC+CGG - chr7_3:87065981-87066000 None:intergenic 30.0%
AACGGGAAAAAACATGATTA+TGG - chr7_3:87066146-87066165 None:intergenic 30.0%
!!! ATCATGTTTTTTCCCGTTTA+AGG + chr7_3:87066148-87066167 Msa1133540:intron 30.0%
!!! TTTTCGGGTAATGCTTTTAT+GGG + chr7_3:87066212-87066231 Msa1133540:intron 30.0%
! TTTTATGGGATGTGATTACA+TGG + chr7_3:87066226-87066245 Msa1133540:intron 30.0%
TTGTCGTTATAATATTGCGA+TGG + chr7_3:87066283-87066302 Msa1133540:intron 30.0%
TTTGATGTCAAGAGACTTAT+CGG + chr7_3:87066558-87066577 Msa1133540:CDS 30.0%
TTTCTTCAGATTTGAGGATA+AGG + chr7_3:87066678-87066697 Msa1133540:intron 30.0%
AACATTCTTGTCTTTGATCT+TGG + chr7_3:87067136-87067155 Msa1133540:CDS 30.0%
AGTATCTTGACAATTGACAA+TGG + chr7_3:87067178-87067197 Msa1133540:CDS 30.0%
!! AATTGACAATGGTGTTTTTG+AGG + chr7_3:87067189-87067208 Msa1133540:CDS 30.0%
! TTTGAGGTTCTTTCTACAAA+CGG + chr7_3:87067205-87067224 Msa1133540:CDS 30.0%
TAACTCTTCAATTGTTTACC+AGG + chr7_3:87067342-87067361 Msa1133540:intron 30.0%
!!! GAAATTGAGTCACTTTTTGA+TGG + chr7_3:87067522-87067541 Msa1133540:CDS 30.0%
ATTGATGAGATTGTTCTTGT+TGG + chr7_3:87067666-87067685 Msa1133540:CDS 30.0%
TTCAAAAGTTGTTGTACCTT+TGG - chr7_3:87067708-87067727 None:intergenic 30.0%
!! AAAGGTACAACAACTTTTGA+AGG + chr7_3:87067707-87067726 Msa1133540:CDS 30.0%
!! CTTTTGAAGGATTACTTTGA+TGG + chr7_3:87067720-87067739 Msa1133540:CDS 30.0%
ATAGACTATAATGGTACCTT+TGG - chr7_3:87067841-87067860 None:intergenic 30.0%
TGATATCACAAAACAAACCT+TGG - chr7_3:87068315-87068334 None:intergenic 30.0%
CTTCTATGAACTTTCTCTAT+TGG + chr7_3:87068341-87068360 Msa1133540:intron 30.0%
CAAACGGTATTCTAAATGTT+AGG + chr7_3:87068455-87068474 Msa1133540:CDS 30.0%
GATCACCATTACAAATGAAA+AGG + chr7_3:87068510-87068529 Msa1133540:CDS 30.0%
! GTTTTTCATGTTGTAGACAT+AGG - chr7_3:87068644-87068663 None:intergenic 30.0%
TATTTGTGTTTGCTCACATT+TGG + chr7_3:87068928-87068947 Msa1133540:three_prime_UTR 30.0%
GTATCTTTCTTCTAATCCTA+CGG - chr7_3:87069221-87069240 None:intergenic 30.0%
!! TTAGGACAGTTTTAGCCAAT+GGG - chr7_3:87065413-87065432 None:intergenic 35.0%
!!! GTTTTCGGGTAATGCTTTTA+TGG + chr7_3:87066211-87066230 Msa1133540:intron 35.0%
ATATTGCGATGGTTTATTGC+AGG + chr7_3:87066294-87066313 Msa1133540:intron 35.0%
ACTGTTATTGGGATAGATCT+TGG + chr7_3:87066369-87066388 Msa1133540:CDS 35.0%
GGAACAACATATTCATGTGT+TGG + chr7_3:87066390-87066409 Msa1133540:CDS 35.0%
! TGTGTTGGTGTTTACAAGAA+CGG + chr7_3:87066405-87066424 Msa1133540:CDS 35.0%
AAATCGTATCACACCATCAT+GGG + chr7_3:87066458-87066477 Msa1133540:CDS 35.0%
AAGTCTCTTGACATCAAAGA+TGG - chr7_3:87066556-87066575 None:intergenic 35.0%
TGCTTCTTTCTTCAGATTTG+AGG + chr7_3:87066672-87066691 Msa1133540:intron 35.0%
TCCTTACAAGATTGTCAACA+AGG + chr7_3:87066726-87066745 Msa1133540:CDS 35.0%
TCCTTGTTGACAATCTTGTA+AGG - chr7_3:87066730-87066749 None:intergenic 35.0%
TACAAGATTGTCAACAAGGA+TGG + chr7_3:87066730-87066749 Msa1133540:CDS 35.0%
TTTACTCTGACCTGAATGTA+TGG - chr7_3:87066760-87066779 None:intergenic 35.0%
ATACATTCAGGTCAGAGTAA+AGG + chr7_3:87066759-87066778 Msa1133540:CDS 35.0%
CTTCATCTTAGTCAGAATCA+TGG - chr7_3:87066824-87066843 None:intergenic 35.0%
CATGATTCTGACTAAGATGA+AGG + chr7_3:87066822-87066841 Msa1133540:CDS 35.0%
TGTAATTCACCAATTCACCT+GGG - chr7_3:87066900-87066919 None:intergenic 35.0%
TTGTAATTCACCAATTCACC+TGG - chr7_3:87066901-87066920 None:intergenic 35.0%
! AACTTGTTCCTCATGCAATT+TGG + chr7_3:87066919-87066938 Msa1133540:intron 35.0%
GAAAGTAACCAAATTGCATG+AGG - chr7_3:87066930-87066949 None:intergenic 35.0%
ATTCTTGTCTTTGATCTTGG+AGG + chr7_3:87067139-87067158 Msa1133540:CDS 35.0%
ACAATTGAAGAGTTAGCACT+TGG - chr7_3:87067337-87067356 None:intergenic 35.0%
GGACTTTGATCAGAGAATAA+TGG + chr7_3:87067368-87067387 Msa1133540:CDS 35.0%
! GATCAAGAAAAAGCATAGCA+AGG + chr7_3:87067407-87067426 Msa1133540:CDS 35.0%
AAAGTGACTCAATTTCCACA+CGG - chr7_3:87067518-87067537 None:intergenic 35.0%
!! AGTTGAACAATGACTTGTTC+CGG + chr7_3:87067586-87067605 Msa1133540:CDS 35.0%
GAAGGATTACTTTGATGGAA+AGG + chr7_3:87067725-87067744 Msa1133540:CDS 35.0%
GGCTAGAGTATAGACTATAA+TGG - chr7_3:87067850-87067869 None:intergenic 35.0%
! TCTAGCCTTTCAATTGCATT+AGG + chr7_3:87067863-87067882 Msa1133540:intron 35.0%
AGCTACCTAATGCAATTGAA+AGG - chr7_3:87067871-87067890 None:intergenic 35.0%
! CAATGAGAGAGTGTAATACT+AGG - chr7_3:87067922-87067941 None:intergenic 35.0%
TCCAACAGTTTCAATTCCAA+GGG - chr7_3:87067997-87068016 None:intergenic 35.0%
!! GCAAACAACTGTTTCTATTC+AGG + chr7_3:87068097-87068116 Msa1133540:CDS 35.0%
AGCAATATGCAGTGGAATAA+TGG - chr7_3:87068130-87068149 None:intergenic 35.0%
TTATTCCACTGCATATTGCT+AGG + chr7_3:87068130-87068149 Msa1133540:intron 35.0%
AATAAAAACAGACAACACCC+CGG - chr7_3:87068206-87068225 None:intergenic 35.0%
TTCTTGTGGTAATTGAACAG+AGG + chr7_3:87068397-87068416 Msa1133540:intron 35.0%
AAAGGTCACTTCAATTTGAG+GGG - chr7_3:87068425-87068444 None:intergenic 35.0%
CAAAGGTCACTTCAATTTGA+GGG - chr7_3:87068426-87068445 None:intergenic 35.0%
TCAAAGGTCACTTCAATTTG+AGG - chr7_3:87068427-87068446 None:intergenic 35.0%
!! ACCTTTGAAGTAGATGCAAA+CGG + chr7_3:87068439-87068458 Msa1133540:CDS 35.0%
TGAAGGAAAGAATTGATGCT+CGG + chr7_3:87068605-87068624 Msa1133540:CDS 35.0%
GAAAAACCAAATCAGTGACA+AGG + chr7_3:87068657-87068676 Msa1133540:CDS 35.0%
! CAAGTTGGAATCAGATGAAA+AGG + chr7_3:87068693-87068712 Msa1133540:CDS 35.0%
ACTCTTCTTTCTCAACAGTT+TGG - chr7_3:87068768-87068787 None:intergenic 35.0%
! AGTGATAATTGGGTTGCAAA+CGG - chr7_3:87068818-87068837 None:intergenic 35.0%
GGTAAACAGCAGTGATAATT+GGG - chr7_3:87068828-87068847 None:intergenic 35.0%
TGGTAAACAGCAGTGATAAT+TGG - chr7_3:87068829-87068848 None:intergenic 35.0%
!! TTCTAGCTCTACTTTAGAAG+CGG - chr7_3:87068957-87068976 None:intergenic 35.0%
ATGAGAATTAGTAGGTCAAG+CGG + chr7_3:87068980-87068999 Msa1133540:three_prime_UTR 35.0%
TTACAGCTTTCTGTACTGTT+TGG + chr7_3:87069131-87069150 Msa1133540:three_prime_UTR 35.0%
!! GTTAGGACAGTTTTAGCCAA+TGG - chr7_3:87065414-87065433 None:intergenic 40.0%
! GTCCTAACTCGATTTGCAAT+TGG + chr7_3:87065426-87065445 Msa1133540:five_prime_UTR 40.0%
GACCAATTGCAAATCGAGTT+AGG - chr7_3:87065431-87065450 None:intergenic 40.0%
! ACATGTCATTGGTGATTACG+TGG - chr7_3:87065453-87065472 None:intergenic 40.0%
! TAAAAAGCGCAGAGTAACAC+TGG + chr7_3:87065495-87065514 Msa1133540:five_prime_UTR 40.0%
TGATACATCTCACAACACCA+TGG + chr7_3:87065563-87065582 Msa1133540:exon 40.0%
TGGGATGTGATTACATGGTT+TGG + chr7_3:87066231-87066250 Msa1133540:intron 40.0%
AATAACAGTCCCTAACTTGG+TGG - chr7_3:87066358-87066377 None:intergenic 40.0%
ACCAAGTTAGGGACTGTTAT+TGG + chr7_3:87066357-87066376 Msa1133540:CDS 40.0%
CCAAGTTAGGGACTGTTATT+GGG + chr7_3:87066358-87066377 Msa1133540:CDS 40.0%
ATGGTGTGATACGATTTCCT+TGG - chr7_3:87066455-87066474 None:intergenic 40.0%
GAAATCGTATCACACCATCA+TGG + chr7_3:87066457-87066476 Msa1133540:CDS 40.0%
CATCAAAGATGGTCCTTTCA+GGG - chr7_3:87066545-87066564 None:intergenic 40.0%
ACATCAAAGATGGTCCTTTC+AGG - chr7_3:87066546-87066565 None:intergenic 40.0%
GGATGGAAAACCATACATTC+AGG + chr7_3:87066747-87066766 Msa1133540:CDS 40.0%
ATTCAGGTCAGAGTAAAGGA+TGG + chr7_3:87066763-87066782 Msa1133540:CDS 40.0%
CTTACTTCAATGATGCTCAG+AGG + chr7_3:87067002-87067021 Msa1133540:CDS 40.0%
CTTGTCCAATCCATAAGCAA+TGG - chr7_3:87067101-87067120 None:intergenic 40.0%
!! GCTTATGGATTGGACAAGAA+AGG + chr7_3:87067103-87067122 Msa1133540:CDS 40.0%
!! TATGGATTGGACAAGAAAGG+TGG + chr7_3:87067106-87067125 Msa1133540:CDS 40.0%
TAAGTACTCACCTCCAAGAT+GGG - chr7_3:87067236-87067255 None:intergenic 40.0%
ATAAGTACTCACCTCCAAGA+TGG - chr7_3:87067237-87067256 None:intergenic 40.0%
CTTCAATTGTTTACCAGGTG+AGG + chr7_3:87067347-87067366 Msa1133540:intron 40.0%
GCATAGCAAGGATATTAGCA+AGG + chr7_3:87067419-87067438 Msa1133540:CDS 40.0%
TCAACTCTTCAAATCGAGCA+CGG - chr7_3:87067572-87067591 None:intergenic 40.0%
GATGAGATTGTTCTTGTTGG+TGG + chr7_3:87067669-87067688 Msa1133540:CDS 40.0%
TGATGGAAAGGAACCAAACA+AGG + chr7_3:87067737-87067756 Msa1133540:CDS 40.0%
GATGGAAAGGAACCAAACAA+GGG + chr7_3:87067738-87067757 Msa1133540:CDS 40.0%
ATGGAAAGGAACCAAACAAG+GGG + chr7_3:87067739-87067758 Msa1133540:CDS 40.0%
!!! TGCAAGGAAGCATTTTGAGT+GGG + chr7_3:87067799-87067818 Msa1133540:CDS 40.0%
GTATCCAGATATCCTTCTCT+TGG + chr7_3:87067956-87067975 Msa1133540:intron 40.0%
ACATCCAAGAGAAGGATATC+TGG - chr7_3:87067963-87067982 None:intergenic 40.0%
GTTTCAATTCCAAGGGTAAG+AGG - chr7_3:87067990-87068009 None:intergenic 40.0%
ACCCTTGGAATTGAAACTGT+TGG + chr7_3:87067993-87068012 Msa1133540:CDS 40.0%
CTCCAACAGTTTCAATTCCA+AGG - chr7_3:87067998-87068017 None:intergenic 40.0%
CTTGGAATTGAAACTGTTGG+AGG + chr7_3:87067996-87068015 Msa1133540:CDS 40.0%
!!! AACACCTGGGATTTTTTGGT+GGG - chr7_3:87068059-87068078 None:intergenic 40.0%
!!! AAACACCTGGGATTTTTTGG+TGG - chr7_3:87068060-87068079 None:intergenic 40.0%
!!! GGTAAACACCTGGGATTTTT+TGG - chr7_3:87068063-87068082 None:intergenic 40.0%
! AAACAGTTGTTTGCTGATCC+TGG - chr7_3:87068091-87068110 None:intergenic 40.0%
AATGTCCTAGCAATATGCAG+TGG - chr7_3:87068138-87068157 None:intergenic 40.0%
AATAGGTGTTTGAAGGTGAG+AGG + chr7_3:87068229-87068248 Msa1133540:intron 40.0%
AATCAAAGTTCCCGAGAAGA+CGG - chr7_3:87068272-87068291 None:intergenic 40.0%
ACCGTTTGCATCTACTTCAA+AGG - chr7_3:87068443-87068462 None:intergenic 40.0%
AAATGTTAGGGCAGAAGACA+AGG + chr7_3:87068468-87068487 Msa1133540:CDS 40.0%
AATGTTAGGGCAGAAGACAA+GGG + chr7_3:87068469-87068488 Msa1133540:CDS 40.0%
! GCGTCCCTTTTCATTTGTAA+TGG - chr7_3:87068518-87068537 None:intergenic 40.0%
CTTCACTTTCTTGTCTTCCT+CGG - chr7_3:87068590-87068609 None:intergenic 40.0%
! GTTTGTCCTTGTCACTGATT+TGG - chr7_3:87068666-87068685 None:intergenic 40.0%
CCATTCAAGTGCTTCTTTCA+CGG - chr7_3:87068734-87068753 None:intergenic 40.0%
! TTATCACTGCTGTTTACCAG+AGG + chr7_3:87068830-87068849 Msa1133540:CDS 40.0%
!! TCTAGCTCTACTTTAGAAGC+GGG - chr7_3:87068956-87068975 None:intergenic 40.0%
!!! TGCTTGTTTTGTGACTTTCC+CGG + chr7_3:87069179-87069198 Msa1133540:three_prime_UTR 40.0%
GCAGTAGAGCGACTTACAAA+GGG + chr7_3:87065356-87065375 Msa1133540:five_prime_UTR 45.0%
GACATGTTCCTACACACAAG+AGG + chr7_3:87065383-87065402 Msa1133540:five_prime_UTR 45.0%
CTTCTCACCATCATCTCCTT+AGG + chr7_3:87065615-87065634 Msa1133540:CDS 45.0%
TGCAACATCTGCTGCAAAAG+AGG + chr7_3:87066326-87066345 Msa1133540:CDS 45.0%
ACATCTGCTGCAAAAGAGGA+AGG + chr7_3:87066330-87066349 Msa1133540:CDS 45.0%
CATCTGCTGCAAAAGAGGAA+GGG + chr7_3:87066331-87066350 Msa1133540:CDS 45.0%
CCCAATAACAGTCCCTAACT+TGG - chr7_3:87066361-87066380 None:intergenic 45.0%
GAAATCATAGCCAACGACCA+AGG + chr7_3:87066435-87066454 Msa1133540:CDS 45.0%
GATACGATTTCCTTGGTCGT+TGG - chr7_3:87066448-87066467 None:intergenic 45.0%
TCGGTGAAAGAAACCCATGA+TGG - chr7_3:87066474-87066493 None:intergenic 45.0%
ACCGACGATGAGAGATTGAT+TGG + chr7_3:87066489-87066508 Msa1133540:CDS 45.0%
CCCAATCAATCTCTCATCGT+CGG - chr7_3:87066493-87066512 None:intergenic 45.0%
CCGACGATGAGAGATTGATT+GGG + chr7_3:87066490-87066509 Msa1133540:CDS 45.0%
CGACGATGAGAGATTGATTG+GGG + chr7_3:87066491-87066510 Msa1133540:CDS 45.0%
AGTAAAGGATGGTGAGACCA+AGG + chr7_3:87066774-87066793 Msa1133540:CDS 45.0%
! CATCACGAATAGTCTTGCCA+AGG - chr7_3:87066864-87066883 None:intergenic 45.0%
GTTCAAACCAGCAATGACAC+CGG - chr7_3:87067044-87067063 None:intergenic 45.0%
!! TGTCATTGCTGGTTTGAACG+TGG + chr7_3:87067045-87067064 Msa1133540:CDS 45.0%
TGCTGCCATTGCTTATGGAT+TGG + chr7_3:87067093-87067112 Msa1133540:CDS 45.0%
CTTGTCTTTGATCTTGGAGG+TGG + chr7_3:87067142-87067161 Msa1133540:CDS 45.0%
ACAAACGGAGATACCCATCT+TGG + chr7_3:87067220-87067239 Msa1133540:CDS 45.0%
ACTCAATTTCCACACGGACT+TGG - chr7_3:87067512-87067531 None:intergenic 45.0%
CAACTCTTCAAATCGAGCAC+GGG - chr7_3:87067571-87067590 None:intergenic 45.0%
!! TGACTTGTTCCGGAAGACAA+TGG + chr7_3:87067596-87067615 Msa1133540:CDS 45.0%
! GACTTGTTCCGGAAGACAAT+GGG + chr7_3:87067597-87067616 Msa1133540:CDS 45.0%
! TTCTTGTTGGTGGAAGCACA+AGG + chr7_3:87067679-87067698 Msa1133540:CDS 45.0%
! TGGAAGCACAAGGATTCCAA+AGG + chr7_3:87067689-87067708 Msa1133540:CDS 45.0%
TGGAAAGGAACCAAACAAGG+GGG + chr7_3:87067740-87067759 Msa1133540:CDS 45.0%
CAAAGGCAACTGCTTCATCA+GGG - chr7_3:87067770-87067789 None:intergenic 45.0%
!!! GTGCAAGGAAGCATTTTGAG+TGG + chr7_3:87067798-87067817 Msa1133540:CDS 45.0%
!!! GCAAGGAAGCATTTTGAGTG+GGG + chr7_3:87067800-87067819 Msa1133540:CDS 45.0%
!!! ACACCTGGGATTTTTTGGTG+GGG - chr7_3:87068058-87068077 None:intergenic 45.0%
! AGTTGTTTGCTGATCCTGGT+AGG - chr7_3:87068087-87068106 None:intergenic 45.0%
ACAAAGGATTGCCGTCTTCT+CGG + chr7_3:87068258-87068277 Msa1133540:CDS 45.0%
!! CTCGGGAACTTTGATTTGTC+TGG + chr7_3:87068276-87068295 Msa1133540:CDS 45.0%
AAACAAACCTTGGAGCTGGT+GGG - chr7_3:87068305-87068324 None:intergenic 45.0%
AAAACAAACCTTGGAGCTGG+TGG - chr7_3:87068306-87068325 None:intergenic 45.0%
CACAAAACAAACCTTGGAGC+TGG - chr7_3:87068309-87068328 None:intergenic 45.0%
CGAGGAAGACAAGAAAGTGA+AGG + chr7_3:87068588-87068607 Msa1133540:CDS 45.0%
!! GGACAAACTTGCTGACAAGT+TGG + chr7_3:87068678-87068697 Msa1133540:CDS 45.0%
!! CCGTGAAAGAAGCACTTGAA+TGG + chr7_3:87068731-87068750 Msa1133540:CDS 45.0%
!! GAAAGAAGCACTTGAATGGC+TGG + chr7_3:87068735-87068754 Msa1133540:CDS 45.0%
!!! GCTTGTTTTGTGACTTTCCC+GGG + chr7_3:87069180-87069199 Msa1133540:three_prime_UTR 45.0%
CGCAGTAGAGCGACTTACAA+AGG + chr7_3:87065355-87065374 Msa1133540:five_prime_UTR 50.0%
TGGGATTGCCTCTTGTGTGT+AGG - chr7_3:87065394-87065413 None:intergenic 50.0%
CACACAAGAGGCAATCCCAT+TGG + chr7_3:87065395-87065414 Msa1133540:five_prime_UTR 50.0%
ATGGCTCGCTCTTCTTCTTG+CGG + chr7_3:87065582-87065601 Msa1133540:CDS 50.0%
AGGAAGGGACCACCAAGTTA+GGG + chr7_3:87066346-87066365 Msa1133540:CDS 50.0%
CGATGAGAGATTGATTGGGG+AGG + chr7_3:87066494-87066513 Msa1133540:CDS 50.0%
!! TCATGGCACTGACTTCCTCA+GGG - chr7_3:87066807-87066826 None:intergenic 50.0%
!! ATCATGGCACTGACTTCCTC+AGG - chr7_3:87066808-87066827 None:intergenic 50.0%
! GAAACCGCTGAAGCATTCCT+TGG + chr7_3:87066844-87066863 Msa1133540:CDS 50.0%
CTTGCCAAGGAATGCTTCAG+CGG - chr7_3:87066851-87066870 None:intergenic 50.0%
CAAGACTATTCGTGATGCCG+TGG + chr7_3:87066867-87066886 Msa1133540:CDS 50.0%
CTTCAATGATGCTCAGAGGC+AGG + chr7_3:87067006-87067025 Msa1133540:CDS 50.0%
TCCATAAGCAATGGCAGCAG+CGG - chr7_3:87067092-87067111 None:intergenic 50.0%
AACGGAGATACCCATCTTGG+AGG + chr7_3:87067223-87067242 Msa1133540:CDS 50.0%
CTCTGATCAAAGTCCTCACC+TGG - chr7_3:87067363-87067382 None:intergenic 50.0%
! AGCAAGGACAACAGAGCACT+TGG + chr7_3:87067435-87067454 Msa1133540:CDS 50.0%
! ACAGAGCACTTGGAAAGCTG+AGG + chr7_3:87067445-87067464 Msa1133540:CDS 50.0%
AGCACTTGGAAAGCTGAGGA+GGG + chr7_3:87067449-87067468 Msa1133540:CDS 50.0%
CTGGCTACTAAGAGCTCTCT+TGG - chr7_3:87067487-87067506 None:intergenic 50.0%
TCAAATCGAGCACGGGTAAG+TGG - chr7_3:87067564-87067583 None:intergenic 50.0%
TCACAGGTCCCATTGTCTTC+CGG - chr7_3:87067608-87067627 None:intergenic 50.0%
GACAATGGGACCTGTGAAGA+AGG + chr7_3:87067611-87067630 Msa1133540:CDS 50.0%
TCGTCCATTGCCTTCTTCAC+AGG - chr7_3:87067624-87067643 None:intergenic 50.0%
AAGAAGGCAATGGACGATGC+TGG + chr7_3:87067627-87067646 Msa1133540:CDS 50.0%
CCAAAGGCAACTGCTTCATC+AGG - chr7_3:87067771-87067790 None:intergenic 50.0%
CCTGATGAAGCAGTTGCCTT+TGG + chr7_3:87067768-87067787 Msa1133540:CDS 50.0%
!!! AGGAAGCATTTTGAGTGGGG+AGG + chr7_3:87067803-87067822 Msa1133540:CDS 50.0%
!!! GGAAGCATTTTGAGTGGGGA+GGG + chr7_3:87067804-87067823 Msa1133540:CDS 50.0%
GAGGGTGGTGAAGAAACCAA+AGG + chr7_3:87067822-87067841 Msa1133540:CDS 50.0%
GAGGTGCAACATCCAAGAGA+AGG - chr7_3:87067971-87067990 None:intergenic 50.0%
GATGTTGCACCTCTTACCCT+TGG + chr7_3:87067978-87067997 Msa1133540:CDS 50.0%
GTGGGGATGACAGTGTTTCT+AGG - chr7_3:87068041-87068060 None:intergenic 50.0%
CATCCCCACCAAAAAATCCC+AGG + chr7_3:87068052-87068071 Msa1133540:CDS 50.0%
CTGGTAGGTGGTAAACACCT+GGG - chr7_3:87068072-87068091 None:intergenic 50.0%
! TGTTTGCTGATCCTGGTAGG+TGG - chr7_3:87068084-87068103 None:intergenic 50.0%
!! TGAGGGGTGTTGTACTCAAC+CGG + chr7_3:87068184-87068203 Msa1133540:intron 50.0%
AGGTGAGAGGAGTCTCACAA+AGG + chr7_3:87068242-87068261 Msa1133540:CDS 50.0%
CAAAGGATTGCCGTCTTCTC+GGG + chr7_3:87068259-87068278 Msa1133540:CDS 50.0%
TGAGCCAGGAGGAAATTGAC+CGG + chr7_3:87068539-87068558 Msa1133540:CDS 50.0%
! ACTGCTGTTTACCAGAGGTC+AGG + chr7_3:87068835-87068854 Msa1133540:CDS 50.0%
GCGTTTATGCAGAGAACCGT+AGG + chr7_3:87069202-87069221 Msa1133540:three_prime_UTR 50.0%
GCAAGAAGAAGAGCGAGCCA+TGG - chr7_3:87065583-87065602 None:intergenic 55.0%
TGGCTCGCTCTTCTTCTTGC+GGG + chr7_3:87065583-87065602 Msa1133540:CDS 55.0%
GAGGAAGGGACCACCAAGTT+AGG + chr7_3:87066345-87066364 Msa1133540:CDS 55.0%
TGGCAGCTGTCAACCCTGAA+AGG + chr7_3:87066529-87066548 Msa1133540:CDS 55.0%
TTCCTCAGGGCTGAACACCT+TGG - chr7_3:87066794-87066813 None:intergenic 55.0%
TTCACCTGGGACAGTGACCA+CGG - chr7_3:87066887-87066906 None:intergenic 55.0%
GGTCACTGTCCCAGGTGAAT+TGG + chr7_3:87066888-87066907 Msa1133540:intron 55.0%
AATGACACCGGCATCCTTGG+TGG - chr7_3:87067032-87067051 None:intergenic 55.0%
AGCAATGACACCGGCATCCT+TGG - chr7_3:87067035-87067054 None:intergenic 55.0%
!! AAGGATGCCGGTGTCATTGC+TGG + chr7_3:87067034-87067053 Msa1133540:CDS 55.0%
TAAGCAATGGCAGCAGCGGT+GGG - chr7_3:87067088-87067107 None:intergenic 55.0%
ATAAGCAATGGCAGCAGCGG+TGG - chr7_3:87067089-87067108 None:intergenic 55.0%
ACCGCTGCTGCCATTGCTTA+TGG + chr7_3:87067088-87067107 Msa1133540:CDS 55.0%
GAGCACTTGGAAAGCTGAGG+AGG + chr7_3:87067448-87067467 Msa1133540:CDS 55.0%
!! TTTCCACACGGACTTGGTGC+TGG - chr7_3:87067506-87067525 None:intergenic 55.0%
GGGACCTGTGAAGAAGGCAA+TGG + chr7_3:87067617-87067636 Msa1133540:CDS 55.0%
TCAGGGTTGACCCCCTTGTT+TGG - chr7_3:87067753-87067772 None:intergenic 55.0%
TCCTTGCACTGCAGCACCAA+AGG - chr7_3:87067787-87067806 None:intergenic 55.0%
!! AGCATTTTGAGTGGGGAGGG+TGG + chr7_3:87067807-87067826 Msa1133540:CDS 55.0%
CCTGGTAGGTGGTAAACACC+TGG - chr7_3:87068073-87068092 None:intergenic 55.0%
CCAGGTGTTTACCACCTACC+AGG + chr7_3:87068070-87068089 Msa1133540:CDS 55.0%
!! GAGGGGTGTTGTACTCAACC+GGG + chr7_3:87068185-87068204 Msa1133540:intron 55.0%
!! AGGGGTGTTGTACTCAACCG+GGG + chr7_3:87068186-87068205 Msa1133540:intron 55.0%
GGTCAATTTCCTCCTGGCTC+AGG - chr7_3:87068540-87068559 None:intergenic 55.0%
CCATCCGGTCAATTTCCTCC+TGG - chr7_3:87068546-87068565 None:intergenic 55.0%
CCAGGAGGAAATTGACCGGA+TGG + chr7_3:87068543-87068562 Msa1133540:CDS 55.0%
GTCTTCCTCGGCAAACTCCT+CGG - chr7_3:87068578-87068597 None:intergenic 55.0%
GCTGTTTACCAGAGGTCAGG+TGG + chr7_3:87068838-87068857 Msa1133540:CDS 55.0%
GGTTCTCTGCATAAACGCCC+GGG - chr7_3:87069200-87069219 None:intergenic 55.0%
CGGTTCTCTGCATAAACGCC+CGG - chr7_3:87069201-87069220 None:intergenic 55.0%
TGGGGAGGCTGCGAAGAATC+TGG + chr7_3:87066509-87066528 Msa1133540:CDS 60.0%
! GACCAAGGTGTTCAGCCCTG+AGG + chr7_3:87066789-87066808 Msa1133540:CDS 60.0%
TAGCCAGCACCAAGTCCGTG+TGG + chr7_3:87067500-87067519 Msa1133540:CDS 60.0%
!! GCCTTTGGTGCTGCAGTGCA+AGG + chr7_3:87067783-87067802 Msa1133540:CDS 60.0%
CTGGAATCCCACCAGCTCCA+AGG + chr7_3:87068295-87068314 Msa1133540:CDS 60.0%
! AGGGCAGAAGACAAGGGCAC+AGG + chr7_3:87068475-87068494 Msa1133540:CDS 60.0%
TGAAAAGGGACGCCTGAGCC+AGG + chr7_3:87068525-87068544 Msa1133540:CDS 60.0%
CCTCGGCTTCACGAACCATC+CGG - chr7_3:87068561-87068580 None:intergenic 60.0%
TGAAGCCGAGGAGTTTGCCG+AGG + chr7_3:87068570-87068589 Msa1133540:CDS 60.0%
GAGCTCCAGGTGGTGCATCA+GGG + chr7_3:87068860-87068879 Msa1133540:CDS 60.0%
AGCTCCAGGTGGTGCATCAG+GGG + chr7_3:87068861-87068880 Msa1133540:CDS 60.0%
TGGTGCATCAGGGGAAGGAG+AGG + chr7_3:87068870-87068889 Msa1133540:CDS 60.0%
GATGCCGTGGTCACTGTCCC+AGG + chr7_3:87066880-87066899 Msa1133540:CDS 65.0%
TGCTCAGAGGCAGGCCACCA+AGG + chr7_3:87067015-87067034 Msa1133540:CDS 65.0%
AGGCAGGCCACCAAGGATGC+CGG + chr7_3:87067022-87067041 Msa1133540:CDS 65.0%
AAAGGGACGCCTGAGCCAGG+AGG + chr7_3:87068528-87068547 Msa1133540:CDS 65.0%
CCGGATGGTTCGTGAAGCCG+AGG + chr7_3:87068558-87068577 Msa1133540:CDS 65.0%
CTGGAGCTCCACCTGACCTC+TGG - chr7_3:87068849-87068868 None:intergenic 65.0%
CAGAGGTCAGGTGGAGCTCC+AGG + chr7_3:87068847-87068866 Msa1133540:CDS 65.0%
AGGTCAGGTGGAGCTCCAGG+TGG + chr7_3:87068850-87068869 Msa1133540:CDS 65.0%
GGAGCTCCAGGTGGTGCATC+AGG + chr7_3:87068859-87068878 Msa1133540:CDS 65.0%
CCTTCCCCTGATGCACCACC+TGG - chr7_3:87068868-87068887 None:intergenic 65.0%
CCAGGTGGTGCATCAGGGGA+AGG + chr7_3:87068865-87068884 Msa1133540:CDS 65.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 87065342 87069317 87065342 ID=Msa1133540;Name=Msa1133540
chr7_3 mRNA 87065342 87069317 87065342 ID=Msa1133540-mRNA-1;Parent=Msa1133540;Name=Msa1133540-mRNA-1;_AED=0.04;_eAED=0.04;_QI=240|1|1|1|1|1|8|393|669
chr7_3 exon 87065342 87065636 87065342 ID=Msa1133540-mRNA-1:exon:26142;Parent=Msa1133540-mRNA-1
chr7_3 exon 87066316 87066586 87066316 ID=Msa1133540-mRNA-1:exon:26143;Parent=Msa1133540-mRNA-1
chr7_3 exon 87066687 87066901 87066687 ID=Msa1133540-mRNA-1:exon:26144;Parent=Msa1133540-mRNA-1
chr7_3 exon 87067002 87067244 87067002 ID=Msa1133540-mRNA-1:exon:26145;Parent=Msa1133540-mRNA-1
chr7_3 exon 87067364 87067843 87067364 ID=Msa1133540-mRNA-1:exon:26146;Parent=Msa1133540-mRNA-1
chr7_3 exon 87067964 87068118 87067964 ID=Msa1133540-mRNA-1:exon:26147;Parent=Msa1133540-mRNA-1
chr7_3 exon 87068234 87068316 87068234 ID=Msa1133540-mRNA-1:exon:26148;Parent=Msa1133540-mRNA-1
chr7_3 exon 87068417 87069317 87068417 ID=Msa1133540-mRNA-1:exon:26149;Parent=Msa1133540-mRNA-1
chr7_3 five_prime_UTR 87065342 87065581 87065342 ID=Msa1133540-mRNA-1:five_prime_utr;Parent=Msa1133540-mRNA-1
chr7_3 CDS 87065582 87065636 87065582 ID=Msa1133540-mRNA-1:cds;Parent=Msa1133540-mRNA-1
chr7_3 CDS 87066316 87066586 87066316 ID=Msa1133540-mRNA-1:cds;Parent=Msa1133540-mRNA-1
chr7_3 CDS 87066687 87066901 87066687 ID=Msa1133540-mRNA-1:cds;Parent=Msa1133540-mRNA-1
chr7_3 CDS 87067002 87067244 87067002 ID=Msa1133540-mRNA-1:cds;Parent=Msa1133540-mRNA-1
chr7_3 CDS 87067364 87067843 87067364 ID=Msa1133540-mRNA-1:cds;Parent=Msa1133540-mRNA-1
chr7_3 CDS 87067964 87068118 87067964 ID=Msa1133540-mRNA-1:cds;Parent=Msa1133540-mRNA-1
chr7_3 CDS 87068234 87068316 87068234 ID=Msa1133540-mRNA-1:cds;Parent=Msa1133540-mRNA-1
chr7_3 CDS 87068417 87068924 87068417 ID=Msa1133540-mRNA-1:cds;Parent=Msa1133540-mRNA-1
chr7_3 three_prime_UTR 87068925 87069317 87068925 ID=Msa1133540-mRNA-1:three_prime_utr;Parent=Msa1133540-mRNA-1
Gene Sequence

>Msa1133540

ATGGCTCGCTCTTCTTCTTGCGGGTCTCTGTTTCTTCTCACCATCATCTCCTTAGGATGTCTATTTGCAACATCTGCTGCAAAAGAGGAAGGGACCACCAAGTTAGGGACTGTTATTGGGATAGATCTTGGAACAACATATTCATGTGTTGGTGTTTACAAGAACGGACATGTTGAAATCATAGCCAACGACCAAGGAAATCGTATCACACCATCATGGGTTTCTTTCACCGACGATGAGAGATTGATTGGGGAGGCTGCGAAGAATCTGGCAGCTGTCAACCCTGAAAGGACCATCTTTGATGTCAAGAGACTTATCGGAAGAAAATTTGAGGATAAGGAAGTTCAAAGAGACATGAAGCTTGTTCCTTACAAGATTGTCAACAAGGATGGAAAACCATACATTCAGGTCAGAGTAAAGGATGGTGAGACCAAGGTGTTCAGCCCTGAGGAAGTCAGTGCCATGATTCTGACTAAGATGAAGGAAACCGCTGAAGCATTCCTTGGCAAGACTATTCGTGATGCCGTGGTCACTGTCCCAGCTTACTTCAATGATGCTCAGAGGCAGGCCACCAAGGATGCCGGTGTCATTGCTGGTTTGAACGTGGCTAGAATCATTAATGAACCCACCGCTGCTGCCATTGCTTATGGATTGGACAAGAAAGGTGGAGAGAAGAACATTCTTGTCTTTGATCTTGGAGGTGGAACTTTTGATGTCAGTATCTTGACAATTGACAATGGTGTTTTTGAGGTTCTTTCTACAAACGGAGATACCCATCTTGGAGGTGAGGACTTTGATCAGAGAATAATGGAGTACTTCATTAAATTGATCAAGAAAAAGCATAGCAAGGATATTAGCAAGGACAACAGAGCACTTGGAAAGCTGAGGAGGGAGAGTGAGCGTGCCAAGAGAGCTCTTAGTAGCCAGCACCAAGTCCGTGTGGAAATTGAGTCACTTTTTGATGGCGTTGATTTCTCTGAGCCACTTACCCGTGCTCGATTTGAAGAGTTGAACAATGACTTGTTCCGGAAGACAATGGGACCTGTGAAGAAGGCAATGGACGATGCTGGATTACAGAAGAATCAAATTGATGAGATTGTTCTTGTTGGTGGAAGCACAAGGATTCCAAAGGTACAACAACTTTTGAAGGATTACTTTGATGGAAAGGAACCAAACAAGGGGGTCAACCCTGATGAAGCAGTTGCCTTTGGTGCTGCAGTGCAAGGAAGCATTTTGAGTGGGGAGGGTGGTGAAGAAACCAAAGATATCCTTCTCTTGGATGTTGCACCTCTTACCCTTGGAATTGAAACTGTTGGAGGAGTGATGACAAAGTTGATTCCTAGAAACACTGTCATCCCCACCAAAAAATCCCAGGTGTTTACCACCTACCAGGATCAGCAAACAACTGTTTCTATTCAGGTGTTTGAAGGTGAGAGGAGTCTCACAAAGGATTGCCGTCTTCTCGGGAACTTTGATTTGTCTGGAATCCCACCAGCTCCAAGAGGTACCCCTCAAATTGAAGTGACCTTTGAAGTAGATGCAAACGGTATTCTAAATGTTAGGGCAGAAGACAAGGGCACAGGTAAATCAGAAAAGATCACCATTACAAATGAAAAGGGACGCCTGAGCCAGGAGGAAATTGACCGGATGGTTCGTGAAGCCGAGGAGTTTGCCGAGGAAGACAAGAAAGTGAAGGAAAGAATTGATGCTCGGAATGCTCTTGAAACCTATGTCTACAACATGAAAAACCAAATCAGTGACAAGGACAAACTTGCTGACAAGTTGGAATCAGATGAAAAGGAAAAAATTGAGGCTGCCGTGAAAGAAGCACTTGAATGGCTGGATGACAACCAAACTGTTGAGAAAGAAGAGTTTGAAGAGAAGCTTAAAGAAGTTGAAGCCGTTTGCAACCCAATTATCACTGCTGTTTACCAGAGGTCAGGTGGAGCTCCAGGTGGTGCATCAGGGGAAGGAGAGGATGAAGATGAAGACTCTCGCGACGAGCTCTAG
Protein sequence

>Msa1133540

MARSSSCGSLFLLTIISLGCLFATSAAKEEGTTKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVSFTDDERLIGEAAKNLAAVNPERTIFDVKRLIGRKFEDKEVQRDMKLVPYKIVNKDGKPYIQVRVKDGETKVFSPEEVSAMILTKMKETAEAFLGKTIRDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRIMEYFIKLIKKKHSKDISKDNRALGKLRRESERAKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNNDLFRKTMGPVKKAMDDAGLQKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAFGAAVQGSILSGEGGEETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGNFDLSGIPPAPRGTPQIEVTFEVDANGILNVRAEDKGTGKSEKITITNEKGRLSQEEIDRMVREAEEFAEEDKKVKERIDARNALETYVYNMKNQISDKDKLADKLESDEKEKIEAAVKEALEWLDDNQTVEKEEFEEKLKEVEAVCNPIITAVYQRSGGAPGGASGEGEDEDEDSRDEL*