AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0573010

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0573010 MtrunA17_Chr8g0388761 99.402 669 4 0 1 669 1 669 0.0 1346
Msa0573010 MtrunA17_Chr8g0388671 96.285 646 23 1 1 646 2 646 0.0 1232
Msa0573010 MtrunA17_Chr7g0262821 64.921 630 214 5 36 661 7 633 0.0 837
Msa0573010 MtrunA17_Chr4g0031321 64.263 638 211 5 36 658 7 642 0.0 831
Msa0573010 MtrunA17_Chr4g0031301 65.961 614 203 4 36 645 7 618 0.0 829
Msa0573010 MtrunA17_Chr7g0223181 65.472 614 206 4 36 645 7 618 0.0 828
Msa0573010 MtrunA17_Chr7g0223291 64.038 634 215 5 36 665 7 631 0.0 827
Msa0573010 MtrunA17_Chr4g0073741 64.423 624 214 5 33 652 3 622 0.0 823
Msa0573010 MtrunA17_Chr2g0284681 55.155 611 248 6 33 633 3 597 0.0 670
Msa0573010 MtrunA17_Chr6g0462601 54.125 606 271 5 39 640 10 612 0.0 662
Msa0573010 MtrunA17_Chr6g0462681 53.542 607 275 5 39 641 10 613 0.0 652
Msa0573010 MtrunA17_Chr7g0223751 54.125 606 267 8 36 635 7 607 0.0 647
Msa0573010 MtrunA17_Chr7g0221661 54.486 613 269 7 36 642 7 615 0.0 640
Msa0573010 MtrunA17_Chr2g0298851 55.628 613 259 9 36 640 7 614 0.0 639
Msa0573010 MtrunA17_Chr7g0233311 53.268 612 276 7 36 640 7 615 0.0 636
Msa0573010 MtrunA17_Chr7g0223741 54.223 592 261 7 36 621 7 594 0.0 632
Msa0573010 MtrunA17_Chr5g0427901 52.006 623 278 8 36 641 7 625 0.0 630
Msa0573010 MtrunA17_Chr2g0293581 53.431 612 275 7 36 640 8 616 0.0 630
Msa0573010 MtrunA17_Chr6g0462771 51.535 619 288 6 39 648 10 625 0.0 622
Msa0573010 MtrunA17_Chr7g0223731 52.815 604 274 8 36 633 7 605 0.0 622
Msa0573010 MtrunA17_Chr6g0462641 50.889 619 292 6 39 648 10 625 0.0 621
Msa0573010 MtrunA17_Chr7g0223711 51.320 606 285 7 36 635 7 608 0.0 619
Msa0573010 MtrunA17_Chr7g0223621 52.554 607 275 9 36 635 7 607 0.0 619
Msa0573010 MtrunA17_Chr7g0223851 53.659 615 270 11 36 641 16 624 0.0 619
Msa0573010 MtrunA17_Chr6g0462711 51.774 620 286 7 39 648 11 627 0.0 618
Msa0573010 MtrunA17_Chr7g0223031 51.895 607 281 8 36 636 7 608 0.0 615
Msa0573010 MtrunA17_Chr7g0223721 52.224 607 279 8 36 635 7 609 0.0 613
Msa0573010 MtrunA17_Chr2g0287631 52.874 609 277 7 39 640 10 615 0.0 612
Msa0573010 MtrunA17_Chr8g0350731 49.768 647 307 9 22 662 21 655 0.0 611
Msa0573010 MtrunA17_Chr7g0225671 52.960 625 280 11 25 641 3 621 0.0 609
Msa0573010 MtrunA17_Chr7g0223801 51.555 611 284 8 36 640 7 611 0.0 608
Msa0573010 MtrunA17_Chr7g0223781 51.882 611 282 7 36 640 7 611 0.0 608
Msa0573010 MtrunA17_Chr4g0040931 51.405 605 283 8 36 633 7 607 0.0 603
Msa0573010 MtrunA17_Chr7g0223701 49.756 615 289 10 36 635 7 616 0.0 596
Msa0573010 MtrunA17_Chr2g0298861 50.000 624 289 11 36 640 7 626 0.0 595
Msa0573010 MtrunA17_Chr7g0248131 51.718 611 279 11 36 635 7 612 0.0 591
Msa0573010 MtrunA17_Chr2g0296391 55.153 524 227 5 36 553 7 528 0.0 587
Msa0573010 MtrunA17_Chr2g0279901 53.276 580 244 10 38 609 56 616 0.0 583
Msa0573010 MtrunA17_Chr4g0049501 53.276 580 245 10 38 609 53 614 0.0 580
Msa0573010 MtrunA17_Chr7g0223631 49.751 603 284 9 36 635 7 593 0.0 578
Msa0573010 MtrunA17_Chr7g0248151 51.530 621 287 10 36 647 7 622 0.0 578
Msa0573010 MtrunA17_Chr7g0217971 51.347 594 260 8 36 626 7 574 0.0 577
Msa0573010 MtrunA17_Chr7g0233301 50.245 613 262 10 36 640 7 584 0.0 573
Msa0573010 MtrunA17_Chr7g0223821 51.129 620 285 11 36 643 7 620 0.0 569
Msa0573010 MtrunA17_Chr6g0462611 51.532 555 260 6 91 641 12 561 0.0 561
Msa0573010 MtrunA17_Chr4g0012541 50.163 614 284 11 36 641 7 606 0.0 561
Msa0573010 MtrunA17_Chr2g0277021 48.892 632 285 12 38 658 71 675 0.0 547
Msa0573010 MtrunA17_Chr7g0223831 49.511 614 269 11 36 641 7 587 0.0 544
Msa0573010 MtrunA17_Chr8g0390821 46.434 659 277 13 39 640 12 651 0.0 540
Msa0573010 MtrunA17_Chr7g0215261 48.534 614 268 11 36 640 7 581 0.0 536
Msa0573010 MtrunA17_Chr7g0223541 49.117 566 273 7 101 662 31 585 0.0 533
Msa0573010 MtrunA17_Chr7g0228281 47.635 613 265 9 36 641 68 631 2.17e-180 527
Msa0573010 MtrunA17_Chr7g0223681 50.000 522 252 7 118 635 2 518 2.90e-174 508
Msa0573010 MtrunA17_Chr2g0331381 49.446 542 205 7 37 573 5 482 5.04e-172 499
Msa0573010 MtrunA17_Chr2g0293601 51.556 514 207 6 36 543 7 484 5.65e-172 499
Msa0573010 MtrunA17_Chr2g0299921 62.565 382 140 3 36 415 1027 1407 2.53e-153 486
Msa0573010 MtrunA17_Chr2g0299921 62.963 378 136 4 39 413 1414 1790 3.32e-144 461
Msa0573010 MtrunA17_Chr2g0299821 59.843 381 146 4 36 410 7 386 3.33e-152 449
Msa0573010 MtrunA17_Chr2g0299821 60.000 100 31 2 473 565 387 484 1.04e-25 111
Msa0573010 MtrunA17_Chr2g0299851 61.417 381 144 3 35 413 1035 1414 2.29e-150 471
Msa0573010 MtrunA17_Chr2g0299791 61.155 381 145 3 36 414 1040 1419 8.69e-150 469
Msa0573010 MtrunA17_Chr6g0462861 41.842 619 320 15 39 641 10 604 1.50e-149 448
Msa0573010 MtrunA17_Chr2g0293561 57.995 369 148 4 36 398 7 374 3.82e-148 435
Msa0573010 MtrunA17_Chr1g0166551 42.384 604 226 11 39 635 6 494 2.57e-141 422
Msa0573010 MtrunA17_Chr2g0299881 57.935 397 160 5 38 428 1038 1433 1.26e-140 446
Msa0573010 MtrunA17_Chr2g0299881 58.730 63 25 1 212 274 1414 1475 4.87e-15 79.3
Msa0573010 MtrunA17_Chr2g0293271 43.277 476 177 9 21 479 7 406 4.76e-115 351
Msa0573010 MtrunA17_Chr1g0151991 59.091 286 110 4 36 315 7 291 2.96e-111 337
Msa0573010 MtrunA17_Chr7g0245521 60.300 267 99 4 36 296 7 272 1.67e-105 321
Msa0573010 MtrunA17_Chr7g0245531 46.906 307 160 3 329 635 2 305 1.40e-85 271
Msa0573010 MtrunA17_Chr5g0394391 32.950 522 301 12 29 520 19 521 1.69e-81 269
Msa0573010 MtrunA17_Chr6g0462751 41.834 349 141 5 94 437 12 303 1.73e-81 260
Msa0573010 MtrunA17_Chr6g0462631 44.179 335 138 5 113 441 6 297 6.40e-81 258
Msa0573010 MtrunA17_Chr7g0223761 37.931 377 189 3 265 640 3 335 1.64e-80 259
Msa0573010 MtrunA17_Chr1g0152001 47.475 297 150 6 340 635 2 293 2.62e-78 252
Msa0573010 MtrunA17_Chr4g0004331 36.387 382 236 4 37 413 2 381 1.20e-76 262
Msa0573010 MtrunA17_Chr2g0331901 32.112 464 292 7 37 483 2 459 3.00e-74 256
Msa0573010 MtrunA17_Chr3g0098761 31.034 493 320 11 37 520 2 483 1.86e-73 252
Msa0573010 MtrunA17_Chr5g0444001 32.947 431 275 6 37 457 2 428 2.14e-71 241
Msa0573010 MtrunA17_Chr7g0223671 60.541 185 68 3 101 281 8 191 4.71e-70 226
Msa0573010 MtrunA17_Chr1g0188601 58.163 196 77 3 119 310 1 195 9.64e-69 223
Msa0573010 MtrunA17_Chr1g0188611 42.905 296 158 4 346 640 1 286 5.86e-62 208
Msa0573010 MtrunA17_Chr6g0462791 58.084 167 68 1 143 307 9 175 1.47e-61 203
Msa0573010 MtrunA17_Chr3g0120101 28.932 515 322 12 12 496 8 508 2.43e-61 220
Msa0573010 MtrunA17_Chr7g0223771 60.366 164 56 4 123 278 4 166 1.82e-56 189
Msa0573010 MtrunA17_Chr4g0064621 30.224 536 340 14 39 548 141 668 1.49e-54 198
Msa0573010 MtrunA17_Chr4g0060241 29.880 502 318 12 39 522 21 506 1.56e-53 192
Msa0573010 MtrunA17_Chr4g0046881 62.687 134 47 1 162 292 14 147 3.22e-52 177
Msa0573010 MtrunA17_Chr5g0394221 33.333 312 193 7 307 614 51 351 1.95e-47 171
Msa0573010 MtrunA17_Chr5g0442171 32.537 335 200 8 197 517 1 323 1.07e-46 168
Msa0573010 MtrunA17_Chr7g0223861 62.121 132 45 3 105 232 4 134 1.72e-45 158
Msa0573010 MtrunA17_Chr6g0462691 52.518 139 66 0 346 484 1 139 8.76e-44 154
Msa0573010 MtrunA17_Chr6g0462701 43.548 186 74 4 113 292 6 166 9.00e-40 144
Msa0573010 MtrunA17_Chr7g0245541 39.604 202 120 2 442 643 1 200 1.60e-39 144
Msa0573010 MtrunA17_Chr4g0046871 54.455 101 45 1 360 460 6 105 5.45e-31 117
Msa0573010 MtrunA17_Chr6g0481391 47.154 123 60 3 65 186 13 131 2.85e-29 112
Msa0573010 MtrunA17_Chr5g0394231 32.000 225 103 4 101 323 5 181 4.88e-28 111
Msa0573010 MtrunA17_Chr6g0462621 70.968 62 18 0 39 100 10 71 3.39e-24 96.7
Msa0573010 MtrunA17_Chr7g0223691 70.149 67 18 1 36 100 7 73 3.65e-23 93.6
Msa0573010 MtrunA17_Chr1g0188591 64.179 67 22 1 36 100 7 73 1.11e-22 92.8
Msa0573010 MtrunA17_Chr6g0481381 60.274 73 26 1 204 273 2 74 3.42e-22 94.7
Msa0573010 MtrunA17_Chr6g0481381 39.000 100 59 2 541 639 75 173 7.17e-11 62.0
Msa0573010 MtrunA17_Chr2g0284661 54.118 85 39 0 390 474 59 143 7.57e-22 92.0
Msa0573010 MtrunA17_Chr5g0442161 33.766 154 89 4 39 184 29 177 1.87e-17 80.9
Msa0573010 MtrunA17_Chr4g0064651 38.710 93 57 0 422 514 29 121 1.62e-16 76.3
Msa0573010 MtrunA17_Chr2g0299941 63.636 55 20 0 424 478 23 77 3.12e-15 71.6
Msa0573010 MtrunA17_Chr7g0223871 38.583 127 74 3 517 641 7 131 4.88e-14 69.7
Msa0573010 MtrunA17_Chr7g0221651 38.095 84 52 0 239 322 1 84 1.12e-13 67.0
Msa0573010 MtrunA17_Chr7g0223791 40.426 94 55 1 507 600 89 181 2.24e-13 68.9
Msa0573010 MtrunA17_Chr7g0223791 48.780 82 34 3 83 164 18 91 2.87e-13 68.6
Msa0573010 MtrunA17_Chr7g0223881 43.056 72 40 1 315 386 12 82 5.06e-12 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0573010 AT5G42020.1 89.836 669 67 1 1 669 1 668 0.0 1221
Msa0573010 AT5G28540.1 91.190 647 56 1 1 647 1 646 0.0 1208
Msa0573010 AT5G42020.3 91.091 651 57 1 19 669 24 673 0.0 1207
Msa0573010 AT1G09080.1 77.419 651 142 2 1 647 11 660 0.0 1016
Msa0573010 AT1G09080.2 77.743 647 137 2 1 647 11 650 0.0 1011
Msa0573010 AT5G42020.2 77.015 670 96 5 1 669 1 613 0.0 998
Msa0573010 AT3G12580.1 64.547 629 217 4 36 660 7 633 0.0 832
Msa0573010 AT3G09440.1 66.234 616 198 5 36 645 7 618 0.0 828
Msa0573010 AT3G09440.4 66.234 616 198 5 36 645 7 618 0.0 828
Msa0573010 AT3G09440.2 66.234 616 198 5 36 645 7 618 0.0 828
Msa0573010 AT3G09440.3 66.234 616 198 5 36 645 7 618 0.0 828
Msa0573010 AT5G02500.1 64.984 614 209 4 36 645 7 618 0.0 824
Msa0573010 AT1G16030.1 63.550 631 223 5 33 659 3 630 0.0 824
Msa0573010 AT5G02490.1 64.984 614 209 4 36 645 7 618 0.0 820
Msa0573010 AT1G56410.1 62.704 614 221 4 36 645 7 616 0.0 789
Msa0573010 AT5G09590.1 54.138 580 240 11 38 609 59 620 0.0 584
Msa0573010 AT4G37910.1 54.310 580 239 11 38 609 54 615 0.0 560
Msa0573010 AT4G37910.2 54.310 580 239 11 38 609 54 615 0.0 560
Msa0573010 AT4G24280.1 50.934 589 270 11 38 621 80 654 0.0 548
Msa0573010 AT5G49910.1 49.196 622 292 13 38 654 80 682 0.0 547
Msa0573010 AT5G02500.2 67.010 388 123 3 36 419 7 393 0.0 530
Msa0573010 AT5G02500.2 48.077 104 53 1 542 645 386 488 1.98e-25 111
Msa0573010 AT1G11660.4 28.356 663 400 14 37 639 2 649 7.36e-82 275
Msa0573010 AT1G11660.3 28.356 663 400 14 37 639 2 649 7.36e-82 275
Msa0573010 AT1G11660.1 28.356 663 400 14 37 639 2 649 7.36e-82 275
Msa0573010 AT2G32120.1 32.877 511 312 10 39 534 31 525 2.47e-77 258
Msa0573010 AT2G32120.2 32.877 511 312 10 39 534 31 525 2.47e-77 258
Msa0573010 AT1G79930.2 32.159 454 285 7 37 473 2 449 3.23e-75 257
Msa0573010 AT1G79930.1 32.159 454 285 7 37 473 2 449 5.96e-75 258
Msa0573010 AT1G79920.3 31.718 454 287 7 37 473 2 449 4.29e-74 253
Msa0573010 AT1G79920.2 31.718 454 287 7 37 473 2 449 4.29e-74 253
Msa0573010 AT1G79920.4 31.718 454 287 7 37 473 2 449 4.29e-74 253
Msa0573010 AT1G79920.1 31.718 454 287 7 37 473 2 449 5.05e-74 253
Msa0573010 AT1G11660.2 28.275 626 374 14 74 639 2 612 9.41e-73 249
Msa0573010 AT4G16660.1 26.075 721 403 21 36 639 24 731 8.10e-63 224
Msa0573010 AT4G16660.2 26.075 721 403 21 36 639 48 755 1.00e-62 224

Find 219 sgRNAs with CRISPR-Local

Find 311 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACATCAAAGATGGTCCTTTC+AGG 0.185011 4_1:-76032609 None:intergenic
ACCAAGTTAGGGACTGTTAT+TGG 0.230124 4_1:+76032423 Msa0573010:CDS
ACCGCTGCTGCCATTGCTTA+TGG 0.244088 4_1:+76033154 Msa0573010:CDS
AACATTCTTGTCTTTGATCT+TGG 0.281163 4_1:+76033202 Msa0573010:CDS
GCAAACAACTGTTTCTATTC+AGG 0.282305 4_1:+76034163 Msa0573010:CDS
GGAGCTCCAGGTGGTGCATC+AGG 0.283486 4_1:+76034925 Msa0573010:CDS
TGGTAAACAGCAGTGATAAT+TGG 0.285966 4_1:-76034892 None:intergenic
CTCGGGAACTTTGATTTGTC+TGG 0.291494 4_1:+76034342 Msa0573010:CDS
TTCAAAAGTTGTTGTACCTT+TGG 0.293588 4_1:-76033771 None:intergenic
TTTGATGTCAAGAGACTTAT+CGG 0.304645 4_1:+76032624 Msa0573010:CDS
GAGGAAGGGACCACCAAGTT+AGG 0.330316 4_1:+76032411 Msa0573010:CDS
CAAACGGTATTCTAAATGTT+AGG 0.333992 4_1:+76034521 Msa0573010:CDS
GTTTGTCCTTGTCACTGATT+TGG 0.335858 4_1:-76034729 None:intergenic
TATTTGTGTTTGCTCACATT+TGG 0.338782 4_1:+76034994 Msa0573010:three_prime_UTR
GTGGGGATGACAGTGTTTCT+AGG 0.341786 4_1:-76034104 None:intergenic
TGCTTCTTTCTTCAGATTTG+AGG 0.345147 4_1:+76032738 Msa0573010:intron
ATCTATGAATGAAAATTTCA+TGG 0.348370 4_1:-76035116 None:intergenic
ACCGACGATGAGAGATTGAT+TGG 0.362358 4_1:+76032555 Msa0573010:CDS
AAGGATGCCGGTGTCATTGC+TGG 0.366360 4_1:+76033100 Msa0573010:CDS
TCACAGGTCCCATTGTCTTC+CGG 0.366501 4_1:-76033671 None:intergenic
CTTCTCACCATCATCTCCTT+AGG 0.367766 4_1:+76031681 Msa0573010:CDS
CTTAATTTCGAACATGTCAT+TGG 0.368118 4_1:-76031527 None:intergenic
CCAAGTTAGGGACTGTTATT+GGG 0.369182 4_1:+76032424 Msa0573010:CDS
CTTGTCTTTGATCTTGGAGG+TGG 0.371703 4_1:+76033208 Msa0573010:CDS
CCTTCCCCTGATGCACCACC+TGG 0.374305 4_1:-76034931 None:intergenic
TGGCTCGCTCTTCTTCTTGC+GGG 0.374938 4_1:+76031649 Msa0573010:CDS
ACTGTTATTGGGATAGATCT+TGG 0.377061 4_1:+76032435 Msa0573010:CDS
ACTCTTCTTTCTCAACAGTT+TGG 0.379400 4_1:-76034831 None:intergenic
GTCCTAACTTGATTTACAAT+TGG 0.383186 4_1:+76031492 Msa0573010:five_prime_UTR
CCATTCAAGTGCTTCTTTCA+CGG 0.386836 4_1:-76034797 None:intergenic
ACAAAGGATTGCCGTCTTCT+CGG 0.387262 4_1:+76034324 Msa0573010:CDS
CTTCACTTTCTTGTCTTCCT+CGG 0.392206 4_1:-76034653 None:intergenic
CCAAAGGCAACTGCTTCATC+AGG 0.398543 4_1:-76033834 None:intergenic
TTTACTCTGACCTGAATGTA+TGG 0.402451 4_1:-76032823 None:intergenic
ATTCTTGTCTTTGATCTTGG+AGG 0.402766 4_1:+76033205 Msa0573010:CDS
TTTCTTCAGATTTGAGGATA+AGG 0.403180 4_1:+76032744 Msa0573010:intron
CATCAAAGATGGTCCTTTCA+GGG 0.407212 4_1:-76032608 None:intergenic
AGTTGAACAATGACTTGTTC+CGG 0.409326 4_1:+76033652 Msa0573010:CDS
CAAAGGATTGCCGTCTTCTC+GGG 0.410284 4_1:+76034325 Msa0573010:CDS
TTACAGCTTTCTGTACTGTT+TGG 0.415343 4_1:+76035199 Msa0573010:three_prime_UTR
TGGGGAGGCTGCGAAGAATC+TGG 0.418293 4_1:+76032575 Msa0573010:CDS
TACATATGTTAGAATGTTGA+TGG 0.419263 4_1:+76035306 Msa0573010:three_prime_UTR
GATCACCATTACAAATGAAA+AGG 0.423968 4_1:+76034576 Msa0573010:CDS
GTATCCAGATATCCTTCTCT+TGG 0.424894 4_1:+76034022 Msa0573010:intron
GGTAAACAGCAGTGATAATT+GGG 0.429598 4_1:-76034891 None:intergenic
ATCATGGCACTGACTTCCTC+AGG 0.433544 4_1:-76032871 None:intergenic
ATTGATGAGATTGTTCTTGT+TGG 0.434577 4_1:+76033732 Msa0573010:CDS
CTGGCTACTAAGAGCTCTCT+TGG 0.435105 4_1:-76033550 None:intergenic
CCCAATAACAGTCCCTAACT+TGG 0.435276 4_1:-76032424 None:intergenic
GATGTTGCACCTCTTACCCT+TGG 0.436670 4_1:+76034044 Msa0573010:CDS
TATTATGAATAGGTGTTTGA+AGG 0.440657 4_1:+76034288 Msa0573010:intron
CTTCATCTTAGTCAGAATCA+TGG 0.442913 4_1:-76032887 None:intergenic
AAACAGTTGTTTGCTGATCC+TGG 0.445328 4_1:-76034154 None:intergenic
TGCAACATCTGCTGCAAAAG+AGG 0.446763 4_1:+76032392 Msa0573010:CDS
CAAGTTGGAATCAGATGAAA+AGG 0.446989 4_1:+76034759 Msa0573010:CDS
GACCAATTGTAAATCAAGTT+AGG 0.447764 4_1:-76031494 None:intergenic
CAAAGGTCACTTCAATTTGA+GGG 0.447858 4_1:-76034489 None:intergenic
GGACTTTGATCAGAGAATAA+TGG 0.449888 4_1:+76033434 Msa0573010:CDS
TCAAAGGTCACTTCAATTTG+AGG 0.450757 4_1:-76034490 None:intergenic
CAGAGGTCAGGTGGAGCTCC+AGG 0.453414 4_1:+76034913 Msa0573010:CDS
CCTGATGAAGCAGTTGCCTT+TGG 0.453901 4_1:+76033834 Msa0573010:CDS
AGCAATGACACCGGCATCCT+TGG 0.458285 4_1:-76033098 None:intergenic
CCGACGATGAGAGATTGATT+GGG 0.463196 4_1:+76032556 Msa0573010:CDS
GGTCAATCTCCTCCTGGCTC+AGG 0.466292 4_1:-76034603 None:intergenic
GACTTGTTCCGGAAGACAAT+GGG 0.468406 4_1:+76033663 Msa0573010:CDS
GTTTCAATTCCAAGGGTAAG+AGG 0.470308 4_1:-76034053 None:intergenic
GTATCTTTCTTCTAATCCTA+CGG 0.471345 4_1:-76035286 None:intergenic
GGATGGAAAACCATACATTC+AGG 0.477959 4_1:+76032813 Msa0573010:CDS
TCGTCCATTGCCTTCTTCAC+AGG 0.478204 4_1:-76033687 None:intergenic
TGAAAAGGGACGCCTGAGCC+AGG 0.478721 4_1:+76034591 Msa0573010:CDS
TTTGAGGTTCTTTCTACAAA+CGG 0.480420 4_1:+76033271 Msa0573010:CDS
CTCCAACAGTTTCAATTCCA+AGG 0.480598 4_1:-76034061 None:intergenic
CGGTTCTCTGCATAAACGCC+CGG 0.484216 4_1:-76035266 None:intergenic
TCCTTGTTGACAATCTTGTA+AGG 0.485086 4_1:-76032793 None:intergenic
ATGGCTCGCTCTTCTTCTTG+CGG 0.485978 4_1:+76031648 Msa0573010:CDS
TTTCCACACGGACTTGGTGC+TGG 0.487623 4_1:-76033569 None:intergenic
TGCTGCCATTGCTTATGGAT+TGG 0.489882 4_1:+76033159 Msa0573010:CDS
GATGCCGTGGTCACTGTCCC+AGG 0.494172 4_1:+76032946 Msa0573010:CDS
GTCTTCCTCGGCAAACTCCT+CGG 0.495002 4_1:-76034641 None:intergenic
CCTGGTAGGTGGTAAACACC+TGG 0.496443 4_1:-76034136 None:intergenic
AATGACACCGGCATCCTTGG+TGG 0.499327 4_1:-76033095 None:intergenic
CGCAGTAGAGCGACTTACAA+AGG 0.501070 4_1:+76031421 Msa0573010:five_prime_UTR
ATCACCATTACAAATGAAAA+GGG 0.502193 4_1:+76034577 Msa0573010:CDS
ACTCAATTTCCACACGGACT+TGG 0.504632 4_1:-76033575 None:intergenic
CTGGAGCTCCACCTGACCTC+TGG 0.505070 4_1:-76034912 None:intergenic
CTTCAATGATGCTCAGAGGC+AGG 0.507132 4_1:+76033072 Msa0573010:CDS
GACAATGGGACCTGTGAAGA+AGG 0.509040 4_1:+76033677 Msa0573010:CDS
AGTGATAATTGGGTTGCAAA+CGG 0.511011 4_1:-76034881 None:intergenic
ACCCTTGGAATTGAAACTGT+TGG 0.511117 4_1:+76034059 Msa0573010:CDS
GAAAGAAGCACTTGAATGGC+TGG 0.513283 4_1:+76034801 Msa0573010:CDS
GCTTATGGATTGGACAAGAA+AGG 0.514548 4_1:+76033169 Msa0573010:CDS
TCTATGAATGAAAATTTCAT+GGG 0.516037 4_1:-76035115 None:intergenic
CATGATTCTGACTAAGATGA+AGG 0.516191 4_1:+76032888 Msa0573010:CDS
TCCTTGCACTGCAGCACCAA+AGG 0.516370 4_1:-76033850 None:intergenic
AAACGGTATTCTAAATGTTA+GGG 0.516624 4_1:+76034522 Msa0573010:CDS
GAGCTCCAGGTGGTGCATCA+GGG 0.517615 4_1:+76034926 Msa0573010:CDS
CCATCCGGTCAATCTCCTCC+TGG 0.517789 4_1:-76034609 None:intergenic
TCAAATCGAGCACGGGTAAG+TGG 0.518725 4_1:-76033627 None:intergenic
AAGAAGGCAATGGACGATGC+TGG 0.518963 4_1:+76033693 Msa0573010:CDS
GAAGGATTACTTTGATGGAA+AGG 0.521373 4_1:+76033791 Msa0573010:CDS
GATACGATTTCCTTGGTCGT+TGG 0.522054 4_1:-76032511 None:intergenic
GGACAAACTTGCTGACAAGT+TGG 0.525676 4_1:+76034744 Msa0573010:CDS
TTCTAGCTCTACTTCAGAAG+TGG 0.525697 4_1:-76035020 None:intergenic
AAAACAAACCTTGGAGCTGG+TGG 0.525948 4_1:-76034369 None:intergenic
TACAAGATTGTCAACAAGGA+TGG 0.525974 4_1:+76032796 Msa0573010:CDS
AGGAAGGGACCACCAAGTTA+GGG 0.527633 4_1:+76032412 Msa0573010:CDS
AGCAAGGACAACAGAGCACT+TGG 0.529505 4_1:+76033501 Msa0573010:CDS
ATAAGCAATGGCAGCAGCGG+TGG 0.530847 4_1:-76033152 None:intergenic
TGATGGAAAGGAACCAAACA+AGG 0.531735 4_1:+76033803 Msa0573010:CDS
ACTGCTGTTTACCAGAGGTC+AGG 0.531930 4_1:+76034901 Msa0573010:CDS
ACCGTTTGCATCTACTTCAA+AGG 0.532713 4_1:-76034506 None:intergenic
GAAATCGTATCACACCATCA+TGG 0.533173 4_1:+76032523 Msa0573010:CDS
AGGCAGGCCACCAAGGATGC+CGG 0.534449 4_1:+76033088 Msa0573010:CDS
AATAGGTGTTTGAAGGTGAG+AGG 0.535211 4_1:+76034295 Msa0573010:intron
CCTCGGCTTCACGAACCATC+CGG 0.536252 4_1:-76034624 None:intergenic
GATGAGATTGTTCTTGTTGG+TGG 0.537949 4_1:+76033735 Msa0573010:CDS
AAATCGTATCACACCATCAT+GGG 0.540268 4_1:+76032524 Msa0573010:CDS
TCTAGCTCTACTTCAGAAGT+GGG 0.542878 4_1:-76035019 None:intergenic
CCGTGAAAGAAGCACTTGAA+TGG 0.543546 4_1:+76034797 Msa0573010:CDS
TGAGCCAGGAGGAGATTGAC+CGG 0.543601 4_1:+76034605 Msa0573010:CDS
TGGCAGCTGTCAACCCTGAA+AGG 0.545326 4_1:+76032595 Msa0573010:CDS
ACAAACGGAGATACCCATCT+TGG 0.546553 4_1:+76033286 Msa0573010:CDS
TAGAAATGATGAGAATTAGT+AGG 0.546567 4_1:+76035038 Msa0573010:three_prime_UTR
TGTGTTGGTGTTTACAAGAA+CGG 0.547276 4_1:+76032471 Msa0573010:CDS
AAATGTTAGGGCAGAAGACA+AGG 0.547526 4_1:+76034534 Msa0573010:CDS
GAGCACTTGGAAAGCTGAGG+AGG 0.547900 4_1:+76033514 Msa0573010:CDS
CTTGGAATTGAAACTGTTGG+AGG 0.549933 4_1:+76034062 Msa0573010:CDS
GAAACCGCTGAAGCATTCCT+TGG 0.551326 4_1:+76032910 Msa0573010:CDS
AAGTCTCTTGACATCAAAGA+TGG 0.553461 4_1:-76032619 None:intergenic
ATAAGTACTCACCTCCAAGA+TGG 0.554153 4_1:-76033300 None:intergenic
GCCTTTGGTGCTGCAGTGCA+AGG 0.554487 4_1:+76033849 Msa0573010:CDS
CACAAAACAAACCTTGGAGC+TGG 0.555992 4_1:-76034372 None:intergenic
AGCTCCAGGTGGTGCATCAG+GGG 0.556960 4_1:+76034927 Msa0573010:CDS
ATACATTCAGGTCAGAGTAA+AGG 0.559988 4_1:+76032825 Msa0573010:CDS
ACCTTTGAAGTAGATGCAAA+CGG 0.560638 4_1:+76034505 Msa0573010:CDS
CCAGGTGGTGCATCAGGGGA+AGG 0.561188 4_1:+76034931 Msa0573010:CDS
TGCTCAGAGGCAGGCCACCA+AGG 0.561411 4_1:+76033081 Msa0573010:CDS
CCAGGTGTTTACCACCTACC+AGG 0.561692 4_1:+76034136 Msa0573010:CDS
TTCCTCAGGGCTGAACACCT+TGG 0.565203 4_1:-76032857 None:intergenic
CTGGAATCCCACCAGCTCCA+AGG 0.566039 4_1:+76034361 Msa0573010:CDS
ACATCTGCTGCAAAAGAGGA+AGG 0.567823 4_1:+76032396 Msa0573010:CDS
GCGTTTATGCAGAGAACCGT+AGG 0.568337 4_1:+76035270 Msa0573010:three_prime_UTR
CCCAATCAATCTCTCATCGT+CGG 0.570425 4_1:-76032556 None:intergenic
TAAGTACTCACCTCCAAGAT+GGG 0.574552 4_1:-76033299 None:intergenic
TGGTGCATCAGGGGAAGGAG+AGG 0.575558 4_1:+76034936 Msa0573010:CDS
TCCAACAGTTTCAATTCCAA+GGG 0.575984 4_1:-76034060 None:intergenic
TGACTTGTTCCGGAAGACAA+TGG 0.576660 4_1:+76033662 Msa0573010:CDS
TCCTTACAAGATTGTCAACA+AGG 0.577546 4_1:+76032792 Msa0573010:CDS
AATAACAGTCCCTAACTTGG+TGG 0.577985 4_1:-76032421 None:intergenic
CCAGGAGGAGATTGACCGGA+TGG 0.580479 4_1:+76034609 Msa0573010:CDS
AATCAAAGTTCCCGAGAAGA+CGG 0.581537 4_1:-76034335 None:intergenic
AACGGAGATACCCATCTTGG+AGG 0.583876 4_1:+76033289 Msa0573010:CDS
ATAATTACCTAAGGAGATGA+TGG 0.583921 4_1:-76031688 None:intergenic
GCAGTAGAGCGACTTACAAA+GGG 0.585239 4_1:+76031422 Msa0573010:five_prime_UTR
TCCATAAGCAATGGCAGCAG+CGG 0.585512 4_1:-76033155 None:intergenic
CTTGTCCAATCCATAAGCAA+TGG 0.592089 4_1:-76033164 None:intergenic
CAACTCTTCAAATCGAGCAC+GGG 0.593000 4_1:-76033634 None:intergenic
TGAAGGAAAGAATTGATGCT+CGG 0.593052 4_1:+76034671 Msa0573010:CDS
TCAACTCTTCAAATCGAGCA+CGG 0.593848 4_1:-76033635 None:intergenic
AGGGCAGAAGACAAGGGCAC+AGG 0.595427 4_1:+76034541 Msa0573010:CDS
CACACAAGAGGCAATCCCAT+TGG 0.596022 4_1:+76031461 Msa0573010:five_prime_UTR
GGAACAACATATTCATGTGT+TGG 0.597629 4_1:+76032456 Msa0573010:CDS
ATGGTGTGATACGATTTCCT+TGG 0.600611 4_1:-76032518 None:intergenic
GCTGTTTACCAGAGGTCAGG+TGG 0.602705 4_1:+76034904 Msa0573010:CDS
CCGGATGGTTCGTGAAGCCG+AGG 0.603140 4_1:+76034624 Msa0573010:CDS
AAAGGTCACTTCAATTTGAG+GGG 0.605663 4_1:-76034488 None:intergenic
GAGGTGCAACATCCAAGAGA+AGG 0.607551 4_1:-76034034 None:intergenic
TAAGCAATGGCAGCAGCGGT+GGG 0.609672 4_1:-76033151 None:intergenic
AGCACTTGGAAAGCTGAGGA+GGG 0.611229 4_1:+76033515 Msa0573010:CDS
CGATGAGAGATTGATTGGGG+AGG 0.612921 4_1:+76032560 Msa0573010:CDS
CTTGCCAAGGAATGCTTCAG+CGG 0.613919 4_1:-76032914 None:intergenic
ACATATGTTAGAATGTTGAT+GGG 0.614530 4_1:+76035307 Msa0573010:three_prime_UTR
GACATGTTCCTACACACAAG+AGG 0.620463 4_1:+76031449 Msa0573010:five_prime_UTR
CGAGGAAGACAAGAAAGTGA+AGG 0.622597 4_1:+76034654 Msa0573010:CDS
GCATAGCAAGGATATTAGCA+AGG 0.623368 4_1:+76033485 Msa0573010:CDS
CGACGATGAGAGATTGATTG+GGG 0.628193 4_1:+76032557 Msa0573010:CDS
TGTTTGCTGATCCTGGTAGG+TGG 0.630248 4_1:-76034147 None:intergenic
ATGAGAATTAGTAGGTCAAG+CGG 0.630667 4_1:+76035046 Msa0573010:three_prime_UTR
CAAGACTATTCGTGATGCCG+TGG 0.630982 4_1:+76032933 Msa0573010:CDS
GGTTCTCTGCATAAACGCCC+GGG 0.633048 4_1:-76035265 None:intergenic
ACATGTCATTGGTGATTACG+TGG 0.633496 4_1:-76031516 None:intergenic
GAAATCATAGCCAACGACCA+AGG 0.633608 4_1:+76032501 Msa0573010:CDS
CTGGTAGGTGGTAAACACCT+GGG 0.633786 4_1:-76034135 None:intergenic
TCTTTGAATCACAACAAAGA+CGG 0.634288 4_1:+76031606 Msa0573010:five_prime_UTR
AGGTCAGGTGGAGCTCCAGG+TGG 0.634814 4_1:+76034916 Msa0573010:CDS
TTCTTGTTGGTGGAAGCACA+AGG 0.637706 4_1:+76033745 Msa0573010:CDS
AAACAAACCTTGGAGCTGGT+GGG 0.639146 4_1:-76034368 None:intergenic
GGGACCTGTGAAGAAGGCAA+TGG 0.639949 4_1:+76033683 Msa0573010:CDS
TTCACCTGGGACAGTGACCA+CGG 0.640825 4_1:-76032950 None:intergenic
TGGGATTGCCTCTTGTGTGT+AGG 0.640932 4_1:-76031457 None:intergenic
AGTTGTTTGCTGATCCTGGT+AGG 0.644960 4_1:-76034150 None:intergenic
TGAAGCCGAGGAGTTTGCCG+AGG 0.647044 4_1:+76034636 Msa0573010:CDS
TATGGATTGGACAAGAAAGG+TGG 0.647597 4_1:+76033172 Msa0573010:CDS
CAAAGGCAACTGCTTCATCA+GGG 0.652946 4_1:-76033833 None:intergenic
GATGGAAAGGAACCAAACAA+GGG 0.654365 4_1:+76033804 Msa0573010:CDS
AGTAAAGGATGGTGAGACCA+AGG 0.655359 4_1:+76032840 Msa0573010:CDS
TGTCATTGCTGGTTTGAACG+TGG 0.655475 4_1:+76033111 Msa0573010:CDS
TTATCACTGCTGTTTACCAG+AGG 0.655496 4_1:+76034896 Msa0573010:CDS
CATCTGCTGCAAAAGAGGAA+GGG 0.658549 4_1:+76032397 Msa0573010:CDS
ATGGAAAGGAACCAAACAAG+GGG 0.659203 4_1:+76033805 Msa0573010:CDS
ATTCAGGTCAGAGTAAAGGA+TGG 0.659644 4_1:+76032829 Msa0573010:CDS
TCATGGCACTGACTTCCTCA+GGG 0.661707 4_1:-76032870 None:intergenic
GCAAGAAGAAGAGCGAGCCA+TGG 0.662253 4_1:-76031646 None:intergenic
ACAGAGCACTTGGAAAGCTG+AGG 0.662613 4_1:+76033511 Msa0573010:CDS
GTTCAAACCAGCAATGACAC+CGG 0.667444 4_1:-76033107 None:intergenic
TCGGTGAAAGAAACCCATGA+TGG 0.669628 4_1:-76032537 None:intergenic
CATCACGAATAGTCTTGCCA+AGG 0.671739 4_1:-76032927 None:intergenic
GACCAAGGTGTTCAGCCCTG+AGG 0.674395 4_1:+76032855 Msa0573010:CDS
GAGGGTGGTGAAGAAACTAA+AGG 0.678956 4_1:+76033888 Msa0573010:CDS
TAGCCAGCACCAAGTCCGTG+TGG 0.679452 4_1:+76033566 Msa0573010:CDS
TGGAAGCACAAGGATTCCAA+AGG 0.684118 4_1:+76033755 Msa0573010:CDS
AATGTTAGGGCAGAAGACAA+GGG 0.691069 4_1:+76034535 Msa0573010:CDS
AAAGGGACGCCTGAGCCAGG+AGG 0.695460 4_1:+76034594 Msa0573010:CDS
AGGTGAGAGGAGTCTCACAA+AGG 0.713013 4_1:+76034308 Msa0573010:CDS
TGATACATCTCACAACACCA+TGG 0.713815 4_1:+76031629 Msa0573010:exon
CTTACTTCAATGATGCTCAG+AGG 0.721672 4_1:+76033068 Msa0573010:CDS
AGTATCTTGACAATTGACAA+TGG 0.727159 4_1:+76033244 Msa0573010:CDS
AAAGTGACTCAATTTCCACA+CGG 0.743191 4_1:-76033581 None:intergenic
TGGAAAGGAACCAAACAAGG+GGG 0.770257 4_1:+76033806 Msa0573010:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAATTAACAGTCTTTAAA+AGG - chr4_1:76032013-76032032 None:intergenic 15.0%
!! AACATAAATCAACTATTTAA+AGG - chr4_1:76032257-76032276 None:intergenic 15.0%
!! AAAACTCAAAACATTTAAAT+CGG - chr4_1:76032330-76032349 None:intergenic 15.0%
!! TTGTTATAATTTGATGTAAT+AGG + chr4_1:76032698-76032717 Msa0573010:intron 15.0%
!!! TTGTTAAATTTTTATGATCA+TGG + chr4_1:76035078-76035097 Msa0573010:three_prime_UTR 15.0%
!!! TGTTAAATTTTTATGATCAT+GGG + chr4_1:76035079-76035098 Msa0573010:three_prime_UTR 15.0%
!!! GTTTTAGATCTTTGATTTTA+TGG + chr4_1:76031781-76031800 Msa0573010:intron 20.0%
!!! TTGTTTTGTTTTGAATTTTG+TGG + chr4_1:76031951-76031970 Msa0573010:intron 20.0%
!! AACAAATAAAAAGGTCTAAT+TGG - chr4_1:76032075-76032094 None:intergenic 20.0%
!!! ATTAGACCTTTTTATTTGTT+TGG + chr4_1:76032075-76032094 Msa0573010:intron 20.0%
!! GATAATCCAAACAAATAAAA+AGG - chr4_1:76032084-76032103 None:intergenic 20.0%
!! ATTACAAATAGAACCTTAAA+CGG - chr4_1:76032230-76032249 None:intergenic 20.0%
!!! TAGTTGATTTATGTTGTTTT+CGG + chr4_1:76032262-76032281 Msa0573010:intron 20.0%
!! TGTTAAAATGAAGACAAAAT+GGG - chr4_1:76033022-76033041 None:intergenic 20.0%
!! ATGTTAAAATGAAGACAAAA+TGG - chr4_1:76033023-76033042 None:intergenic 20.0%
!! TACACAATATTGTATTTAGA+AGG - chr4_1:76034229-76034248 None:intergenic 20.0%
!! AAATACAATATTGTGTAATG+AGG + chr4_1:76034232-76034251 Msa0573010:intron 20.0%
!! AATACAATATTGTGTAATGA+GGG + chr4_1:76034233-76034252 Msa0573010:intron 20.0%
!!! TGTCTGTTTTTATTATGAAT+AGG + chr4_1:76034278-76034297 Msa0573010:intron 20.0%
!!! TGATTAATCAATTTTTCTTG+TGG + chr4_1:76034449-76034468 Msa0573010:intron 20.0%
!! TCTATGAATGAAAATTTCAT+GGG - chr4_1:76035118-76035137 None:intergenic 20.0%
!! ATCTATGAATGAAAATTTCA+TGG - chr4_1:76035119-76035138 None:intergenic 20.0%
!! AAAAAAACTAGACACAAAAA+AGG - chr4_1:76035159-76035178 None:intergenic 20.0%
! AGATATGTGATAATTACCTA+AGG - chr4_1:76031700-76031719 None:intergenic 25.0%
! ACAAAAGCAATGAGAAAAAA+AGG - chr4_1:76031760-76031779 None:intergenic 25.0%
! TTAATTAATACAATTACGCG+CGG + chr4_1:76032024-76032043 Msa0573010:intron 25.0%
!!! TTACCAGTGATTTATTTTAC+TGG + chr4_1:76032141-76032160 Msa0573010:intron 25.0%
!!! TTTATTTTACTGGCTTCAAA+TGG + chr4_1:76032151-76032170 Msa0573010:intron 25.0%
! AACGGAAAAAAACATGATTA+TGG - chr4_1:76032212-76032231 None:intergenic 25.0%
!!! ATCATGTTTTTTTCCGTTTA+AGG + chr4_1:76032214-76032233 Msa0573010:intron 25.0%
!!! AGTTGATTTATGTTGTTTTC+GGG + chr4_1:76032263-76032282 Msa0573010:intron 25.0%
! GTTAAAATGAAGACAAAATG+GGG - chr4_1:76033021-76033040 None:intergenic 25.0%
!!! TGTCTTCATTTTAACATTTC+TGG + chr4_1:76033026-76033045 Msa0573010:intron 25.0%
!!! TATTTGTTATTGATGCAAGT+AGG + chr4_1:76033959-76033978 Msa0573010:intron 25.0%
! ATACAATATTGTGTAATGAG+GGG + chr4_1:76034234-76034253 Msa0573010:intron 25.0%
! TATTATGAATAGGTGTTTGA+AGG + chr4_1:76034288-76034307 Msa0573010:intron 25.0%
! AAACGGTATTCTAAATGTTA+GGG + chr4_1:76034522-76034541 Msa0573010:CDS 25.0%
! ATCACCATTACAAATGAAAA+GGG + chr4_1:76034577-76034596 Msa0573010:CDS 25.0%
! AGATGAAAAGGAAAAAATTG+AGG + chr4_1:76034771-76034790 Msa0573010:CDS 25.0%
! TAGAAATGATGAGAATTAGT+AGG + chr4_1:76035038-76035057 Msa0573010:three_prime_UTR 25.0%
! TACATATGTTAGAATGTTGA+TGG + chr4_1:76035306-76035325 Msa0573010:three_prime_UTR 25.0%
! ACATATGTTAGAATGTTGAT+GGG + chr4_1:76035307-76035326 Msa0573010:three_prime_UTR 25.0%
GTCCTAACTTGATTTACAAT+TGG + chr4_1:76031492-76031511 Msa0573010:five_prime_UTR 30.0%
GACCAATTGTAAATCAAGTT+AGG - chr4_1:76031497-76031516 None:intergenic 30.0%
CTTAATTTCGAACATGTCAT+TGG - chr4_1:76031530-76031549 None:intergenic 30.0%
TCTTTGAATCACAACAAAGA+CGG + chr4_1:76031606-76031625 Msa0573010:five_prime_UTR 30.0%
ATAATTACCTAAGGAGATGA+TGG - chr4_1:76031691-76031710 None:intergenic 30.0%
ATTAGAATGTGATGCAAGTA+GGG - chr4_1:76031830-76031849 None:intergenic 30.0%
AATTAGAATGTGATGCAAGT+AGG - chr4_1:76031831-76031850 None:intergenic 30.0%
AAGCCAGTAAAATAAATCAC+TGG - chr4_1:76032147-76032166 None:intergenic 30.0%
!!! TTTTCGGGTAATGCTTTTAT+GGG + chr4_1:76032278-76032297 Msa0573010:intron 30.0%
! TTTTATGGGATGTGATTACA+TGG + chr4_1:76032292-76032311 Msa0573010:intron 30.0%
TTGTCGTTATAATATTGCGA+TGG + chr4_1:76032349-76032368 Msa0573010:intron 30.0%
TTTGATGTCAAGAGACTTAT+CGG + chr4_1:76032624-76032643 Msa0573010:CDS 30.0%
TTTCTTCAGATTTGAGGATA+AGG + chr4_1:76032744-76032763 Msa0573010:intron 30.0%
GAAAATAACCAAATTGCATG+AGG - chr4_1:76032996-76033015 None:intergenic 30.0%
AACATTCTTGTCTTTGATCT+TGG + chr4_1:76033202-76033221 Msa0573010:CDS 30.0%
AGTATCTTGACAATTGACAA+TGG + chr4_1:76033244-76033263 Msa0573010:CDS 30.0%
!! AATTGACAATGGTGTTTTTG+AGG + chr4_1:76033255-76033274 Msa0573010:CDS 30.0%
! TTTGAGGTTCTTTCTACAAA+CGG + chr4_1:76033271-76033290 Msa0573010:CDS 30.0%
TAACTCTTCAATTGTTTACC+AGG + chr4_1:76033408-76033427 Msa0573010:intron 30.0%
!!! GAAATTGAGTCACTTTTTGA+TGG + chr4_1:76033588-76033607 Msa0573010:CDS 30.0%
ATTGATGAGATTGTTCTTGT+TGG + chr4_1:76033732-76033751 Msa0573010:CDS 30.0%
TTCAAAAGTTGTTGTACCTT+TGG - chr4_1:76033774-76033793 None:intergenic 30.0%
!! AAAGGTACAACAACTTTTGA+AGG + chr4_1:76033773-76033792 Msa0573010:CDS 30.0%
!! CTTTTGAAGGATTACTTTGA+TGG + chr4_1:76033786-76033805 Msa0573010:CDS 30.0%
TGATATCACAAAACAAACCT+TGG - chr4_1:76034381-76034400 None:intergenic 30.0%
CTTCTATGAACTTTCTCTAT+TGG + chr4_1:76034407-76034426 Msa0573010:intron 30.0%
CAAACGGTATTCTAAATGTT+AGG + chr4_1:76034521-76034540 Msa0573010:CDS 30.0%
GATCACCATTACAAATGAAA+AGG + chr4_1:76034576-76034595 Msa0573010:CDS 30.0%
! GTTTTTCATGTTGTAGACAT+AGG - chr4_1:76034710-76034729 None:intergenic 30.0%
TATTTGTGTTTGCTCACATT+TGG + chr4_1:76034994-76035013 Msa0573010:three_prime_UTR 30.0%
GTATCTTTCTTCTAATCCTA+CGG - chr4_1:76035289-76035308 None:intergenic 30.0%
!! TTAGGACAGTTTTAGCCAAT+GGG - chr4_1:76031479-76031498 None:intergenic 35.0%
!!! GTTTTCGGGTAATGCTTTTA+TGG + chr4_1:76032277-76032296 Msa0573010:intron 35.0%
ATATTGCGATGGTTTATTGC+AGG + chr4_1:76032360-76032379 Msa0573010:intron 35.0%
ACTGTTATTGGGATAGATCT+TGG + chr4_1:76032435-76032454 Msa0573010:CDS 35.0%
GGAACAACATATTCATGTGT+TGG + chr4_1:76032456-76032475 Msa0573010:CDS 35.0%
! TGTGTTGGTGTTTACAAGAA+CGG + chr4_1:76032471-76032490 Msa0573010:CDS 35.0%
AAATCGTATCACACCATCAT+GGG + chr4_1:76032524-76032543 Msa0573010:CDS 35.0%
AAGTCTCTTGACATCAAAGA+TGG - chr4_1:76032622-76032641 None:intergenic 35.0%
TGCTTCTTTCTTCAGATTTG+AGG + chr4_1:76032738-76032757 Msa0573010:intron 35.0%
TCCTTACAAGATTGTCAACA+AGG + chr4_1:76032792-76032811 Msa0573010:CDS 35.0%
TCCTTGTTGACAATCTTGTA+AGG - chr4_1:76032796-76032815 None:intergenic 35.0%
TACAAGATTGTCAACAAGGA+TGG + chr4_1:76032796-76032815 Msa0573010:CDS 35.0%
TTTACTCTGACCTGAATGTA+TGG - chr4_1:76032826-76032845 None:intergenic 35.0%
ATACATTCAGGTCAGAGTAA+AGG + chr4_1:76032825-76032844 Msa0573010:CDS 35.0%
CTTCATCTTAGTCAGAATCA+TGG - chr4_1:76032890-76032909 None:intergenic 35.0%
CATGATTCTGACTAAGATGA+AGG + chr4_1:76032888-76032907 Msa0573010:CDS 35.0%
! AACTTGTTCCTCATGCAATT+TGG + chr4_1:76032985-76033004 Msa0573010:intron 35.0%
ATTCTTGTCTTTGATCTTGG+AGG + chr4_1:76033205-76033224 Msa0573010:CDS 35.0%
ACAATTGAAGAGTTAGCACT+TGG - chr4_1:76033403-76033422 None:intergenic 35.0%
GGACTTTGATCAGAGAATAA+TGG + chr4_1:76033434-76033453 Msa0573010:CDS 35.0%
! GATCAAGAAAAAGCATAGCA+AGG + chr4_1:76033473-76033492 Msa0573010:CDS 35.0%
AAAGTGACTCAATTTCCACA+CGG - chr4_1:76033584-76033603 None:intergenic 35.0%
!! AGTTGAACAATGACTTGTTC+CGG + chr4_1:76033652-76033671 Msa0573010:CDS 35.0%
GAAGGATTACTTTGATGGAA+AGG + chr4_1:76033791-76033810 Msa0573010:CDS 35.0%
GGCTAGAGTATAGACTATAA+TGG - chr4_1:76033916-76033935 None:intergenic 35.0%
! TCTAGCCTTTCAATTGCATT+AGG + chr4_1:76033929-76033948 Msa0573010:intron 35.0%
AGCTACCTAATGCAATTGAA+AGG - chr4_1:76033937-76033956 None:intergenic 35.0%
! CAATGAGAGAGTGTAATACT+AGG - chr4_1:76033988-76034007 None:intergenic 35.0%
TCCAACAGTTTCAATTCCAA+GGG - chr4_1:76034063-76034082 None:intergenic 35.0%
!! GCAAACAACTGTTTCTATTC+AGG + chr4_1:76034163-76034182 Msa0573010:CDS 35.0%
AGCAATATGCAGTGGAATAA+TGG - chr4_1:76034196-76034215 None:intergenic 35.0%
TTATTCCACTGCATATTGCT+AGG + chr4_1:76034196-76034215 Msa0573010:intron 35.0%
AATAAAAACAGACAACACCC+CGG - chr4_1:76034272-76034291 None:intergenic 35.0%
TTCTTGTGGTAATTGAACAG+AGG + chr4_1:76034463-76034482 Msa0573010:intron 35.0%
AAAGGTCACTTCAATTTGAG+GGG - chr4_1:76034491-76034510 None:intergenic 35.0%
CAAAGGTCACTTCAATTTGA+GGG - chr4_1:76034492-76034511 None:intergenic 35.0%
TCAAAGGTCACTTCAATTTG+AGG - chr4_1:76034493-76034512 None:intergenic 35.0%
!! ACCTTTGAAGTAGATGCAAA+CGG + chr4_1:76034505-76034524 Msa0573010:CDS 35.0%
TGAAGGAAAGAATTGATGCT+CGG + chr4_1:76034671-76034690 Msa0573010:CDS 35.0%
GAAAAACCAAATCAGTGACA+AGG + chr4_1:76034723-76034742 Msa0573010:CDS 35.0%
! CAAGTTGGAATCAGATGAAA+AGG + chr4_1:76034759-76034778 Msa0573010:CDS 35.0%
ACTCTTCTTTCTCAACAGTT+TGG - chr4_1:76034834-76034853 None:intergenic 35.0%
! AGTGATAATTGGGTTGCAAA+CGG - chr4_1:76034884-76034903 None:intergenic 35.0%
GGTAAACAGCAGTGATAATT+GGG - chr4_1:76034894-76034913 None:intergenic 35.0%
TGGTAAACAGCAGTGATAAT+TGG - chr4_1:76034895-76034914 None:intergenic 35.0%
ATGAGAATTAGTAGGTCAAG+CGG + chr4_1:76035046-76035065 Msa0573010:three_prime_UTR 35.0%
TTACAGCTTTCTGTACTGTT+TGG + chr4_1:76035199-76035218 Msa0573010:three_prime_UTR 35.0%
!! GTTAGGACAGTTTTAGCCAA+TGG - chr4_1:76031480-76031499 None:intergenic 40.0%
! ACATGTCATTGGTGATTACG+TGG - chr4_1:76031519-76031538 None:intergenic 40.0%
! TAAAAAGCGCAGAGTAACAC+TGG + chr4_1:76031561-76031580 Msa0573010:five_prime_UTR 40.0%
TGATACATCTCACAACACCA+TGG + chr4_1:76031629-76031648 Msa0573010:exon 40.0%
TGGGATGTGATTACATGGTT+TGG + chr4_1:76032297-76032316 Msa0573010:intron 40.0%
AATAACAGTCCCTAACTTGG+TGG - chr4_1:76032424-76032443 None:intergenic 40.0%
ACCAAGTTAGGGACTGTTAT+TGG + chr4_1:76032423-76032442 Msa0573010:CDS 40.0%
CCAAGTTAGGGACTGTTATT+GGG + chr4_1:76032424-76032443 Msa0573010:CDS 40.0%
ATGGTGTGATACGATTTCCT+TGG - chr4_1:76032521-76032540 None:intergenic 40.0%
GAAATCGTATCACACCATCA+TGG + chr4_1:76032523-76032542 Msa0573010:CDS 40.0%
CATCAAAGATGGTCCTTTCA+GGG - chr4_1:76032611-76032630 None:intergenic 40.0%
ACATCAAAGATGGTCCTTTC+AGG - chr4_1:76032612-76032631 None:intergenic 40.0%
GGATGGAAAACCATACATTC+AGG + chr4_1:76032813-76032832 Msa0573010:CDS 40.0%
ATTCAGGTCAGAGTAAAGGA+TGG + chr4_1:76032829-76032848 Msa0573010:CDS 40.0%
TGTAATTCGCCAATTCACCT+GGG - chr4_1:76032966-76032985 None:intergenic 40.0%
TTGTAATTCGCCAATTCACC+TGG - chr4_1:76032967-76032986 None:intergenic 40.0%
CTTACTTCAATGATGCTCAG+AGG + chr4_1:76033068-76033087 Msa0573010:CDS 40.0%
CTTGTCCAATCCATAAGCAA+TGG - chr4_1:76033167-76033186 None:intergenic 40.0%
!! GCTTATGGATTGGACAAGAA+AGG + chr4_1:76033169-76033188 Msa0573010:CDS 40.0%
!! TATGGATTGGACAAGAAAGG+TGG + chr4_1:76033172-76033191 Msa0573010:CDS 40.0%
TAAGTACTCACCTCCAAGAT+GGG - chr4_1:76033302-76033321 None:intergenic 40.0%
ATAAGTACTCACCTCCAAGA+TGG - chr4_1:76033303-76033322 None:intergenic 40.0%
CTTCAATTGTTTACCAGGTG+AGG + chr4_1:76033413-76033432 Msa0573010:intron 40.0%
GCATAGCAAGGATATTAGCA+AGG + chr4_1:76033485-76033504 Msa0573010:CDS 40.0%
TCAACTCTTCAAATCGAGCA+CGG - chr4_1:76033638-76033657 None:intergenic 40.0%
GATGAGATTGTTCTTGTTGG+TGG + chr4_1:76033735-76033754 Msa0573010:CDS 40.0%
TGATGGAAAGGAACCAAACA+AGG + chr4_1:76033803-76033822 Msa0573010:CDS 40.0%
GATGGAAAGGAACCAAACAA+GGG + chr4_1:76033804-76033823 Msa0573010:CDS 40.0%
ATGGAAAGGAACCAAACAAG+GGG + chr4_1:76033805-76033824 Msa0573010:CDS 40.0%
!!! TGCAAGGAAGCATTTTGAGT+GGG + chr4_1:76033865-76033884 Msa0573010:CDS 40.0%
GTATCCAGATATCCTTCTCT+TGG + chr4_1:76034022-76034041 Msa0573010:intron 40.0%
ACATCCAAGAGAAGGATATC+TGG - chr4_1:76034029-76034048 None:intergenic 40.0%
GTTTCAATTCCAAGGGTAAG+AGG - chr4_1:76034056-76034075 None:intergenic 40.0%
ACCCTTGGAATTGAAACTGT+TGG + chr4_1:76034059-76034078 Msa0573010:CDS 40.0%
CTCCAACAGTTTCAATTCCA+AGG - chr4_1:76034064-76034083 None:intergenic 40.0%
CTTGGAATTGAAACTGTTGG+AGG + chr4_1:76034062-76034081 Msa0573010:CDS 40.0%
!!! AACACCTGGGATTTTTTGGT+GGG - chr4_1:76034125-76034144 None:intergenic 40.0%
!!! AAACACCTGGGATTTTTTGG+TGG - chr4_1:76034126-76034145 None:intergenic 40.0%
!!! GGTAAACACCTGGGATTTTT+TGG - chr4_1:76034129-76034148 None:intergenic 40.0%
! AAACAGTTGTTTGCTGATCC+TGG - chr4_1:76034157-76034176 None:intergenic 40.0%
AATGTCCTAGCAATATGCAG+TGG - chr4_1:76034204-76034223 None:intergenic 40.0%
AATAGGTGTTTGAAGGTGAG+AGG + chr4_1:76034295-76034314 Msa0573010:intron 40.0%
AATCAAAGTTCCCGAGAAGA+CGG - chr4_1:76034338-76034357 None:intergenic 40.0%
ACCGTTTGCATCTACTTCAA+AGG - chr4_1:76034509-76034528 None:intergenic 40.0%
AAATGTTAGGGCAGAAGACA+AGG + chr4_1:76034534-76034553 Msa0573010:CDS 40.0%
AATGTTAGGGCAGAAGACAA+GGG + chr4_1:76034535-76034554 Msa0573010:CDS 40.0%
! GCGTCCCTTTTCATTTGTAA+TGG - chr4_1:76034584-76034603 None:intergenic 40.0%
CTTCACTTTCTTGTCTTCCT+CGG - chr4_1:76034656-76034675 None:intergenic 40.0%
! GTTTGTCCTTGTCACTGATT+TGG - chr4_1:76034732-76034751 None:intergenic 40.0%
CCATTCAAGTGCTTCTTTCA+CGG - chr4_1:76034800-76034819 None:intergenic 40.0%
! TTATCACTGCTGTTTACCAG+AGG + chr4_1:76034896-76034915 Msa0573010:CDS 40.0%
!! TCTAGCTCTACTTCAGAAGT+GGG - chr4_1:76035022-76035041 None:intergenic 40.0%
!! TTCTAGCTCTACTTCAGAAG+TGG - chr4_1:76035023-76035042 None:intergenic 40.0%
!!! TGCTTGTTTTGTGACTTTCC+CGG + chr4_1:76035247-76035266 Msa0573010:three_prime_UTR 40.0%
GCAGTAGAGCGACTTACAAA+GGG + chr4_1:76031422-76031441 Msa0573010:five_prime_UTR 45.0%
GACATGTTCCTACACACAAG+AGG + chr4_1:76031449-76031468 Msa0573010:five_prime_UTR 45.0%
CTTCTCACCATCATCTCCTT+AGG + chr4_1:76031681-76031700 Msa0573010:CDS 45.0%
TGCAACATCTGCTGCAAAAG+AGG + chr4_1:76032392-76032411 Msa0573010:CDS 45.0%
ACATCTGCTGCAAAAGAGGA+AGG + chr4_1:76032396-76032415 Msa0573010:CDS 45.0%
CATCTGCTGCAAAAGAGGAA+GGG + chr4_1:76032397-76032416 Msa0573010:CDS 45.0%
CCCAATAACAGTCCCTAACT+TGG - chr4_1:76032427-76032446 None:intergenic 45.0%
GAAATCATAGCCAACGACCA+AGG + chr4_1:76032501-76032520 Msa0573010:CDS 45.0%
GATACGATTTCCTTGGTCGT+TGG - chr4_1:76032514-76032533 None:intergenic 45.0%
TCGGTGAAAGAAACCCATGA+TGG - chr4_1:76032540-76032559 None:intergenic 45.0%
ACCGACGATGAGAGATTGAT+TGG + chr4_1:76032555-76032574 Msa0573010:CDS 45.0%
CCCAATCAATCTCTCATCGT+CGG - chr4_1:76032559-76032578 None:intergenic 45.0%
CCGACGATGAGAGATTGATT+GGG + chr4_1:76032556-76032575 Msa0573010:CDS 45.0%
CGACGATGAGAGATTGATTG+GGG + chr4_1:76032557-76032576 Msa0573010:CDS 45.0%
AGTAAAGGATGGTGAGACCA+AGG + chr4_1:76032840-76032859 Msa0573010:CDS 45.0%
! CATCACGAATAGTCTTGCCA+AGG - chr4_1:76032930-76032949 None:intergenic 45.0%
GTTCAAACCAGCAATGACAC+CGG - chr4_1:76033110-76033129 None:intergenic 45.0%
!! TGTCATTGCTGGTTTGAACG+TGG + chr4_1:76033111-76033130 Msa0573010:CDS 45.0%
TGCTGCCATTGCTTATGGAT+TGG + chr4_1:76033159-76033178 Msa0573010:CDS 45.0%
CTTGTCTTTGATCTTGGAGG+TGG + chr4_1:76033208-76033227 Msa0573010:CDS 45.0%
ACAAACGGAGATACCCATCT+TGG + chr4_1:76033286-76033305 Msa0573010:CDS 45.0%
ACTCAATTTCCACACGGACT+TGG - chr4_1:76033578-76033597 None:intergenic 45.0%
CAACTCTTCAAATCGAGCAC+GGG - chr4_1:76033637-76033656 None:intergenic 45.0%
!! TGACTTGTTCCGGAAGACAA+TGG + chr4_1:76033662-76033681 Msa0573010:CDS 45.0%
! GACTTGTTCCGGAAGACAAT+GGG + chr4_1:76033663-76033682 Msa0573010:CDS 45.0%
! TTCTTGTTGGTGGAAGCACA+AGG + chr4_1:76033745-76033764 Msa0573010:CDS 45.0%
! TGGAAGCACAAGGATTCCAA+AGG + chr4_1:76033755-76033774 Msa0573010:CDS 45.0%
TGGAAAGGAACCAAACAAGG+GGG + chr4_1:76033806-76033825 Msa0573010:CDS 45.0%
CAAAGGCAACTGCTTCATCA+GGG - chr4_1:76033836-76033855 None:intergenic 45.0%
!!! GTGCAAGGAAGCATTTTGAG+TGG + chr4_1:76033864-76033883 Msa0573010:CDS 45.0%
!!! GCAAGGAAGCATTTTGAGTG+GGG + chr4_1:76033866-76033885 Msa0573010:CDS 45.0%
GAGGGTGGTGAAGAAACTAA+AGG + chr4_1:76033888-76033907 Msa0573010:CDS 45.0%
!!! ACACCTGGGATTTTTTGGTG+GGG - chr4_1:76034124-76034143 None:intergenic 45.0%
! AGTTGTTTGCTGATCCTGGT+AGG - chr4_1:76034153-76034172 None:intergenic 45.0%
ACAAAGGATTGCCGTCTTCT+CGG + chr4_1:76034324-76034343 Msa0573010:CDS 45.0%
!! CTCGGGAACTTTGATTTGTC+TGG + chr4_1:76034342-76034361 Msa0573010:CDS 45.0%
AAACAAACCTTGGAGCTGGT+GGG - chr4_1:76034371-76034390 None:intergenic 45.0%
AAAACAAACCTTGGAGCTGG+TGG - chr4_1:76034372-76034391 None:intergenic 45.0%
CACAAAACAAACCTTGGAGC+TGG - chr4_1:76034375-76034394 None:intergenic 45.0%
CGAGGAAGACAAGAAAGTGA+AGG + chr4_1:76034654-76034673 Msa0573010:CDS 45.0%
!! GGACAAACTTGCTGACAAGT+TGG + chr4_1:76034744-76034763 Msa0573010:CDS 45.0%
!! CCGTGAAAGAAGCACTTGAA+TGG + chr4_1:76034797-76034816 Msa0573010:CDS 45.0%
!! GAAAGAAGCACTTGAATGGC+TGG + chr4_1:76034801-76034820 Msa0573010:CDS 45.0%
!!! GCTTGTTTTGTGACTTTCCC+GGG + chr4_1:76035248-76035267 Msa0573010:three_prime_UTR 45.0%
CGCAGTAGAGCGACTTACAA+AGG + chr4_1:76031421-76031440 Msa0573010:five_prime_UTR 50.0%
TGGGATTGCCTCTTGTGTGT+AGG - chr4_1:76031460-76031479 None:intergenic 50.0%
CACACAAGAGGCAATCCCAT+TGG + chr4_1:76031461-76031480 Msa0573010:five_prime_UTR 50.0%
ATGGCTCGCTCTTCTTCTTG+CGG + chr4_1:76031648-76031667 Msa0573010:CDS 50.0%
AGGAAGGGACCACCAAGTTA+GGG + chr4_1:76032412-76032431 Msa0573010:CDS 50.0%
CGATGAGAGATTGATTGGGG+AGG + chr4_1:76032560-76032579 Msa0573010:CDS 50.0%
!! TCATGGCACTGACTTCCTCA+GGG - chr4_1:76032873-76032892 None:intergenic 50.0%
!! ATCATGGCACTGACTTCCTC+AGG - chr4_1:76032874-76032893 None:intergenic 50.0%
! GAAACCGCTGAAGCATTCCT+TGG + chr4_1:76032910-76032929 Msa0573010:CDS 50.0%
CTTGCCAAGGAATGCTTCAG+CGG - chr4_1:76032917-76032936 None:intergenic 50.0%
CAAGACTATTCGTGATGCCG+TGG + chr4_1:76032933-76032952 Msa0573010:CDS 50.0%
CTTCAATGATGCTCAGAGGC+AGG + chr4_1:76033072-76033091 Msa0573010:CDS 50.0%
TCCATAAGCAATGGCAGCAG+CGG - chr4_1:76033158-76033177 None:intergenic 50.0%
AACGGAGATACCCATCTTGG+AGG + chr4_1:76033289-76033308 Msa0573010:CDS 50.0%
CTCTGATCAAAGTCCTCACC+TGG - chr4_1:76033429-76033448 None:intergenic 50.0%
! AGCAAGGACAACAGAGCACT+TGG + chr4_1:76033501-76033520 Msa0573010:CDS 50.0%
! ACAGAGCACTTGGAAAGCTG+AGG + chr4_1:76033511-76033530 Msa0573010:CDS 50.0%
AGCACTTGGAAAGCTGAGGA+GGG + chr4_1:76033515-76033534 Msa0573010:CDS 50.0%
CTGGCTACTAAGAGCTCTCT+TGG - chr4_1:76033553-76033572 None:intergenic 50.0%
TCAAATCGAGCACGGGTAAG+TGG - chr4_1:76033630-76033649 None:intergenic 50.0%
TCACAGGTCCCATTGTCTTC+CGG - chr4_1:76033674-76033693 None:intergenic 50.0%
GACAATGGGACCTGTGAAGA+AGG + chr4_1:76033677-76033696 Msa0573010:CDS 50.0%
TCGTCCATTGCCTTCTTCAC+AGG - chr4_1:76033690-76033709 None:intergenic 50.0%
AAGAAGGCAATGGACGATGC+TGG + chr4_1:76033693-76033712 Msa0573010:CDS 50.0%
CCAAAGGCAACTGCTTCATC+AGG - chr4_1:76033837-76033856 None:intergenic 50.0%
CCTGATGAAGCAGTTGCCTT+TGG + chr4_1:76033834-76033853 Msa0573010:CDS 50.0%
!!! AGGAAGCATTTTGAGTGGGG+AGG + chr4_1:76033869-76033888 Msa0573010:CDS 50.0%
!!! GGAAGCATTTTGAGTGGGGA+GGG + chr4_1:76033870-76033889 Msa0573010:CDS 50.0%
GAGGTGCAACATCCAAGAGA+AGG - chr4_1:76034037-76034056 None:intergenic 50.0%
GATGTTGCACCTCTTACCCT+TGG + chr4_1:76034044-76034063 Msa0573010:CDS 50.0%
GTGGGGATGACAGTGTTTCT+AGG - chr4_1:76034107-76034126 None:intergenic 50.0%
CATCCCCACCAAAAAATCCC+AGG + chr4_1:76034118-76034137 Msa0573010:CDS 50.0%
CTGGTAGGTGGTAAACACCT+GGG - chr4_1:76034138-76034157 None:intergenic 50.0%
! TGTTTGCTGATCCTGGTAGG+TGG - chr4_1:76034150-76034169 None:intergenic 50.0%
!! TGAGGGGTGTTGTACTCAAC+CGG + chr4_1:76034250-76034269 Msa0573010:intron 50.0%
AGGTGAGAGGAGTCTCACAA+AGG + chr4_1:76034308-76034327 Msa0573010:CDS 50.0%
CAAAGGATTGCCGTCTTCTC+GGG + chr4_1:76034325-76034344 Msa0573010:CDS 50.0%
! ACTGCTGTTTACCAGAGGTC+AGG + chr4_1:76034901-76034920 Msa0573010:CDS 50.0%
GCGTTTATGCAGAGAACCGT+AGG + chr4_1:76035270-76035289 Msa0573010:three_prime_UTR 50.0%
GCAAGAAGAAGAGCGAGCCA+TGG - chr4_1:76031649-76031668 None:intergenic 55.0%
TGGCTCGCTCTTCTTCTTGC+GGG + chr4_1:76031649-76031668 Msa0573010:CDS 55.0%
GAGGAAGGGACCACCAAGTT+AGG + chr4_1:76032411-76032430 Msa0573010:CDS 55.0%
TGGCAGCTGTCAACCCTGAA+AGG + chr4_1:76032595-76032614 Msa0573010:CDS 55.0%
TTCCTCAGGGCTGAACACCT+TGG - chr4_1:76032860-76032879 None:intergenic 55.0%
TTCACCTGGGACAGTGACCA+CGG - chr4_1:76032953-76032972 None:intergenic 55.0%
GGTCACTGTCCCAGGTGAAT+TGG + chr4_1:76032954-76032973 Msa0573010:intron 55.0%
AATGACACCGGCATCCTTGG+TGG - chr4_1:76033098-76033117 None:intergenic 55.0%
AGCAATGACACCGGCATCCT+TGG - chr4_1:76033101-76033120 None:intergenic 55.0%
!! AAGGATGCCGGTGTCATTGC+TGG + chr4_1:76033100-76033119 Msa0573010:CDS 55.0%
TAAGCAATGGCAGCAGCGGT+GGG - chr4_1:76033154-76033173 None:intergenic 55.0%
ATAAGCAATGGCAGCAGCGG+TGG - chr4_1:76033155-76033174 None:intergenic 55.0%
ACCGCTGCTGCCATTGCTTA+TGG + chr4_1:76033154-76033173 Msa0573010:CDS 55.0%
GAGCACTTGGAAAGCTGAGG+AGG + chr4_1:76033514-76033533 Msa0573010:CDS 55.0%
!! TTTCCACACGGACTTGGTGC+TGG - chr4_1:76033572-76033591 None:intergenic 55.0%
GGGACCTGTGAAGAAGGCAA+TGG + chr4_1:76033683-76033702 Msa0573010:CDS 55.0%
TCAGGGTTGACCCCCTTGTT+TGG - chr4_1:76033819-76033838 None:intergenic 55.0%
TCCTTGCACTGCAGCACCAA+AGG - chr4_1:76033853-76033872 None:intergenic 55.0%
!! AGCATTTTGAGTGGGGAGGG+TGG + chr4_1:76033873-76033892 Msa0573010:CDS 55.0%
CCTGGTAGGTGGTAAACACC+TGG - chr4_1:76034139-76034158 None:intergenic 55.0%
CCAGGTGTTTACCACCTACC+AGG + chr4_1:76034136-76034155 Msa0573010:CDS 55.0%
!! GAGGGGTGTTGTACTCAACC+GGG + chr4_1:76034251-76034270 Msa0573010:intron 55.0%
!! AGGGGTGTTGTACTCAACCG+GGG + chr4_1:76034252-76034271 Msa0573010:intron 55.0%
TGAGCCAGGAGGAGATTGAC+CGG + chr4_1:76034605-76034624 Msa0573010:CDS 55.0%
GTCTTCCTCGGCAAACTCCT+CGG - chr4_1:76034644-76034663 None:intergenic 55.0%
GCTGTTTACCAGAGGTCAGG+TGG + chr4_1:76034904-76034923 Msa0573010:CDS 55.0%
GGTTCTCTGCATAAACGCCC+GGG - chr4_1:76035268-76035287 None:intergenic 55.0%
CGGTTCTCTGCATAAACGCC+CGG - chr4_1:76035269-76035288 None:intergenic 55.0%
TGGGGAGGCTGCGAAGAATC+TGG + chr4_1:76032575-76032594 Msa0573010:CDS 60.0%
! GACCAAGGTGTTCAGCCCTG+AGG + chr4_1:76032855-76032874 Msa0573010:CDS 60.0%
TAGCCAGCACCAAGTCCGTG+TGG + chr4_1:76033566-76033585 Msa0573010:CDS 60.0%
!! GCCTTTGGTGCTGCAGTGCA+AGG + chr4_1:76033849-76033868 Msa0573010:CDS 60.0%
CTGGAATCCCACCAGCTCCA+AGG + chr4_1:76034361-76034380 Msa0573010:CDS 60.0%
! AGGGCAGAAGACAAGGGCAC+AGG + chr4_1:76034541-76034560 Msa0573010:CDS 60.0%
TGAAAAGGGACGCCTGAGCC+AGG + chr4_1:76034591-76034610 Msa0573010:CDS 60.0%
GGTCAATCTCCTCCTGGCTC+AGG - chr4_1:76034606-76034625 None:intergenic 60.0%
CCATCCGGTCAATCTCCTCC+TGG - chr4_1:76034612-76034631 None:intergenic 60.0%
CCAGGAGGAGATTGACCGGA+TGG + chr4_1:76034609-76034628 Msa0573010:CDS 60.0%
CCTCGGCTTCACGAACCATC+CGG - chr4_1:76034627-76034646 None:intergenic 60.0%
TGAAGCCGAGGAGTTTGCCG+AGG + chr4_1:76034636-76034655 Msa0573010:CDS 60.0%
GAGCTCCAGGTGGTGCATCA+GGG + chr4_1:76034926-76034945 Msa0573010:CDS 60.0%
AGCTCCAGGTGGTGCATCAG+GGG + chr4_1:76034927-76034946 Msa0573010:CDS 60.0%
TGGTGCATCAGGGGAAGGAG+AGG + chr4_1:76034936-76034955 Msa0573010:CDS 60.0%
GATGCCGTGGTCACTGTCCC+AGG + chr4_1:76032946-76032965 Msa0573010:CDS 65.0%
TGCTCAGAGGCAGGCCACCA+AGG + chr4_1:76033081-76033100 Msa0573010:CDS 65.0%
AGGCAGGCCACCAAGGATGC+CGG + chr4_1:76033088-76033107 Msa0573010:CDS 65.0%
AAAGGGACGCCTGAGCCAGG+AGG + chr4_1:76034594-76034613 Msa0573010:CDS 65.0%
CCGGATGGTTCGTGAAGCCG+AGG + chr4_1:76034624-76034643 Msa0573010:CDS 65.0%
CTGGAGCTCCACCTGACCTC+TGG - chr4_1:76034915-76034934 None:intergenic 65.0%
CAGAGGTCAGGTGGAGCTCC+AGG + chr4_1:76034913-76034932 Msa0573010:CDS 65.0%
AGGTCAGGTGGAGCTCCAGG+TGG + chr4_1:76034916-76034935 Msa0573010:CDS 65.0%
GGAGCTCCAGGTGGTGCATC+AGG + chr4_1:76034925-76034944 Msa0573010:CDS 65.0%
CCTTCCCCTGATGCACCACC+TGG - chr4_1:76034934-76034953 None:intergenic 65.0%
CCAGGTGGTGCATCAGGGGA+AGG + chr4_1:76034931-76034950 Msa0573010:CDS 65.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 76031408 76035385 76031408 ID=Msa0573010;Name=Msa0573010
chr4_1 mRNA 76031408 76035385 76031408 ID=Msa0573010-mRNA-1;Parent=Msa0573010;Name=Msa0573010-mRNA-1;_AED=0.04;_eAED=0.04;_QI=240|1|1|1|1|1|8|395|669
chr4_1 exon 76031408 76031702 76031408 ID=Msa0573010-mRNA-1:exon:26401;Parent=Msa0573010-mRNA-1
chr4_1 exon 76032382 76032652 76032382 ID=Msa0573010-mRNA-1:exon:26402;Parent=Msa0573010-mRNA-1
chr4_1 exon 76032753 76032967 76032753 ID=Msa0573010-mRNA-1:exon:26403;Parent=Msa0573010-mRNA-1
chr4_1 exon 76033068 76033310 76033068 ID=Msa0573010-mRNA-1:exon:26404;Parent=Msa0573010-mRNA-1
chr4_1 exon 76033430 76033909 76033430 ID=Msa0573010-mRNA-1:exon:26405;Parent=Msa0573010-mRNA-1
chr4_1 exon 76034030 76034184 76034030 ID=Msa0573010-mRNA-1:exon:26406;Parent=Msa0573010-mRNA-1
chr4_1 exon 76034300 76034382 76034300 ID=Msa0573010-mRNA-1:exon:26407;Parent=Msa0573010-mRNA-1
chr4_1 exon 76034483 76035385 76034483 ID=Msa0573010-mRNA-1:exon:26408;Parent=Msa0573010-mRNA-1
chr4_1 five_prime_UTR 76031408 76031647 76031408 ID=Msa0573010-mRNA-1:five_prime_utr;Parent=Msa0573010-mRNA-1
chr4_1 CDS 76031648 76031702 76031648 ID=Msa0573010-mRNA-1:cds;Parent=Msa0573010-mRNA-1
chr4_1 CDS 76032382 76032652 76032382 ID=Msa0573010-mRNA-1:cds;Parent=Msa0573010-mRNA-1
chr4_1 CDS 76032753 76032967 76032753 ID=Msa0573010-mRNA-1:cds;Parent=Msa0573010-mRNA-1
chr4_1 CDS 76033068 76033310 76033068 ID=Msa0573010-mRNA-1:cds;Parent=Msa0573010-mRNA-1
chr4_1 CDS 76033430 76033909 76033430 ID=Msa0573010-mRNA-1:cds;Parent=Msa0573010-mRNA-1
chr4_1 CDS 76034030 76034184 76034030 ID=Msa0573010-mRNA-1:cds;Parent=Msa0573010-mRNA-1
chr4_1 CDS 76034300 76034382 76034300 ID=Msa0573010-mRNA-1:cds;Parent=Msa0573010-mRNA-1
chr4_1 CDS 76034483 76034990 76034483 ID=Msa0573010-mRNA-1:cds;Parent=Msa0573010-mRNA-1
chr4_1 three_prime_UTR 76034991 76035385 76034991 ID=Msa0573010-mRNA-1:three_prime_utr;Parent=Msa0573010-mRNA-1
Gene Sequence

>Msa0573010

ATGGCTCGCTCTTCTTCTTGCGGGTCTCTGTTTCTTCTCACCATCATCTCCTTAGGATGTCTATTTGCAACATCTGCTGCAAAAGAGGAAGGGACCACCAAGTTAGGGACTGTTATTGGGATAGATCTTGGAACAACATATTCATGTGTTGGTGTTTACAAGAACGGACATGTTGAAATCATAGCCAACGACCAAGGAAATCGTATCACACCATCATGGGTTTCTTTCACCGACGATGAGAGATTGATTGGGGAGGCTGCGAAGAATCTGGCAGCTGTCAACCCTGAAAGGACCATCTTTGATGTCAAGAGACTTATCGGAAGAAAATTTGAGGATAAGGAAGTTCAAAGAGACATGAAGCTTGTTCCTTACAAGATTGTCAACAAGGATGGAAAACCATACATTCAGGTCAGAGTAAAGGATGGTGAGACCAAGGTGTTCAGCCCTGAGGAAGTCAGTGCCATGATTCTGACTAAGATGAAGGAAACCGCTGAAGCATTCCTTGGCAAGACTATTCGTGATGCCGTGGTCACTGTCCCAGCTTACTTCAATGATGCTCAGAGGCAGGCCACCAAGGATGCCGGTGTCATTGCTGGTTTGAACGTGGCTAGAATCATTAATGAACCCACCGCTGCTGCCATTGCTTATGGATTGGACAAGAAAGGTGGAGAGAAGAACATTCTTGTCTTTGATCTTGGAGGTGGAACTTTTGATGTCAGTATCTTGACAATTGACAATGGTGTTTTTGAGGTTCTTTCTACAAACGGAGATACCCATCTTGGAGGTGAGGACTTTGATCAGAGAATAATGGAGTACTTCATTAAATTGATCAAGAAAAAGCATAGCAAGGATATTAGCAAGGACAACAGAGCACTTGGAAAGCTGAGGAGGGAGAGTGAGCGTGCCAAGAGAGCTCTTAGTAGCCAGCACCAAGTCCGTGTGGAAATTGAGTCACTTTTTGATGGCGTTGATTTCTCTGAGCCACTTACCCGTGCTCGATTTGAAGAGTTGAACAATGACTTGTTCCGGAAGACAATGGGACCTGTGAAGAAGGCAATGGACGATGCTGGATTACAGAAGAATCAAATTGATGAGATTGTTCTTGTTGGTGGAAGCACAAGGATTCCAAAGGTACAACAACTTTTGAAGGATTACTTTGATGGAAAGGAACCAAACAAGGGGGTCAACCCTGATGAAGCAGTTGCCTTTGGTGCTGCAGTGCAAGGAAGCATTTTGAGTGGGGAGGGTGGTGAAGAAACTAAAGATATCCTTCTCTTGGATGTTGCACCTCTTACCCTTGGAATTGAAACTGTTGGAGGAGTGATGACAAAGTTGATTCCTAGAAACACTGTCATCCCCACCAAAAAATCCCAGGTGTTTACCACCTACCAGGATCAGCAAACAACTGTTTCTATTCAGGTGTTTGAAGGTGAGAGGAGTCTCACAAAGGATTGCCGTCTTCTCGGGAACTTTGATTTGTCTGGAATCCCACCAGCTCCAAGAGGTACCCCTCAAATTGAAGTGACCTTTGAAGTAGATGCAAACGGTATTCTAAATGTTAGGGCAGAAGACAAGGGCACAGGTAAATCAGAAAAGATCACCATTACAAATGAAAAGGGACGCCTGAGCCAGGAGGAGATTGACCGGATGGTTCGTGAAGCCGAGGAGTTTGCCGAGGAAGACAAGAAAGTGAAGGAAAGAATTGATGCTCGGAATGCTCTTGAAACCTATGTCTACAACATGAAAAACCAAATCAGTGACAAGGACAAACTTGCTGACAAGTTGGAATCAGATGAAAAGGAAAAAATTGAGGCTGCCGTGAAAGAAGCACTTGAATGGCTGGATGACAACCAAACTGTTGAGAAAGAAGAGTTTGAAGAGAAGCTTAAAGAAGTTGAAGCCGTTTGCAACCCAATTATCACTGCTGTTTACCAGAGGTCAGGTGGAGCTCCAGGTGGTGCATCAGGGGAAGGAGAGGATGAAGATGAAGACTCTCGCGACGAGCTCTAG
Protein sequence

>Msa0573010

MARSSSCGSLFLLTIISLGCLFATSAAKEEGTTKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVSFTDDERLIGEAAKNLAAVNPERTIFDVKRLIGRKFEDKEVQRDMKLVPYKIVNKDGKPYIQVRVKDGETKVFSPEEVSAMILTKMKETAEAFLGKTIRDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRIMEYFIKLIKKKHSKDISKDNRALGKLRRESERAKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNNDLFRKTMGPVKKAMDDAGLQKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAFGAAVQGSILSGEGGEETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGNFDLSGIPPAPRGTPQIEVTFEVDANGILNVRAEDKGTGKSEKITITNEKGRLSQEEIDRMVREAEEFAEEDKKVKERIDARNALETYVYNMKNQISDKDKLADKLESDEKEKIEAAVKEALEWLDDNQTVEKEEFEEKLKEVEAVCNPIITAVYQRSGGAPGGASGEGEDEDEDSRDEL*