Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0455380 | XP_013460046.1 | 82.921 | 849 | 58 | 8 | 1 | 819 | 1 | 792 | 0.0 | 1005 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0455380 | sp|Q9SUA1|DEKP3_ARATH | 49.395 | 496 | 203 | 16 | 264 | 731 | 236 | 711 | 4.30e-93 | 312 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0455380 | A0A072UWT2 | 82.921 | 849 | 58 | 8 | 1 | 819 | 1 | 792 | 0.0 | 1005 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0053240 | Msa0455380 | 0.816351 | 5.782725e-52 | -8.615850e-47 |
| Msa0199570 | Msa0455380 | 0.819683 | 1.021023e-52 | -8.615850e-47 |
| Msa0455380 | Msa0687230 | 0.848526 | 5.794773e-60 | -8.615850e-47 |
| Msa0455380 | Msa0699190 | 0.819393 | 1.189267e-52 | -8.615850e-47 |
| Msa0455380 | Msa0707390 | 0.812347 | 4.438421e-51 | -8.615850e-47 |
| Msa0455380 | Msa0782070 | -0.828020 | 1.134059e-54 | -8.615850e-47 |
| Msa0455380 | Msa0832820 | 0.804724 | 1.883172e-49 | -8.615850e-47 |
| Msa0455380 | Msa0897400 | 0.805408 | 1.354032e-49 | -8.615850e-47 |
| Msa0455380 | Msa0963020 | 0.813841 | 2.086315e-51 | -8.615850e-47 |
| Msa0455380 | Msa0979810 | 0.812016 | 5.241913e-51 | -8.615850e-47 |
| Msa0455380 | Msa1025940 | 0.814115 | 1.815619e-51 | -8.615850e-47 |
| Msa0455380 | Msa1063700 | 0.805855 | 1.091454e-49 | -8.615850e-47 |
| Msa0455380 | Msa1184370 | 0.810952 | 8.925641e-51 | -8.615850e-47 |
| Msa0455380 | Msa1253400 | 0.804597 | 2.001697e-49 | -8.615850e-47 |
| Msa0455380 | Msa1294840 | 0.810592 | 1.067408e-50 | -8.615850e-47 |
| Msa0455380 | Msa1397940 | 0.800270 | 1.559499e-48 | -8.615850e-47 |
| Msa0259160 | Msa0455380 | 0.808972 | 2.381397e-50 | -8.615850e-47 |
| Msa0319330 | Msa0455380 | 0.815682 | 8.158043e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0455380 | MtrunA17_Chr3g0102341 | 82.921 | 849 | 58 | 8 | 1 | 819 | 1 | 792 | 0.0 | 1005 |
| Msa0455380 | MtrunA17_Chr5g0446481 | 43.658 | 749 | 334 | 18 | 1 | 681 | 1 | 729 | 1.35e-111 | 363 |
| Msa0455380 | MtrunA17_Chr5g0446481 | 46.203 | 316 | 105 | 9 | 498 | 811 | 700 | 952 | 2.20e-40 | 160 |
| Msa0455380 | MtrunA17_Chr3g0132011 | 39.848 | 394 | 205 | 10 | 341 | 721 | 91 | 465 | 6.08e-61 | 216 |
| Msa0455380 | MtrunA17_Chr5g0412041 | 70.690 | 58 | 10 | 2 | 720 | 777 | 191 | 241 | 3.56e-16 | 82.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0455380 | AT4G26630.2 | 49.395 | 496 | 203 | 16 | 264 | 731 | 236 | 711 | 4.37e-94 | 312 |
| Msa0455380 | AT4G26630.1 | 49.395 | 496 | 203 | 16 | 264 | 731 | 236 | 711 | 4.37e-94 | 312 |
| Msa0455380 | AT5G55660.1 | 45.098 | 510 | 201 | 12 | 316 | 810 | 297 | 742 | 1.22e-93 | 311 |
| Msa0455380 | AT3G48710.1 | 39.062 | 384 | 196 | 11 | 341 | 717 | 53 | 405 | 3.54e-54 | 195 |
| Msa0455380 | AT5G63550.1 | 52.880 | 191 | 84 | 4 | 343 | 529 | 95 | 283 | 3.19e-52 | 191 |
| Msa0455380 | AT5G63550.2 | 52.604 | 192 | 84 | 5 | 343 | 529 | 95 | 284 | 9.40e-51 | 187 |
Find 217 sgRNAs with CRISPR-Local
Find 667 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTAAGCTGACGGACTTTC+TGG | 0.131548 | 3_3:-48261033 | Msa0455380:CDS |
| CTTTGAAGTTGACACCTTTC+TGG | 0.140247 | 3_3:-48256568 | Msa0455380:three_prime_UTR |
| TGTCATCCTCTTCAATTTCT+TGG | 0.157628 | 3_3:+48264185 | None:intergenic |
| TAATCCTTTGCAGGCATTTC+AGG | 0.196207 | 3_3:-48261929 | Msa0455380:intron |
| AGTAGAAAACTTACAGATTC+AGG | 0.231849 | 3_3:+48265650 | None:intergenic |
| TTTCTTTGCAGATGATGTTT+TGG | 0.244492 | 3_3:+48258772 | None:intergenic |
| AAACTTACAGATTCAGGATT+TGG | 0.265584 | 3_3:+48265656 | None:intergenic |
| CGATCACTAGTTGGAGTCTT+TGG | 0.269151 | 3_3:+48263761 | None:intergenic |
| GGAAGAAGTAAAAGAGAATA+AGG | 0.282929 | 3_3:-48264329 | Msa0455380:CDS |
| GGTGGAAAAGAATGATAATA+AGG | 0.283345 | 3_3:-48264281 | Msa0455380:CDS |
| TTTGCGAATGGTTTCTCTAA+TGG | 0.296370 | 3_3:+48257796 | None:intergenic |
| TTGGTATTTGATGATTTCTT+AGG | 0.302048 | 3_3:+48258674 | None:intergenic |
| GATTTCTTAGGTGCTCTCTT+AGG | 0.310357 | 3_3:+48258686 | None:intergenic |
| CATAATTTAGTGCAGCCTTT+TGG | 0.323313 | 3_3:-48256695 | Msa0455380:three_prime_UTR |
| AAGGAAATCAGTTGAGAGAT+TGG | 0.324108 | 3_3:-48263726 | Msa0455380:CDS |
| ACCAAAGTCCGATGATGATA+TGG | 0.325065 | 3_3:-48258651 | Msa0455380:CDS |
| ATTGATAATTTCTTATTGTT+AGG | 0.336844 | 3_3:-48256541 | Msa0455380:three_prime_UTR |
| GCAAGTACTTCAAGAGGTTC+TGG | 0.344507 | 3_3:-48260792 | Msa0455380:CDS |
| TGCCAGAGGGAAGGTTAATA+AGG | 0.355063 | 3_3:-48263825 | Msa0455380:CDS |
| TTCTTCCTAGAAAATACCTT+TGG | 0.355080 | 3_3:+48258620 | None:intergenic |
| GAAGGAAGAGGGCGATGAAA+AGG | 0.357929 | 3_3:-48263960 | Msa0455380:CDS |
| CTGATTTCCTTTCTCGGACT+GGG | 0.364368 | 3_3:+48263738 | None:intergenic |
| AGATCAGATGGAGGAGAGTC+AGG | 0.365575 | 3_3:-48257849 | Msa0455380:CDS |
| ACTATCATCAGTCTTCCTTC+TGG | 0.367147 | 3_3:+48262160 | None:intergenic |
| TTGTTTCATACAATCCTCTT+TGG | 0.368246 | 3_3:-48262131 | Msa0455380:CDS |
| AGACCGGTCTTCATCTTTCT+CGG | 0.371584 | 3_3:+48256896 | None:intergenic |
| AACCATTCGCAAAGATTTAG+AGG | 0.373550 | 3_3:-48257786 | Msa0455380:CDS |
| AGCGTTCCGGTGAAATCATT+AGG | 0.380910 | 3_3:-48264727 | Msa0455380:CDS |
| TCTCAACTGATTTCCTTTCT+CGG | 0.381192 | 3_3:+48263732 | None:intergenic |
| ACTGATTTCCTTTCTCGGAC+TGG | 0.388040 | 3_3:+48263737 | None:intergenic |
| TGAATCTGAGAATGAGAAAA+TGG | 0.394337 | 3_3:-48264152 | Msa0455380:CDS |
| GCGTTCCGGTGAAATCATTA+GGG | 0.399042 | 3_3:-48264726 | Msa0455380:CDS |
| TTTGAAGTTGACACCTTTCT+GGG | 0.408761 | 3_3:-48256567 | Msa0455380:three_prime_UTR |
| CTATCTGAGCAAGATCAGTA+TGG | 0.409016 | 3_3:-48264800 | Msa0455380:exon |
| ATCATCATCGGACTTTGGTT+TGG | 0.415361 | 3_3:+48258655 | None:intergenic |
| AAAGAGAATAAGGAAGTTGA+TGG | 0.418724 | 3_3:-48264319 | Msa0455380:CDS |
| AGAGGATAAGAAAGACGATA+TGG | 0.418992 | 3_3:-48264425 | Msa0455380:CDS |
| GTTTGTTGTTCTCTTCAGAT+TGG | 0.419185 | 3_3:+48256729 | None:intergenic |
| AGATGCAGAGGGTAGTATTG+AGG | 0.422005 | 3_3:-48264074 | Msa0455380:CDS |
| GTGGAAAAGAATGATAATAA+GGG | 0.425290 | 3_3:-48264280 | Msa0455380:CDS |
| CTAAGCAGAAAAGGTTACTA+AGG | 0.430405 | 3_3:-48258388 | Msa0455380:intron |
| CTAGTTGGAGTCTTTGGCTC+TGG | 0.431846 | 3_3:+48263767 | None:intergenic |
| TCAAAGTCCAAAGAGAAAAC+TGG | 0.434080 | 3_3:-48258539 | Msa0455380:intron |
| GGATGTTGATGCTGAGGTTA+AGG | 0.436639 | 3_3:-48264131 | Msa0455380:CDS |
| CTCCTTATTAACCTTCCCTC+TGG | 0.441232 | 3_3:+48263823 | None:intergenic |
| GAAGAAGATAAGAAAGTTGA+GGG | 0.441554 | 3_3:-48264607 | Msa0455380:CDS |
| AGGATAAGAAAGATGAAGAT+GGG | 0.442056 | 3_3:-48264567 | Msa0455380:CDS |
| AAAGAGGAGAAGAAAGATGA+TGG | 0.445699 | 3_3:-48264355 | Msa0455380:CDS |
| ATCCTCCTCTTCATCTTCCT+CGG | 0.445829 | 3_3:+48256920 | None:intergenic |
| TGCAGAAGATAAAGAAGAAA+AGG | 0.448273 | 3_3:-48264104 | Msa0455380:CDS |
| TTACAACGGCATCATATAGT+TGG | 0.449553 | 3_3:+48257879 | None:intergenic |
| ACAAACCTTTGTTGTTGACT+TGG | 0.451597 | 3_3:+48261549 | None:intergenic |
| TTCAAATGGAGGTAGCGTTC+CGG | 0.454980 | 3_3:-48264740 | Msa0455380:CDS |
| CTTTGCAATGTGTAATTCCT+TGG | 0.455309 | 3_3:+48263679 | None:intergenic |
| AGTCAGGTTAAAAGAGGTAG+AGG | 0.455911 | 3_3:-48257833 | Msa0455380:CDS |
| GAAAACTGAAGTAGAGGAGA+AGG | 0.456878 | 3_3:-48264026 | Msa0455380:CDS |
| TGAAGCAGAGACGGAGGAGG+AGG | 0.457761 | 3_3:-48263930 | Msa0455380:CDS |
| GGAAGAAGTAAAAGATGAGA+TGG | 0.458636 | 3_3:-48264257 | Msa0455380:CDS |
| CAATGAGTTGGATCCAAATA+CGG | 0.458977 | 3_3:-48257762 | Msa0455380:intron |
| CACATCTTCAGATTCACTCC+CGG | 0.459426 | 3_3:+48258814 | None:intergenic |
| AGCAGAGACGGAGGAGGAGG+AGG | 0.460925 | 3_3:-48263927 | Msa0455380:CDS |
| GAGGATAAGAAAGATGAAGA+TGG | 0.461328 | 3_3:-48264568 | Msa0455380:CDS |
| TCCATATCATCATCGGACTT+TGG | 0.461447 | 3_3:+48258650 | None:intergenic |
| GTGTAACAAAGAGAAGTTAC+TGG | 0.461869 | 3_3:-48261602 | Msa0455380:CDS |
| GAAAGTTGAGGGTGTGGAAA+AGG | 0.466680 | 3_3:-48264596 | Msa0455380:CDS |
| GAGGAAGACTTGGTTGGAGT+TGG | 0.468240 | 3_3:+48258560 | None:intergenic |
| GTTGTTCTCTTCAGATTGGA+TGG | 0.470961 | 3_3:+48256733 | None:intergenic |
| TAAAGAAGTTGACTTCAATA+CGG | 0.473503 | 3_3:-48258292 | Msa0455380:intron |
| CTGATCATCTGTGGGATTCG+AGG | 0.473843 | 3_3:+48258341 | None:intergenic |
| TTCTGCAAGCACCACAGTTG+TGG | 0.474230 | 3_3:+48260995 | None:intergenic |
| TTAGGTGCTCTCTTAGGTGG+TGG | 0.477724 | 3_3:+48258692 | None:intergenic |
| ACAATCAACAGTCAGGCTTA+AGG | 0.481177 | 3_3:+48256869 | None:intergenic |
| TTTCAGCTAACAAATTTGAT+GGG | 0.481416 | 3_3:-48257022 | Msa0455380:intron |
| GTTTCATCTTCAGATTTCTC+AGG | 0.481662 | 3_3:+48258872 | None:intergenic |
| GAAAAGGTTACTAAGGGAAA+AGG | 0.483043 | 3_3:-48258381 | Msa0455380:CDS |
| TTTGGACTTTGAGGAAGACT+TGG | 0.485697 | 3_3:+48258550 | None:intergenic |
| GAGGAGAGTCAGGTTAAAAG+AGG | 0.491748 | 3_3:-48257839 | Msa0455380:CDS |
| AAAGATGAGATGGAAGTTGA+TGG | 0.493558 | 3_3:-48264247 | Msa0455380:CDS |
| CCTTTAAAAGATATACCTAA+TGG | 0.493899 | 3_3:-48263548 | Msa0455380:intron |
| TGGAAAAGAATGATAATAAG+GGG | 0.495397 | 3_3:-48264279 | Msa0455380:CDS |
| AACTGATGGAGGGAAAGTCT+TGG | 0.495923 | 3_3:-48264677 | Msa0455380:CDS |
| AGATTTAGAGGTCAATGAGT+TGG | 0.495932 | 3_3:-48257774 | Msa0455380:CDS |
| GTTTCTAAGACTGATTCAAA+TGG | 0.497991 | 3_3:-48264754 | Msa0455380:CDS |
| GACTTTGAGGAAGACTTGGT+TGG | 0.500717 | 3_3:+48258554 | None:intergenic |
| AGGTCAAGAGTAATATATTG+AGG | 0.501216 | 3_3:-48261909 | Msa0455380:CDS |
| AGATAAGAAAGTTGAGGGTG+TGG | 0.501886 | 3_3:-48264602 | Msa0455380:CDS |
| AGATAAGGCAGAGGGTGGTA+AGG | 0.502132 | 3_3:-48263870 | Msa0455380:CDS |
| AAGAGGAGAAGAAAGATGAT+GGG | 0.505907 | 3_3:-48264354 | Msa0455380:CDS |
| AAGGAAGATAAGAGTGATCC+CGG | 0.507304 | 3_3:-48258833 | Msa0455380:CDS |
| TTCTTAGGTGCTCTCTTAGG+TGG | 0.507331 | 3_3:+48258689 | None:intergenic |
| AAGAAAGACTTGGGAACTGA+TGG | 0.509413 | 3_3:-48264691 | Msa0455380:CDS |
| AAGTAAAAGAAAAGCTAGAC+AGG | 0.509647 | 3_3:-48261624 | Msa0455380:CDS |
| AGAGACAGAGGAGAAGGAAG+AGG | 0.509912 | 3_3:-48263972 | Msa0455380:CDS |
| GAAGTAAAAGAGGATAAGAA+AGG | 0.509927 | 3_3:-48264502 | Msa0455380:CDS |
| GGAGAAGAAAGATGATGGGG+TGG | 0.510926 | 3_3:-48264350 | Msa0455380:CDS |
| CGGACTGGGCGATCACTAGT+TGG | 0.517456 | 3_3:+48263752 | None:intergenic |
| TAAATCAAAAGAAGAAGATA+AGG | 0.520812 | 3_3:-48263885 | Msa0455380:CDS |
| TGAAGAAGATAAGAAAGTTG+AGG | 0.521925 | 3_3:-48264608 | Msa0455380:CDS |
| GTGATCGCCCAGTCCGAGAA+AGG | 0.522949 | 3_3:-48263745 | Msa0455380:CDS |
| CACAGTTGTGGTTGCATGAG+GGG | 0.523115 | 3_3:+48261007 | None:intergenic |
| TATGGTGGAAGAAGTGAAAG+AGG | 0.525967 | 3_3:-48264407 | Msa0455380:CDS |
| CTAATCCACAATCAACAGTC+AGG | 0.527682 | 3_3:+48256862 | None:intergenic |
| TGAGGAGAAAACTGAAGTAG+AGG | 0.528696 | 3_3:-48264032 | Msa0455380:CDS |
| GACCTCTAAATCTTTGCGAA+TGG | 0.529861 | 3_3:+48257784 | None:intergenic |
| TAAGAAAGATGAAGATGGGG+TGG | 0.530937 | 3_3:-48264563 | Msa0455380:CDS |
| ACATCTTCAGATTCACTCCC+GGG | 0.535169 | 3_3:+48258815 | None:intergenic |
| GAAGTAGAGGAGAAGGAAGA+AGG | 0.536555 | 3_3:-48264019 | Msa0455380:CDS |
| TGGGGTGGGAGAAGTAAAAG+AGG | 0.537965 | 3_3:-48264548 | Msa0455380:CDS |
| TAGTATTGAGGAGAAAGAAG+AGG | 0.538774 | 3_3:-48264062 | Msa0455380:CDS |
| AGTATTGAGGAGAAAGAAGA+GGG | 0.539166 | 3_3:-48264061 | Msa0455380:CDS |
| CCTTCCCTCTCCTTCCAAAG+AGG | 0.541109 | 3_3:+48262117 | None:intergenic |
| GGATAAGAAAGACGATATGG+TGG | 0.541124 | 3_3:-48264422 | Msa0455380:CDS |
| TTAAGCCTGACTGTTGATTG+TGG | 0.542549 | 3_3:-48256867 | Msa0455380:three_prime_UTR |
| TTCATACAATCCTCTTTGGA+AGG | 0.542692 | 3_3:-48262127 | Msa0455380:CDS |
| TGGCAGCCAACCCAACCAAA+AGG | 0.543954 | 3_3:+48256680 | None:intergenic |
| AACGCCACAGAAATCTGAAA+AGG | 0.544460 | 3_3:-48258852 | Msa0455380:CDS |
| AAACGAGGTACACCAAGGTC+TGG | 0.545991 | 3_3:-48260819 | Msa0455380:CDS |
| AACTGAAGCAGAGACGGAGG+AGG | 0.546642 | 3_3:-48263933 | Msa0455380:CDS |
| AGTTGTTGAGAAGAAAGACT+TGG | 0.547694 | 3_3:-48264701 | Msa0455380:CDS |
| CACAATTTATTGTGTAGAAG+TGG | 0.548238 | 3_3:-48256783 | Msa0455380:three_prime_UTR |
| GGAGAAAACTGAAGCAGAGA+CGG | 0.548254 | 3_3:-48263939 | Msa0455380:CDS |
| GAGACAGAGGAGAAGGAAGA+GGG | 0.548993 | 3_3:-48263971 | Msa0455380:CDS |
| CAGAAAGGTGTCAACTTCAA+AGG | 0.551157 | 3_3:+48256569 | None:intergenic |
| TGAAGAAGAGACAGAGGAGA+AGG | 0.551387 | 3_3:-48263978 | Msa0455380:CDS |
| TGTAAGAAGAGTAGATCAGA+TGG | 0.555519 | 3_3:-48257861 | Msa0455380:CDS |
| GAAAGAAGAGGGTAATGATG+AGG | 0.555999 | 3_3:-48264050 | Msa0455380:CDS |
| AATAATACAAGGTTGGTATG+TGG | 0.556942 | 3_3:+48257906 | None:intergenic |
| GAGGTACACCAAGGTCTGGT+GGG | 0.558177 | 3_3:-48260815 | Msa0455380:CDS |
| AATTATCAATAAACCCAGAA+AGG | 0.559073 | 3_3:+48256554 | None:intergenic |
| AAATGAAGATTCTTCAGGAG+TGG | 0.559104 | 3_3:-48258981 | Msa0455380:CDS |
| AAAAGAAGAAGATAAGGCAG+AGG | 0.559965 | 3_3:-48263879 | Msa0455380:CDS |
| GAAGAAGATAAGGCAGAGGG+TGG | 0.560228 | 3_3:-48263875 | Msa0455380:CDS |
| GAGGGTGGTAAGGCTAAGAA+AGG | 0.565488 | 3_3:-48263860 | Msa0455380:CDS |
| ACCGAGTAGTTTCAGAATGT+CGG | 0.565823 | 3_3:+48257489 | None:intergenic |
| AAGAGGAGAAGAAAGACGAA+GGG | 0.566003 | 3_3:-48264390 | Msa0455380:CDS |
| CGAGGTACACCAAGGTCTGG+TGG | 0.566882 | 3_3:-48260816 | Msa0455380:CDS |
| ACCACAGTTGTGGTTGCATG+AGG | 0.568604 | 3_3:+48261005 | None:intergenic |
| TTCGATTGAACTGAGTGTGG+TGG | 0.568671 | 3_3:-48264842 | Msa0455380:five_prime_UTR |
| GTACTTGCCCCACCAGACCT+TGG | 0.569547 | 3_3:+48260807 | None:intergenic |
| TTTCAGAATGTCGGTAAATG+TGG | 0.569605 | 3_3:+48257498 | None:intergenic |
| TGAGTCCGAGGAAGATGAAG+AGG | 0.571197 | 3_3:-48256925 | Msa0455380:CDS |
| AAAGACTTGGGAACTGATGG+AGG | 0.575253 | 3_3:-48264688 | Msa0455380:CDS |
| ACTTTCATCCATATCATCAT+CGG | 0.575430 | 3_3:+48258643 | None:intergenic |
| AAGAAAGATGAAGATGGGGT+GGG | 0.575639 | 3_3:-48264562 | Msa0455380:CDS |
| GAAAACTGAAGCAGAGACGG+AGG | 0.576529 | 3_3:-48263936 | Msa0455380:CDS |
| AAGAAGAGTAGATCAGATGG+AGG | 0.578012 | 3_3:-48257858 | Msa0455380:CDS |
| ACAATCCTCTTTGGAAGGAG+AGG | 0.578641 | 3_3:-48262122 | Msa0455380:CDS |
| GGAAGAAGAAAAGTGAGCAA+GGG | 0.579111 | 3_3:-48258604 | Msa0455380:CDS |
| AGGAAGAAGAAAAGTGAGCA+AGG | 0.579169 | 3_3:-48258605 | Msa0455380:CDS |
| ACTTCCCCTAATGATTTCAC+CGG | 0.579831 | 3_3:+48264721 | None:intergenic |
| CCACAGTTGTGGTTGCATGA+GGG | 0.580323 | 3_3:+48261006 | None:intergenic |
| TGTGGTGGAAGAAGTAAAAG+AGG | 0.580587 | 3_3:-48264443 | Msa0455380:CDS |
| GTCCGAGGAAGATGAAGAGG+AGG | 0.580746 | 3_3:-48256922 | Msa0455380:CDS |
| TCTAAGACTGATTCAAATGG+AGG | 0.582420 | 3_3:-48264751 | Msa0455380:CDS |
| ATGCCGAGAAAGATGAAGAC+CGG | 0.582887 | 3_3:-48256899 | Msa0455380:CDS |
| AGGGGCTGATGAAGTAAAAG+AGG | 0.584501 | 3_3:-48264371 | Msa0455380:CDS |
| AAAGAGGAGAAGAAAGACGA+AGG | 0.585080 | 3_3:-48264391 | Msa0455380:CDS |
| CAATCCTCTTTGGAAGGAGA+GGG | 0.585119 | 3_3:-48262121 | Msa0455380:CDS |
| AAAGAGGATAAGAAAGCCGA+TGG | 0.586492 | 3_3:-48264532 | Msa0455380:CDS |
| GGGTGTGGAAAAGGTACAAG+AGG | 0.588552 | 3_3:-48264587 | Msa0455380:CDS |
| TGACATCCAAGAAATTGAAG+AGG | 0.590365 | 3_3:-48264191 | Msa0455380:CDS |
| TTCAGCTAACAAATTTGATG+GGG | 0.591701 | 3_3:-48257021 | Msa0455380:intron |
| TGAAGAAGCAGATGAGTCCG+AGG | 0.591862 | 3_3:-48256937 | Msa0455380:CDS |
| GGATAAGAAAGATGAAGATG+GGG | 0.592297 | 3_3:-48264566 | Msa0455380:CDS |
| AGAGGAGAAGAAAGATGATG+GGG | 0.593216 | 3_3:-48264353 | Msa0455380:CDS |
| GTTGTTGAGAAGAAAGACTT+GGG | 0.597406 | 3_3:-48264700 | Msa0455380:CDS |
| GAAGAAGAAAAGTGAGCAAG+GGG | 0.597718 | 3_3:-48258603 | Msa0455380:CDS |
| GCTCATGATTCAGAAAGAGC+TGG | 0.598185 | 3_3:-48256970 | Msa0455380:CDS |
| TAAGCAGAAAAGGTTACTAA+GGG | 0.598561 | 3_3:-48258387 | Msa0455380:intron |
| TCTGCAAAGAAAGAGTCCGC+TGG | 0.599453 | 3_3:-48258761 | Msa0455380:CDS |
| AGAGGATAAGAAAGGTGATG+TGG | 0.602479 | 3_3:-48264494 | Msa0455380:CDS |
| TATCTGAGCAAGATCAGTAT+GGG | 0.603679 | 3_3:-48264799 | Msa0455380:exon |
| GAGCAAGATCAGTATGGGCA+AGG | 0.606002 | 3_3:-48264794 | Msa0455380:exon |
| ATCACGCAACTGATCATCTG+TGG | 0.606367 | 3_3:+48258332 | None:intergenic |
| GGGAAAGTCTTGGAGAGTAA+CGG | 0.606902 | 3_3:-48264667 | Msa0455380:CDS |
| TGACACAGAAGATGAATCAG+AGG | 0.610205 | 3_3:-48258942 | Msa0455380:CDS |
| TCACGCAACTGATCATCTGT+GGG | 0.610473 | 3_3:+48258333 | None:intergenic |
| TGATGGTGCAGATGAAGTAA+AGG | 0.610805 | 3_3:-48264302 | Msa0455380:CDS |
| GAAATCTGAAGAAGAGACAG+AGG | 0.614258 | 3_3:-48263984 | Msa0455380:CDS |
| TGGTGCAGATGAAGTAAAGG+TGG | 0.616571 | 3_3:-48264299 | Msa0455380:CDS |
| ACCGACATTCTGAAACTACT+CGG | 0.616858 | 3_3:-48257490 | Msa0455380:intron |
| TGGCATTTAAGTTATCCAGA+AGG | 0.625830 | 3_3:-48262175 | Msa0455380:CDS |
| CAAGGAATTACACATTGCAA+AGG | 0.625952 | 3_3:-48263678 | Msa0455380:intron |
| GTACACAATAAACTACATGC+TGG | 0.627433 | 3_3:+48256660 | None:intergenic |
| AAAGAAGAAGATAAGGCAGA+GGG | 0.632326 | 3_3:-48263878 | Msa0455380:CDS |
| AGATATTATTGCTAAGCTGA+CGG | 0.633751 | 3_3:-48261042 | Msa0455380:CDS |
| CTGATCTACTCTTCTTACAA+CGG | 0.635287 | 3_3:+48257865 | None:intergenic |
| TGATGGCGTGAAAGAAGCAG+TGG | 0.636058 | 3_3:-48264230 | Msa0455380:CDS |
| AAGCAAAACTGAGAAAACTA+CGG | 0.636134 | 3_3:-48258735 | Msa0455380:CDS |
| AATTACCAAGTCAACAACAA+AGG | 0.637558 | 3_3:-48261554 | Msa0455380:intron |
| AAGAGGATAAGAAAGCCGAT+GGG | 0.641052 | 3_3:-48264531 | Msa0455380:CDS |
| AGGAAGATAAGAGTGATCCC+GGG | 0.642926 | 3_3:-48258832 | Msa0455380:CDS |
| AATCGATAAAGATGCAACCA+AGG | 0.642945 | 3_3:-48263696 | Msa0455380:CDS |
| TATGGGCAAGGAAGAAGCAG+TGG | 0.644069 | 3_3:-48264782 | Msa0455380:CDS |
| GGTGGGGCAAGTACTTCAAG+AGG | 0.645902 | 3_3:-48260798 | Msa0455380:CDS |
| GGAAAAGAATGATAATAAGG+GGG | 0.646722 | 3_3:-48264278 | Msa0455380:CDS |
| TACTTCAAGAGGTTCTGGAA+AGG | 0.647752 | 3_3:-48260787 | Msa0455380:intron |
| ATCAGTCAAGCAAGAAGCGT+AGG | 0.648173 | 3_3:-48260851 | Msa0455380:intron |
| TCAGGCTTAAGGCTTAAGAC+CGG | 0.652864 | 3_3:+48256880 | None:intergenic |
| AGTCAAGCAAGAAGCGTAGG+CGG | 0.654264 | 3_3:-48260848 | Msa0455380:CDS |
| GGAGAGTAACGGAGTCAAAG+AGG | 0.655908 | 3_3:-48264656 | Msa0455380:CDS |
| AAGAAGAAAAGTGAGCAAGG+GGG | 0.662817 | 3_3:-48258602 | Msa0455380:CDS |
| GACACAGAAGATGAATCAGA+GGG | 0.663780 | 3_3:-48258941 | Msa0455380:CDS |
| AGAGGATAAGAAAGCCGATG+GGG | 0.663923 | 3_3:-48264530 | Msa0455380:CDS |
| GAAAATGGATGTTGATGCTG+AGG | 0.663965 | 3_3:-48264137 | Msa0455380:CDS |
| TGATATGGATGAAAGTCCAA+AGG | 0.664607 | 3_3:-48258636 | Msa0455380:CDS |
| TGGCGTGAAAGAAGCAGTGG+AGG | 0.667391 | 3_3:-48264227 | Msa0455380:CDS |
| AAGACTTGGGAACTGATGGA+GGG | 0.668385 | 3_3:-48264687 | Msa0455380:CDS |
| CGTTCCGGTGAAATCATTAG+GGG | 0.675116 | 3_3:-48264725 | Msa0455380:CDS |
| CCTCTTTGGAAGGAGAGGGA+AGG | 0.676579 | 3_3:-48262117 | Msa0455380:intron |
| AGAGGAGAAGAAAGACGAAG+GGG | 0.680624 | 3_3:-48264389 | Msa0455380:CDS |
| AGGTACACCAAGGTCTGGTG+GGG | 0.684360 | 3_3:-48260814 | Msa0455380:CDS |
| CGTAGGCGGACTGTCAAACG+AGG | 0.686061 | 3_3:-48260834 | Msa0455380:CDS |
| TTGTTCGATTGAACTGAGTG+TGG | 0.687290 | 3_3:-48264845 | Msa0455380:five_prime_UTR |
| CCCTCATGCAACCACAACTG+TGG | 0.690039 | 3_3:-48261006 | Msa0455380:CDS |
| GAGGATAAGAAAGCCGATGG+GGG | 0.702206 | 3_3:-48264529 | Msa0455380:CDS |
| CTGTCAAACGAGGTACACCA+AGG | 0.724868 | 3_3:-48260824 | Msa0455380:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTGTTTTATTTAGAATTTT+AGG | - | chr3_3:48256771-48256790 | Msa0455380:three_prime_UTR | 10.0% |
| !! | AAAATAAAAATGCATAATTA+AGG | + | chr3_3:48258641-48258660 | None:intergenic | 10.0% |
| !!! | TTTTGTTTTTTGTATTATTA+CGG | - | chr3_3:48260233-48260252 | Msa0455380:intron | 10.0% |
| !! | ATACATAATTAAAATATCAA+AGG | - | chr3_3:48260930-48260949 | Msa0455380:intron | 10.0% |
| !!! | TATTTAAATTAAATGCATTT+TGG | + | chr3_3:48262948-48262967 | None:intergenic | 10.0% |
| !!! | TTGATATATAAAGTATTTTT+AGG | - | chr3_3:48264038-48264057 | Msa0455380:CDS | 10.0% |
| !! | GTAAATTCCAAAAAAAAATT+GGG | + | chr3_3:48256751-48256770 | None:intergenic | 15.0% |
| !! | AGTAAATTCCAAAAAAAAAT+TGG | + | chr3_3:48256752-48256771 | None:intergenic | 15.0% |
| !!! | AAATATTATGTTTTGAACTT+AGG | - | chr3_3:48256815-48256834 | Msa0455380:three_prime_UTR | 15.0% |
| !! | ATAGATTATTTATAAAAGAG+TGG | + | chr3_3:48259642-48259661 | None:intergenic | 15.0% |
| !!! | TGGTATTCTAATATTTTAAT+CGG | + | chr3_3:48259854-48259873 | None:intergenic | 15.0% |
| !! | ATTAAAATATTAGAATACCA+CGG | - | chr3_3:48259854-48259873 | Msa0455380:intron | 15.0% |
| !! | AAAACAAAATCAAATCAATA+AGG | + | chr3_3:48260222-48260241 | None:intergenic | 15.0% |
| !!! | TATTATAGTTTGTAGTTTTT+GGG | + | chr3_3:48260416-48260435 | None:intergenic | 15.0% |
| !! | TACTATTATATAAAGACAAA+TGG | - | chr3_3:48260848-48260867 | Msa0455380:CDS | 15.0% |
| !!! | TTTTTTTTTTTACTGTGTTT+TGG | + | chr3_3:48261819-48261838 | None:intergenic | 15.0% |
| !! | ACCAAATTAAAATTAGTATT+GGG | - | chr3_3:48262456-48262475 | Msa0455380:intron | 15.0% |
| !!! | AGTTATGTTTGTTTATTTTT+AGG | + | chr3_3:48262768-48262787 | None:intergenic | 15.0% |
| !! | CGATTAAAAAAAAAAAATTG+GGG | + | chr3_3:48263089-48263108 | None:intergenic | 15.0% |
| !! | CCGATTAAAAAAAAAAAATT+GGG | + | chr3_3:48263090-48263109 | None:intergenic | 15.0% |
| !!! | CCCAATTTTTTTTTTTTAAT+CGG | - | chr3_3:48263087-48263106 | Msa0455380:intron | 15.0% |
| !! | ATAAAATAAAATGCAATACA+AGG | + | chr3_3:48263149-48263168 | None:intergenic | 15.0% |
| !!! | AACATTTATATTTTAACTAG+CGG | + | chr3_3:48263798-48263817 | None:intergenic | 15.0% |
| !! | ATATCGTGAAATTAAAAAAT+TGG | - | chr3_3:48264276-48264295 | Msa0455380:CDS | 15.0% |
| !! | TTAAAAAATTGGATGATTAA+AGG | - | chr3_3:48264287-48264306 | Msa0455380:CDS | 15.0% |
| !! | TGGAATTTATAAAACTAAAT+TGG | - | chr3_3:48264624-48264643 | Msa0455380:CDS | 15.0% |
| !!! | AATATTTTTATTTGCTTTGT+TGG | - | chr3_3:48264656-48264675 | Msa0455380:CDS | 15.0% |
| !!! | AAAAAAAGAACTTTCAATTT+TGG | + | chr3_3:48264730-48264749 | None:intergenic | 15.0% |
| !!! | ATTGATAATTTCTTATTGTT+AGG | - | chr3_3:48265717-48265736 | Msa0455380:five_prime_UTR | 15.0% |
| !!! | TTTTAAAGTCAATTGTTTTG+TGG | - | chr3_3:48256685-48256704 | Msa0455380:three_prime_UTR | 20.0% |
| !!! | TTTAAAGTCAATTGTTTTGT+GGG | - | chr3_3:48256686-48256705 | Msa0455380:three_prime_UTR | 20.0% |
| !!! | GAAAAATCCCAATTTTTTTT+TGG | - | chr3_3:48256741-48256760 | Msa0455380:three_prime_UTR | 20.0% |
| !! | ACTTGTATGTTTATAGTTTA+GGG | - | chr3_3:48256880-48256899 | Msa0455380:exon | 20.0% |
| !! | TAAATGAGTATTTAATGTTG+TGG | - | chr3_3:48256950-48256969 | Msa0455380:CDS | 20.0% |
| !!! | ATGTTGTGGTTTTTTTTTTT+TGG | - | chr3_3:48256964-48256983 | Msa0455380:CDS | 20.0% |
| !!! | ATTAGTGTCACTTTAATAAA+TGG | - | chr3_3:48257147-48257166 | Msa0455380:intron | 20.0% |
| !!! | TAAAAGTGCAAAGAAAATAA+TGG | + | chr3_3:48257356-48257375 | None:intergenic | 20.0% |
| !!! | ATTTTCTTTGCACTTTTATA+TGG | - | chr3_3:48257358-48257377 | Msa0455380:intron | 20.0% |
| !! | TAAATCAAAAGAAGAAGATA+AGG | - | chr3_3:48258373-48258392 | Msa0455380:CDS | 20.0% |
| !!! | TTTTTTTTTTTTATCTGCGA+TGG | - | chr3_3:48258757-48258776 | Msa0455380:CDS | 20.0% |
| !! | TATAGAGTATATACATAGAA+GGG | + | chr3_3:48258793-48258812 | None:intergenic | 20.0% |
| !! | AACTGAATCATTTATTTGAT+CGG | + | chr3_3:48259081-48259100 | None:intergenic | 20.0% |
| !!! | TCTAAAACTTTAGTATCTAA+AGG | - | chr3_3:48259271-48259290 | Msa0455380:intron | 20.0% |
| !!! | GTATTATAGTTTGTAGTTTT+TGG | + | chr3_3:48260417-48260436 | None:intergenic | 20.0% |
| !! | TTGGATGAACAAAAAAAAAA+GGG | + | chr3_3:48260567-48260586 | None:intergenic | 20.0% |
| !! | TTTGGATGAACAAAAAAAAA+AGG | + | chr3_3:48260568-48260587 | None:intergenic | 20.0% |
| !! | TATTAGGATTTAACAAACTT+TGG | + | chr3_3:48260586-48260605 | None:intergenic | 20.0% |
| !!! | AATCCTAATATTTTTTCTAC+AGG | - | chr3_3:48260596-48260615 | Msa0455380:intron | 20.0% |
| !!! | GCATCATATTCATATTTTTA+TGG | - | chr3_3:48261375-48261394 | Msa0455380:intron | 20.0% |
| !! | CACTATATTTGTTTATTATC+CGG | + | chr3_3:48262091-48262110 | None:intergenic | 20.0% |
| !!! | CAATACTAATTTTAATTTGG+TGG | + | chr3_3:48262457-48262476 | None:intergenic | 20.0% |
| !! | CACCAAATTAAAATTAGTAT+TGG | - | chr3_3:48262455-48262474 | Msa0455380:intron | 20.0% |
| !! | AATAAATAGAGTAAAGAAAG+GGG | + | chr3_3:48262745-48262764 | None:intergenic | 20.0% |
| !! | GAATAAATAGAGTAAAGAAA+GGG | + | chr3_3:48262746-48262765 | None:intergenic | 20.0% |
| !! | AAAAAAAAAATTGGGGTAAA+TGG | + | chr3_3:48263082-48263101 | None:intergenic | 20.0% |
| !! | GCCGATTAAAAAAAAAAAAT+TGG | + | chr3_3:48263091-48263110 | None:intergenic | 20.0% |
| !!! | AAGTTCTTTTTTTCTTTTAC+AGG | - | chr3_3:48264737-48264756 | Msa0455380:CDS | 20.0% |
| !!! | CTCATAATTTTAACTGAAAA+AGG | + | chr3_3:48264846-48264865 | None:intergenic | 20.0% |
| !! | TAAATATGCTAGATTGTTAA+GGG | + | chr3_3:48264987-48265006 | None:intergenic | 20.0% |
| !!! | AATCTAGCATATTTAGTTTT+AGG | - | chr3_3:48264992-48265011 | Msa0455380:intron | 20.0% |
| !! | TTTTTCACAAAGAGATGAAA+GGG | + | chr3_3:48256648-48256667 | None:intergenic | 25.0% |
| ! | GACTTGTATGTTTATAGTTT+AGG | - | chr3_3:48256879-48256898 | Msa0455380:exon | 25.0% |
| !!! | TTTAGGGTTTGATCTTTTTA+GGG | - | chr3_3:48256896-48256915 | Msa0455380:CDS | 25.0% |
| !! | ACTAATGAACATTTTACAAC+CGG | + | chr3_3:48257133-48257152 | None:intergenic | 25.0% |
| !!! | TATAAATGTTTTGAGACTTC+TGG | - | chr3_3:48257299-48257318 | Msa0455380:intron | 25.0% |
| ! | GTGGAAAAGAATGATAATAA+GGG | - | chr3_3:48257978-48257997 | Msa0455380:intron | 25.0% |
| ! | TGGAAAAGAATGATAATAAG+GGG | - | chr3_3:48257979-48257998 | Msa0455380:intron | 25.0% |
| !! | CCATTAGGTATATCTTTTAA+AGG | + | chr3_3:48258713-48258732 | None:intergenic | 25.0% |
| !! | CCTTTAAAAGATATACCTAA+TGG | - | chr3_3:48258710-48258729 | Msa0455380:CDS | 25.0% |
| ! | ATAGAGTATATACATAGAAG+GGG | + | chr3_3:48258792-48258811 | None:intergenic | 25.0% |
| ! | CTATAGAGTATATACATAGA+AGG | + | chr3_3:48258794-48258813 | None:intergenic | 25.0% |
| ! | CTGACTATCAAACAATATAT+CGG | + | chr3_3:48258916-48258935 | None:intergenic | 25.0% |
| ! | GCACGGTTATATATATTATA+TGG | + | chr3_3:48258989-48259008 | None:intergenic | 25.0% |
| ! | GCATAGAATGAAAAAGAAAA+AGG | + | chr3_3:48259142-48259161 | None:intergenic | 25.0% |
| !! | TTCACAAAAGTACAGTAAAT+TGG | + | chr3_3:48259416-48259435 | None:intergenic | 25.0% |
| !! | TTTACTGTACTTTTGTGAAT+TGG | - | chr3_3:48259417-48259436 | Msa0455380:intron | 25.0% |
| !!! | GAAAGTTTTGTGAACAAATA+AGG | + | chr3_3:48259667-48259686 | None:intergenic | 25.0% |
| ! | CACTTAAATATATGTGTAAC+AGG | + | chr3_3:48259951-48259970 | None:intergenic | 25.0% |
| !! | TATTTACATTTGTTACACTG+TGG | - | chr3_3:48260011-48260030 | Msa0455380:intron | 25.0% |
| !! | AATGCATTTTTCTTCTTTAG+TGG | - | chr3_3:48260063-48260082 | Msa0455380:intron | 25.0% |
| ! | ACAAAATCAAATCAATAAGG+TGG | + | chr3_3:48260219-48260238 | None:intergenic | 25.0% |
| !! | TTCTATAGATCAGGATTTTT+GGG | - | chr3_3:48260256-48260275 | Msa0455380:intron | 25.0% |
| ! | GATTAAAAAAAAGAGTCACA+TGG | + | chr3_3:48260314-48260333 | None:intergenic | 25.0% |
| !!! | TCTTTTTTTTAATCCTTTGC+AGG | - | chr3_3:48260320-48260339 | Msa0455380:intron | 25.0% |
| !! | AGTAATATATTGAGGTTTTC+TGG | - | chr3_3:48260357-48260376 | Msa0455380:intron | 25.0% |
| ! | TCTCCTGTAGAAAAAATATT+AGG | + | chr3_3:48260602-48260621 | None:intergenic | 25.0% |
| !!! | TTGTCAAACACACTTATTTT+GGG | + | chr3_3:48260790-48260809 | None:intergenic | 25.0% |
| !! | ATTGTCAAACACACTTATTT+TGG | + | chr3_3:48260791-48260810 | None:intergenic | 25.0% |
| ! | ACAAAGATTATTCATAAACC+CGG | + | chr3_3:48261075-48261094 | None:intergenic | 25.0% |
| ! | TATTATTGCCAATGAATTTC+TGG | - | chr3_3:48261183-48261202 | Msa0455380:intron | 25.0% |
| ! | GACATCATGTAGAAAAAAAT+TGG | + | chr3_3:48261316-48261335 | None:intergenic | 25.0% |
| !!! | TTTTTTTCTACATGATGTCA+TGG | - | chr3_3:48261317-48261336 | Msa0455380:intron | 25.0% |
| ! | ATAGTGAAAAGGTTATAAGT+TGG | + | chr3_3:48261650-48261669 | None:intergenic | 25.0% |
| !! | TTCATTGACTAATAGTGAAA+AGG | + | chr3_3:48261661-48261680 | None:intergenic | 25.0% |
| ! | ACTATTAGTCAATGAATACT+AGG | - | chr3_3:48261665-48261684 | Msa0455380:intron | 25.0% |
| !! | AAAAAAAAGAGGGTATGTTT+AGG | + | chr3_3:48261894-48261913 | None:intergenic | 25.0% |
| ! | CACCAAATAAAATTAGCATT+GGG | - | chr3_3:48262364-48262383 | Msa0455380:intron | 25.0% |
| !!! | GCCCAATACTAATTTTAATT+TGG | + | chr3_3:48262460-48262479 | None:intergenic | 25.0% |
| ! | ATTAAGAATCTGATAGAAAC+TGG | - | chr3_3:48262506-48262525 | Msa0455380:intron | 25.0% |
| ! | TACCAAGCATAGAAATTTAA+GGG | - | chr3_3:48262529-48262548 | Msa0455380:intron | 25.0% |
| ! | AGAGATTATTCAACAAAAGT+CGG | + | chr3_3:48262561-48262580 | None:intergenic | 25.0% |
| ! | GCTCTCTTATTAATTATTGA+AGG | + | chr3_3:48262673-48262692 | None:intergenic | 25.0% |
| ! | CAATAATTAATAAGAGAGCT+TGG | - | chr3_3:48262674-48262693 | Msa0455380:intron | 25.0% |
| ! | GGAATAAATAGAGTAAAGAA+AGG | + | chr3_3:48262747-48262766 | None:intergenic | 25.0% |
| !!! | TTTGAGCAATTGTCATTTTT+GGG | - | chr3_3:48262833-48262852 | Msa0455380:intron | 25.0% |
| !!! | TATGTAGTTGATGAAATGTA+AGG | - | chr3_3:48262969-48262988 | Msa0455380:intron | 25.0% |
| !!! | AGACTTACTTAGTAGTTTTT+TGG | - | chr3_3:48263009-48263028 | Msa0455380:intron | 25.0% |
| ! | AAGAAAAATGAAGATTCTTC+AGG | - | chr3_3:48263272-48263291 | Msa0455380:intron | 25.0% |
| ! | AGAGAAAAATGAAGAAAATG+AGG | - | chr3_3:48263343-48263362 | Msa0455380:intron | 25.0% |
| ! | AATCTGAAGATGTGAAAAAA+AGG | - | chr3_3:48263453-48263472 | Msa0455380:intron | 25.0% |
| !! | TTGGTATTTGATGATTTCTT+AGG | + | chr3_3:48263587-48263606 | None:intergenic | 25.0% |
| !!! | TATATTTTAACTAGCGGAAA+AGG | + | chr3_3:48263792-48263811 | None:intergenic | 25.0% |
| !! | TAAAGAAGTTGACTTCAATA+CGG | - | chr3_3:48263966-48263985 | Msa0455380:CDS | 25.0% |
| !! | ATAATGTACCTTTATTGACT+GGG | - | chr3_3:48264074-48264093 | Msa0455380:CDS | 25.0% |
| ! | AATAAAATGTGGGTAATTGA+GGG | - | chr3_3:48264237-48264256 | Msa0455380:CDS | 25.0% |
| ! | TAGTTGGCAAAAATAATACA+AGG | + | chr3_3:48264366-48264385 | None:intergenic | 25.0% |
| ! | TTTATAAATTCCACTAGTGA+AGG | + | chr3_3:48264617-48264636 | None:intergenic | 25.0% |
| !!! | ATTTTTATTTGCTTTGTTGG+TGG | - | chr3_3:48264659-48264678 | Msa0455380:CDS | 25.0% |
| !! | CATAAAAGAATTTTGCTCTT+AGG | + | chr3_3:48264886-48264905 | None:intergenic | 25.0% |
| ! | CTAAATATGCTAGATTGTTA+AGG | + | chr3_3:48264988-48265007 | None:intergenic | 25.0% |
| !! | TTTTCAGCTAACAAATTTGA+TGG | - | chr3_3:48265235-48265254 | Msa0455380:intron | 25.0% |
| ! | TTTCAGCTAACAAATTTGAT+GGG | - | chr3_3:48265236-48265255 | Msa0455380:intron | 25.0% |
| ! | CTTGAAACTAGAAGAAAAAA+AGG | + | chr3_3:48265643-48265662 | None:intergenic | 25.0% |
| ! | AATTATCAATAAACCCAGAA+AGG | + | chr3_3:48265707-48265726 | None:intergenic | 25.0% |
| AAACTTACAGATTCAGGATT+TGG | + | chr3_3:48256605-48256624 | None:intergenic | 30.0% | |
| AGTAGAAAACTTACAGATTC+AGG | + | chr3_3:48256611-48256630 | None:intergenic | 30.0% | |
| !! | CTTTTTCACAAAGAGATGAA+AGG | + | chr3_3:48256649-48256668 | None:intergenic | 30.0% |
| ! | TTGAACTTAGGTTTTTGCTA+TGG | - | chr3_3:48256827-48256846 | Msa0455380:three_prime_UTR | 30.0% |
| !! | GTTTAGGGTTTGATCTTTTT+AGG | - | chr3_3:48256895-48256914 | Msa0455380:CDS | 30.0% |
| ! | TTAGGGTTTGATCTTTTTAG+GGG | - | chr3_3:48256897-48256916 | Msa0455380:CDS | 30.0% |
| CTTAATTATTCATCCATCTC+AGG | - | chr3_3:48256990-48257009 | Msa0455380:CDS | 30.0% | |
| AAATACCCTTCTGTTGTAAA+TGG | - | chr3_3:48257265-48257284 | Msa0455380:intron | 30.0% | |
| !! | GTTTCTAAGACTGATTCAAA+TGG | - | chr3_3:48257504-48257523 | Msa0455380:intron | 30.0% |
| TGAAGAAGATAAGAAAGTTG+AGG | - | chr3_3:48257650-48257669 | Msa0455380:intron | 30.0% | |
| GAAGAAGATAAGAAAGTTGA+GGG | - | chr3_3:48257651-48257670 | Msa0455380:intron | 30.0% | |
| AGGATAAGAAAGATGAAGAT+GGG | - | chr3_3:48257691-48257710 | Msa0455380:intron | 30.0% | |
| GAAGTAAAAGAGGATAAGAA+AGG | - | chr3_3:48257720-48257739 | Msa0455380:intron | 30.0% | |
| GGAAGAAGTAAAAGAGAATA+AGG | - | chr3_3:48257929-48257948 | Msa0455380:intron | 30.0% | |
| AAAGAGAATAAGGAAGTTGA+TGG | - | chr3_3:48257939-48257958 | Msa0455380:intron | 30.0% | |
| GGTGGAAAAGAATGATAATA+AGG | - | chr3_3:48257977-48257996 | Msa0455380:intron | 30.0% | |
| GGAAAAGAATGATAATAAGG+GGG | - | chr3_3:48257980-48257999 | Msa0455380:intron | 30.0% | |
| TGAATCTGAGAATGAGAAAA+TGG | - | chr3_3:48258106-48258125 | Msa0455380:intron | 30.0% | |
| TGCAGAAGATAAAGAAGAAA+AGG | - | chr3_3:48258154-48258173 | Msa0455380:intron | 30.0% | |
| GAAAGTGAAAGACAAAAAGA+AGG | - | chr3_3:48258457-48258476 | Msa0455380:intron | 30.0% | |
| ! | AGTTTCCTTTTCAATTTGCA+GGG | - | chr3_3:48258677-48258696 | Msa0455380:CDS | 30.0% |
| AACTATATATATTGCACGCA+CGG | + | chr3_3:48259006-48259025 | None:intergenic | 30.0% | |
| TTTCTTGCTCATATAAACCA+GGG | + | chr3_3:48259499-48259518 | None:intergenic | 30.0% | |
| ! | TTTTCTTGCTCATATAAACC+AGG | + | chr3_3:48259500-48259519 | None:intergenic | 30.0% |
| TTGTTTCATACAATCCTCTT+TGG | - | chr3_3:48260127-48260146 | Msa0455380:intron | 30.0% | |
| CAATTGTAAACAGAAAGACA+CGG | + | chr3_3:48260189-48260208 | None:intergenic | 30.0% | |
| TTATTACGGTTCTATAGATC+AGG | - | chr3_3:48260247-48260266 | Msa0455380:intron | 30.0% | |
| ! | GTTCTATAGATCAGGATTTT+TGG | - | chr3_3:48260255-48260274 | Msa0455380:intron | 30.0% |
| !!! | TTTTGGGTTATGGAATTTAC+AGG | - | chr3_3:48260272-48260291 | Msa0455380:intron | 30.0% |
| AGGTCAAGAGTAATATATTG+AGG | - | chr3_3:48260349-48260368 | Msa0455380:intron | 30.0% | |
| AAGTAAAAGAAAAGCTAGAC+AGG | - | chr3_3:48260634-48260653 | Msa0455380:intron | 30.0% | |
| AATTACCAAGTCAACAACAA+AGG | - | chr3_3:48260704-48260723 | Msa0455380:intron | 30.0% | |
| AGTCAACAAGGTTTCATTTA+AGG | + | chr3_3:48261140-48261159 | None:intergenic | 30.0% | |
| TTAAATGAAACCTTGTTGAC+TGG | - | chr3_3:48261139-48261158 | Msa0455380:intron | 30.0% | |
| TTAAATGATACCAGTCAACA+AGG | + | chr3_3:48261152-48261171 | None:intergenic | 30.0% | |
| ! | ATTGATAACCTGGTATTCAT+GGG | + | chr3_3:48261614-48261633 | None:intergenic | 30.0% |
| ! | AACAAGTTTCATTGATAACC+TGG | + | chr3_3:48261624-48261643 | None:intergenic | 30.0% |
| GGGGAAAAAGAAAAAAAAGA+GGG | + | chr3_3:48261904-48261923 | None:intergenic | 30.0% | |
| !!! | CTCTTTTTTTTCTTTTTCCC+CGG | - | chr3_3:48261903-48261922 | Msa0455380:CDS | 30.0% |
| AATCAGTTTAGGTCTTTCTA+GGG | + | chr3_3:48261947-48261966 | None:intergenic | 30.0% | |
| TTATCTTCTCCAATCAGTTT+AGG | + | chr3_3:48261958-48261977 | None:intergenic | 30.0% | |
| GAAGGAAAAATTGGATGAAT+AGG | + | chr3_3:48261986-48262005 | None:intergenic | 30.0% | |
| !!! | AAGCCAATGTTTTAAAAACC+AGG | - | chr3_3:48262019-48262038 | Msa0455380:intron | 30.0% |
| ! | TTTGTGCTGTTACATATGTA+TGG | - | chr3_3:48262184-48262203 | Msa0455380:intron | 30.0% |
| TATGGTTATGTCGAAGTTTA+GGG | + | chr3_3:48262235-48262254 | None:intergenic | 30.0% | |
| TAATCTATGAAGTCCATTTG+CGG | + | chr3_3:48262314-48262333 | None:intergenic | 30.0% | |
| !! | CCAATGCTAATTTTATTTGG+TGG | + | chr3_3:48262366-48262385 | None:intergenic | 30.0% |
| CCACCAAATAAAATTAGCAT+TGG | - | chr3_3:48262363-48262382 | Msa0455380:intron | 30.0% | |
| ! | AGCCCAATGCTAATTTTATT+TGG | + | chr3_3:48262369-48262388 | None:intergenic | 30.0% |
| ! | AATTAGTATTGGGCTAACAT+TGG | - | chr3_3:48262466-48262485 | Msa0455380:intron | 30.0% |
| GTACCAAGCATAGAAATTTA+AGG | - | chr3_3:48262528-48262547 | Msa0455380:intron | 30.0% | |
| TACCCTTAAATTTCTATGCT+TGG | + | chr3_3:48262534-48262553 | None:intergenic | 30.0% | |
| ! | GACTTTTGTTGAATAATCTC+TGG | - | chr3_3:48262560-48262579 | Msa0455380:intron | 30.0% |
| ACACAATTACACAACTTAGA+AGG | - | chr3_3:48262606-48262625 | Msa0455380:intron | 30.0% | |
| ! | AGACACAATTCTGAGAAATA+AGG | - | chr3_3:48262633-48262652 | Msa0455380:intron | 30.0% |
| CATAACTGACAATTAGTAAG+AGG | - | chr3_3:48262781-48262800 | Msa0455380:intron | 30.0% | |
| !!! | GTTTGAGCAATTGTCATTTT+TGG | - | chr3_3:48262832-48262851 | Msa0455380:intron | 30.0% |
| !!! | ATAAGCTTTGGAGCTTTTAT+AGG | + | chr3_3:48262881-48262900 | None:intergenic | 30.0% |
| TGCATGCAAATAATATGTTG+TGG | - | chr3_3:48262921-48262940 | Msa0455380:intron | 30.0% | |
| GCATGCAAATAATATGTTGT+GGG | - | chr3_3:48262922-48262941 | Msa0455380:intron | 30.0% | |
| ACCAATATCAAATTACGAGT+TGG | + | chr3_3:48263125-48263144 | None:intergenic | 30.0% | |
| ! | TTCTCAGGAATATCATTTTC+AGG | + | chr3_3:48263374-48263393 | None:intergenic | 30.0% |
| ! | TTTCTTTGCAGATGATGTTT+TGG | + | chr3_3:48263489-48263508 | None:intergenic | 30.0% |
| AAGCAAAACTGAGAAAACTA+CGG | - | chr3_3:48263523-48263542 | Msa0455380:intron | 30.0% | |
| ACTTTCATCCATATCATCAT+CGG | + | chr3_3:48263618-48263637 | None:intergenic | 30.0% | |
| !!! | AAAGTCCAAAGGTATTTTCT+AGG | - | chr3_3:48263633-48263652 | Msa0455380:intron | 30.0% |
| TTCTTCCTAGAAAATACCTT+TGG | + | chr3_3:48263641-48263660 | None:intergenic | 30.0% | |
| TAAGCAGAAAAGGTTACTAA+GGG | - | chr3_3:48263871-48263890 | Msa0455380:CDS | 30.0% | |
| ACTTCAATACGGTAATATGT+TGG | - | chr3_3:48263977-48263996 | Msa0455380:CDS | 30.0% | |
| CATAATGTACCTTTATTGAC+TGG | - | chr3_3:48264073-48264092 | Msa0455380:CDS | 30.0% | |
| TAGTAACATTGGCATAGAAA+AGG | + | chr3_3:48264158-48264177 | None:intergenic | 30.0% | |
| !!! | TTTTGTAGCTCTAGTAACAT+TGG | + | chr3_3:48264169-48264188 | None:intergenic | 30.0% |
| ATGCATATCCATACATGAAT+TGG | + | chr3_3:48264212-48264231 | None:intergenic | 30.0% | |
| ATGCATGACTCAATAAAATG+TGG | - | chr3_3:48264226-48264245 | Msa0455380:CDS | 30.0% | |
| TGCATGACTCAATAAAATGT+GGG | - | chr3_3:48264227-48264246 | Msa0455380:CDS | 30.0% | |
| CAATAAAATGTGGGTAATTG+AGG | - | chr3_3:48264236-48264255 | Msa0455380:CDS | 30.0% | |
| !! | AATAATACAAGGTTGGTATG+TGG | + | chr3_3:48264355-48264374 | None:intergenic | 30.0% |
| TGGCAAAAATAATACAAGGT+TGG | + | chr3_3:48264362-48264381 | None:intergenic | 30.0% | |
| ! | GTTTCTCTAATGGTTTTCTT+AGG | + | chr3_3:48264455-48264474 | None:intergenic | 30.0% |
| GTTCTATCAAAAACCGTATT+TGG | + | chr3_3:48264512-48264531 | None:intergenic | 30.0% | |
| ! | TTTTTGATAGAACACTATGG+CGG | - | chr3_3:48264519-48264538 | Msa0455380:CDS | 30.0% |
| TAGATTGAAGTTGAACAACT+TGG | - | chr3_3:48264682-48264701 | Msa0455380:CDS | 30.0% | |
| AGGTATAGCTACTAATATTG+TGG | + | chr3_3:48264826-48264845 | None:intergenic | 30.0% | |
| TCACTAGAAAATGCAAAAAC+TGG | + | chr3_3:48264919-48264938 | None:intergenic | 30.0% | |
| !! | TTTTTGCATTTTCTAGTGAC+TGG | - | chr3_3:48264920-48264939 | Msa0455380:intron | 30.0% |
| ! | AATTATGCTGTTCAGGTTAA+AGG | + | chr3_3:48264950-48264969 | None:intergenic | 30.0% |
| !! | AATTTTGACCAACCAAGATT+GGG | - | chr3_3:48265058-48265077 | Msa0455380:intron | 30.0% |
| ATGTAACACAATCATGTTTG+AGG | + | chr3_3:48265172-48265191 | None:intergenic | 30.0% | |
| TCAAACATGATTGTGTTACA+TGG | - | chr3_3:48265171-48265190 | Msa0455380:intron | 30.0% | |
| ! | TTACATGGAGGTTAAGTTTT+GGG | - | chr3_3:48265186-48265205 | Msa0455380:intron | 30.0% |
| TTCAGCTAACAAATTTGATG+GGG | - | chr3_3:48265237-48265256 | Msa0455380:intron | 30.0% | |
| CACAATTTATTGTGTAGAAG+TGG | - | chr3_3:48265475-48265494 | Msa0455380:intron | 30.0% | |
| !! | AAGTCAATTGTTTTGTGGGT+TGG | - | chr3_3:48256690-48256709 | Msa0455380:three_prime_UTR | 35.0% |
| !! | AGTCAATTGTTTTGTGGGTT+GGG | - | chr3_3:48256691-48256710 | Msa0455380:three_prime_UTR | 35.0% |
| !!! | TTGTGGGTTGGGTAAATTTT+AGG | - | chr3_3:48256702-48256721 | Msa0455380:three_prime_UTR | 35.0% |
| !!! | TGTGGGTTGGGTAAATTTTA+GGG | - | chr3_3:48256703-48256722 | Msa0455380:three_prime_UTR | 35.0% |
| CCAAACAAAATTCTCAACAG+TGG | + | chr3_3:48256860-48256879 | None:intergenic | 35.0% | |
| ! | CCACTGTTGAGAATTTTGTT+TGG | - | chr3_3:48256857-48256876 | Msa0455380:three_prime_UTR | 35.0% |
| !!! | GGTGTTGTGATTTTTTTCTC+TGG | - | chr3_3:48256918-48256937 | Msa0455380:CDS | 35.0% |
| ACATCACAATTTACCTGAGA+TGG | + | chr3_3:48257006-48257025 | None:intergenic | 35.0% | |
| GTTGTTGCAAATTTCACTTG+AGG | - | chr3_3:48257041-48257060 | Msa0455380:intron | 35.0% | |
| !!! | TGTTTTGAGACTTCTGGTTA+TGG | - | chr3_3:48257305-48257324 | Msa0455380:intron | 35.0% |
| TATCTGAGCAAGATCAGTAT+GGG | - | chr3_3:48257459-48257478 | Msa0455380:intron | 35.0% | |
| ! | TCTAAGACTGATTCAAATGG+AGG | - | chr3_3:48257507-48257526 | Msa0455380:intron | 35.0% |
| AGTTGTTGAGAAGAAAGACT+TGG | - | chr3_3:48257557-48257576 | Msa0455380:intron | 35.0% | |
| GTTGTTGAGAAGAAAGACTT+GGG | - | chr3_3:48257558-48257577 | Msa0455380:intron | 35.0% | |
| GAGGATAAGAAAGATGAAGA+TGG | - | chr3_3:48257690-48257709 | Msa0455380:intron | 35.0% | |
| GGATAAGAAAGATGAAGATG+GGG | - | chr3_3:48257692-48257711 | Msa0455380:intron | 35.0% | |
| AGACAAAAAGAAAGACGATG+TGG | - | chr3_3:48257797-48257816 | Msa0455380:CDS | 35.0% | |
| AGAGGATAAGAAAGACGATA+TGG | - | chr3_3:48257833-48257852 | Msa0455380:CDS | 35.0% | |
| AAAGAGGAGAAGAAAGATGA+TGG | - | chr3_3:48257903-48257922 | Msa0455380:CDS | 35.0% | |
| AAGAGGAGAAGAAAGATGAT+GGG | - | chr3_3:48257904-48257923 | Msa0455380:CDS | 35.0% | |
| GGAAGAAGTAAAAGATGAGA+TGG | - | chr3_3:48258001-48258020 | Msa0455380:intron | 35.0% | |
| AAAGATGAGATGGAAGTTGA+TGG | - | chr3_3:48258011-48258030 | Msa0455380:intron | 35.0% | |
| TGACATCCAAGAAATTGAAG+AGG | - | chr3_3:48258067-48258086 | Msa0455380:intron | 35.0% | |
| TGTCATCCTCTTCAATTTCT+TGG | + | chr3_3:48258076-48258095 | None:intergenic | 35.0% | |
| AAAGGAAAAAGAAGATGCAG+AGG | - | chr3_3:48258172-48258191 | Msa0455380:intron | 35.0% | |
| AAGGAAAAAGAAGATGCAGA+GGG | - | chr3_3:48258173-48258192 | Msa0455380:intron | 35.0% | |
| ! | TAGTATTGAGGAGAAAGAAG+AGG | - | chr3_3:48258196-48258215 | Msa0455380:intron | 35.0% |
| ! | AGTATTGAGGAGAAAGAAGA+GGG | - | chr3_3:48258197-48258216 | Msa0455380:intron | 35.0% |
| AAAAGAAGAAGATAAGGCAG+AGG | - | chr3_3:48258379-48258398 | Msa0455380:CDS | 35.0% | |
| AAAGAAGAAGATAAGGCAGA+GGG | - | chr3_3:48258380-48258399 | Msa0455380:CDS | 35.0% | |
| ! | TCTCAACTGATTTCCTTTCT+CGG | + | chr3_3:48258529-48258548 | None:intergenic | 35.0% |
| AAGGAAATCAGTTGAGAGAT+TGG | - | chr3_3:48258532-48258551 | Msa0455380:intron | 35.0% | |
| AATCGATAAAGATGCAACCA+AGG | - | chr3_3:48258562-48258581 | Msa0455380:CDS | 35.0% | |
| CTTTGCAATGTGTAATTCCT+TGG | + | chr3_3:48258582-48258601 | None:intergenic | 35.0% | |
| CAAGGAATTACACATTGCAA+AGG | - | chr3_3:48258580-48258599 | Msa0455380:CDS | 35.0% | |
| ! | CAGTTTCCTTTTCAATTTGC+AGG | - | chr3_3:48258676-48258695 | Msa0455380:CDS | 35.0% |
| !! | TATCTTTTAAAGGTGTGCCA+CGG | + | chr3_3:48258703-48258722 | None:intergenic | 35.0% |
| !! | AAGAGAAGCATCATACCATT+AGG | + | chr3_3:48258728-48258747 | None:intergenic | 35.0% |
| TAGTAAGCAAAAGTTAGCTG+AGG | - | chr3_3:48258811-48258830 | Msa0455380:CDS | 35.0% | |
| AGTAAGCAAAAGTTAGCTGA+GGG | - | chr3_3:48258812-48258831 | Msa0455380:CDS | 35.0% | |
| TAGTACAAGCAAGACAGTAT+TGG | - | chr3_3:48258858-48258877 | Msa0455380:CDS | 35.0% | |
| AACACCATCTCATTGAAATG+CGG | + | chr3_3:48259305-48259324 | None:intergenic | 35.0% | |
| ! | GTTTTACCTGTTCAAAGTTG+TGG | - | chr3_3:48259322-48259341 | Msa0455380:intron | 35.0% |
| !! | AGAAGTGAATTCTGAGACTA+CGG | + | chr3_3:48259360-48259379 | None:intergenic | 35.0% |
| TGGTCTCAAAACGACTTAAA+TGG | - | chr3_3:48259541-48259560 | Msa0455380:intron | 35.0% | |
| GGTCTCAAAACGACTTAAAT+GGG | - | chr3_3:48259542-48259561 | Msa0455380:intron | 35.0% | |
| ACAAATTAATAGTGCTGCCT+CGG | + | chr3_3:48259571-48259590 | None:intergenic | 35.0% | |
| AACATCCAGCAACATACTTT+GGG | + | chr3_3:48259614-48259633 | None:intergenic | 35.0% | |
| AAACATCCAGCAACATACTT+TGG | + | chr3_3:48259615-48259634 | None:intergenic | 35.0% | |
| TGTTCACAAAACTTTCAACG+TGG | - | chr3_3:48259671-48259690 | Msa0455380:intron | 35.0% | |
| GTTCACAAAACTTTCAACGT+GGG | - | chr3_3:48259672-48259691 | Msa0455380:intron | 35.0% | |
| ACTCTTGAAGTATGTACGTT+GGG | + | chr3_3:48259909-48259928 | None:intergenic | 35.0% | |
| AACTCTTGAAGTATGTACGT+TGG | + | chr3_3:48259910-48259929 | None:intergenic | 35.0% | |
| CTAAAAAACTCCCACATATC+AGG | + | chr3_3:48259981-48260000 | None:intergenic | 35.0% | |
| ! | TGGCATTTAAGTTATCCAGA+AGG | - | chr3_3:48260083-48260102 | Msa0455380:intron | 35.0% |
| TTCATACAATCCTCTTTGGA+AGG | - | chr3_3:48260131-48260150 | Msa0455380:intron | 35.0% | |
| !!! | AGATCAGGATTTTTGGGTTA+TGG | - | chr3_3:48260262-48260281 | Msa0455380:intron | 35.0% |
| !!! | TGAGGTTTTCTGGTTTTGTA+TGG | - | chr3_3:48260367-48260386 | Msa0455380:intron | 35.0% |
| ! | TTTTGTATGGCATGACAATG+AGG | - | chr3_3:48260380-48260399 | Msa0455380:intron | 35.0% |
| ACAAAAAAAAAAGGGCAACC+CGG | + | chr3_3:48260559-48260578 | None:intergenic | 35.0% | |
| GTGTAACAAAGAGAAGTTAC+TGG | - | chr3_3:48260656-48260675 | Msa0455380:intron | 35.0% | |
| !! | ACAAACCTTTGTTGTTGACT+TGG | + | chr3_3:48260712-48260731 | None:intergenic | 35.0% |
| AGTCAACAACAAAGGTTTGT+TGG | - | chr3_3:48260712-48260731 | Msa0455380:intron | 35.0% | |
| !!! | CAAACACACTTATTTTGGGA+CGG | + | chr3_3:48260786-48260805 | None:intergenic | 35.0% |
| CAAAGGTTAAAGATGTGCAT+TGG | - | chr3_3:48260947-48260966 | Msa0455380:intron | 35.0% | |
| !! | CAAGGTCATGTATTTTGAGA+CGG | - | chr3_3:48260988-48261007 | Msa0455380:intron | 35.0% |
| ! | CATTGATAACCTGGTATTCA+TGG | + | chr3_3:48261615-48261634 | None:intergenic | 35.0% |
| CGGGGAAAAAGAAAAAAAAG+AGG | + | chr3_3:48261905-48261924 | None:intergenic | 35.0% | |
| CAATCAGTTTAGGTCTTTCT+AGG | + | chr3_3:48261948-48261967 | None:intergenic | 35.0% | |
| CTAGAAAGACCTAAACTGAT+TGG | - | chr3_3:48261946-48261965 | Msa0455380:intron | 35.0% | |
| ACAAGCAGAGAAGGAAAAAT+TGG | + | chr3_3:48261995-48262014 | None:intergenic | 35.0% | |
| GTATGGTTATGTCGAAGTTT+AGG | + | chr3_3:48262236-48262255 | None:intergenic | 35.0% | |
| ! | ACAATATCTTTTCACTCGGT+AGG | + | chr3_3:48262431-48262450 | None:intergenic | 35.0% |
| TACCGAGTGAAAAGATATTG+TGG | - | chr3_3:48262430-48262449 | Msa0455380:intron | 35.0% | |
| ! | GTCCACAATATCTTTTCACT+CGG | + | chr3_3:48262435-48262454 | None:intergenic | 35.0% |
| GATAGATATTGAGTGGTTGT+GGG | + | chr3_3:48262709-48262728 | None:intergenic | 35.0% | |
| GTCATTGGATAGATATTGAG+TGG | + | chr3_3:48262716-48262735 | None:intergenic | 35.0% | |
| ! | GTTGATGAAATGTAAGGATG+AGG | - | chr3_3:48262975-48262994 | Msa0455380:intron | 35.0% |
| !! | TTTTGGAGATGTTGCATTGA+AGG | - | chr3_3:48263026-48263045 | Msa0455380:intron | 35.0% |
| GCCAACTCGTAATTTGATAT+TGG | - | chr3_3:48263121-48263140 | Msa0455380:intron | 35.0% | |
| ! | CCTCTTCTTATTTCTCAACT+CGG | - | chr3_3:48263226-48263245 | Msa0455380:intron | 35.0% |
| ! | CTCTTCTTATTTCTCAACTC+GGG | - | chr3_3:48263227-48263246 | Msa0455380:intron | 35.0% |
| ! | TCTTCTTATTTCTCAACTCG+GGG | - | chr3_3:48263228-48263247 | Msa0455380:intron | 35.0% |
| AAATGAAGATTCTTCAGGAG+TGG | - | chr3_3:48263277-48263296 | Msa0455380:intron | 35.0% | |
| GTTTCATCTTCAGATTTCTC+AGG | + | chr3_3:48263389-48263408 | None:intergenic | 35.0% | |
| ! | TCTTCCTTTTCAGATTTCTG+TGG | + | chr3_3:48263413-48263432 | None:intergenic | 35.0% |
| !! | TTTGCAGATGATGTTTTGGA+GGG | + | chr3_3:48263485-48263504 | None:intergenic | 35.0% |
| TGATATGGATGAAAGTCCAA+AGG | - | chr3_3:48263622-48263641 | Msa0455380:intron | 35.0% | |
| ! | AGTTTTCTCTTTGGACTTTG+AGG | + | chr3_3:48263720-48263739 | None:intergenic | 35.0% |
| TCAAAGTCCAAAGAGAAAAC+TGG | - | chr3_3:48263719-48263738 | Msa0455380:CDS | 35.0% | |
| ! | CTTCTTACCAGTTTTCTCTT+TGG | + | chr3_3:48263729-48263748 | None:intergenic | 35.0% |
| ! | CTTTGTGTTCTAAGCAGAAA+AGG | - | chr3_3:48263861-48263880 | Msa0455380:CDS | 35.0% |
| CTAAGCAGAAAAGGTTACTA+AGG | - | chr3_3:48263870-48263889 | Msa0455380:CDS | 35.0% | |
| GAAAAGGTTACTAAGGGAAA+AGG | - | chr3_3:48263877-48263896 | Msa0455380:CDS | 35.0% | |
| !!! | GCTTTTTTATCAAGCTGTCA+AGG | + | chr3_3:48264116-48264135 | None:intergenic | 35.0% |
| ACAGCTTGATAAAAAAGCCT+AGG | - | chr3_3:48264118-48264137 | Msa0455380:CDS | 35.0% | |
| CATTTCCACCAATTCATGTA+TGG | - | chr3_3:48264201-48264220 | Msa0455380:CDS | 35.0% | |
| CATATCCATACATGAATTGG+TGG | + | chr3_3:48264209-48264228 | None:intergenic | 35.0% | |
| TTACAACGGCATCATATAGT+TGG | + | chr3_3:48264382-48264401 | None:intergenic | 35.0% | |
| CTGATCTACTCTTCTTACAA+CGG | + | chr3_3:48264396-48264415 | None:intergenic | 35.0% | |
| TGTAAGAAGAGTAGATCAGA+TGG | - | chr3_3:48264397-48264416 | Msa0455380:CDS | 35.0% | |
| TTTGCGAATGGTTTCTCTAA+TGG | + | chr3_3:48264465-48264484 | None:intergenic | 35.0% | |
| AACCATTCGCAAAGATTTAG+AGG | - | chr3_3:48264472-48264491 | Msa0455380:CDS | 35.0% | |
| AGATTTAGAGGTCAATGAGT+TGG | - | chr3_3:48264484-48264503 | Msa0455380:CDS | 35.0% | |
| ! | CAATGAGTTGGATCCAAATA+CGG | - | chr3_3:48264496-48264515 | Msa0455380:CDS | 35.0% |
| ! | CGGTTTTTGATAGAACACTA+TGG | - | chr3_3:48264516-48264535 | Msa0455380:CDS | 35.0% |
| GTATATGATTCCTTCACTAG+TGG | - | chr3_3:48264604-48264623 | Msa0455380:CDS | 35.0% | |
| TTTCAGAATGTCGGTAAATG+TGG | + | chr3_3:48264763-48264782 | None:intergenic | 35.0% | |
| TACTGCAAATTATGCTGTTC+AGG | + | chr3_3:48264957-48264976 | None:intergenic | 35.0% | |
| CAAAGAAACTAAATGCGTTC+AGG | + | chr3_3:48265023-48265042 | None:intergenic | 35.0% | |
| !! | CAATTTTGACCAACCAAGAT+TGG | - | chr3_3:48265057-48265076 | Msa0455380:intron | 35.0% |
| AACATGATTGTGTTACATGG+AGG | - | chr3_3:48265174-48265193 | Msa0455380:intron | 35.0% | |
| ! | GTTACATGGAGGTTAAGTTT+TGG | - | chr3_3:48265185-48265204 | Msa0455380:intron | 35.0% |
| !!! | CTTGATAGCTGACTTTTTTG+GGG | + | chr3_3:48265269-48265288 | None:intergenic | 35.0% |
| !!! | GCTTGATAGCTGACTTTTTT+GGG | + | chr3_3:48265270-48265289 | None:intergenic | 35.0% |
| !!! | AGCTTGATAGCTGACTTTTT+TGG | + | chr3_3:48265271-48265290 | None:intergenic | 35.0% |
| !! | GTTTGTTGTTCTCTTCAGAT+TGG | + | chr3_3:48265532-48265551 | None:intergenic | 35.0% |
| ! | CATAATTTAGTGCAGCCTTT+TGG | - | chr3_3:48265563-48265582 | Msa0455380:intron | 35.0% |
| GTACACAATAAACTACATGC+TGG | + | chr3_3:48265601-48265620 | None:intergenic | 35.0% | |
| ! | TTTGAAGTTGACACCTTTCT+GGG | - | chr3_3:48265691-48265710 | Msa0455380:five_prime_UTR | 35.0% |
| ! | AGTTTTGCATTGTAACCTCG+AGG | - | chr3_3:48257082-48257101 | Msa0455380:intron | 40.0% |
| ! | ATTTTACAACCGGACCGTAA+GGG | + | chr3_3:48257123-48257142 | None:intergenic | 40.0% |
| ACTCAGTTCAATCGAACAAC+TGG | + | chr3_3:48257412-48257431 | None:intergenic | 40.0% | |
| TTGTTCGATTGAACTGAGTG+TGG | - | chr3_3:48257413-48257432 | Msa0455380:intron | 40.0% | |
| CTATCTGAGCAAGATCAGTA+TGG | - | chr3_3:48257458-48257477 | Msa0455380:intron | 40.0% | |
| ACTTCCCCTAATGATTTCAC+CGG | + | chr3_3:48257540-48257559 | None:intergenic | 40.0% | |
| AAGAAAGACTTGGGAACTGA+TGG | - | chr3_3:48257567-48257586 | Msa0455380:intron | 40.0% | |
| AGATAAGAAAGTTGAGGGTG+TGG | - | chr3_3:48257656-48257675 | Msa0455380:intron | 40.0% | |
| TAAGAAAGATGAAGATGGGG+TGG | - | chr3_3:48257695-48257714 | Msa0455380:intron | 40.0% | |
| AAGAAAGATGAAGATGGGGT+GGG | - | chr3_3:48257696-48257715 | Msa0455380:intron | 40.0% | |
| AAAGAGGATAAGAAAGCCGA+TGG | - | chr3_3:48257726-48257745 | Msa0455380:intron | 40.0% | |
| AAGAGGATAAGAAAGCCGAT+GGG | - | chr3_3:48257727-48257746 | Msa0455380:intron | 40.0% | |
| AGAGGATAAGAAAGGTGATG+TGG | - | chr3_3:48257764-48257783 | Msa0455380:CDS | 40.0% | |
| CAAAAAGAAAGACGATGTGG+TGG | - | chr3_3:48257800-48257819 | Msa0455380:CDS | 40.0% | |
| ! | TGTGGTGGAAGAAGTAAAAG+AGG | - | chr3_3:48257815-48257834 | Msa0455380:CDS | 40.0% |
| GGATAAGAAAGACGATATGG+TGG | - | chr3_3:48257836-48257855 | Msa0455380:CDS | 40.0% | |
| ! | TATGGTGGAAGAAGTGAAAG+AGG | - | chr3_3:48257851-48257870 | Msa0455380:CDS | 40.0% |
| AAAGAGGAGAAGAAAGACGA+AGG | - | chr3_3:48257867-48257886 | Msa0455380:CDS | 40.0% | |
| AAGAGGAGAAGAAAGACGAA+GGG | - | chr3_3:48257868-48257887 | Msa0455380:CDS | 40.0% | |
| AGAGGAGAAGAAAGATGATG+GGG | - | chr3_3:48257905-48257924 | Msa0455380:CDS | 40.0% | |
| ! | TGATGGTGCAGATGAAGTAA+AGG | - | chr3_3:48257956-48257975 | Msa0455380:intron | 40.0% |
| GAAAATGGATGTTGATGCTG+AGG | - | chr3_3:48258121-48258140 | Msa0455380:intron | 40.0% | |
| GAAAGAAGAGGGTAATGATG+AGG | - | chr3_3:48258208-48258227 | Msa0455380:intron | 40.0% | |
| TGAGGAGAAAACTGAAGTAG+AGG | - | chr3_3:48258226-48258245 | Msa0455380:intron | 40.0% | |
| GAAAACTGAAGTAGAGGAGA+AGG | - | chr3_3:48258232-48258251 | Msa0455380:intron | 40.0% | |
| GAAATCTGAAGAAGAGACAG+AGG | - | chr3_3:48258274-48258293 | Msa0455380:intron | 40.0% | |
| CTCAACTACAAGATTGAGTG+CGG | - | chr3_3:48259171-48259190 | Msa0455380:intron | 40.0% | |
| AAGACCGCATTTCAATGAGA+TGG | - | chr3_3:48259298-48259317 | Msa0455380:intron | 40.0% | |
| TGTATGCCACAACTTTGAAC+AGG | + | chr3_3:48259331-48259350 | None:intergenic | 40.0% | |
| !! | TGAATTCTGAGACTACGGTT+GGG | + | chr3_3:48259355-48259374 | None:intergenic | 40.0% |
| AGTCTCAGAATTCACTTCTG+CGG | - | chr3_3:48259361-48259380 | Msa0455380:intron | 40.0% | |
| !! | ATCCCATTACTGTTTGCTGT+TGG | - | chr3_3:48259778-48259797 | Msa0455380:intron | 40.0% |
| !! | TCCCATTACTGTTTGCTGTT+GGG | - | chr3_3:48259779-48259798 | Msa0455380:intron | 40.0% |
| ACCCAACAGCAAACAGTAAT+GGG | + | chr3_3:48259783-48259802 | None:intergenic | 40.0% | |
| AACCCAACAGCAAACAGTAA+TGG | + | chr3_3:48259784-48259803 | None:intergenic | 40.0% | |
| TCTTGAAGTATGTACGTTGG+GGG | + | chr3_3:48259907-48259926 | None:intergenic | 40.0% | |
| CTCTTGAAGTATGTACGTTG+GGG | + | chr3_3:48259908-48259927 | None:intergenic | 40.0% | |
| TTCAAGAGTTGCGTGATATG+TGG | - | chr3_3:48259920-48259939 | Msa0455380:intron | 40.0% | |
| TCAAGAGTTGCGTGATATGT+GGG | - | chr3_3:48259921-48259940 | Msa0455380:intron | 40.0% | |
| AGTGAAGTTGACCTGATATG+TGG | - | chr3_3:48259967-48259986 | Msa0455380:intron | 40.0% | |
| GTGAAGTTGACCTGATATGT+GGG | - | chr3_3:48259968-48259987 | Msa0455380:intron | 40.0% | |
| ACTATCATCAGTCTTCCTTC+TGG | + | chr3_3:48260101-48260120 | None:intergenic | 40.0% | |
| TAATCCTTTGCAGGCATTTC+AGG | - | chr3_3:48260329-48260348 | Msa0455380:intron | 40.0% | |
| AACAGCCTCTTGTGTAAAAC+AGG | - | chr3_3:48260461-48260480 | Msa0455380:intron | 40.0% | |
| ACAGCCTCTTGTGTAAAACA+GGG | - | chr3_3:48260462-48260481 | Msa0455380:intron | 40.0% | |
| ! | CTTACCCTGTTTTACACAAG+AGG | + | chr3_3:48260469-48260488 | None:intergenic | 40.0% |
| CTCTTGTGTAAAACAGGGTA+AGG | - | chr3_3:48260467-48260486 | Msa0455380:intron | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | - | chr3_3:48260493-48260512 | Msa0455380:intron | 40.0% | |
| CATTGCTGATGTTCTTGTTG+TGG | - | chr3_3:48260743-48260762 | Msa0455380:intron | 40.0% | |
| !!! | GTCATGTATTTTGAGACGGA+GGG | - | chr3_3:48260992-48261011 | Msa0455380:CDS | 40.0% |
| CATACCAAAGCATGAACATG+CGG | + | chr3_3:48261036-48261055 | None:intergenic | 40.0% | |
| CTTTGGTATGTGTATGCACA+GGG | - | chr3_3:48261046-48261065 | Msa0455380:CDS | 40.0% | |
| TTTGGTATGTGTATGCACAG+GGG | - | chr3_3:48261047-48261066 | Msa0455380:CDS | 40.0% | |
| CTGCATAGCCAGAAATTCAT+TGG | + | chr3_3:48261194-48261213 | None:intergenic | 40.0% | |
| !! | CAATGAATTTCTGGCTATGC+AGG | - | chr3_3:48261192-48261211 | Msa0455380:intron | 40.0% |
| !! | TACTTCAAGAGGTTCTGGAA+AGG | - | chr3_3:48261471-48261490 | Msa0455380:intron | 40.0% |
| AGAGAGCAAGACAAGCATAA+AGG | + | chr3_3:48261560-48261579 | None:intergenic | 40.0% | |
| !!! | TGTGTTTTGGCTGCAATTCA+GGG | + | chr3_3:48261806-48261825 | None:intergenic | 40.0% |
| ATCCAAAAAGCAAAAACGCC+GGG | + | chr3_3:48261924-48261943 | None:intergenic | 40.0% | |
| GATCCAAAAAGCAAAAACGC+CGG | + | chr3_3:48261925-48261944 | None:intergenic | 40.0% | |
| !!! | CGGCCTGGTTTTTAAAACAT+TGG | + | chr3_3:48262025-48262044 | None:intergenic | 40.0% |
| AGTCACACCAGTTCAATCTA+CGG | + | chr3_3:48262045-48262064 | None:intergenic | 40.0% | |
| TAGATTGAACTGGTGTGACT+GGG | - | chr3_3:48262045-48262064 | Msa0455380:intron | 40.0% | |
| AAACACTATTGCGGTGTAGT+GGG | + | chr3_3:48262264-48262283 | None:intergenic | 40.0% | |
| AAAACACTATTGCGGTGTAG+TGG | + | chr3_3:48262265-48262284 | None:intergenic | 40.0% | |
| CAACCAGCAAAACACTATTG+CGG | + | chr3_3:48262273-48262292 | None:intergenic | 40.0% | |
| GGATAGATATTGAGTGGTTG+TGG | + | chr3_3:48262710-48262729 | None:intergenic | 40.0% | |
| AGAGTAAAGAAAGGGGAAAG+TGG | + | chr3_3:48262738-48262757 | None:intergenic | 40.0% | |
| !! | CATTTTTGGGAGTAGCTCAT+AGG | - | chr3_3:48262846-48262865 | Msa0455380:intron | 40.0% |
| AGATGTTGCATTGAAGGTTG+TGG | - | chr3_3:48263032-48263051 | Msa0455380:intron | 40.0% | |
| ! | CCGAGTTGAGAAATAAGAAG+AGG | + | chr3_3:48263229-48263248 | None:intergenic | 40.0% |
| TGACACAGAAGATGAATCAG+AGG | - | chr3_3:48263316-48263335 | Msa0455380:intron | 40.0% | |
| GACACAGAAGATGAATCAGA+GGG | - | chr3_3:48263317-48263336 | Msa0455380:intron | 40.0% | |
| AACGCCACAGAAATCTGAAA+AGG | - | chr3_3:48263406-48263425 | Msa0455380:intron | 40.0% | |
| AAGGAAGATAAGAGTGATCC+CGG | - | chr3_3:48263425-48263444 | Msa0455380:intron | 40.0% | |
| !! | CTTTGCAGATGATGTTTTGG+AGG | + | chr3_3:48263486-48263505 | None:intergenic | 40.0% |
| GATTTCTTAGGTGCTCTCTT+AGG | + | chr3_3:48263575-48263594 | None:intergenic | 40.0% | |
| ATCATCATCGGACTTTGGTT+TGG | + | chr3_3:48263606-48263625 | None:intergenic | 40.0% | |
| ACCAAAGTCCGATGATGATA+TGG | - | chr3_3:48263607-48263626 | Msa0455380:intron | 40.0% | |
| TCCATATCATCATCGGACTT+TGG | + | chr3_3:48263611-48263630 | None:intergenic | 40.0% | |
| AGGAAGAAGAAAAGTGAGCA+AGG | - | chr3_3:48263653-48263672 | Msa0455380:intron | 40.0% | |
| GGAAGAAGAAAAGTGAGCAA+GGG | - | chr3_3:48263654-48263673 | Msa0455380:intron | 40.0% | |
| GAAGAAGAAAAGTGAGCAAG+GGG | - | chr3_3:48263655-48263674 | Msa0455380:intron | 40.0% | |
| AAGAAGAAAAGTGAGCAAGG+GGG | - | chr3_3:48263656-48263675 | Msa0455380:intron | 40.0% | |
| ! | TTTGGACTTTGAGGAAGACT+TGG | + | chr3_3:48263711-48263730 | None:intergenic | 40.0% |
| AGGCAAAGATGTCTTAACCT+AGG | + | chr3_3:48264138-48264157 | None:intergenic | 40.0% | |
| AAGAAGAGTAGATCAGATGG+AGG | - | chr3_3:48264400-48264419 | Msa0455380:CDS | 40.0% | |
| AGTCAGGTTAAAAGAGGTAG+AGG | - | chr3_3:48264425-48264444 | Msa0455380:CDS | 40.0% | |
| GACCTCTAAATCTTTGCGAA+TGG | + | chr3_3:48264477-48264496 | None:intergenic | 40.0% | |
| !! | ACCGACATTCTGAAACTACT+CGG | - | chr3_3:48264768-48264787 | Msa0455380:CDS | 40.0% |
| ACCGAGTAGTTTCAGAATGT+CGG | + | chr3_3:48264772-48264791 | None:intergenic | 40.0% | |
| ACCAAGGTTCAAATGTCAGT+TGG | - | chr3_3:48265115-48265134 | Msa0455380:intron | 40.0% | |
| CCAAGGTTCAAATGTCAGTT+GGG | - | chr3_3:48265116-48265135 | Msa0455380:intron | 40.0% | |
| CAAGGTTCAAATGTCAGTTG+GGG | - | chr3_3:48265117-48265136 | Msa0455380:intron | 40.0% | |
| AAGGTTCAAATGTCAGTTGG+GGG | - | chr3_3:48265118-48265137 | Msa0455380:intron | 40.0% | |
| ACAATCAACAGTCAGGCTTA+AGG | + | chr3_3:48265392-48265411 | None:intergenic | 40.0% | |
| ! | TTAAGCCTGACTGTTGATTG+TGG | - | chr3_3:48265391-48265410 | Msa0455380:intron | 40.0% |
| CTAATCCACAATCAACAGTC+AGG | + | chr3_3:48265399-48265418 | None:intergenic | 40.0% | |
| GTTGTTCTCTTCAGATTGGA+TGG | + | chr3_3:48265528-48265547 | None:intergenic | 40.0% | |
| ! | ATTTAGTGCAGCCTTTTGGT+TGG | - | chr3_3:48265567-48265586 | Msa0455380:intron | 40.0% |
| !! | TTTAGTGCAGCCTTTTGGTT+GGG | - | chr3_3:48265568-48265587 | Msa0455380:intron | 40.0% |
| !! | CAGAAAGGTGTCAACTTCAA+AGG | + | chr3_3:48265692-48265711 | None:intergenic | 40.0% |
| !! | CTTTGAAGTTGACACCTTTC+TGG | - | chr3_3:48265690-48265709 | Msa0455380:five_prime_UTR | 40.0% |
| GCAAATTTCACTTGAGGTGC+TGG | - | chr3_3:48257047-48257066 | Msa0455380:intron | 45.0% | |
| GCTGAGTTCAAATCCCCTTA+CGG | - | chr3_3:48257106-48257125 | Msa0455380:intron | 45.0% | |
| ! | TTTTACAACCGGACCGTAAG+GGG | + | chr3_3:48257122-48257141 | None:intergenic | 45.0% |
| ! | CATTTTACAACCGGACCGTA+AGG | + | chr3_3:48257124-48257143 | None:intergenic | 45.0% |
| GCACGCCATTTACAACAGAA+GGG | + | chr3_3:48257273-48257292 | None:intergenic | 45.0% | |
| AGCACGCCATTTACAACAGA+AGG | + | chr3_3:48257274-48257293 | None:intergenic | 45.0% | |
| TCTGTTGTAAATGGCGTGCT+AGG | - | chr3_3:48257274-48257293 | Msa0455380:intron | 45.0% | |
| CTGTTGTAAATGGCGTGCTA+GGG | - | chr3_3:48257275-48257294 | Msa0455380:intron | 45.0% | |
| TTCGATTGAACTGAGTGTGG+TGG | - | chr3_3:48257416-48257435 | Msa0455380:intron | 45.0% | |
| TTCAAATGGAGGTAGCGTTC+CGG | - | chr3_3:48257518-48257537 | Msa0455380:intron | 45.0% | |
| AGCGTTCCGGTGAAATCATT+AGG | - | chr3_3:48257531-48257550 | Msa0455380:intron | 45.0% | |
| GCGTTCCGGTGAAATCATTA+GGG | - | chr3_3:48257532-48257551 | Msa0455380:intron | 45.0% | |
| CGTTCCGGTGAAATCATTAG+GGG | - | chr3_3:48257533-48257552 | Msa0455380:intron | 45.0% | |
| AAAGACTTGGGAACTGATGG+AGG | - | chr3_3:48257570-48257589 | Msa0455380:intron | 45.0% | |
| AAGACTTGGGAACTGATGGA+GGG | - | chr3_3:48257571-48257590 | Msa0455380:intron | 45.0% | |
| AACTGATGGAGGGAAAGTCT+TGG | - | chr3_3:48257581-48257600 | Msa0455380:intron | 45.0% | |
| GGGAAAGTCTTGGAGAGTAA+CGG | - | chr3_3:48257591-48257610 | Msa0455380:intron | 45.0% | |
| ! | GAAAGTTGAGGGTGTGGAAA+AGG | - | chr3_3:48257662-48257681 | Msa0455380:intron | 45.0% |
| AGAGGATAAGAAAGCCGATG+GGG | - | chr3_3:48257728-48257747 | Msa0455380:intron | 45.0% | |
| ! | TTTTACTTCATCGCCCCCAT+CGG | + | chr3_3:48257745-48257764 | None:intergenic | 45.0% |
| AGAGGAGAAGAAAGACGAAG+GGG | - | chr3_3:48257869-48257888 | Msa0455380:CDS | 45.0% | |
| AGGGGCTGATGAAGTAAAAG+AGG | - | chr3_3:48257887-48257906 | Msa0455380:CDS | 45.0% | |
| TGGTGCAGATGAAGTAAAGG+TGG | - | chr3_3:48257959-48257978 | Msa0455380:intron | 45.0% | |
| GGATGTTGATGCTGAGGTTA+AGG | - | chr3_3:48258127-48258146 | Msa0455380:intron | 45.0% | |
| AGATGCAGAGGGTAGTATTG+AGG | - | chr3_3:48258184-48258203 | Msa0455380:intron | 45.0% | |
| GAAGTAGAGGAGAAGGAAGA+AGG | - | chr3_3:48258239-48258258 | Msa0455380:intron | 45.0% | |
| TGAAGAAGAGACAGAGGAGA+AGG | - | chr3_3:48258280-48258299 | Msa0455380:intron | 45.0% | |
| GGAGAAAACTGAAGCAGAGA+CGG | - | chr3_3:48258319-48258338 | Msa0455380:CDS | 45.0% | |
| ! | GATCAAAAAAGCGTGCCAGA+GGG | - | chr3_3:48258420-48258439 | Msa0455380:intron | 45.0% |
| TGCCAGAGGGAAGGTTAATA+AGG | - | chr3_3:48258433-48258452 | Msa0455380:intron | 45.0% | |
| CTCCTTATTAACCTTCCCTC+TGG | + | chr3_3:48258438-48258457 | None:intergenic | 45.0% | |
| CGATCACTAGTTGGAGTCTT+TGG | + | chr3_3:48258500-48258519 | None:intergenic | 45.0% | |
| CTGATTTCCTTTCTCGGACT+GGG | + | chr3_3:48258523-48258542 | None:intergenic | 45.0% | |
| ! | ACTGATTTCCTTTCTCGGAC+TGG | + | chr3_3:48258524-48258543 | None:intergenic | 45.0% |
| CGCACTCAATCTTGTAGTTG+AGG | + | chr3_3:48259173-48259192 | None:intergenic | 45.0% | |
| !! | GAATTCTGAGACTACGGTTG+GGG | + | chr3_3:48259354-48259373 | None:intergenic | 45.0% |
| !! | GTGAATTCTGAGACTACGGT+TGG | + | chr3_3:48259356-48259375 | None:intergenic | 45.0% |
| !!! | CGTTTTGAGACCAGCTAAGT+GGG | + | chr3_3:48259534-48259553 | None:intergenic | 45.0% |
| !!! | TCGTTTTGAGACCAGCTAAG+TGG | + | chr3_3:48259535-48259554 | None:intergenic | 45.0% |
| ACGACTTAAATGGGTAACCG+AGG | - | chr3_3:48259551-48259570 | Msa0455380:intron | 45.0% | |
| ! | CCAGCAACATACTTTGGGAA+TGG | + | chr3_3:48259609-48259628 | None:intergenic | 45.0% |
| CCATTCCCAAAGTATGTTGC+TGG | - | chr3_3:48259606-48259625 | Msa0455380:intron | 45.0% | |
| CGTGGGACTAATGTAACTGT+TGG | - | chr3_3:48259689-48259708 | Msa0455380:intron | 45.0% | |
| ! | ACGTTGGGGGTATACATAGT+CGG | + | chr3_3:48259894-48259913 | None:intergenic | 45.0% |
| CAAGAGTTGCGTGATATGTG+GGG | - | chr3_3:48259922-48259941 | Msa0455380:intron | 45.0% | |
| AAGAGTTGCGTGATATGTGG+GGG | - | chr3_3:48259923-48259942 | Msa0455380:intron | 45.0% | |
| ! | ACAATCCTCTTTGGAAGGAG+AGG | - | chr3_3:48260136-48260155 | Msa0455380:intron | 45.0% |
| ! | CAATCCTCTTTGGAAGGAGA+GGG | - | chr3_3:48260137-48260156 | Msa0455380:intron | 45.0% |
| TTGACCTGAAATGCCTGCAA+AGG | + | chr3_3:48260336-48260355 | None:intergenic | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | - | chr3_3:48260489-48260508 | Msa0455380:intron | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | - | chr3_3:48260492-48260511 | Msa0455380:intron | 45.0% | |
| !!! | CACACTTATTTTGGGACGGA+GGG | + | chr3_3:48260782-48260801 | None:intergenic | 45.0% |
| !!! | ACACACTTATTTTGGGACGG+AGG | + | chr3_3:48260783-48260802 | None:intergenic | 45.0% |
| TATGTGTGCAACAGTCGACA+AGG | - | chr3_3:48260970-48260989 | Msa0455380:intron | 45.0% | |
| !!! | GGTCATGTATTTTGAGACGG+AGG | - | chr3_3:48260991-48261010 | Msa0455380:CDS | 45.0% |
| GCTTTGGTATGTGTATGCAC+AGG | - | chr3_3:48261045-48261064 | Msa0455380:CDS | 45.0% | |
| TGTGGTGCTTGCAGAAAAAG+AGG | - | chr3_3:48261270-48261289 | Msa0455380:intron | 45.0% | |
| ! | ATCAGTCAAGCAAGAAGCGT+AGG | - | chr3_3:48261407-48261426 | Msa0455380:intron | 45.0% |
| GCAAGTACTTCAAGAGGTTC+TGG | - | chr3_3:48261466-48261485 | Msa0455380:intron | 45.0% | |
| ! | GTTTTCCTCCCATGAATACC+AGG | - | chr3_3:48261603-48261622 | Msa0455380:CDS | 45.0% |
| GATAACCTGGTATTCATGGG+AGG | + | chr3_3:48261611-48261630 | None:intergenic | 45.0% | |
| TGTGGCATACAGCTGTGTAA+TGG | - | chr3_3:48261723-48261742 | Msa0455380:intron | 45.0% | |
| !!! | CTGTGTTTTGGCTGCAATTC+AGG | + | chr3_3:48261807-48261826 | None:intergenic | 45.0% |
| CATCACAGTAGTAGCTGGTT+TGG | + | chr3_3:48261859-48261878 | None:intergenic | 45.0% | |
| CAAACCAGCTACTACTGTGA+TGG | - | chr3_3:48261857-48261876 | Msa0455380:intron | 45.0% | |
| TCCAAAAAGCAAAAACGCCG+GGG | + | chr3_3:48261923-48261942 | None:intergenic | 45.0% | |
| GTAGATTGAACTGGTGTGAC+TGG | - | chr3_3:48262044-48262063 | Msa0455380:intron | 45.0% | |
| CATGGTTCAACTGGTTGTAC+CGG | - | chr3_3:48262069-48262088 | Msa0455380:intron | 45.0% | |
| !! | CGGTGTAGTGGGTATAAGTA+TGG | + | chr3_3:48262253-48262272 | None:intergenic | 45.0% |
| ! | ACACCGCAATAGTGTTTTGC+TGG | - | chr3_3:48262267-48262286 | Msa0455380:intron | 45.0% |
| !! | TGTTTTGCTGGTTGCTTGCA+TGG | - | chr3_3:48262279-48262298 | Msa0455380:intron | 45.0% |
| ! | ATGGCTTTGCTATCCGCAAA+TGG | - | chr3_3:48262298-48262317 | Msa0455380:intron | 45.0% |
| GATATTGAGTGGTTGTGGGA+GGG | + | chr3_3:48262705-48262724 | None:intergenic | 45.0% | |
| AGATATTGAGTGGTTGTGGG+AGG | + | chr3_3:48262706-48262725 | None:intergenic | 45.0% | |
| AGAAAGGGGAAAGTGGTCAT+TGG | + | chr3_3:48262731-48262750 | None:intergenic | 45.0% | |
| CAGTCATGGGAGATAAGCTT+TGG | + | chr3_3:48262893-48262912 | None:intergenic | 45.0% | |
| CAAAGCTTATCTCCCATGAC+TGG | - | chr3_3:48262891-48262910 | Msa0455380:intron | 45.0% | |
| ! | TATCTCCCATGACTGGTCAA+CGG | - | chr3_3:48262898-48262917 | Msa0455380:intron | 45.0% |
| AGGAAGATAAGAGTGATCCC+GGG | - | chr3_3:48263426-48263445 | Msa0455380:intron | 45.0% | |
| ACATCTTCAGATTCACTCCC+GGG | + | chr3_3:48263446-48263465 | None:intergenic | 45.0% | |
| CACATCTTCAGATTCACTCC+CGG | + | chr3_3:48263447-48263466 | None:intergenic | 45.0% | |
| ! | CTCAGTTTTGCTTCTTCCAG+CGG | + | chr3_3:48263516-48263535 | None:intergenic | 45.0% |
| TTCTTAGGTGCTCTCTTAGG+TGG | + | chr3_3:48263572-48263591 | None:intergenic | 45.0% | |
| ! | GACTTTGAGGAAGACTTGGT+TGG | + | chr3_3:48263707-48263726 | None:intergenic | 45.0% |
| TCACGCAACTGATCATCTGT+GGG | + | chr3_3:48263928-48263947 | None:intergenic | 45.0% | |
| ATCACGCAACTGATCATCTG+TGG | + | chr3_3:48263929-48263948 | None:intergenic | 45.0% | |
| GACAGCATCCCAGTCAATAA+AGG | + | chr3_3:48264085-48264104 | None:intergenic | 45.0% | |
| AGGTGCAGCATATTTCTTGC+TGG | - | chr3_3:48264307-48264326 | Msa0455380:CDS | 45.0% | |
| GAGGAGAGTCAGGTTAAAAG+AGG | - | chr3_3:48264419-48264438 | Msa0455380:CDS | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | + | chr3_3:48264565-48264584 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | chr3_3:48264566-48264585 | None:intergenic | 45.0% |
| AAGCTAGACCCAATCTTGGT+TGG | + | chr3_3:48265069-48265088 | None:intergenic | 45.0% | |
| AACCAAGATTGGGTCTAGCT+TGG | - | chr3_3:48265068-48265087 | Msa0455380:intron | 45.0% | |
| ! | ACCAAGATTGGGTCTAGCTT+GGG | - | chr3_3:48265069-48265088 | Msa0455380:intron | 45.0% |
| ACCTTGGTTCACCATCGTAT+GGG | + | chr3_3:48265103-48265122 | None:intergenic | 45.0% | |
| AACCTTGGTTCACCATCGTA+TGG | + | chr3_3:48265104-48265123 | None:intergenic | 45.0% | |
| CCCAACTGACATTTGAACCT+TGG | + | chr3_3:48265119-48265138 | None:intergenic | 45.0% | |
| GCTCATGATTCAGAAAGAGC+TGG | - | chr3_3:48265288-48265307 | Msa0455380:intron | 45.0% | |
| ATCCTCCTCTTCATCTTCCT+CGG | + | chr3_3:48265341-48265360 | None:intergenic | 45.0% | |
| ATGCCGAGAAAGATGAAGAC+CGG | - | chr3_3:48265359-48265378 | Msa0455380:intron | 45.0% | |
| AGACCGGTCTTCATCTTTCT+CGG | + | chr3_3:48265365-48265384 | None:intergenic | 45.0% | |
| TCAGGCTTAAGGCTTAAGAC+CGG | + | chr3_3:48265381-48265400 | None:intergenic | 45.0% | |
| GATTTGAACTCAGCACCTCG+AGG | + | chr3_3:48257100-48257119 | None:intergenic | 50.0% | |
| GTTCAAATCCCCTTACGGTC+CGG | - | chr3_3:48257111-48257130 | Msa0455380:intron | 50.0% | |
| GAGCAAGATCAGTATGGGCA+AGG | - | chr3_3:48257464-48257483 | Msa0455380:intron | 50.0% | |
| TATGGGCAAGGAAGAAGCAG+TGG | - | chr3_3:48257476-48257495 | Msa0455380:intron | 50.0% | |
| ! | GGAGAGTAACGGAGTCAAAG+AGG | - | chr3_3:48257602-48257621 | Msa0455380:intron | 50.0% |
| ! | GGGTGTGGAAAAGGTACAAG+AGG | - | chr3_3:48257671-48257690 | Msa0455380:intron | 50.0% |
| TGGGGTGGGAGAAGTAAAAG+AGG | - | chr3_3:48257710-48257729 | Msa0455380:intron | 50.0% | |
| GAGGATAAGAAAGCCGATGG+GGG | - | chr3_3:48257729-48257748 | Msa0455380:intron | 50.0% | |
| TGGGGGCGATGAAGTAAAAG+AGG | - | chr3_3:48257746-48257765 | Msa0455380:intron | 50.0% | |
| !! | GGAGAAGAAAGATGATGGGG+TGG | - | chr3_3:48257908-48257927 | Msa0455380:CDS | 50.0% |
| ! | TGATGGCGTGAAAGAAGCAG+TGG | - | chr3_3:48258028-48258047 | Msa0455380:intron | 50.0% |
| AGAGACAGAGGAGAAGGAAG+AGG | - | chr3_3:48258286-48258305 | Msa0455380:intron | 50.0% | |
| GAGACAGAGGAGAAGGAAGA+GGG | - | chr3_3:48258287-48258306 | Msa0455380:intron | 50.0% | |
| GAAGGAAGAGGGCGATGAAA+AGG | - | chr3_3:48258298-48258317 | Msa0455380:CDS | 50.0% | |
| GAAAACTGAAGCAGAGACGG+AGG | - | chr3_3:48258322-48258341 | Msa0455380:CDS | 50.0% | |
| GAAGAAGATAAGGCAGAGGG+TGG | - | chr3_3:48258383-48258402 | Msa0455380:CDS | 50.0% | |
| AGATAAGGCAGAGGGTGGTA+AGG | - | chr3_3:48258388-48258407 | Msa0455380:intron | 50.0% | |
| GAGGGTGGTAAGGCTAAGAA+AGG | - | chr3_3:48258398-48258417 | Msa0455380:intron | 50.0% | |
| ! | GGATCAAAAAAGCGTGCCAG+AGG | - | chr3_3:48258419-48258438 | Msa0455380:intron | 50.0% |
| ! | AAAAAAGCGTGCCAGAGGGA+AGG | - | chr3_3:48258424-48258443 | Msa0455380:intron | 50.0% |
| ! | CTAGTTGGAGTCTTTGGCTC+TGG | + | chr3_3:48258494-48258513 | None:intergenic | 50.0% |
| CACGGCCCTGCAAATTGAAA+AGG | + | chr3_3:48258685-48258704 | None:intergenic | 50.0% | |
| ! | CTTTTCAATTTGCAGGGCCG+TGG | - | chr3_3:48258683-48258702 | Msa0455380:CDS | 50.0% |
| AAGATTGAGTGCGGTGTACG+TGG | - | chr3_3:48259180-48259199 | Msa0455380:intron | 50.0% | |
| CGAACCAAATCGCGATTCTC+TGG | + | chr3_3:48259387-48259406 | None:intergenic | 50.0% | |
| AGAGAGACACAAGTCAACCC+TGG | - | chr3_3:48259479-48259498 | Msa0455380:intron | 50.0% | |
| CGGTACGTTATTTGAGTCCG+TGG | + | chr3_3:48259874-48259893 | None:intergenic | 50.0% | |
| CCAAAGCATGAACATGCGGT+GGG | + | chr3_3:48261032-48261051 | None:intergenic | 50.0% | |
| ACCAAAGCATGAACATGCGG+TGG | + | chr3_3:48261033-48261052 | None:intergenic | 50.0% | |
| ! | ATGTGTATGCACAGGGGTAC+CGG | - | chr3_3:48261053-48261072 | Msa0455380:intron | 50.0% |
| !! | TGCTAAGCTGACGGACTTTC+TGG | - | chr3_3:48261225-48261244 | Msa0455380:intron | 50.0% |
| CACAGTTGTGGTTGCATGAG+GGG | + | chr3_3:48261254-48261273 | None:intergenic | 50.0% | |
| CCACAGTTGTGGTTGCATGA+GGG | + | chr3_3:48261255-48261274 | None:intergenic | 50.0% | |
| ACCACAGTTGTGGTTGCATG+AGG | + | chr3_3:48261256-48261275 | None:intergenic | 50.0% | |
| TTCTGCAAGCACCACAGTTG+TGG | + | chr3_3:48261266-48261285 | None:intergenic | 50.0% | |
| ! | AGTCAAGCAAGAAGCGTAGG+CGG | - | chr3_3:48261410-48261429 | Msa0455380:intron | 50.0% |
| CTGTCAAACGAGGTACACCA+AGG | - | chr3_3:48261434-48261453 | Msa0455380:intron | 50.0% | |
| AAACGAGGTACACCAAGGTC+TGG | - | chr3_3:48261439-48261458 | Msa0455380:intron | 50.0% | |
| GCCAATAACAGCGACAGTTG+TGG | - | chr3_3:48261705-48261724 | Msa0455380:intron | 50.0% | |
| GCCACAACTGTCGCTGTTAT+TGG | + | chr3_3:48261709-48261728 | None:intergenic | 50.0% | |
| CAATGGCCATCTGCATAGTG+CGG | + | chr3_3:48261754-48261773 | None:intergenic | 50.0% | |
| CTATGCAGATGGCCATTGCA+TGG | - | chr3_3:48261756-48261775 | Msa0455380:intron | 50.0% | |
| ! | TGGCCATTGCATGGCGTTTT+AGG | - | chr3_3:48261765-48261784 | Msa0455380:intron | 50.0% |
| ! | GGCCATTGCATGGCGTTTTA+GGG | - | chr3_3:48261766-48261785 | Msa0455380:intron | 50.0% |
| AGCCCTAAAACGCCATGCAA+TGG | + | chr3_3:48261771-48261790 | None:intergenic | 50.0% | |
| CAGCTACTACTGTGATGGCA+CGG | - | chr3_3:48261862-48261881 | Msa0455380:intron | 50.0% | |
| !! | TCCCCGGCGTTTTTGCTTTT+TGG | - | chr3_3:48261919-48261938 | Msa0455380:CDS | 50.0% |
| ! | GGCTTTGTCACAAGCAGAGA+AGG | + | chr3_3:48262004-48262023 | None:intergenic | 50.0% |
| AACCAGGCCGTAGATTGAAC+TGG | - | chr3_3:48262035-48262054 | Msa0455380:intron | 50.0% | |
| TGACTGGGTCATGGTTCAAC+TGG | - | chr3_3:48262060-48262079 | Msa0455380:intron | 50.0% | |
| TGGTGGTCCAGAATACCACT+CGG | + | chr3_3:48262349-48262368 | None:intergenic | 50.0% | |
| ! | CTTTTCACTCGGTAGGTGAG+AGG | + | chr3_3:48262424-48262443 | None:intergenic | 50.0% |
| GGGAGTAGCTCATAGGAACA+AGG | - | chr3_3:48262853-48262872 | Msa0455380:intron | 50.0% | |
| ATGCACCGTTGACCAGTCAT+GGG | + | chr3_3:48262906-48262925 | None:intergenic | 50.0% | |
| ! | CGGGGCTGTATATTTTGCAG+AGG | - | chr3_3:48263246-48263265 | Msa0455380:intron | 50.0% |
| TCTGCAAAGAAAGAGTCCGC+TGG | - | chr3_3:48263497-48263516 | Msa0455380:intron | 50.0% | |
| TTAGGTGCTCTCTTAGGTGG+TGG | + | chr3_3:48263569-48263588 | None:intergenic | 50.0% | |
| ! | GAGGAAGACTTGGTTGGAGT+TGG | + | chr3_3:48263701-48263720 | None:intergenic | 50.0% |
| CTGATCATCTGTGGGATTCG+AGG | + | chr3_3:48263920-48263939 | None:intergenic | 50.0% | |
| GCAGCATATTTCTTGCTGGC+TGG | - | chr3_3:48264311-48264330 | Msa0455380:CDS | 50.0% | |
| AGATCAGATGGAGGAGAGTC+AGG | - | chr3_3:48264409-48264428 | Msa0455380:CDS | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | + | chr3_3:48264561-48264580 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | chr3_3:48264567-48264586 | None:intergenic | 50.0% |
| CCACTTAGTGGGATAAGGCT+TGG | - | chr3_3:48264564-48264583 | Msa0455380:CDS | 50.0% | |
| ! | CCAAGATTGGGTCTAGCTTG+GGG | - | chr3_3:48265070-48265089 | Msa0455380:intron | 50.0% |
| TTCACCATCGTATGGGAGAC+TGG | + | chr3_3:48265096-48265115 | None:intergenic | 50.0% | |
| TCCCATACGATGGTGAACCA+AGG | - | chr3_3:48265099-48265118 | Msa0455380:intron | 50.0% | |
| TGAAGAAGCAGATGAGTCCG+AGG | - | chr3_3:48265321-48265340 | Msa0455380:intron | 50.0% | |
| TGAGTCCGAGGAAGATGAAG+AGG | - | chr3_3:48265333-48265352 | Msa0455380:intron | 50.0% | |
| TGGCGTGAAAGAAGCAGTGG+AGG | - | chr3_3:48258031-48258050 | Msa0455380:intron | 55.0% | |
| AACTGAAGCAGAGACGGAGG+AGG | - | chr3_3:48258325-48258344 | Msa0455380:CDS | 55.0% | |
| AAGACAGCAACAGCGCATGC+CGG | + | chr3_3:48259209-48259228 | None:intergenic | 55.0% | |
| ATGCGCTGTTGCTGTCTTGG+CGG | - | chr3_3:48259211-48259230 | Msa0455380:intron | 55.0% | |
| AGCAGAGAGACCCACTTAGC+TGG | - | chr3_3:48259521-48259540 | Msa0455380:intron | 55.0% | |
| CCTTCCCTCTCCTTCCAAAG+AGG | + | chr3_3:48260144-48260163 | None:intergenic | 55.0% | |
| ! | CCTCTTTGGAAGGAGAGGGA+AGG | - | chr3_3:48260141-48260160 | Msa0455380:intron | 55.0% |
| CCCACCGCATGTTCATGCTT+TGG | - | chr3_3:48261029-48261048 | Msa0455380:CDS | 55.0% | |
| !! | TGTGTATGCACAGGGGTACC+GGG | - | chr3_3:48261054-48261073 | Msa0455380:intron | 55.0% |
| CCCTCATGCAACCACAACTG+TGG | - | chr3_3:48261252-48261271 | Msa0455380:intron | 55.0% | |
| GAGGTACACCAAGGTCTGGT+GGG | - | chr3_3:48261443-48261462 | Msa0455380:intron | 55.0% | |
| AGGTACACCAAGGTCTGGTG+GGG | - | chr3_3:48261444-48261463 | Msa0455380:intron | 55.0% | |
| GGTGGGGCAAGTACTTCAAG+AGG | - | chr3_3:48261460-48261479 | Msa0455380:intron | 55.0% | |
| GAGCATCCGCACTATGCAGA+TGG | - | chr3_3:48261745-48261764 | Msa0455380:intron | 55.0% | |
| !!! | GCATGGCGTTTTAGGGCTGT+AGG | - | chr3_3:48261773-48261792 | Msa0455380:intron | 55.0% |
| CGTGCCATCACAGTAGTAGC+TGG | + | chr3_3:48261864-48261883 | None:intergenic | 55.0% | |
| CACCAGTTCAATCTACGGCC+TGG | + | chr3_3:48262040-48262059 | None:intergenic | 55.0% | |
| GAACTGGTGTGACTGGGTCA+TGG | - | chr3_3:48262051-48262070 | Msa0455380:intron | 55.0% | |
| TTAGTCTCACACCCACCGAG+TGG | - | chr3_3:48262331-48262350 | Msa0455380:intron | 55.0% | |
| ACACCCACCGAGTGGTATTC+TGG | - | chr3_3:48262339-48262358 | Msa0455380:intron | 55.0% | |
| GGTCCAGAATACCACTCGGT+GGG | + | chr3_3:48262345-48262364 | None:intergenic | 55.0% | |
| TGGTCCAGAATACCACTCGG+TGG | + | chr3_3:48262346-48262365 | None:intergenic | 55.0% | |
| CATGCACCGTTGACCAGTCA+TGG | + | chr3_3:48262907-48262926 | None:intergenic | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | + | chr3_3:48264553-48264572 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | - | chr3_3:48264552-48264571 | Msa0455380:CDS | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | - | chr3_3:48264553-48264572 | Msa0455380:CDS | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | - | chr3_3:48264559-48264578 | Msa0455380:CDS | 55.0% | |
| CCCCAAGCTAGACCCAATCT+TGG | + | chr3_3:48265073-48265092 | None:intergenic | 55.0% | |
| GTCCGAGGAAGATGAAGAGG+AGG | - | chr3_3:48265336-48265355 | Msa0455380:intron | 55.0% | |
| !! | GTGCAGCCTTTTGGTTGGGT+TGG | - | chr3_3:48265572-48265591 | Msa0455380:intron | 55.0% |
| TGGCAGCCAACCCAACCAAA+AGG | + | chr3_3:48265581-48265600 | None:intergenic | 55.0% | |
| TGAAGCAGAGACGGAGGAGG+AGG | - | chr3_3:48258328-48258347 | Msa0455380:CDS | 60.0% | |
| ! | CGGACTGGGCGATCACTAGT+TGG | + | chr3_3:48258509-48258528 | None:intergenic | 60.0% |
| GTGATCGCCCAGTCCGAGAA+AGG | - | chr3_3:48258513-48258532 | Msa0455380:intron | 60.0% | |
| GGCATGCGCTGTTGCTGTCT+TGG | - | chr3_3:48259208-48259227 | Msa0455380:intron | 60.0% | |
| GCGGCCAGAGAATCGCGATT+TGG | - | chr3_3:48259380-48259399 | Msa0455380:intron | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | - | chr3_3:48260505-48260524 | Msa0455380:intron | 60.0% |
| CTAGAGCTCCCGCATACGCA+GGG | + | chr3_3:48260532-48260551 | None:intergenic | 60.0% | |
| ACTAGAGCTCCCGCATACGC+AGG | + | chr3_3:48260533-48260552 | None:intergenic | 60.0% | |
| ! | ATGCGGGAGCTCTAGTGCAC+CGG | - | chr3_3:48260537-48260556 | Msa0455380:intron | 60.0% |
| !! | CGTAGGCGGACTGTCAAACG+AGG | - | chr3_3:48261424-48261443 | Msa0455380:intron | 60.0% |
| CGAGGTACACCAAGGTCTGG+TGG | - | chr3_3:48261442-48261461 | Msa0455380:intron | 60.0% | |
| GTACTTGCCCCACCAGACCT+TGG | + | chr3_3:48261454-48261473 | None:intergenic | 60.0% | |
| AGCAGAGACGGAGGAGGAGG+AGG | - | chr3_3:48258331-48258350 | Msa0455380:CDS | 65.0% | |
| AGTGCGGTGTACGTGGCTGC+CGG | - | chr3_3:48259187-48259206 | Msa0455380:intron | 65.0% | |
| CGCTGTTGCTGTCTTGGCGG+TGG | - | chr3_3:48259214-48259233 | Msa0455380:intron | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | + | chr3_3:48260507-48260526 | None:intergenic | 65.0% | |
| CATACGCAGGGTCCGGGAAG+GGG | + | chr3_3:48260520-48260539 | None:intergenic | 65.0% | |
| GCATACGCAGGGTCCGGGAA+GGG | + | chr3_3:48260521-48260540 | None:intergenic | 65.0% | |
| CTTCCCGGACCCTGCGTATG+CGG | - | chr3_3:48260520-48260539 | Msa0455380:intron | 65.0% | |
| TTCCCGGACCCTGCGTATGC+GGG | - | chr3_3:48260521-48260540 | Msa0455380:intron | 65.0% | |
| ! | TGCGGGAGCTCTAGTGCACC+GGG | - | chr3_3:48260538-48260557 | Msa0455380:intron | 65.0% |
| GGGGCCAGTCTCCCATACGA+TGG | - | chr3_3:48265089-48265108 | Msa0455380:intron | 65.0% | |
| GGAGGAGGAGGAGGACGACG+AGG | - | chr3_3:48258340-48258359 | Msa0455380:CDS | 70.0% | |
| CGCATACGCAGGGTCCGGGA+AGG | + | chr3_3:48260522-48260541 | None:intergenic | 70.0% | |
| CTCCCGCATACGCAGGGTCC+GGG | + | chr3_3:48260526-48260545 | None:intergenic | 70.0% | |
| GCTCCCGCATACGCAGGGTC+CGG | + | chr3_3:48260527-48260546 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 48256521 | 48265759 | 48256521 | ID=Msa0455380;Name=Msa0455380 |
| chr3_3 | mRNA | 48256521 | 48265759 | 48256521 | ID=Msa0455380-mRNA-1;Parent=Msa0455380;Name=Msa0455380-mRNA-1;_AED=0.09;_eAED=0.09;_QI=160|0.83|0.92|0.92|0.91|0.84|13|372|832 |
| chr3_3 | exon | 48256521 | 48257038 | 48256521 | ID=Msa0455380-mRNA-1:exon:8945;Parent=Msa0455380-mRNA-1 |
| chr3_3 | exon | 48257491 | 48257521 | 48257491 | ID=Msa0455380-mRNA-1:exon:8944;Parent=Msa0455380-mRNA-1 |
| chr3_3 | exon | 48257763 | 48257933 | 48257763 | ID=Msa0455380-mRNA-1:exon:8943;Parent=Msa0455380-mRNA-1 |
| chr3_3 | exon | 48258293 | 48258402 | 48258293 | ID=Msa0455380-mRNA-1:exon:8942;Parent=Msa0455380-mRNA-1 |
| chr3_3 | exon | 48258540 | 48259014 | 48258540 | ID=Msa0455380-mRNA-1:exon:8941;Parent=Msa0455380-mRNA-1 |
| chr3_3 | exon | 48260788 | 48260868 | 48260788 | ID=Msa0455380-mRNA-1:exon:8940;Parent=Msa0455380-mRNA-1 |
| chr3_3 | exon | 48260989 | 48261066 | 48260989 | ID=Msa0455380-mRNA-1:exon:8939;Parent=Msa0455380-mRNA-1 |
| chr3_3 | exon | 48261555 | 48261662 | 48261555 | ID=Msa0455380-mRNA-1:exon:8938;Parent=Msa0455380-mRNA-1 |
| chr3_3 | exon | 48261879 | 48261938 | 48261879 | ID=Msa0455380-mRNA-1:exon:8937;Parent=Msa0455380-mRNA-1 |
| chr3_3 | exon | 48262118 | 48262197 | 48262118 | ID=Msa0455380-mRNA-1:exon:8936;Parent=Msa0455380-mRNA-1 |
| chr3_3 | exon | 48263549 | 48263582 | 48263549 | ID=Msa0455380-mRNA-1:exon:8935;Parent=Msa0455380-mRNA-1 |
| chr3_3 | exon | 48263679 | 48264867 | 48263679 | ID=Msa0455380-mRNA-1:exon:8934;Parent=Msa0455380-mRNA-1 |
| chr3_3 | exon | 48265664 | 48265759 | 48265664 | ID=Msa0455380-mRNA-1:exon:8933;Parent=Msa0455380-mRNA-1 |
| chr3_3 | five_prime_UTR | 48265664 | 48265759 | 48265664 | ID=Msa0455380-mRNA-1:five_prime_utr;Parent=Msa0455380-mRNA-1 |
| chr3_3 | five_prime_UTR | 48264804 | 48264867 | 48264804 | ID=Msa0455380-mRNA-1:five_prime_utr;Parent=Msa0455380-mRNA-1 |
| chr3_3 | CDS | 48263679 | 48264803 | 48263679 | ID=Msa0455380-mRNA-1:cds;Parent=Msa0455380-mRNA-1 |
| chr3_3 | CDS | 48263549 | 48263582 | 48263549 | ID=Msa0455380-mRNA-1:cds;Parent=Msa0455380-mRNA-1 |
| chr3_3 | CDS | 48262118 | 48262197 | 48262118 | ID=Msa0455380-mRNA-1:cds;Parent=Msa0455380-mRNA-1 |
| chr3_3 | CDS | 48261879 | 48261938 | 48261879 | ID=Msa0455380-mRNA-1:cds;Parent=Msa0455380-mRNA-1 |
| chr3_3 | CDS | 48261555 | 48261662 | 48261555 | ID=Msa0455380-mRNA-1:cds;Parent=Msa0455380-mRNA-1 |
| chr3_3 | CDS | 48260989 | 48261066 | 48260989 | ID=Msa0455380-mRNA-1:cds;Parent=Msa0455380-mRNA-1 |
| chr3_3 | CDS | 48260788 | 48260868 | 48260788 | ID=Msa0455380-mRNA-1:cds;Parent=Msa0455380-mRNA-1 |
| chr3_3 | CDS | 48258540 | 48259014 | 48258540 | ID=Msa0455380-mRNA-1:cds;Parent=Msa0455380-mRNA-1 |
| chr3_3 | CDS | 48258293 | 48258402 | 48258293 | ID=Msa0455380-mRNA-1:cds;Parent=Msa0455380-mRNA-1 |
| chr3_3 | CDS | 48257763 | 48257933 | 48257763 | ID=Msa0455380-mRNA-1:cds;Parent=Msa0455380-mRNA-1 |
| chr3_3 | CDS | 48257491 | 48257521 | 48257491 | ID=Msa0455380-mRNA-1:cds;Parent=Msa0455380-mRNA-1 |
| chr3_3 | CDS | 48256893 | 48257038 | 48256893 | ID=Msa0455380-mRNA-1:cds;Parent=Msa0455380-mRNA-1 |
| chr3_3 | three_prime_UTR | 48256521 | 48256892 | 48256521 | ID=Msa0455380-mRNA-1:three_prime_utr;Parent=Msa0455380-mRNA-1 |
| Gene Sequence |
| Protein sequence |
