Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0699190 | XP_013457403.1 | 94.783 | 115 | 6 | 0 | 1 | 115 | 1 | 115 | 1.97e-51 | 168 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0699190 | A0A072UNP9 | 94.783 | 115 | 6 | 0 | 1 | 115 | 1 | 115 | 9.42e-52 | 168 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006880 | Msa0699190 | 0.817057 | 4.018028e-52 | -8.615850e-47 |
| Msa0007850 | Msa0699190 | 0.852017 | 6.082723e-61 | -8.615850e-47 |
| Msa0008090 | Msa0699190 | 0.839548 | 1.483873e-57 | -8.615850e-47 |
| Msa0010490 | Msa0699190 | 0.823656 | 1.231585e-53 | -8.615850e-47 |
| Msa0010500 | Msa0699190 | 0.830831 | 2.353536e-55 | -8.615850e-47 |
| Msa0020390 | Msa0699190 | 0.816318 | 5.881579e-52 | -8.615850e-47 |
| Msa0029260 | Msa0699190 | 0.832702 | 8.129119e-56 | -8.615850e-47 |
| Msa0029630 | Msa0699190 | 0.800578 | 1.349773e-48 | -8.615850e-47 |
| Msa0031510 | Msa0699190 | 0.838760 | 2.374264e-57 | -8.615850e-47 |
| Msa0032810 | Msa0699190 | 0.852932 | 3.336518e-61 | -8.615850e-47 |
| Msa0033880 | Msa0699190 | 0.826845 | 2.169345e-54 | -8.615850e-47 |
| Msa0042280 | Msa0699190 | 0.807312 | 5.374443e-50 | -8.615850e-47 |
| Msa0043860 | Msa0699190 | 0.862086 | 6.502048e-64 | -8.615850e-47 |
| Msa0045730 | Msa0699190 | 0.814417 | 1.556931e-51 | -8.615850e-47 |
| Msa0047160 | Msa0699190 | 0.815448 | 9.198969e-52 | -8.615850e-47 |
| Msa0048180 | Msa0699190 | 0.805347 | 1.395036e-49 | -8.615850e-47 |
| Msa0053240 | Msa0699190 | 0.813165 | 2.938353e-51 | -8.615850e-47 |
| Msa0055100 | Msa0699190 | 0.812482 | 4.146932e-51 | -8.615850e-47 |
| Msa0056270 | Msa0699190 | 0.834675 | 2.613448e-56 | -8.615850e-47 |
| Msa0057610 | Msa0699190 | 0.801277 | 9.715131e-49 | -8.615850e-47 |
| Msa0068020 | Msa0699190 | 0.887016 | 2.065794e-72 | -8.615850e-47 |
| Msa0077010 | Msa0699190 | 0.815504 | 8.938284e-52 | -8.615850e-47 |
| Msa0093010 | Msa0699190 | 0.814660 | 1.375989e-51 | -8.615850e-47 |
| Msa0098740 | Msa0699190 | 0.822930 | 1.820037e-53 | -8.615850e-47 |
| Msa0101180 | Msa0699190 | 0.822014 | 2.970681e-53 | -8.615850e-47 |
| Msa0113240 | Msa0699190 | 0.836382 | 9.671930e-57 | -8.615850e-47 |
| Msa0115370 | Msa0699190 | 0.830609 | 2.667460e-55 | -8.615850e-47 |
| Msa0116130 | Msa0699190 | 0.817229 | 3.675153e-52 | -8.615850e-47 |
| Msa0603570 | Msa0699190 | 0.825381 | 4.834884e-54 | -8.615850e-47 |
| Msa0609000 | Msa0699190 | 0.874935 | 4.577447e-68 | -8.615850e-47 |
| Msa0610310 | Msa0699190 | 0.827664 | 1.380546e-54 | -8.615850e-47 |
| Msa0610390 | Msa0699190 | 0.830257 | 3.251537e-55 | -8.615850e-47 |
| Msa0615580 | Msa0699190 | 0.894753 | 1.833656e-75 | -8.615850e-47 |
| Msa0615680 | Msa0699190 | 0.806653 | 7.408410e-50 | -8.615850e-47 |
| Msa0618930 | Msa0699190 | 0.839887 | 1.211251e-57 | -8.615850e-47 |
| Msa0619860 | Msa0699190 | 0.881991 | 1.514003e-70 | -8.615850e-47 |
| Msa0623200 | Msa0699190 | 0.829636 | 4.606875e-55 | -8.615850e-47 |
| Msa0631250 | Msa0699190 | 0.832651 | 8.369580e-56 | -8.615850e-47 |
| Msa0633570 | Msa0699190 | 0.847615 | 1.033803e-59 | -8.615850e-47 |
| Msa0644030 | Msa0699190 | 0.801167 | 1.022994e-48 | -8.615850e-47 |
| Msa0650920 | Msa0699190 | 0.807107 | 5.940481e-50 | -8.615850e-47 |
| Msa0654870 | Msa0699190 | 0.814594 | 1.422644e-51 | -8.615850e-47 |
| Msa0659140 | Msa0699190 | 0.810507 | 1.113666e-50 | -8.615850e-47 |
| Msa0659990 | Msa0699190 | 0.817246 | 3.642926e-52 | -8.615850e-47 |
| Msa0662630 | Msa0699190 | 0.824405 | 8.217699e-54 | -8.615850e-47 |
| Msa0666230 | Msa0699190 | 0.847920 | 8.521084e-60 | -8.615850e-47 |
| Msa0669720 | Msa0699190 | 0.809252 | 2.074504e-50 | -8.615850e-47 |
| Msa0669760 | Msa0699190 | 0.813286 | 2.763677e-51 | -8.615850e-47 |
| Msa0672100 | Msa0699190 | 0.847285 | 1.273830e-59 | -8.615850e-47 |
| Msa0683780 | Msa0699190 | 0.860543 | 1.920060e-63 | -8.615850e-47 |
| Msa0687230 | Msa0699190 | 0.836927 | 7.022808e-57 | -8.615850e-47 |
| Msa0687630 | Msa0699190 | 0.806667 | 7.358234e-50 | -8.615850e-47 |
| Msa0689500 | Msa0699190 | 0.830578 | 2.713302e-55 | -8.615850e-47 |
| Msa0693210 | Msa0699190 | 0.881359 | 2.561997e-70 | -8.615850e-47 |
| Msa0694990 | Msa0699190 | 0.853121 | 2.945947e-61 | -8.615850e-47 |
| Msa0699190 | Msa0699990 | 0.807092 | 5.984542e-50 | -8.615850e-47 |
| Msa0699190 | Msa0702150 | 0.825217 | 5.285838e-54 | -8.615850e-47 |
| Msa0699190 | Msa0702270 | 0.824868 | 6.393815e-54 | -8.615850e-47 |
| Msa0699190 | Msa0704660 | 0.838287 | 3.145738e-57 | -8.615850e-47 |
| Msa0699190 | Msa0705090 | 0.806917 | 6.515346e-50 | -8.615850e-47 |
| Msa0699190 | Msa0706390 | 0.805448 | 1.328409e-49 | -8.615850e-47 |
| Msa0699190 | Msa0706500 | 0.811399 | 7.137989e-51 | -8.615850e-47 |
| Msa0699190 | Msa0729200 | 0.825039 | 5.824270e-54 | -8.615850e-47 |
| Msa0699190 | Msa0751010 | 0.804449 | 2.148608e-49 | -8.615850e-47 |
| Msa0699190 | Msa0766080 | 0.811797 | 5.848468e-51 | -8.615850e-47 |
| Msa0699190 | Msa0769590 | 0.833437 | 5.335407e-56 | -8.615850e-47 |
| Msa0699190 | Msa0774750 | 0.816501 | 5.353178e-52 | -8.615850e-47 |
| Msa0699190 | Msa0780930 | 0.800627 | 1.318997e-48 | -8.615850e-47 |
| Msa0699190 | Msa0781270 | 0.821078 | 4.887751e-53 | -8.615850e-47 |
| Msa0699190 | Msa0785130 | 0.831849 | 1.322110e-55 | -8.615850e-47 |
| Msa0699190 | Msa0794050 | 0.842336 | 2.752073e-58 | -8.615850e-47 |
| Msa0699190 | Msa0806880 | 0.845721 | 3.404427e-59 | -8.615850e-47 |
| Msa0699190 | Msa0808800 | 0.829568 | 4.785744e-55 | -8.615850e-47 |
| Msa0699190 | Msa0818770 | 0.845391 | 4.181469e-59 | -8.615850e-47 |
| Msa0699190 | Msa0819210 | 0.817096 | 3.936900e-52 | -8.615850e-47 |
| Msa0699190 | Msa0822170 | 0.820493 | 6.664172e-53 | -8.615850e-47 |
| Msa0699190 | Msa0822180 | 0.812050 | 5.151015e-51 | -8.615850e-47 |
| Msa0699190 | Msa0824640 | 0.803840 | 2.876989e-49 | -8.615850e-47 |
| Msa0699190 | Msa0826500 | 0.810895 | 9.179063e-51 | -8.615850e-47 |
| Msa0699190 | Msa0833190 | -0.805166 | 1.522094e-49 | -8.615850e-47 |
| Msa0699190 | Msa0838370 | 0.852087 | 5.808412e-61 | -8.615850e-47 |
| Msa0699190 | Msa0852720 | 0.815119 | 1.088215e-51 | -8.615850e-47 |
| Msa0699190 | Msa0858440 | 0.878877 | 1.966868e-69 | -8.615850e-47 |
| Msa0699190 | Msa0895310 | 0.801505 | 8.722110e-49 | -8.615850e-47 |
| Msa0699190 | Msa0897400 | 0.808734 | 2.676964e-50 | -8.615850e-47 |
| Msa0699190 | Msa0906000 | 0.805090 | 1.579116e-49 | -8.615850e-47 |
| Msa0699190 | Msa0913240 | 0.871512 | 6.461115e-67 | -8.615850e-47 |
| Msa0699190 | Msa0921870 | 0.824676 | 7.093660e-54 | -8.615850e-47 |
| Msa0699190 | Msa0943170 | 0.832225 | 1.067075e-55 | -8.615850e-47 |
| Msa0699190 | Msa0944200 | 0.835234 | 1.889299e-56 | -8.615850e-47 |
| Msa0699190 | Msa0957450 | -0.802536 | 5.354090e-49 | -8.615850e-47 |
| Msa0699190 | Msa0960830 | 0.840870 | 6.699580e-58 | -8.615850e-47 |
| Msa0699190 | Msa0963020 | 0.872591 | 2.827815e-67 | -8.615850e-47 |
| Msa0699190 | Msa0973320 | 0.815376 | 9.543323e-52 | -8.615850e-47 |
| Msa0699190 | Msa0980540 | 0.815513 | 8.897983e-52 | -8.615850e-47 |
| Msa0699190 | Msa0992550 | 0.816468 | 5.445119e-52 | -8.615850e-47 |
| Msa0699190 | Msa0994290 | 0.843282 | 1.542603e-58 | -8.615850e-47 |
| Msa0699190 | Msa1019240 | 0.840132 | 1.045137e-57 | -8.615850e-47 |
| Msa0699190 | Msa1019260 | 0.831244 | 1.862944e-55 | -8.615850e-47 |
| Msa0699190 | Msa1023160 | 0.810619 | 1.053675e-50 | -8.615850e-47 |
| Msa0699190 | Msa1025260 | 0.807930 | 3.974408e-50 | -8.615850e-47 |
| Msa0699190 | Msa1025940 | 0.873488 | 1.414025e-67 | -8.615850e-47 |
| Msa0699190 | Msa1029970 | 0.800336 | 1.511492e-48 | -8.615850e-47 |
| Msa0699190 | Msa1039900 | 0.809609 | 1.738522e-50 | -8.615850e-47 |
| Msa0699190 | Msa1064560 | 0.801053 | 1.079529e-48 | -8.615850e-47 |
| Msa0699190 | Msa1070390 | 0.836505 | 8.997002e-57 | -8.615850e-47 |
| Msa0699190 | Msa1072710 | 0.827553 | 1.467790e-54 | -8.615850e-47 |
| Msa0699190 | Msa1083880 | 0.816897 | 4.363845e-52 | -8.615850e-47 |
| Msa0699190 | Msa1085470 | 0.808430 | 3.108965e-50 | -8.615850e-47 |
| Msa0699190 | Msa1104210 | 0.840441 | 8.680588e-58 | -8.615850e-47 |
| Msa0699190 | Msa1106210 | 0.822986 | 1.766040e-53 | -8.615850e-47 |
| Msa0699190 | Msa1109350 | 0.801553 | 8.527266e-49 | -8.615850e-47 |
| Msa0699190 | Msa1120810 | 0.802515 | 5.408792e-49 | -8.615850e-47 |
| Msa0699190 | Msa1122820 | 0.823901 | 1.079074e-53 | -8.615850e-47 |
| Msa0699190 | Msa1123350 | 0.811936 | 5.454238e-51 | -8.615850e-47 |
| Msa0699190 | Msa1125500 | 0.801614 | 8.286295e-49 | -8.615850e-47 |
| Msa0699190 | Msa1125790 | -0.807247 | 5.547288e-50 | -8.615850e-47 |
| Msa0699190 | Msa1126470 | 0.805414 | 1.350578e-49 | -8.615850e-47 |
| Msa0699190 | Msa1126830 | 0.829961 | 3.839425e-55 | -8.615850e-47 |
| Msa0699190 | Msa1126850 | 0.844188 | 8.824648e-59 | -8.615850e-47 |
| Msa0699190 | Msa1128990 | 0.811760 | 5.957630e-51 | -8.615850e-47 |
| Msa0699190 | Msa1131170 | 0.801098 | 1.056920e-48 | -8.615850e-47 |
| Msa0699190 | Msa1131560 | 0.854472 | 1.203401e-61 | -8.615850e-47 |
| Msa0699190 | Msa1135800 | -0.820528 | 6.538921e-53 | -8.615850e-47 |
| Msa0699190 | Msa1135810 | -0.829027 | 6.477691e-55 | -8.615850e-47 |
| Msa0699190 | Msa1154490 | 0.801581 | 8.416433e-49 | -8.615850e-47 |
| Msa0699190 | Msa1165780 | 0.872277 | 3.598970e-67 | -8.615850e-47 |
| Msa0699190 | Msa1165960 | 0.810170 | 1.316556e-50 | -8.615850e-47 |
| Msa0699190 | Msa1166870 | 0.866090 | 3.675875e-65 | -8.615850e-47 |
| Msa0699190 | Msa1173900 | 0.811200 | 7.883354e-51 | -8.615850e-47 |
| Msa0699190 | Msa1175350 | 0.824617 | 7.324293e-54 | -8.615850e-47 |
| Msa0699190 | Msa1179950 | 0.838691 | 2.473516e-57 | -8.615850e-47 |
| Msa0699190 | Msa1179980 | 0.857429 | 1.642772e-62 | -8.615850e-47 |
| Msa0699190 | Msa1184370 | 0.845070 | 5.108483e-59 | -8.615850e-47 |
| Msa0699190 | Msa1195300 | 0.858035 | 1.085549e-62 | -8.615850e-47 |
| Msa0699190 | Msa1202580 | 0.836138 | 1.115090e-56 | -8.615850e-47 |
| Msa0699190 | Msa1206650 | 0.806750 | 7.068830e-50 | -8.615850e-47 |
| Msa0699190 | Msa1208020 | 0.830465 | 2.891824e-55 | -8.615850e-47 |
| Msa0699190 | Msa1211830 | 0.850437 | 1.699533e-60 | -8.615850e-47 |
| Msa0699190 | Msa1227690 | 0.849451 | 3.206769e-60 | -8.615850e-47 |
| Msa0699190 | Msa1234830 | 0.817602 | 3.029107e-52 | -8.615850e-47 |
| Msa0699190 | Msa1234980 | 0.826851 | 2.161841e-54 | -8.615850e-47 |
| Msa0699190 | Msa1253400 | 0.808355 | 3.225324e-50 | -8.615850e-47 |
| Msa0699190 | Msa1253810 | 0.808712 | 2.706101e-50 | -8.615850e-47 |
| Msa0699190 | Msa1256770 | 0.841782 | 3.856938e-58 | -8.615850e-47 |
| Msa0699190 | Msa1262890 | 0.801273 | 9.732450e-49 | -8.615850e-47 |
| Msa0699190 | Msa1265630 | 0.813636 | 2.315581e-51 | -8.615850e-47 |
| Msa0699190 | Msa1270620 | 0.859867 | 3.072762e-63 | -8.615850e-47 |
| Msa0699190 | Msa1270690 | 0.860812 | 1.590588e-63 | -8.615850e-47 |
| Msa0699190 | Msa1276970 | 0.811530 | 6.687380e-51 | -8.615850e-47 |
| Msa0699190 | Msa1278900 | 0.830129 | 3.494648e-55 | -8.615850e-47 |
| Msa0699190 | Msa1294840 | 0.822293 | 2.560160e-53 | -8.615850e-47 |
| Msa0699190 | Msa1295110 | 0.818542 | 1.856208e-52 | -8.615850e-47 |
| Msa0699190 | Msa1296830 | 0.862938 | 3.554541e-64 | -8.615850e-47 |
| Msa0699190 | Msa1298050 | 0.816899 | 4.359673e-52 | -8.615850e-47 |
| Msa0699190 | Msa1299700 | 0.824370 | 8.372811e-54 | -8.615850e-47 |
| Msa0699190 | Msa1303580 | 0.818311 | 2.093846e-52 | -8.615850e-47 |
| Msa0699190 | Msa1306990 | 0.833503 | 5.136528e-56 | -8.615850e-47 |
| Msa0699190 | Msa1310690 | 0.823603 | 1.267599e-53 | -8.615850e-47 |
| Msa0699190 | Msa1331250 | 0.830804 | 2.388973e-55 | -8.615850e-47 |
| Msa0699190 | Msa1331710 | 0.815843 | 7.510174e-52 | -8.615850e-47 |
| Msa0699190 | Msa1343290 | 0.836480 | 9.127481e-57 | -8.615850e-47 |
| Msa0699190 | Msa1345450 | 0.808409 | 3.141895e-50 | -8.615850e-47 |
| Msa0699190 | Msa1349570 | 0.827373 | 1.621324e-54 | -8.615850e-47 |
| Msa0699190 | Msa1351540 | 0.830028 | 3.697636e-55 | -8.615850e-47 |
| Msa0699190 | Msa1352890 | 0.804728 | 1.879669e-49 | -8.615850e-47 |
| Msa0699190 | Msa1358430 | 0.805327 | 1.408667e-49 | -8.615850e-47 |
| Msa0699190 | Msa1358480 | 0.813685 | 2.258042e-51 | -8.615850e-47 |
| Msa0699190 | Msa1362420 | 0.800843 | 1.191334e-48 | -8.615850e-47 |
| Msa0699190 | Msa1363860 | 0.803936 | 2.747882e-49 | -8.615850e-47 |
| Msa0699190 | Msa1368530 | 0.802085 | 6.633124e-49 | -8.615850e-47 |
| Msa0699190 | Msa1369190 | 0.883154 | 5.704625e-71 | -8.615850e-47 |
| Msa0699190 | Msa1374830 | 0.800750 | 1.244689e-48 | -8.615850e-47 |
| Msa0699190 | Msa1376650 | 0.809215 | 2.112450e-50 | -8.615850e-47 |
| Msa0699190 | Msa1389680 | 0.813773 | 2.160416e-51 | -8.615850e-47 |
| Msa0699190 | Msa1397940 | 0.805318 | 1.414355e-49 | -8.615850e-47 |
| Msa0699190 | Msa1400110 | 0.818235 | 2.178695e-52 | -8.615850e-47 |
| Msa0699190 | Msa1400820 | 0.810572 | 1.078534e-50 | -8.615850e-47 |
| Msa0699190 | Msa1404190 | 0.802383 | 5.759103e-49 | -8.615850e-47 |
| Msa0699190 | Msa1411950 | 0.808927 | 2.435354e-50 | -8.615850e-47 |
| Msa0699190 | Msa1413260 | 0.800280 | 1.551730e-48 | -8.615850e-47 |
| Msa0699190 | Msa1413500 | 0.836502 | 9.013627e-57 | -8.615850e-47 |
| Msa0699190 | Msa1420660 | 0.822354 | 2.477255e-53 | -8.615850e-47 |
| Msa0699190 | Msa1425670 | 0.818629 | 1.774187e-52 | -8.615850e-47 |
| Msa0699190 | Msa1433600 | 0.816876 | 4.410842e-52 | -8.615850e-47 |
| Msa0699190 | Msa1445940 | 0.814559 | 1.448557e-51 | -8.615850e-47 |
| Msa0699190 | Msa1450280 | 0.850254 | 1.911798e-60 | -8.615850e-47 |
| Msa0699190 | Msa1454680 | 0.810151 | 1.329308e-50 | -8.615850e-47 |
| Msa0699190 | Msa1456050 | 0.809175 | 2.154220e-50 | -8.615850e-47 |
| Msa0699190 | Msa1457220 | 0.818045 | 2.405433e-52 | -8.615850e-47 |
| Msa0699190 | Msa1459960 | 0.834468 | 2.945883e-56 | -8.615850e-47 |
| Msa0699190 | Msa1462860 | 0.866107 | 3.630139e-65 | -8.615850e-47 |
| Msa0699190 | Msa1465080 | 0.804502 | 2.094727e-49 | -8.615850e-47 |
| Msa0125450 | Msa0699190 | 0.804903 | 1.727850e-49 | -8.615850e-47 |
| Msa0126520 | Msa0699190 | 0.832290 | 1.028326e-55 | -8.615850e-47 |
| Msa0126770 | Msa0699190 | 0.817112 | 3.904950e-52 | -8.615850e-47 |
| Msa0126840 | Msa0699190 | 0.850905 | 1.255232e-60 | -8.615850e-47 |
| Msa0126880 | Msa0699190 | 0.803060 | 4.173389e-49 | -8.615850e-47 |
| Msa0127850 | Msa0699190 | 0.825155 | 5.468430e-54 | -8.615850e-47 |
| Msa0131590 | Msa0699190 | 0.812566 | 3.974455e-51 | -8.615850e-47 |
| Msa0136120 | Msa0699190 | 0.808690 | 2.735674e-50 | -8.615850e-47 |
| Msa0142110 | Msa0699190 | 0.840877 | 6.674143e-58 | -8.615850e-47 |
| Msa0155320 | Msa0699190 | 0.809122 | 2.211874e-50 | -8.615850e-47 |
| Msa0165950 | Msa0699190 | 0.840721 | 7.331514e-58 | -8.615850e-47 |
| Msa0166750 | Msa0699190 | 0.830716 | 2.510284e-55 | -8.615850e-47 |
| Msa0167480 | Msa0699190 | 0.831822 | 1.342614e-55 | -8.615850e-47 |
| Msa0169300 | Msa0699190 | 0.828651 | 7.987554e-55 | -8.615850e-47 |
| Msa0171850 | Msa0699190 | 0.804096 | 2.544505e-49 | -8.615850e-47 |
| Msa0171940 | Msa0699190 | 0.822604 | 2.167776e-53 | -8.615850e-47 |
| Msa0174000 | Msa0699190 | 0.822436 | 2.371126e-53 | -8.615850e-47 |
| Msa0175200 | Msa0699190 | 0.806479 | 8.063361e-50 | -8.615850e-47 |
| Msa0177960 | Msa0699190 | 0.829913 | 3.943965e-55 | -8.615850e-47 |
| Msa0180020 | Msa0699190 | 0.851655 | 7.703194e-61 | -8.615850e-47 |
| Msa0183460 | Msa0699190 | 0.822140 | 2.778465e-53 | -8.615850e-47 |
| Msa0183870 | Msa0699190 | 0.816269 | 6.033068e-52 | -8.615850e-47 |
| Msa0187260 | Msa0699190 | 0.804812 | 1.804913e-49 | -8.615850e-47 |
| Msa0190590 | Msa0699190 | 0.854584 | 1.116782e-61 | -8.615850e-47 |
| Msa0191080 | Msa0699190 | 0.809180 | 2.149175e-50 | -8.615850e-47 |
| Msa0207670 | Msa0699190 | 0.818689 | 1.719015e-52 | -8.615850e-47 |
| Msa0226460 | Msa0699190 | 0.811893 | 5.575080e-51 | -8.615850e-47 |
| Msa0230520 | Msa0699190 | 0.822358 | 2.471913e-53 | -8.615850e-47 |
| Msa0231100 | Msa0699190 | 0.850602 | 1.527474e-60 | -8.615850e-47 |
| Msa0231710 | Msa0699190 | 0.823084 | 1.675854e-53 | -8.615850e-47 |
| Msa0231790 | Msa0699190 | 0.809201 | 2.126943e-50 | -8.615850e-47 |
| Msa0236620 | Msa0699190 | 0.824584 | 7.457926e-54 | -8.615850e-47 |
| Msa0371880 | Msa0699190 | 0.809112 | 2.222895e-50 | -8.615850e-47 |
| Msa0376820 | Msa0699190 | 0.818112 | 2.322638e-52 | -8.615850e-47 |
| Msa0384670 | Msa0699190 | 0.809438 | 1.892196e-50 | -8.615850e-47 |
| Msa0385500 | Msa0699190 | 0.842435 | 2.590888e-58 | -8.615850e-47 |
| Msa0389510 | Msa0699190 | 0.840424 | 8.766605e-58 | -8.615850e-47 |
| Msa0408240 | Msa0699190 | -0.831707 | 1.432936e-55 | -8.615850e-47 |
| Msa0416400 | Msa0699190 | 0.805866 | 1.085616e-49 | -8.615850e-47 |
| Msa0419520 | Msa0699190 | 0.846800 | 1.729674e-59 | -8.615850e-47 |
| Msa0423750 | Msa0699190 | 0.866801 | 2.186458e-65 | -8.615850e-47 |
| Msa0427860 | Msa0699190 | -0.840967 | 6.318263e-58 | -8.615850e-47 |
| Msa0443390 | Msa0699190 | 0.867781 | 1.062785e-65 | -8.615850e-47 |
| Msa0455380 | Msa0699190 | 0.819393 | 1.189267e-52 | -8.615850e-47 |
| Msa0456430 | Msa0699190 | 0.806093 | 9.724305e-50 | -8.615850e-47 |
| Msa0458060 | Msa0699190 | 0.821713 | 3.488909e-53 | -8.615850e-47 |
| Msa0458370 | Msa0699190 | -0.834881 | 2.318603e-56 | -8.615850e-47 |
| Msa0458640 | Msa0699190 | 0.801250 | 9.837002e-49 | -8.615850e-47 |
| Msa0462600 | Msa0699190 | 0.801789 | 7.629331e-49 | -8.615850e-47 |
| Msa0465550 | Msa0699190 | 0.812470 | 4.171979e-51 | -8.615850e-47 |
| Msa0470530 | Msa0699190 | 0.800275 | 1.555858e-48 | -8.615850e-47 |
| Msa0472130 | Msa0699190 | 0.817830 | 2.690785e-52 | -8.615850e-47 |
| Msa0474090 | Msa0699190 | -0.830376 | 3.041608e-55 | -8.615850e-47 |
| Msa0478580 | Msa0699190 | 0.811191 | 7.920622e-51 | -8.615850e-47 |
| Msa0481480 | Msa0699190 | 0.805743 | 1.152071e-49 | -8.615850e-47 |
| Msa0244980 | Msa0699190 | 0.834598 | 2.732325e-56 | -8.615850e-47 |
| Msa0245060 | Msa0699190 | 0.844332 | 8.070852e-59 | -8.615850e-47 |
| Msa0245580 | Msa0699190 | 0.854796 | 9.697405e-62 | -8.615850e-47 |
| Msa0257490 | Msa0699190 | 0.816944 | 4.258451e-52 | -8.615850e-47 |
| Msa0262480 | Msa0699190 | 0.827200 | 1.783885e-54 | -8.615850e-47 |
| Msa0269470 | Msa0699190 | 0.817639 | 2.971231e-52 | -8.615850e-47 |
| Msa0275360 | Msa0699190 | 0.818407 | 1.991664e-52 | -8.615850e-47 |
| Msa0280430 | Msa0699190 | 0.812654 | 3.801827e-51 | -8.615850e-47 |
| Msa0281530 | Msa0699190 | 0.805970 | 1.032038e-49 | -8.615850e-47 |
| Msa0296250 | Msa0699190 | 0.855657 | 5.447525e-62 | -8.615850e-47 |
| Msa0296790 | Msa0699190 | 0.845117 | 4.961375e-59 | -8.615850e-47 |
| Msa0296920 | Msa0699190 | 0.825054 | 5.778568e-54 | -8.615850e-47 |
| Msa0300350 | Msa0699190 | 0.823827 | 1.123239e-53 | -8.615850e-47 |
| Msa0301870 | Msa0699190 | 0.820768 | 5.762118e-53 | -8.615850e-47 |
| Msa0304590 | Msa0699190 | 0.846993 | 1.531267e-59 | -8.615850e-47 |
| Msa0304660 | Msa0699190 | 0.852465 | 4.536266e-61 | -8.615850e-47 |
| Msa0315850 | Msa0699190 | 0.809902 | 1.503854e-50 | -8.615850e-47 |
| Msa0320590 | Msa0699190 | 0.816076 | 6.664215e-52 | -8.615850e-47 |
| Msa0331700 | Msa0699190 | 0.852700 | 3.887713e-61 | -8.615850e-47 |
| Msa0332640 | Msa0699190 | 0.805192 | 1.503267e-49 | -8.615850e-47 |
| Msa0348830 | Msa0699190 | 0.866580 | 2.570808e-65 | -8.615850e-47 |
| Msa0358770 | Msa0699190 | 0.842433 | 2.593879e-58 | -8.615850e-47 |
| Msa0359040 | Msa0699190 | 0.802861 | 4.589351e-49 | -8.615850e-47 |
| Msa0484740 | Msa0699190 | 0.802074 | 6.666049e-49 | -8.615850e-47 |
| Msa0490820 | Msa0699190 | 0.832915 | 7.196455e-56 | -8.615850e-47 |
| Msa0491920 | Msa0699190 | 0.822272 | 2.588929e-53 | -8.615850e-47 |
| Msa0506400 | Msa0699190 | 0.816734 | 4.745845e-52 | -8.615850e-47 |
| Msa0509120 | Msa0699190 | 0.813828 | 2.100128e-51 | -8.615850e-47 |
| Msa0511770 | Msa0699190 | 0.838530 | 2.722157e-57 | -8.615850e-47 |
| Msa0523810 | Msa0699190 | 0.801715 | 7.902052e-49 | -8.615850e-47 |
| Msa0526330 | Msa0699190 | 0.802262 | 6.098952e-49 | -8.615850e-47 |
| Msa0526540 | Msa0699190 | 0.800022 | 1.751710e-48 | -8.615850e-47 |
| Msa0531650 | Msa0699190 | 0.815850 | 7.482967e-52 | -8.615850e-47 |
| Msa0534750 | Msa0699190 | 0.874656 | 5.693483e-68 | -8.615850e-47 |
| Msa0544540 | Msa0699190 | 0.806382 | 8.452175e-50 | -8.615850e-47 |
| Msa0547990 | Msa0699190 | 0.804615 | 1.983722e-49 | -8.615850e-47 |
| Msa0550540 | Msa0699190 | 0.856456 | 3.177262e-62 | -8.615850e-47 |
| Msa0550570 | Msa0699190 | 0.849032 | 4.193368e-60 | -8.615850e-47 |
| Msa0561430 | Msa0699190 | 0.803811 | 2.916575e-49 | -8.615850e-47 |
| Msa0576730 | Msa0699190 | 0.826303 | 2.921686e-54 | -8.615850e-47 |
| Msa0579770 | Msa0699190 | 0.814798 | 1.282507e-51 | -8.615850e-47 |
| Msa0580230 | Msa0699190 | 0.848584 | 5.585399e-60 | -8.615850e-47 |
| Msa0580280 | Msa0699190 | 0.821374 | 4.177993e-53 | -8.615850e-47 |
| Msa0581110 | Msa0699190 | 0.825754 | 3.944874e-54 | -8.615850e-47 |
| Msa0581130 | Msa0699190 | 0.812077 | 5.082478e-51 | -8.615850e-47 |
| Msa0593700 | Msa0699190 | 0.850601 | 1.528096e-60 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0699190 | MtrunA17_Chr4g0052901 | 94.783 | 115 | 6 | 0 | 1 | 115 | 1 | 115 | 1.81e-55 | 168 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 41 sgRNAs with CRISPR-Local
Find 188 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCAAGATCACATTGATAA+AGG | 0.323496 | 4_4:+69820963 | None:intergenic |
| GGTTGTTAGATTACCTGGTT+AGG | 0.333605 | 4_4:+69823876 | None:intergenic |
| CGAAGAGGGAGAAGAGGCTT+AGG | 0.363591 | 4_4:-69823736 | Msa0699190:CDS |
| TTGAAGCCTGTCGGTAGAAT+AGG | 0.372645 | 4_4:-69822377 | Msa0699190:CDS |
| CATATGTGACGCTTTCTACT+TGG | 0.404049 | 4_4:+69822293 | None:intergenic |
| ATACCATTAGCACTCACTAT+TGG | 0.405698 | 4_4:+69822267 | None:intergenic |
| ACTTCCATGGTAGTATTTGA+TGG | 0.421228 | 4_4:+69823608 | None:intergenic |
| TTGGCTTTGAATTACCATTC+CGG | 0.434854 | 4_4:+69822312 | None:intergenic |
| ATTCCAATAGTGAGTGCTAA+TGG | 0.435680 | 4_4:-69822270 | Msa0699190:intron |
| TTTCTATTGTAGGTGGGTCT+CGG | 0.435994 | 4_4:-69821206 | Msa0699190:intron |
| TGAAGCCTGTCGGTAGAATA+GGG | 0.439503 | 4_4:-69822376 | Msa0699190:CDS |
| GCTTCTTTCTTGTCATAGAA+AGG | 0.440776 | 4_4:+69823689 | None:intergenic |
| TTCTTCCCTATTCTACCGAC+AGG | 0.441878 | 4_4:+69822371 | None:intergenic |
| TATTCTACCGACAGGCTTCA+AGG | 0.456173 | 4_4:+69822379 | None:intergenic |
| GGCTGAGAAACTTGAAGCTT+AGG | 0.465133 | 4_4:+69823629 | None:intergenic |
| GTTGTTAGATTACCTGGTTA+GGG | 0.476702 | 4_4:+69823877 | None:intergenic |
| CTAGTTAAGAGTTCATGTAC+TGG | 0.507270 | 4_4:-69821183 | Msa0699190:three_prime_UTR |
| AAGAAGTTTAAAATGGCTAA+AGG | 0.520775 | 4_4:-69822341 | Msa0699190:CDS |
| GTCGCAATACATAATGAAGA+TGG | 0.543896 | 4_4:+69821101 | None:intergenic |
| CAAGATGTGGAGATGGCTGA+TGG | 0.544852 | 4_4:-69822419 | Msa0699190:intron |
| TGAGATCGAAGAGGGAGAAG+AGG | 0.548294 | 4_4:-69823742 | Msa0699190:CDS |
| CTAATCCATGTTCTTGAATG+TGG | 0.554351 | 4_4:-69821042 | Msa0699190:three_prime_UTR |
| GAAGAGGGAGAAGAGGCTTA+GGG | 0.556941 | 4_4:-69823735 | Msa0699190:CDS |
| GCTAAAGGCAACCGCCGGAA+TGG | 0.562871 | 4_4:-69822326 | Msa0699190:CDS |
| AACTATCAACAACAACGCCA+TGG | 0.565201 | 4_4:-69823576 | Msa0699190:CDS |
| AAATTCCACATTCAAGAACA+TGG | 0.565574 | 4_4:+69821037 | None:intergenic |
| TCACTAGTTTATAGTTCGCA+TGG | 0.573126 | 4_4:-69821010 | Msa0699190:three_prime_UTR |
| AGTTGAAGTGGAAACTTCCA+TGG | 0.576743 | 4_4:+69823595 | None:intergenic |
| GAAGTCAATGAGATCGAAGA+GGG | 0.602910 | 4_4:-69823750 | Msa0699190:CDS |
| TAGTTAAGAGTTCATGTACT+GGG | 0.604956 | 4_4:-69821182 | Msa0699190:three_prime_UTR |
| ACTATCAACAACAACGCCAT+GGG | 0.608842 | 4_4:-69823575 | Msa0699190:intron |
| GTTGTTGTTGATAGTTGAAG+TGG | 0.619350 | 4_4:+69823583 | None:intergenic |
| AAATGGCTAAAGGCAACCGC+CGG | 0.626265 | 4_4:-69822331 | Msa0699190:CDS |
| TATTGCGACTTCTATTAACA+CGG | 0.628538 | 4_4:-69821087 | Msa0699190:three_prime_UTR |
| ATTGCGACTTCTATTAACAC+GGG | 0.637170 | 4_4:-69821086 | Msa0699190:three_prime_UTR |
| AAGACTTCCTTGAAGCCTGT+CGG | 0.641141 | 4_4:-69822386 | Msa0699190:CDS |
| AACAGTGGTCATGAATTGAA+CGG | 0.649902 | 4_4:+69821158 | None:intergenic |
| CGAAGTCAATGAGATCGAAG+AGG | 0.658126 | 4_4:-69823751 | Msa0699190:CDS |
| TCAGCCATCAAATACTACCA+TGG | 0.659640 | 4_4:-69823612 | Msa0699190:CDS |
| TTCGAAGCTAAACCCTAACC+AGG | 0.676394 | 4_4:-69823889 | Msa0699190:intron |
| GCTTTGAATTACCATTCCGG+CGG | 0.686125 | 4_4:+69822315 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAAAATAATATAAAATT+GGG | + | chr4_4:69822260-69822279 | None:intergenic | 0.0% |
| !! | TAATTAAAATAATATAAAAT+TGG | + | chr4_4:69822261-69822280 | None:intergenic | 0.0% |
| !! | AATAATAAAAAAGAAAAAAG+TGG | + | chr4_4:69821218-69821237 | None:intergenic | 10.0% |
| !!! | ATTTATCCTATTTAAAATAT+TGG | + | chr4_4:69821567-69821586 | None:intergenic | 10.0% |
| !! | AGTAATAATATATCTATCTA+TGG | + | chr4_4:69821753-69821772 | None:intergenic | 15.0% |
| !!! | TTTTTCTTTAATTTCATAGT+TGG | - | chr4_4:69822072-69822091 | Msa0699190:intron | 15.0% |
| !! | ATTGAAAAAGAAGTTTAAAA+TGG | - | chr4_4:69822417-69822436 | Msa0699190:CDS | 15.0% |
| !!! | TTTTGTGAAATTATTTAAGT+GGG | - | chr4_4:69823134-69823153 | Msa0699190:intron | 15.0% |
| !!! | TAACTTTTGTTGAATATATA+TGG | - | chr4_4:69823844-69823863 | Msa0699190:intron | 15.0% |
| !!! | AGATCGAAATATAATTTTAT+TGG | - | chr4_4:69823877-69823896 | Msa0699190:intron | 15.0% |
| !! | GAAAATTGTATAAGTTAAAG+AGG | + | chr4_4:69820932-69820951 | None:intergenic | 20.0% |
| !! | GAAATTGAAAGAGTAAAAAA+TGG | - | chr4_4:69820991-69821010 | Msa0699190:three_prime_UTR | 20.0% |
| !! | TATTTACTTAGTACAAATGT+AGG | - | chr4_4:69821311-69821330 | Msa0699190:intron | 20.0% |
| !! | ATTTACTTAGTACAAATGTA+GGG | - | chr4_4:69821312-69821331 | Msa0699190:intron | 20.0% |
| !! | ATATATCTATCTATGGAATT+GGG | + | chr4_4:69821746-69821765 | None:intergenic | 20.0% |
| !! | AATATATCTATCTATGGAAT+TGG | + | chr4_4:69821747-69821766 | None:intergenic | 20.0% |
| !!! | AAAACAAAAATGGGTTTTTA+GGG | + | chr4_4:69821990-69822009 | None:intergenic | 20.0% |
| !! | ATAATCATAATAGCTTCAAA+AGG | + | chr4_4:69822021-69822040 | None:intergenic | 20.0% |
| !! | TTTAATTATGAATTGGCATT+TGG | - | chr4_4:69822273-69822292 | Msa0699190:exon | 20.0% |
| !! | CACGATAAAAAATAAAAATG+TGG | + | chr4_4:69822546-69822565 | None:intergenic | 20.0% |
| !!! | TTTTTCTTTCTTAAATCACA+TGG | + | chr4_4:69822666-69822685 | None:intergenic | 20.0% |
| !! | ATAGATATTTAACTAGTTCA+AGG | + | chr4_4:69822870-69822889 | None:intergenic | 20.0% |
| !!! | CTTAAATGGATATATTTTTC+TGG | - | chr4_4:69823026-69823045 | Msa0699190:intron | 20.0% |
| !!! | CTTTTGTGAAATTATTTAAG+TGG | - | chr4_4:69823133-69823152 | Msa0699190:intron | 20.0% |
| !! | TTTGTGAAATTATTTAAGTG+GGG | - | chr4_4:69823135-69823154 | Msa0699190:intron | 20.0% |
| !!! | TTATATTTTCCAAAAACTAG+AGG | - | chr4_4:69823170-69823189 | Msa0699190:intron | 20.0% |
| !!! | AATAAATTGTAACTGATTTG+TGG | + | chr4_4:69823236-69823255 | None:intergenic | 20.0% |
| !! | GTTACAATTTATTTGTTTGT+AGG | - | chr4_4:69823243-69823262 | Msa0699190:intron | 20.0% |
| !! | TTTATTTGTTTGTAGGTATT+TGG | - | chr4_4:69823250-69823269 | Msa0699190:intron | 20.0% |
| !! | TTTAATCAAAAATTGAACAG+TGG | + | chr4_4:69823625-69823644 | None:intergenic | 20.0% |
| !! | ATGTTATCTCTTTAGTTTAG+CGG | - | chr4_4:69821251-69821270 | Msa0699190:intron | 25.0% |
| ! | GCAAAAATCAACATTTACAA+TGG | - | chr4_4:69821337-69821356 | Msa0699190:intron | 25.0% |
| ! | AAAAAATAAGCCAATCCAAA+CGG | - | chr4_4:69821539-69821558 | Msa0699190:intron | 25.0% |
| ! | AACTACTAAAACACTAAAAG+TGG | + | chr4_4:69821665-69821684 | None:intergenic | 25.0% |
| ! | ATAGTCCTTTCAAATTGAAT+TGG | - | chr4_4:69821916-69821935 | Msa0699190:intron | 25.0% |
| ! | TAGTCCTTTCAAATTGAATT+GGG | - | chr4_4:69821917-69821936 | Msa0699190:intron | 25.0% |
| ! | AAAACCCAATTCAATTTGAA+AGG | + | chr4_4:69821924-69821943 | None:intergenic | 25.0% |
| !!! | GAAAACAAAAATGGGTTTTT+AGG | + | chr4_4:69821991-69822010 | None:intergenic | 25.0% |
| ! | GCTTAGAAGAAAACAAAAAT+GGG | + | chr4_4:69821999-69822018 | None:intergenic | 25.0% |
| ! | TTCAAAAGGAAAAACAACAA+AGG | + | chr4_4:69822138-69822157 | None:intergenic | 25.0% |
| !!! | GTTTTTGAATTTTCAAGATG+TGG | - | chr4_4:69822333-69822352 | Msa0699190:CDS | 25.0% |
| !! | AAGAAGTTTAAAATGGCTAA+AGG | - | chr4_4:69822424-69822443 | Msa0699190:intron | 25.0% |
| ! | ATAAAAATGTGGCAGAAAAT+AGG | + | chr4_4:69822535-69822554 | None:intergenic | 25.0% |
| ! | TACATGAGTAAAGAAAACTA+AGG | + | chr4_4:69822586-69822605 | None:intergenic | 25.0% |
| !! | GTCCAAGCTATATAAATTTT+GGG | + | chr4_4:69822768-69822787 | None:intergenic | 25.0% |
| !! | TGTCCAAGCTATATAAATTT+TGG | + | chr4_4:69822769-69822788 | None:intergenic | 25.0% |
| !! | CTATTGCATCATTTTATTGT+CGG | - | chr4_4:69822886-69822905 | Msa0699190:intron | 25.0% |
| !!! | TTTTATTGTCGGTTAAACTT+CGG | - | chr4_4:69822897-69822916 | Msa0699190:intron | 25.0% |
| ! | ATGTAATTCTGTAGCTTAAA+TGG | - | chr4_4:69823012-69823031 | Msa0699190:intron | 25.0% |
| !! | AAAAGTTACTTTCATTGTTG+AGG | + | chr4_4:69823118-69823137 | None:intergenic | 25.0% |
| ! | GATTGTTTATCTGATTCATT+AGG | - | chr4_4:69823275-69823294 | Msa0699190:intron | 25.0% |
| ! | GGATAAGTTAAAAAGAGTAA+AGG | + | chr4_4:69823401-69823420 | None:intergenic | 25.0% |
| GAGGAATGAAATAGAAGAAA+GGG | + | chr4_4:69820913-69820932 | None:intergenic | 30.0% | |
| AGAGGAATGAAATAGAAGAA+AGG | + | chr4_4:69820914-69820933 | None:intergenic | 30.0% | |
| ! | TTGTTTGTTGAAATTGAAGC+AGG | - | chr4_4:69820963-69820982 | Msa0699190:three_prime_UTR | 30.0% |
| AAAAATAAGCCAATCGAAAC+GGG | + | chr4_4:69821364-69821383 | None:intergenic | 30.0% | |
| CAAAAATAAGCCAATCGAAA+CGG | + | chr4_4:69821365-69821384 | None:intergenic | 30.0% | |
| TGTTATTCATAAGCTTGTCA+AGG | + | chr4_4:69821491-69821510 | None:intergenic | 30.0% | |
| AAAAATAAGCCAATCCAAAC+GGG | - | chr4_4:69821540-69821559 | Msa0699190:intron | 30.0% | |
| ! | TTTAAAATATTGGACCCGTT+TGG | + | chr4_4:69821557-69821576 | None:intergenic | 30.0% |
| !! | ACGGGTCCAATATTTTAAAT+AGG | - | chr4_4:69821558-69821577 | Msa0699190:intron | 30.0% |
| ! | CCATCACTCATTTTCTATAA+GGG | + | chr4_4:69821608-69821627 | None:intergenic | 30.0% |
| ! | TCCATCACTCATTTTCTATA+AGG | + | chr4_4:69821609-69821628 | None:intergenic | 30.0% |
| !!! | TTGTGTTGTTTGTTTTGGAA+GGG | + | chr4_4:69821783-69821802 | None:intergenic | 30.0% |
| !!! | TTTGTGTTGTTTGTTTTGGA+AGG | + | chr4_4:69821784-69821803 | None:intergenic | 30.0% |
| !!! | CTTGTTTGTGTTGTTTGTTT+TGG | + | chr4_4:69821788-69821807 | None:intergenic | 30.0% |
| GAAAGAGAAAGAGAAAAAGA+AGG | + | chr4_4:69821892-69821911 | None:intergenic | 30.0% | |
| GGCTTAGAAGAAAACAAAAA+TGG | + | chr4_4:69822000-69822019 | None:intergenic | 30.0% | |
| ! | TTTCATAGTTGGAGTTTTCT+TGG | - | chr4_4:69822083-69822102 | Msa0699190:intron | 30.0% |
| ATTCTCATACATAAAGGTGA+TGG | + | chr4_4:69822609-69822628 | None:intergenic | 30.0% | |
| GTAGAGATTCTCATACATAA+AGG | + | chr4_4:69822615-69822634 | None:intergenic | 30.0% | |
| ! | GTAGTGGAATAAGTAAGTTA+TGG | - | chr4_4:69822713-69822732 | Msa0699190:intron | 30.0% |
| CTCCCAAAATTTATATAGCT+TGG | - | chr4_4:69822763-69822782 | Msa0699190:intron | 30.0% | |
| TATTTAACTAGTTCAAGGCT+TGG | + | chr4_4:69822865-69822884 | None:intergenic | 30.0% | |
| AGTACTAATGCTAAGTGAAA+GGG | + | chr4_4:69822975-69822994 | None:intergenic | 30.0% | |
| !!! | CCTTTAATACCTCTAGTTTT+TGG | + | chr4_4:69823182-69823201 | None:intergenic | 30.0% |
| !! | CCAAAAACTAGAGGTATTAA+AGG | - | chr4_4:69823179-69823198 | Msa0699190:intron | 30.0% |
| ATTTGTTTGTAGGTATTTGG+AGG | - | chr4_4:69823253-69823272 | Msa0699190:intron | 30.0% | |
| TAATAGCTGTGTATCAAATC+TGG | - | chr4_4:69823330-69823349 | Msa0699190:intron | 30.0% | |
| CAAACCAAAGTATGGTAAAA+AGG | + | chr4_4:69823428-69823447 | None:intergenic | 30.0% | |
| GTAATTGTCAAACCAAAGTA+TGG | + | chr4_4:69823436-69823455 | None:intergenic | 30.0% | |
| !! | TTTGGTTTGACAATTACTGA+CGG | - | chr4_4:69823439-69823458 | Msa0699190:intron | 30.0% |
| CTTTGATACCTTTCTATTGT+AGG | - | chr4_4:69823549-69823568 | Msa0699190:intron | 30.0% | |
| TAGTTAAGAGTTCATGTACT+GGG | - | chr4_4:69823583-69823602 | Msa0699190:CDS | 30.0% | |
| TATTGCGACTTCTATTAACA+CGG | - | chr4_4:69823678-69823697 | Msa0699190:CDS | 30.0% | |
| AAATTCCACATTCAAGAACA+TGG | + | chr4_4:69823731-69823750 | None:intergenic | 30.0% | |
| CTTCAAGATCACATTGATAA+AGG | + | chr4_4:69823805-69823824 | None:intergenic | 30.0% | |
| GTTGTTAGATTACCTGGTTA+GGG | + | chr4_4:69820891-69820910 | None:intergenic | 35.0% | |
| GCTTCTTTCTTGTCATAGAA+AGG | + | chr4_4:69821079-69821098 | None:intergenic | 35.0% | |
| ACTTCCATGGTAGTATTTGA+TGG | + | chr4_4:69821160-69821179 | None:intergenic | 35.0% | |
| !! | GTTGTTGTTGATAGTTGAAG+TGG | + | chr4_4:69821185-69821204 | None:intergenic | 35.0% |
| AAAGAAAAAAGTGGTACCCA+TGG | + | chr4_4:69821209-69821228 | None:intergenic | 35.0% | |
| CCCTTATAGAAAATGAGTGA+TGG | - | chr4_4:69821605-69821624 | Msa0699190:intron | 35.0% | |
| ACACTAAAAGTGGAGAACAA+AGG | + | chr4_4:69821655-69821674 | None:intergenic | 35.0% | |
| AACAACACAAACAAGAAGCT+TGG | - | chr4_4:69821793-69821812 | Msa0699190:intron | 35.0% | |
| ! | TGCCAATACCTTTTCATCAA+AGG | - | chr4_4:69821829-69821848 | Msa0699190:intron | 35.0% |
| ! | GCCAATACCTTTTCATCAAA+GGG | - | chr4_4:69821830-69821849 | Msa0699190:intron | 35.0% |
| ! | CCAATACCTTTTCATCAAAG+GGG | - | chr4_4:69821831-69821850 | Msa0699190:intron | 35.0% |
| !! | TTTTGAAAGATCTGTCACAG+TGG | + | chr4_4:69821950-69821969 | None:intergenic | 35.0% |
| !! | GAATTTTCAAGATGTGGAGA+TGG | - | chr4_4:69822339-69822358 | Msa0699190:CDS | 35.0% |
| !! | TTGGCTTTGAATTACCATTC+CGG | + | chr4_4:69822456-69822475 | None:intergenic | 35.0% |
| ATTCCAATAGTGAGTGCTAA+TGG | - | chr4_4:69822495-69822514 | Msa0699190:intron | 35.0% | |
| ATACCATTAGCACTCACTAT+TGG | + | chr4_4:69822501-69822520 | None:intergenic | 35.0% | |
| CTAAGGCATGAAATATGCAA+TGG | + | chr4_4:69822569-69822588 | None:intergenic | 35.0% | |
| TTACTTATTCCACTACTGAC+AGG | + | chr4_4:69822709-69822728 | None:intergenic | 35.0% | |
| GTGGAATAAGTAAGTTATGG+TGG | - | chr4_4:69822716-69822735 | Msa0699190:intron | 35.0% | |
| ! | TTAAGTTACAGGGCATTTAG+GGG | + | chr4_4:69822826-69822845 | None:intergenic | 35.0% |
| ! | GTTAAGTTACAGGGCATTTA+GGG | + | chr4_4:69822827-69822846 | None:intergenic | 35.0% |
| GAGTACTAATGCTAAGTGAA+AGG | + | chr4_4:69822976-69822995 | None:intergenic | 35.0% | |
| AAAGTATGGTAAAAAGGACG+AGG | + | chr4_4:69823422-69823441 | None:intergenic | 35.0% | |
| ! | TCGTCCTTTTTACCATACTT+TGG | - | chr4_4:69823421-69823440 | Msa0699190:intron | 35.0% |
| ! | TTGGTTTGACAATTACTGAC+GGG | - | chr4_4:69823440-69823459 | Msa0699190:intron | 35.0% |
| !! | GATGTTGTGCAGTTTTAATG+AGG | + | chr4_4:69823481-69823500 | None:intergenic | 35.0% |
| TGATACCTTTCTATTGTAGG+TGG | - | chr4_4:69823552-69823571 | Msa0699190:intron | 35.0% | |
| GATACCTTTCTATTGTAGGT+GGG | - | chr4_4:69823553-69823572 | Msa0699190:intron | 35.0% | |
| CTAGTTAAGAGTTCATGTAC+TGG | - | chr4_4:69823582-69823601 | Msa0699190:CDS | 35.0% | |
| AACAGTGGTCATGAATTGAA+CGG | + | chr4_4:69823610-69823629 | None:intergenic | 35.0% | |
| GTCGCAATACATAATGAAGA+TGG | + | chr4_4:69823667-69823686 | None:intergenic | 35.0% | |
| ATTGCGACTTCTATTAACAC+GGG | - | chr4_4:69823679-69823698 | Msa0699190:CDS | 35.0% | |
| CTAATCCATGTTCTTGAATG+TGG | - | chr4_4:69823723-69823742 | Msa0699190:CDS | 35.0% | |
| ! | TCACTAGTTTATAGTTCGCA+TGG | - | chr4_4:69823755-69823774 | Msa0699190:CDS | 35.0% |
| GGTTGTTAGATTACCTGGTT+AGG | + | chr4_4:69820892-69820911 | None:intergenic | 40.0% | |
| GAAAGGGTTGTTAGATTACC+TGG | + | chr4_4:69820897-69820916 | None:intergenic | 40.0% | |
| GTTGAAATTGAAGCAGGAAG+TGG | - | chr4_4:69820969-69820988 | Msa0699190:three_prime_UTR | 40.0% | |
| GAAGTCAATGAGATCGAAGA+GGG | - | chr4_4:69821015-69821034 | Msa0699190:three_prime_UTR | 40.0% | |
| TCAGCCATCAAATACTACCA+TGG | - | chr4_4:69821153-69821172 | Msa0699190:three_prime_UTR | 40.0% | |
| AGTTGAAGTGGAAACTTCCA+TGG | + | chr4_4:69821173-69821192 | None:intergenic | 40.0% | |
| AACTATCAACAACAACGCCA+TGG | - | chr4_4:69821189-69821208 | Msa0699190:three_prime_UTR | 40.0% | |
| ACTATCAACAACAACGCCAT+GGG | - | chr4_4:69821190-69821209 | Msa0699190:three_prime_UTR | 40.0% | |
| AATATTGGACCCGTTTGGAT+TGG | + | chr4_4:69821552-69821571 | None:intergenic | 40.0% | |
| TAATCACTGCCCTACTCTTT+CGG | + | chr4_4:69821696-69821715 | None:intergenic | 40.0% | |
| ACAAGAAGCTTGGAACTTGA+AGG | - | chr4_4:69821803-69821822 | Msa0699190:intron | 40.0% | |
| ! | CCCCTTTGATGAAAAGGTAT+TGG | + | chr4_4:69821834-69821853 | None:intergenic | 40.0% |
| ! | ACCTTTTCATCAAAGGGGTT+TGG | - | chr4_4:69821836-69821855 | Msa0699190:intron | 40.0% |
| !!! | GGCACTGATTTTGTTTTTGC+CGG | - | chr4_4:69822104-69822123 | Msa0699190:intron | 40.0% |
| !!! | GCACTGATTTTGTTTTTGCC+GGG | - | chr4_4:69822105-69822124 | Msa0699190:intron | 40.0% |
| !!! | CACTGATTTTGTTTTTGCCG+GGG | - | chr4_4:69822106-69822125 | Msa0699190:intron | 40.0% |
| !!! | AACAACAAAGGTGTTTTCCC+CGG | + | chr4_4:69822126-69822145 | None:intergenic | 40.0% |
| !! | TTCCTTTTGAAGATTCAGCG+CGG | - | chr4_4:69822147-69822166 | Msa0699190:intron | 40.0% |
| TTCGTTGGAGTAGTCAATCA+CGG | + | chr4_4:69822195-69822214 | None:intergenic | 40.0% | |
| ATAAAACACGCTGTCTTCGT+TGG | + | chr4_4:69822210-69822229 | None:intergenic | 40.0% | |
| TGAATTGGCATTTGGTTGCT+TGG | - | chr4_4:69822281-69822300 | Msa0699190:exon | 40.0% | |
| CATATGTGACGCTTTCTACT+TGG | + | chr4_4:69822475-69822494 | None:intergenic | 40.0% | |
| CACTACTGACAGGATAAAGA+TGG | + | chr4_4:69822699-69822718 | None:intergenic | 40.0% | |
| CATCTTTATCCTGTCAGTAG+TGG | - | chr4_4:69822697-69822716 | Msa0699190:intron | 40.0% | |
| TTTGGGAGCAGCATATGTAA+TGG | + | chr4_4:69822751-69822770 | None:intergenic | 40.0% | |
| ! | GGTTAAGTTACAGGGCATTT+AGG | + | chr4_4:69822828-69822847 | None:intergenic | 40.0% |
| CTGGCAGTATTTAGGAACTA+AGG | + | chr4_4:69823066-69823085 | None:intergenic | 40.0% | |
| ! | CAAATGTGCTGGCAGTATTT+AGG | + | chr4_4:69823074-69823093 | None:intergenic | 40.0% |
| AGGTATTAAAGGAAAAGCCG+AGG | - | chr4_4:69823190-69823209 | Msa0699190:intron | 40.0% | |
| GGTATTAAAGGAAAAGCCGA+GGG | - | chr4_4:69823191-69823210 | Msa0699190:intron | 40.0% | |
| TTTCTATTGTAGGTGGGTCT+CGG | - | chr4_4:69823559-69823578 | Msa0699190:intron | 40.0% | |
| TTCGAAGCTAAACCCTAACC+AGG | - | chr4_4:69820876-69820895 | Msa0699190:three_prime_UTR | 45.0% | |
| CGAAGTCAATGAGATCGAAG+AGG | - | chr4_4:69821014-69821033 | Msa0699190:three_prime_UTR | 45.0% | |
| GGCTGAGAAACTTGAAGCTT+AGG | + | chr4_4:69821139-69821158 | None:intergenic | 45.0% | |
| TACAATGGACCCGTTTCGAT+TGG | - | chr4_4:69821352-69821371 | Msa0699190:intron | 45.0% | |
| GGCAGTGATTAGAAAGAGAG+AGG | - | chr4_4:69821705-69821724 | Msa0699190:intron | 45.0% | |
| GCCAAACCCCTTTGATGAAA+AGG | + | chr4_4:69821840-69821859 | None:intergenic | 45.0% | |
| ! | TCATCAAAGGGGTTTGGCTT+TGG | - | chr4_4:69821842-69821861 | Msa0699190:intron | 45.0% |
| AAGACTTCCTTGAAGCCTGT+CGG | - | chr4_4:69822379-69822398 | Msa0699190:CDS | 45.0% | |
| TATTCTACCGACAGGCTTCA+AGG | + | chr4_4:69822389-69822408 | None:intergenic | 45.0% | |
| TTGAAGCCTGTCGGTAGAAT+AGG | - | chr4_4:69822388-69822407 | Msa0699190:CDS | 45.0% | |
| TGAAGCCTGTCGGTAGAATA+GGG | - | chr4_4:69822389-69822408 | Msa0699190:CDS | 45.0% | |
| TTCTTCCCTATTCTACCGAC+AGG | + | chr4_4:69822397-69822416 | None:intergenic | 45.0% | |
| ! | GCTTTGAATTACCATTCCGG+CGG | + | chr4_4:69822453-69822472 | None:intergenic | 45.0% |
| GGTGTGGAGGTTAAGTTACA+GGG | + | chr4_4:69822836-69822855 | None:intergenic | 45.0% | |
| TGGTGTGGAGGTTAAGTTAC+AGG | + | chr4_4:69822837-69822856 | None:intergenic | 45.0% | |
| TAGTTCAAGGCTTGGCACAA+TGG | + | chr4_4:69822857-69822876 | None:intergenic | 45.0% | |
| TACTGCCAGCACATTTGACT+CGG | - | chr4_4:69823077-69823096 | Msa0699190:intron | 45.0% | |
| GAGACCCACCTACAATAGAA+AGG | + | chr4_4:69823560-69823579 | None:intergenic | 45.0% | |
| !!! | ATATTATTTTAATTATGAAT+TGG | - | chr4_4:69822266-69822285 | Msa0699190:intron | 5.0% |
| TGAGATCGAAGAGGGAGAAG+AGG | - | chr4_4:69821023-69821042 | Msa0699190:three_prime_UTR | 50.0% | |
| GAAGAGGGAGAAGAGGCTTA+GGG | - | chr4_4:69821030-69821049 | Msa0699190:three_prime_UTR | 50.0% | |
| ! | TTTTGCCGAGCCGAAAGAGT+AGG | - | chr4_4:69821683-69821702 | Msa0699190:intron | 50.0% |
| TTTGCCGAGCCGAAAGAGTA+GGG | - | chr4_4:69821684-69821703 | Msa0699190:intron | 50.0% | |
| AGAAAGAGAGAGGACTCGTG+TGG | - | chr4_4:69821715-69821734 | Msa0699190:intron | 50.0% | |
| GAAAGAGAGAGGACTCGTGT+GGG | - | chr4_4:69821716-69821735 | Msa0699190:intron | 50.0% | |
| GTCCGCGCTGAATCTTCAAA+AGG | + | chr4_4:69822152-69822171 | None:intergenic | 50.0% | |
| CAAGATGTGGAGATGGCTGA+TGG | - | chr4_4:69822346-69822365 | Msa0699190:CDS | 50.0% | |
| AAATGGCTAAAGGCAACCGC+CGG | - | chr4_4:69822434-69822453 | Msa0699190:intron | 50.0% | |
| GACAACCGAGTCAAATGTGC+TGG | + | chr4_4:69823085-69823104 | None:intergenic | 50.0% | |
| CGAAGAGGGAGAAGAGGCTT+AGG | - | chr4_4:69821029-69821048 | Msa0699190:three_prime_UTR | 55.0% | |
| ACTGCCCTACTCTTTCGGCT+CGG | + | chr4_4:69821691-69821710 | None:intergenic | 55.0% | |
| CAAGGCTTGGCACAATGGTG+TGG | + | chr4_4:69822852-69822871 | None:intergenic | 55.0% | |
| GCCAACGTATTCAGAGCCCT+CGG | + | chr4_4:69823210-69823229 | None:intergenic | 55.0% | |
| GCTAAAGGCAACCGCCGGAA+TGG | - | chr4_4:69822439-69822458 | Msa0699190:intron | 60.0% | |
| GGCTTGGCACAATGGTGTGG+AGG | + | chr4_4:69822849-69822868 | None:intergenic | 60.0% | |
| !! | GCCGAGGGCTCTGAATACGT+TGG | - | chr4_4:69823206-69823225 | Msa0699190:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 69820868 | 69823919 | 69820868 | ID=Msa0699190;Name=Msa0699190 |
| chr4_4 | mRNA | 69820868 | 69823919 | 69820868 | ID=Msa0699190-mRNA-1;Parent=Msa0699190;Name=Msa0699190-mRNA-1;_AED=0.05;_eAED=0.05;_QI=55|1|1|1|0.33|0|4|370|115 |
| chr4_4 | exon | 69820868 | 69821216 | 69820868 | ID=Msa0699190-mRNA-1:exon:21028;Parent=Msa0699190-mRNA-1 |
| chr4_4 | exon | 69822271 | 69822437 | 69822271 | ID=Msa0699190-mRNA-1:exon:21027;Parent=Msa0699190-mRNA-1 |
| chr4_4 | exon | 69823576 | 69823802 | 69823576 | ID=Msa0699190-mRNA-1:exon:21026;Parent=Msa0699190-mRNA-1 |
| chr4_4 | exon | 69823890 | 69823919 | 69823890 | ID=Msa0699190-mRNA-1:exon:21025;Parent=Msa0699190-mRNA-1 |
| chr4_4 | five_prime_UTR | 69823890 | 69823919 | 69823890 | ID=Msa0699190-mRNA-1:five_prime_utr;Parent=Msa0699190-mRNA-1 |
| chr4_4 | five_prime_UTR | 69823778 | 69823802 | 69823778 | ID=Msa0699190-mRNA-1:five_prime_utr;Parent=Msa0699190-mRNA-1 |
| chr4_4 | CDS | 69823576 | 69823777 | 69823576 | ID=Msa0699190-mRNA-1:cds;Parent=Msa0699190-mRNA-1 |
| chr4_4 | CDS | 69822292 | 69822437 | 69822292 | ID=Msa0699190-mRNA-1:cds;Parent=Msa0699190-mRNA-1 |
| chr4_4 | three_prime_UTR | 69822271 | 69822291 | 69822271 | ID=Msa0699190-mRNA-1:three_prime_utr;Parent=Msa0699190-mRNA-1 |
| chr4_4 | three_prime_UTR | 69820868 | 69821216 | 69820868 | ID=Msa0699190-mRNA-1:three_prime_utr;Parent=Msa0699190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
