Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0319330 | XP_003594686.1 | 99.037 | 727 | 7 | 0 | 1 | 727 | 1 | 727 | 0.0 | 1502 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0319330 | sp|Q6Y2X3|DJC14_HUMAN | 28.571 | 245 | 134 | 10 | 395 | 631 | 409 | 620 | 1.31e-18 | 94.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000590 | Msa0319330 | 0.810542 | 1.094332e-50 | -8.615850e-47 |
| Msa0006880 | Msa0319330 | 0.816173 | 6.338389e-52 | -8.615850e-47 |
| Msa0010770 | Msa0319330 | 0.805275 | 1.443854e-49 | -8.615850e-47 |
| Msa0036370 | Msa0319330 | 0.804962 | 1.679381e-49 | -8.615850e-47 |
| Msa0047250 | Msa0319330 | 0.806314 | 8.734373e-50 | -8.615850e-47 |
| Msa0053700 | Msa0319330 | 0.804307 | 2.299746e-49 | -8.615850e-47 |
| Msa0055070 | Msa0319330 | 0.818085 | 2.355721e-52 | -8.615850e-47 |
| Msa0072170 | Msa0319330 | 0.809084 | 2.253541e-50 | -8.615850e-47 |
| Msa0090030 | Msa0319330 | 0.815680 | 8.167030e-52 | -8.615850e-47 |
| Msa0094010 | Msa0319330 | 0.819458 | 1.149201e-52 | -8.615850e-47 |
| Msa0097950 | Msa0319330 | 0.805918 | 1.058608e-49 | -8.615850e-47 |
| Msa0101020 | Msa0319330 | 0.818137 | 2.293222e-52 | -8.615850e-47 |
| Msa0101180 | Msa0319330 | 0.804527 | 2.069568e-49 | -8.615850e-47 |
| Msa0108870 | Msa0319330 | 0.818050 | 2.399368e-52 | -8.615850e-47 |
| Msa0120540 | Msa0319330 | 0.806007 | 1.013750e-49 | -8.615850e-47 |
| Msa0145110 | Msa0319330 | 0.825987 | 3.472918e-54 | -8.615850e-47 |
| Msa0164370 | Msa0319330 | 0.815558 | 8.692195e-52 | -8.615850e-47 |
| Msa0194720 | Msa0319330 | 0.807143 | 5.836833e-50 | -8.615850e-47 |
| Msa0198940 | Msa0319330 | 0.804118 | 2.518499e-49 | -8.615850e-47 |
| Msa0199570 | Msa0319330 | 0.988620 | 9.770534e-175 | -8.615850e-47 |
| Msa0208810 | Msa0319330 | 0.824196 | 9.200351e-54 | -8.615850e-47 |
| Msa0229360 | Msa0319330 | 0.830531 | 2.786453e-55 | -8.615850e-47 |
| Msa0241740 | Msa0319330 | 0.804467 | 2.130516e-49 | -8.615850e-47 |
| Msa0242760 | Msa0319330 | 0.808004 | 3.832933e-50 | -8.615850e-47 |
| Msa0247060 | Msa0319330 | 0.804520 | 2.077091e-49 | -8.615850e-47 |
| Msa0267870 | Msa0319330 | 0.824636 | 7.251149e-54 | -8.615850e-47 |
| Msa0319330 | Msa0322590 | 0.808323 | 3.276624e-50 | -8.615850e-47 |
| Msa0319330 | Msa0337510 | 0.826924 | 2.077234e-54 | -8.615850e-47 |
| Msa0319330 | Msa0347550 | 0.809944 | 1.472848e-50 | -8.615850e-47 |
| Msa0319330 | Msa0364990 | 0.807363 | 5.242823e-50 | -8.615850e-47 |
| Msa0319330 | Msa0379600 | 0.805255 | 1.458204e-49 | -8.615850e-47 |
| Msa0319330 | Msa0384670 | 0.810959 | 8.891542e-51 | -8.615850e-47 |
| Msa0319330 | Msa0414020 | 0.823658 | 1.230538e-53 | -8.615850e-47 |
| Msa0319330 | Msa0416400 | 0.804929 | 1.706062e-49 | -8.615850e-47 |
| Msa0319330 | Msa0419520 | 0.822864 | 1.885839e-53 | -8.615850e-47 |
| Msa0319330 | Msa0431770 | 0.845311 | 4.397064e-59 | -8.615850e-47 |
| Msa0319330 | Msa0439890 | 0.810948 | 8.941942e-51 | -8.615850e-47 |
| Msa0319330 | Msa0449820 | 0.824956 | 6.094991e-54 | -8.615850e-47 |
| Msa0319330 | Msa0455380 | 0.815682 | 8.158043e-52 | -8.615850e-47 |
| Msa0319330 | Msa0458640 | 0.817398 | 3.367332e-52 | -8.615850e-47 |
| Msa0319330 | Msa0478580 | 0.822934 | 1.815564e-53 | -8.615850e-47 |
| Msa0319330 | Msa0514610 | 0.801784 | 7.646200e-49 | -8.615850e-47 |
| Msa0319330 | Msa0534080 | 0.803169 | 3.962940e-49 | -8.615850e-47 |
| Msa0319330 | Msa0550540 | 0.802803 | 4.717069e-49 | -8.615850e-47 |
| Msa0319330 | Msa0550570 | 0.805416 | 1.349102e-49 | -8.615850e-47 |
| Msa0319330 | Msa0578090 | 0.826965 | 2.030295e-54 | -8.615850e-47 |
| Msa0319330 | Msa0580640 | 0.805604 | 1.231988e-49 | -8.615850e-47 |
| Msa0319330 | Msa0588120 | 0.806160 | 9.415879e-50 | -8.615850e-47 |
| Msa0319330 | Msa0588220 | 0.803146 | 4.006955e-49 | -8.615850e-47 |
| Msa0319330 | Msa0609000 | 0.801481 | 8.824714e-49 | -8.615850e-47 |
| Msa0319330 | Msa0609220 | 0.810739 | 9.923822e-51 | -8.615850e-47 |
| Msa0319330 | Msa0610500 | 0.811243 | 7.718877e-51 | -8.615850e-47 |
| Msa0319330 | Msa0618930 | 0.810086 | 1.372750e-50 | -8.615850e-47 |
| Msa0319330 | Msa0619920 | 0.817088 | 3.953488e-52 | -8.615850e-47 |
| Msa0319330 | Msa0620330 | 0.805783 | 1.129942e-49 | -8.615850e-47 |
| Msa0319330 | Msa0651150 | 0.820352 | 7.176535e-53 | -8.615850e-47 |
| Msa0319330 | Msa0659990 | 0.802340 | 5.878228e-49 | -8.615850e-47 |
| Msa0319330 | Msa0675990 | 0.817424 | 3.322078e-52 | -8.615850e-47 |
| Msa0319330 | Msa0687230 | 0.852014 | 6.094880e-61 | -8.615850e-47 |
| Msa0319330 | Msa0699810 | 0.807905 | 4.022277e-50 | -8.615850e-47 |
| Msa0319330 | Msa0700230 | 0.800355 | 1.498646e-48 | -8.615850e-47 |
| Msa0319330 | Msa0704800 | 0.809353 | 1.972850e-50 | -8.615850e-47 |
| Msa0319330 | Msa0706390 | 0.835429 | 1.686535e-56 | -8.615850e-47 |
| Msa0319330 | Msa0713460 | 0.811418 | 7.072232e-51 | -8.615850e-47 |
| Msa0319330 | Msa0744090 | 0.821816 | 3.302109e-53 | -8.615850e-47 |
| Msa0319330 | Msa0788110 | 0.811275 | 7.593634e-51 | -8.615850e-47 |
| Msa0319330 | Msa0795660 | 0.807714 | 4.417566e-50 | -8.615850e-47 |
| Msa0319330 | Msa0822170 | 0.818428 | 1.970525e-52 | -8.615850e-47 |
| Msa0319330 | Msa0825270 | 0.800857 | 1.183671e-48 | -8.615850e-47 |
| Msa0319330 | Msa0825280 | 0.827603 | 1.428121e-54 | -8.615850e-47 |
| Msa0319330 | Msa0843120 | -0.803302 | 3.719988e-49 | -8.615850e-47 |
| Msa0319330 | Msa0851470 | 0.820474 | 6.728068e-53 | -8.615850e-47 |
| Msa0319330 | Msa0853950 | 0.808745 | 2.662897e-50 | -8.615850e-47 |
| Msa0319330 | Msa0869010 | 0.811791 | 5.865777e-51 | -8.615850e-47 |
| Msa0319330 | Msa0895310 | 0.827677 | 1.370633e-54 | -8.615850e-47 |
| Msa0319330 | Msa0921870 | 0.808731 | 2.681688e-50 | -8.615850e-47 |
| Msa0319330 | Msa0943270 | 0.804843 | 1.777787e-49 | -8.615850e-47 |
| Msa0319330 | Msa0957870 | 0.801651 | 8.143987e-49 | -8.615850e-47 |
| Msa0319330 | Msa0957970 | 0.808411 | 3.137710e-50 | -8.615850e-47 |
| Msa0319330 | Msa0963020 | 0.816426 | 5.565469e-52 | -8.615850e-47 |
| Msa0319330 | Msa0970320 | 0.812717 | 3.682968e-51 | -8.615850e-47 |
| Msa0319330 | Msa0980940 | 0.822400 | 2.417184e-53 | -8.615850e-47 |
| Msa0319330 | Msa1001350 | 0.800422 | 1.451937e-48 | -8.615850e-47 |
| Msa0319330 | Msa1003440 | 0.803255 | 3.803246e-49 | -8.615850e-47 |
| Msa0319330 | Msa1010460 | 0.806466 | 8.116524e-50 | -8.615850e-47 |
| Msa0319330 | Msa1025940 | 0.821310 | 4.322033e-53 | -8.615850e-47 |
| Msa0319330 | Msa1036740 | 0.807469 | 4.977827e-50 | -8.615850e-47 |
| Msa0319330 | Msa1067070 | 0.817557 | 3.099963e-52 | -8.615850e-47 |
| Msa0319330 | Msa1113880 | 0.803110 | 4.075323e-49 | -8.615850e-47 |
| Msa0319330 | Msa1154490 | 0.808696 | 2.728048e-50 | -8.615850e-47 |
| Msa0319330 | Msa1171830 | 0.803275 | 3.767194e-49 | -8.615850e-47 |
| Msa0319330 | Msa1176360 | 0.802376 | 5.778321e-49 | -8.615850e-47 |
| Msa0319330 | Msa1176980 | 0.830506 | 2.826277e-55 | -8.615850e-47 |
| Msa0319330 | Msa1178050 | 0.812379 | 4.367315e-51 | -8.615850e-47 |
| Msa0319330 | Msa1188560 | 0.815589 | 8.555851e-52 | -8.615850e-47 |
| Msa0319330 | Msa1203880 | 0.810008 | 1.426693e-50 | -8.615850e-47 |
| Msa0319330 | Msa1205480 | 0.832767 | 7.834509e-56 | -8.615850e-47 |
| Msa0319330 | Msa1205850 | 0.819906 | 9.078397e-53 | -8.615850e-47 |
| Msa0319330 | Msa1253400 | 0.833069 | 6.591912e-56 | -8.615850e-47 |
| Msa0319330 | Msa1253810 | 0.844382 | 7.828541e-59 | -8.615850e-47 |
| Msa0319330 | Msa1279590 | 0.820110 | 8.154703e-53 | -8.615850e-47 |
| Msa0319330 | Msa1289300 | 0.808486 | 3.024987e-50 | -8.615850e-47 |
| Msa0319330 | Msa1296300 | 0.824509 | 7.766560e-54 | -8.615850e-47 |
| Msa0319330 | Msa1297600 | 0.833211 | 6.074969e-56 | -8.615850e-47 |
| Msa0319330 | Msa1299700 | 0.803134 | 4.029135e-49 | -8.615850e-47 |
| Msa0319330 | Msa1306390 | 0.808706 | 2.714216e-50 | -8.615850e-47 |
| Msa0319330 | Msa1329790 | 0.804493 | 2.103636e-49 | -8.615850e-47 |
| Msa0319330 | Msa1329800 | 0.806427 | 8.271870e-50 | -8.615850e-47 |
| Msa0319330 | Msa1340830 | 0.810996 | 8.731044e-51 | -8.615850e-47 |
| Msa0319330 | Msa1363700 | 0.809458 | 1.873538e-50 | -8.615850e-47 |
| Msa0319330 | Msa1369490 | 0.806542 | 7.819211e-50 | -8.615850e-47 |
| Msa0319330 | Msa1381650 | 0.806240 | 9.054965e-50 | -8.615850e-47 |
| Msa0319330 | Msa1396940 | 0.824035 | 1.003752e-53 | -8.615850e-47 |
| Msa0319330 | Msa1445940 | 0.851100 | 1.105908e-60 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0319330 | MtrunA17_Chr2g0293981 | 99.037 | 727 | 7 | 0 | 1 | 727 | 1 | 727 | 0.0 | 1502 |
| Msa0319330 | MtrunA17_Chr2g0312581 | 37.679 | 560 | 309 | 7 | 155 | 699 | 8 | 542 | 6.16e-117 | 363 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0319330 | AT5G49580.3 | 52.266 | 706 | 296 | 9 | 1 | 699 | 1 | 672 | 0.0 | 696 |
| Msa0319330 | AT5G49580.1 | 52.266 | 706 | 296 | 9 | 1 | 699 | 1 | 672 | 0.0 | 696 |
| Msa0319330 | AT5G49580.2 | 48.768 | 568 | 264 | 5 | 1 | 562 | 1 | 547 | 2.62e-175 | 513 |
| Msa0319330 | AT1G16680.1 | 36.292 | 507 | 278 | 10 | 211 | 699 | 62 | 541 | 4.13e-109 | 343 |
| Msa0319330 | AT1G79030.1 | 37.864 | 515 | 260 | 9 | 212 | 699 | 63 | 544 | 4.88e-107 | 337 |
| Msa0319330 | AT1G79030.2 | 39.278 | 443 | 207 | 9 | 285 | 699 | 1 | 409 | 7.71e-94 | 298 |
Find 200 sgRNAs with CRISPR-Local
Find 499 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGACCTCAAAACTCTATTT+TGG | 0.107174 | 2_4:-18875731 | None:intergenic |
| GATAGGGATGCTCAAGTTTC+TGG | 0.154719 | 2_4:+18870212 | Msa0319330:CDS |
| TTGACCGAAGCCAATTTATT+AGG | 0.180504 | 2_4:+18868624 | Msa0319330:five_prime_UTR |
| CCGTCTTCTTCCTCTGAAAA+TGG | 0.183213 | 2_4:+18872001 | Msa0319330:CDS |
| GCACTCAAATTCTTCCAATT+AGG | 0.184232 | 2_4:+18868807 | Msa0319330:five_prime_UTR |
| ACTTAAGAGATTAGGAAAAT+AGG | 0.191690 | 2_4:-18875762 | None:intergenic |
| AAATTAGGTGTTGGCATATT+AGG | 0.211580 | 2_4:-18875421 | None:intergenic |
| TTCATGCCATTTCCAGATTT+GGG | 0.215603 | 2_4:-18875550 | None:intergenic |
| CTTGACCGATACTGGCTTAT+TGG | 0.221473 | 2_4:-18868749 | None:intergenic |
| CACTCAAATTCTTCCAATTA+GGG | 0.231852 | 2_4:+18868808 | Msa0319330:five_prime_UTR |
| AAAATCTAACCCTAATAAAT+TGG | 0.233559 | 2_4:-18868634 | None:intergenic |
| TTTCATGCCATTTCCAGATT+TGG | 0.239617 | 2_4:-18875551 | None:intergenic |
| GTCATGGTTTCTTCAAAATT+AGG | 0.241893 | 2_4:-18875436 | None:intergenic |
| AGGTTTGCAGTTGAGAATTT+TGG | 0.251072 | 2_4:+18869852 | Msa0319330:CDS |
| ATGAACAGTCAACCAGGTTT+TGG | 0.271199 | 2_4:+18871962 | Msa0319330:CDS |
| ACTGCATTTATCATCATTCT+AGG | 0.275074 | 2_4:+18870972 | Msa0319330:CDS |
| TCCTTCTATTATCAGTGTTT+TGG | 0.280584 | 2_4:+18870091 | Msa0319330:CDS |
| CAGGGCCTGGCTGCCTTGAT+TGG | 0.280692 | 2_4:+18870864 | Msa0319330:intron |
| GTTCTATACTTCTAGTTCTA+AGG | 0.289268 | 2_4:-18868698 | None:intergenic |
| CTTAAGAGATTAGGAAAATA+GGG | 0.294123 | 2_4:-18875761 | None:intergenic |
| GAAGTATTGAAAACCCTAAT+TGG | 0.296367 | 2_4:-18868821 | None:intergenic |
| CATCCTTCTTCTCGGTTATA+TGG | 0.299273 | 2_4:+18870163 | Msa0319330:CDS |
| ACTGCAAACCTTCCACTAAA+TGG | 0.304208 | 2_4:-18869840 | None:intergenic |
| TGGGTGGCTTCGCTTGTTCT+TGG | 0.308169 | 2_4:+18871838 | Msa0319330:CDS |
| TGACGTGGCTCATGCACTTT+GGG | 0.318038 | 2_4:+18870061 | Msa0319330:CDS |
| TTGCCGATCATCCGGCTATT+AGG | 0.322602 | 2_4:+18869890 | Msa0319330:CDS |
| TGCCTTGTTGTGCACTTTGA+AGG | 0.331718 | 2_4:+18875664 | Msa0319330:three_prime_UTR |
| TGAGTTACGTAGCGCGATTA+TGG | 0.335829 | 2_4:-18868866 | None:intergenic |
| TTGAAGGCTTGAAAAGCATT+AGG | 0.342216 | 2_4:+18875680 | Msa0319330:three_prime_UTR |
| TGACCGAAGCCAATTTATTA+GGG | 0.344255 | 2_4:+18868625 | Msa0319330:five_prime_UTR |
| TTTAAAAGTTAAAAGATTCA+TGG | 0.353969 | 2_4:+18869456 | Msa0319330:exon |
| GGTGTGGCGGCTTTCATCTC+TGG | 0.366625 | 2_4:+18874425 | Msa0319330:CDS |
| ATTCCAGCTCTTTGTTCAAA+TGG | 0.367602 | 2_4:-18871941 | None:intergenic |
| TTCTCCGTGATTAGTATGAT+AGG | 0.367958 | 2_4:+18870195 | Msa0319330:CDS |
| GAGTAGATTGAGCCATTTAG+TGG | 0.374221 | 2_4:+18869828 | Msa0319330:CDS |
| AAATTCCGATGTCCTTGCTT+TGG | 0.377174 | 2_4:-18869772 | None:intergenic |
| TGGAGGAATCATCGTCCTTT+GGG | 0.378191 | 2_4:+18869713 | Msa0319330:CDS |
| ATGGAATTAATCACAGAAAA+GGG | 0.383520 | 2_4:+18869503 | Msa0319330:CDS |
| CTGGTGTTCACATGAAAACT+TGG | 0.384963 | 2_4:-18875325 | None:intergenic |
| CAGTTACAGAGTGGCTAATC+AGG | 0.386988 | 2_4:+18869947 | Msa0319330:CDS |
| TGAAGAGCTAGTTCCTTTGC+CGG | 0.388113 | 2_4:-18875368 | None:intergenic |
| CTGGAGGAATCATCGTCCTT+TGG | 0.393042 | 2_4:+18869712 | Msa0319330:CDS |
| GCTTTGGTAGTTGCTATCAT+TGG | 0.394199 | 2_4:+18870912 | Msa0319330:CDS |
| ATTCTCCTTGATTCACCAAA+TGG | 0.401847 | 2_4:-18874391 | None:intergenic |
| ATTGTGCTTGGCTGTATGTT+GGG | 0.402999 | 2_4:+18871819 | Msa0319330:CDS |
| TCTAGTTCTAAGGATCTGTT+TGG | 0.405672 | 2_4:-18868688 | None:intergenic |
| CGTGCAAAATATACAGCCTT+GGG | 0.406929 | 2_4:+18875825 | Msa0319330:three_prime_UTR |
| CAGATCATGTTTAAACATAC+TGG | 0.407446 | 2_4:+18875635 | Msa0319330:three_prime_UTR |
| TATTGTGCTTGGCTGTATGT+TGG | 0.412095 | 2_4:+18871818 | Msa0319330:CDS |
| GACGAATTCTTCCTCGGTCA+TGG | 0.419067 | 2_4:-18875452 | None:intergenic |
| ACCAAAACACTGATAATAGA+AGG | 0.419934 | 2_4:-18870092 | None:intergenic |
| CTTGGTTTATGTGTATTTGC+TGG | 0.421390 | 2_4:-18875307 | None:intergenic |
| GCTGATGATGAGTTTAGAAA+TGG | 0.422089 | 2_4:+18869395 | Msa0319330:five_prime_UTR |
| CTGACGTGGCTCATGCACTT+TGG | 0.424838 | 2_4:+18870060 | Msa0319330:CDS |
| AACTAGCTCTTCAACTCAAA+GGG | 0.429810 | 2_4:+18875378 | Msa0319330:CDS |
| GGGTACGACATCCTTCTTCT+CGG | 0.434787 | 2_4:+18870155 | Msa0319330:CDS |
| TTCAACTCAAAGGGGTGGGC+GGG | 0.437511 | 2_4:+18875387 | Msa0319330:CDS |
| AGTTTAGAAATGGATTAACT+TGG | 0.441978 | 2_4:+18869405 | Msa0319330:five_prime_UTR |
| ATCCGGCTATTAGGAGATTA+CGG | 0.443446 | 2_4:+18869899 | Msa0319330:CDS |
| AACCCATCCATCACCATCCT+TGG | 0.443760 | 2_4:-18874729 | None:intergenic |
| TTCAGAGCTTGCCGATCATC+CGG | 0.445535 | 2_4:+18869882 | Msa0319330:CDS |
| TGGGTTCGTGATTGCAGCTT+TGG | 0.446801 | 2_4:+18870896 | Msa0319330:CDS |
| AATGGAATTAATCACAGAAA+AGG | 0.451468 | 2_4:+18869502 | Msa0319330:CDS |
| TTTGGGAGTAATTCAGAGAA+TGG | 0.455595 | 2_4:+18869730 | Msa0319330:CDS |
| GCATGTGAGGGTTGTTCTGC+TGG | 0.458344 | 2_4:+18869631 | Msa0319330:CDS |
| CCACTACCAACGCCAGTGCC+AGG | 0.459167 | 2_4:-18875577 | None:intergenic |
| CCTGGCACTGGCGTTGGTAG+TGG | 0.460327 | 2_4:+18875577 | Msa0319330:CDS |
| CACTGAATGGTATATCTGTC+AGG | 0.460719 | 2_4:+18875004 | Msa0319330:CDS |
| GCTCAAGTTTCTGGTTGTCC+TGG | 0.462610 | 2_4:+18870221 | Msa0319330:CDS |
| TTTCAGAACAAAATTTAAGC+TGG | 0.465416 | 2_4:+18870023 | Msa0319330:CDS |
| TGTATTCTGTCTATTGTGCT+TGG | 0.467818 | 2_4:+18871807 | Msa0319330:CDS |
| CCGGCTGAGGAACTTGCAAA+TGG | 0.468641 | 2_4:+18869586 | Msa0319330:CDS |
| TAACCCTAATAAATTGGCTT+CGG | 0.474751 | 2_4:-18868628 | None:intergenic |
| AAGTTTCTTAAAGGCTTCTA+CGG | 0.478081 | 2_4:-18872511 | None:intergenic |
| AACAATATACTTAAGAGATT+AGG | 0.486749 | 2_4:-18875770 | None:intergenic |
| TTCTCCTTGATTCACCAAAT+GGG | 0.489971 | 2_4:-18874390 | None:intergenic |
| CAAGGAGAATAGCTTGCAAA+AGG | 0.491537 | 2_4:+18874404 | Msa0319330:CDS |
| ATGAGCCACGTCAGAACAAT+GGG | 0.492444 | 2_4:-18870051 | None:intergenic |
| TCATGCCATTTCCAGATTTG+GGG | 0.493483 | 2_4:-18875549 | None:intergenic |
| AAGGGTAATCAGCAGAAGAA+TGG | 0.493553 | 2_4:+18869484 | Msa0319330:CDS |
| GTTTCTTCAAAATTAGGTGT+TGG | 0.497006 | 2_4:-18875430 | None:intergenic |
| GTCTCGGGCAAGATGGTGCC+AGG | 0.505458 | 2_4:+18874468 | Msa0319330:CDS |
| GATTCATCGTTTCCAAAACC+TGG | 0.508927 | 2_4:-18871974 | None:intergenic |
| CCGTGCAAAATATACAGCCT+TGG | 0.508942 | 2_4:+18875824 | Msa0319330:three_prime_UTR |
| GAAACTTCAAAATGCATATG+AGG | 0.511920 | 2_4:+18872527 | Msa0319330:CDS |
| CTTCAACTCAAAGGGGTGGG+CGG | 0.513495 | 2_4:+18875386 | Msa0319330:CDS |
| TTACGATCTGCAGATGGTCC+TGG | 0.514165 | 2_4:-18872025 | None:intergenic |
| CATTGATTACCAGGCAATGT+TGG | 0.514780 | 2_4:+18872455 | Msa0319330:intron |
| TGGAATTAATCACAGAAAAG+GGG | 0.516115 | 2_4:+18869504 | Msa0319330:CDS |
| CCTCACCATCTGCATCTGAA+TGG | 0.520908 | 2_4:-18874366 | None:intergenic |
| TTTGATTCGTTTGTACGGAT+GGG | 0.520983 | 2_4:+18870135 | Msa0319330:CDS |
| TGGTTGGACTGTGCTGTTCG+AGG | 0.521093 | 2_4:+18870111 | Msa0319330:CDS |
| GTTGGCATATTAGGAGGAGT+TGG | 0.522851 | 2_4:-18875412 | None:intergenic |
| AGAAATGGATTAACTTGGAG+TGG | 0.523019 | 2_4:+18869410 | Msa0319330:five_prime_UTR |
| ATCCATCACCATCCTTGGCT+TGG | 0.524247 | 2_4:-18874724 | None:intergenic |
| AAAATCCAATCAAGGCAGCC+AGG | 0.524280 | 2_4:-18870869 | None:intergenic |
| AAATATTTGATGCCACTGAA+TGG | 0.526198 | 2_4:+18874991 | Msa0319330:CDS |
| AATCCATTTGAACAAAGAGC+TGG | 0.526676 | 2_4:+18871938 | Msa0319330:CDS |
| AGGACCCATTTGGTGAATCA+AGG | 0.533048 | 2_4:+18874386 | Msa0319330:CDS |
| TTTGATCACTATTCAGCACT+AGG | 0.534326 | 2_4:+18872124 | Msa0319330:CDS |
| CAGGAGTCCCCTCGACTAGT+GGG | 0.534391 | 2_4:+18872050 | Msa0319330:CDS |
| ATTAGCATAAGCTTCTAAAA+CGG | 0.535619 | 2_4:-18870001 | None:intergenic |
| GATTCGTGTTGGTGCCGCCT+CGG | 0.535881 | 2_4:-18875997 | None:intergenic |
| CATGCCATTTCCAGATTTGG+GGG | 0.536377 | 2_4:-18875548 | None:intergenic |
| CCTTCATGACCTTTCATACC+CGG | 0.537116 | 2_4:-18869544 | None:intergenic |
| TCTTCCTCTGAAAATGGACC+AGG | 0.538219 | 2_4:+18872007 | Msa0319330:CDS |
| GCACCATATAACCGAGAAGA+AGG | 0.539289 | 2_4:-18870166 | None:intergenic |
| AACCGTAATCTCCTAATAGC+CGG | 0.541875 | 2_4:-18869901 | None:intergenic |
| TCATTGGAGTTGTTATGTTG+TGG | 0.542642 | 2_4:+18870928 | Msa0319330:CDS |
| ATTTCTTGAGTAATCCATCA+AGG | 0.543128 | 2_4:+18869433 | Msa0319330:five_prime_UTR |
| CACCAAGAAACAAAAGTCTC+GGG | 0.544249 | 2_4:+18874453 | Msa0319330:CDS |
| CCATTTGCAAGTTCCTCAGC+CGG | 0.544575 | 2_4:-18869586 | None:intergenic |
| CCATCTGCAGATCGTAATGC+AGG | 0.545226 | 2_4:+18872031 | Msa0319330:CDS |
| AGCATAAGCTTCTAAAACGG+TGG | 0.545582 | 2_4:-18869998 | None:intergenic |
| AGATTGAGCCATTTAGTGGA+AGG | 0.545587 | 2_4:+18869832 | Msa0319330:CDS |
| GAAAGGTCATGAAGGAGGGC+AGG | 0.545748 | 2_4:+18869552 | Msa0319330:CDS |
| ACACCAAGAAACAAAAGTCT+CGG | 0.546633 | 2_4:+18874452 | Msa0319330:CDS |
| GGTGTACTTCCGGGTATGAA+AGG | 0.548743 | 2_4:+18869535 | Msa0319330:CDS |
| AAGCCAAGGATGGTGATGGA+TGG | 0.551051 | 2_4:+18874726 | Msa0319330:CDS |
| GCAGGAGTCCCCTCGACTAG+TGG | 0.551557 | 2_4:+18872049 | Msa0319330:CDS |
| GCAGATGGTGAGGACCCATT+TGG | 0.551725 | 2_4:+18874376 | Msa0319330:CDS |
| CACCAAGCCAAGGATGGTGA+TGG | 0.555083 | 2_4:+18874722 | Msa0319330:CDS |
| AAAAGATTCATGGCTCGAAA+GGG | 0.557489 | 2_4:+18869466 | Msa0319330:exon |
| TTAGGTGTTGGCATATTAGG+AGG | 0.557741 | 2_4:-18875418 | None:intergenic |
| TAAAAGATTCATGGCTCGAA+AGG | 0.558730 | 2_4:+18869465 | Msa0319330:exon |
| ATAGATATGTCTATTGAATG+TGG | 0.560877 | 2_4:-18875959 | None:intergenic |
| AACAAAAGTCTCGGGCAAGA+TGG | 0.562917 | 2_4:+18874461 | Msa0319330:CDS |
| TCTCCTAATAGCCGGATGAT+CGG | 0.564596 | 2_4:-18869893 | None:intergenic |
| TCTCCGTGATTAGTATGATA+GGG | 0.565170 | 2_4:+18870196 | Msa0319330:CDS |
| AGACGTTTCAGTACTGAAGC+GGG | 0.566654 | 2_4:+18872168 | Msa0319330:CDS |
| GTGCTTGGCTGTATGTTGGG+TGG | 0.567559 | 2_4:+18871822 | Msa0319330:CDS |
| TTACAGAATGCTGTACAGTC+AGG | 0.568648 | 2_4:+18875481 | Msa0319330:CDS |
| CATGAGCCACGTCAGAACAA+TGG | 0.568692 | 2_4:-18870052 | None:intergenic |
| AGCTCTTCAACTCAAAGGGG+TGG | 0.571602 | 2_4:+18875382 | Msa0319330:CDS |
| TCGAAACAAAATCCCGGCAA+AGG | 0.572489 | 2_4:+18875355 | Msa0319330:CDS |
| GAAGCGGGAATATAGAAAGA+AGG | 0.578955 | 2_4:+18872183 | Msa0319330:CDS |
| GAACTAGCTCTTCAACTCAA+AGG | 0.579558 | 2_4:+18875377 | Msa0319330:CDS |
| TCCTTCTGCTTACGTGTGTG+CGG | 0.580026 | 2_4:+18874962 | Msa0319330:CDS |
| CAAAGGACGATGATTCCTCC+AGG | 0.580096 | 2_4:-18869711 | None:intergenic |
| AAGCTTATGATGATGAGCTA+AGG | 0.581103 | 2_4:+18872656 | Msa0319330:CDS |
| GAAGAGCTAGTTCCTTTGCC+GGG | 0.582661 | 2_4:-18875367 | None:intergenic |
| CCACTCGACGAATTCTTCCT+CGG | 0.585540 | 2_4:-18875458 | None:intergenic |
| ATTTCAGAATGCTCCACGTA+GGG | 0.586068 | 2_4:+18872708 | Msa0319330:CDS |
| AGAATCAGCCCCACTAGTCG+AGG | 0.586405 | 2_4:-18872059 | None:intergenic |
| TCATGAAGGAGGGCAGGTGA+AGG | 0.587947 | 2_4:+18869558 | Msa0319330:CDS |
| ATGAAATATAATAGTAGCCG+AGG | 0.588242 | 2_4:+18875980 | Msa0319330:three_prime_UTR |
| GGCGCGTTTGACAATTTCAA+CGG | 0.588439 | 2_4:+18875502 | Msa0319330:CDS |
| ATTCTCTGAATTACTCCCAA+AGG | 0.590564 | 2_4:-18869728 | None:intergenic |
| GAACTTGCAAATGGTGGTCA+TGG | 0.592864 | 2_4:+18869595 | Msa0319330:CDS |
| CATCCCTATCATACTAATCA+CGG | 0.594543 | 2_4:-18870199 | None:intergenic |
| GAATCAGCCCCACTAGTCGA+GGG | 0.601717 | 2_4:-18872058 | None:intergenic |
| GCTCTTCAACTCAAAGGGGT+GGG | 0.603365 | 2_4:+18875383 | Msa0319330:CDS |
| TGAAGAGCATAGATTCGTGT+TGG | 0.604829 | 2_4:-18876008 | None:intergenic |
| CATATCCCATTGTTCTGACG+TGG | 0.605642 | 2_4:+18870046 | Msa0319330:CDS |
| TAAAAGATTGCATATTGACT+AGG | 0.607989 | 2_4:-18875874 | None:intergenic |
| TCCGCACACACGTAAGCAGA+AGG | 0.610397 | 2_4:-18874963 | None:intergenic |
| CCTGCATTACGATCTGCAGA+TGG | 0.611421 | 2_4:-18872031 | None:intergenic |
| AGCCAAGGATGGTGATGGAT+GGG | 0.611615 | 2_4:+18874727 | Msa0319330:CDS |
| TTTGGCCATTCAGATGCAGA+TGG | 0.612372 | 2_4:+18874361 | Msa0319330:CDS |
| TCGGAAAGATAAGCATGACC+TGG | 0.615542 | 2_4:+18869693 | Msa0319330:CDS |
| GGTATGAAAGGTCATGAAGG+AGG | 0.615998 | 2_4:+18869547 | Msa0319330:CDS |
| GCTGGAATGAACAGTCAACC+AGG | 0.618565 | 2_4:+18871956 | Msa0319330:CDS |
| CCATTCAGATGCAGATGGTG+AGG | 0.618824 | 2_4:+18874366 | Msa0319330:CDS |
| TTTAGCCAATAAGCCAGTAT+CGG | 0.619548 | 2_4:+18868744 | Msa0319330:five_prime_UTR |
| GCTGAGGAACTTGCAAATGG+TGG | 0.619742 | 2_4:+18869589 | Msa0319330:CDS |
| AATGTCGAAGTTCCAAAGCA+AGG | 0.621234 | 2_4:+18869760 | Msa0319330:CDS |
| ATAATGTCGAAACAAAATCC+CGG | 0.621520 | 2_4:+18875349 | Msa0319330:CDS |
| AAAACATCATGCATCGTGCA+TGG | 0.622047 | 2_4:+18875903 | Msa0319330:three_prime_UTR |
| AACATAAATCGTACCCTACG+TGG | 0.624458 | 2_4:-18872721 | None:intergenic |
| TAGACGTTTCAGTACTGAAG+CGG | 0.625744 | 2_4:+18872167 | Msa0319330:CDS |
| GCGTTTGACAATTTCAACGG+TGG | 0.627680 | 2_4:+18875505 | Msa0319330:CDS |
| TAATCGCGCTACGTAACTCA+AGG | 0.628264 | 2_4:+18868869 | Msa0319330:five_prime_UTR |
| GGAATTAATCACAGAAAAGG+GGG | 0.629119 | 2_4:+18869505 | Msa0319330:CDS |
| CCGGGTATGAAAGGTCATGA+AGG | 0.631946 | 2_4:+18869544 | Msa0319330:CDS |
| TGTTTCACAGAAAGCATGTG+AGG | 0.632672 | 2_4:+18869618 | Msa0319330:CDS |
| GTATGAAAGGTCATGAAGGA+GGG | 0.635714 | 2_4:+18869548 | Msa0319330:CDS |
| TATGTTACGTCATGAACGCG+TGG | 0.636057 | 2_4:+18871766 | Msa0319330:CDS |
| CCGAGGAAGAATTCGTCGAG+TGG | 0.636477 | 2_4:+18875458 | Msa0319330:CDS |
| GCATTTATCATCATTCTAGG+AGG | 0.640589 | 2_4:+18870975 | Msa0319330:CDS |
| AGGAGTCCCCTCGACTAGTG+GGG | 0.641976 | 2_4:+18872051 | Msa0319330:CDS |
| GATTAGCCACTCTGTAACTG+CGG | 0.645702 | 2_4:-18869944 | None:intergenic |
| CTAGGAAGATCATACGCACA+AGG | 0.655517 | 2_4:-18875856 | None:intergenic |
| AAGTTCCAAAGCAAGGACAT+CGG | 0.661315 | 2_4:+18869767 | Msa0319330:CDS |
| ATAGCTTGCAAAAGGTGTGG+CGG | 0.662061 | 2_4:+18874412 | Msa0319330:CDS |
| AGAATAGCTTGCAAAAGGTG+TGG | 0.663050 | 2_4:+18874409 | Msa0319330:CDS |
| AGCCTTCAAAGTGCACAACA+AGG | 0.664502 | 2_4:-18875666 | None:intergenic |
| CTGACAGATATACCATTCAG+TGG | 0.665769 | 2_4:-18875003 | None:intergenic |
| GAAAGATAAGCATGACCTGG+AGG | 0.670075 | 2_4:+18869696 | Msa0319330:CDS |
| AAATATAATAGTAGCCGAGG+CGG | 0.670786 | 2_4:+18875983 | Msa0319330:three_prime_UTR |
| GATTTCAGAATGCTCCACGT+AGG | 0.673345 | 2_4:+18872707 | Msa0319330:CDS |
| GTTTCACAGAAAGCATGTGA+GGG | 0.676354 | 2_4:+18869619 | Msa0319330:CDS |
| AATCAGCCCCACTAGTCGAG+GGG | 0.683712 | 2_4:-18872057 | None:intergenic |
| ACTAGCTCTTCAACTCAAAG+GGG | 0.695338 | 2_4:+18875379 | Msa0319330:CDS |
| TGCATGGATCATATCTAACG+AGG | 0.698730 | 2_4:+18875919 | Msa0319330:three_prime_UTR |
| GCACAAGGATCATTGCCCCA+AGG | 0.701804 | 2_4:-18875841 | None:intergenic |
| TATAGAACATGTGATGTGAG+TGG | 0.702837 | 2_4:+18868713 | Msa0319330:five_prime_UTR |
| ACAATGAGCGAAAGTCTGAG+AGG | 0.703722 | 2_4:+18869665 | Msa0319330:CDS |
| GTGCAAAATATACAGCCTTG+GGG | 0.728439 | 2_4:+18875826 | Msa0319330:three_prime_UTR |
| GTTCTAATAGATACAAACAA+CGG | 0.748087 | 2_4:-18869976 | None:intergenic |
| ACAATAGACAGAATACACAG+TGG | 0.816803 | 2_4:-18871801 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGAAAAATTTAATCAAAA+GGG | - | chr2_4:18868998-18869017 | None:intergenic | 10.0% |
| !! | TAATGAAAAATTTAATCAAA+AGG | - | chr2_4:18868999-18869018 | None:intergenic | 10.0% |
| !!! | TTATTTTTATCTTTTTTTAC+GGG | + | chr2_4:18871046-18871065 | Msa0319330:intron | 10.0% |
| !! | CAGAAAAAAAAAAAAAAAAA+AGG | - | chr2_4:18874506-18874525 | None:intergenic | 10.0% |
| !!! | TTGAATGTTTTAAAAATTAA+CGG | + | chr2_4:18875169-18875188 | Msa0319330:intron | 10.0% |
| !! | TTTAAAAGTTAAAAGATTCA+TGG | + | chr2_4:18869456-18869475 | Msa0319330:exon | 15.0% |
| !! | CCAAAAAAATAATCAAATAT+CGG | - | chr2_4:18871181-18871200 | None:intergenic | 15.0% |
| !!! | TATTTTTAAAACCTTTTTGA+GGG | - | chr2_4:18871482-18871501 | None:intergenic | 15.0% |
| !!! | ATATTTTTAAAACCTTTTTG+AGG | - | chr2_4:18871483-18871502 | None:intergenic | 15.0% |
| !!! | TCAAAAAGGTTTTAAAAATA+TGG | + | chr2_4:18871482-18871501 | Msa0319330:intron | 15.0% |
| !! | TATTACAATTTCATTATTCA+TGG | - | chr2_4:18872961-18872980 | None:intergenic | 15.0% |
| !! | TTTATGTTTAGGAATAAATA+GGG | - | chr2_4:18873349-18873368 | None:intergenic | 15.0% |
| !! | TAACAAATAATTAAAACAAC+TGG | - | chr2_4:18873744-18873763 | None:intergenic | 15.0% |
| !!! | AGTTGTTTTAATTATTTGTT+AGG | + | chr2_4:18873743-18873762 | Msa0319330:intron | 15.0% |
| !!! | AATAATTTTGTTATATCATC+AGG | + | chr2_4:18874932-18874951 | Msa0319330:intron | 15.0% |
| !!! | ATTTTTAAAACATTCAATGT+TGG | - | chr2_4:18875166-18875185 | None:intergenic | 15.0% |
| !! | TGATGAAAAAACAAAATTAT+TGG | - | chr2_4:18875798-18875817 | None:intergenic | 15.0% |
| !! | AAAATCTAACCCTAATAAAT+TGG | - | chr2_4:18868637-18868656 | None:intergenic | 20.0% |
| !!! | AATTTTATCACTAATCACTT+TGG | + | chr2_4:18868939-18868958 | Msa0319330:intron | 20.0% |
| !!! | ATTTTATCACTAATCACTTT+GGG | + | chr2_4:18868940-18868959 | Msa0319330:intron | 20.0% |
| !!! | TATGTTAATTCCATGATTTT+AGG | + | chr2_4:18869051-18869070 | Msa0319330:intron | 20.0% |
| !!! | ATGTTAATTCCATGATTTTA+GGG | + | chr2_4:18869052-18869071 | Msa0319330:intron | 20.0% |
| !!! | GCTATGAATATTTTTTTTAG+CGG | + | chr2_4:18869112-18869131 | Msa0319330:intron | 20.0% |
| !!! | TTAGTGTTTTTTTACTCAAA+TGG | + | chr2_4:18869186-18869205 | Msa0319330:intron | 20.0% |
| !!! | TAGTGTTTTTTTACTCAAAT+GGG | + | chr2_4:18869187-18869206 | Msa0319330:intron | 20.0% |
| !! | GAATATGAATATGATGATTA+AGG | + | chr2_4:18869333-18869352 | Msa0319330:intron | 20.0% |
| !!! | TGATTAAGGAATTTAGTTTT+TGG | + | chr2_4:18869347-18869366 | Msa0319330:intron | 20.0% |
| !!! | TTTTAACTTTTAAACCTTGA+TGG | - | chr2_4:18869450-18869469 | None:intergenic | 20.0% |
| !!! | TCCAATTATCAAAATTTTCT+CGG | - | chr2_4:18870299-18870318 | None:intergenic | 20.0% |
| !!! | TTTAAAATGAATTTTCCCAA+CGG | - | chr2_4:18870450-18870469 | None:intergenic | 20.0% |
| !! | ATTATAGAACAATAAAGAAC+AGG | - | chr2_4:18870517-18870536 | None:intergenic | 20.0% |
| !! | GAAGCAATAATTAACATAAA+TGG | - | chr2_4:18870541-18870560 | None:intergenic | 20.0% |
| !! | TTACAAAAATACGTTATCAT+AGG | - | chr2_4:18870839-18870858 | None:intergenic | 20.0% |
| !!! | CCGATATTTGATTATTTTTT+TGG | + | chr2_4:18871178-18871197 | Msa0319330:intron | 20.0% |
| !! | TGAATTTCAAATTAAGTCAA+AGG | - | chr2_4:18871735-18871754 | None:intergenic | 20.0% |
| !!! | TTTGACTTAATTTGAAATTC+AGG | + | chr2_4:18871734-18871753 | Msa0319330:intron | 20.0% |
| !!! | ATAGTTGTATATTTTTTTGC+TGG | + | chr2_4:18872340-18872359 | Msa0319330:intron | 20.0% |
| !! | TGTAATAAATAACGTCTTAA+TGG | + | chr2_4:18872974-18872993 | Msa0319330:intron | 20.0% |
| !! | GCAGATATATAAGATATTTA+CGG | + | chr2_4:18873005-18873024 | Msa0319330:intron | 20.0% |
| !! | ACAATTCATATTCAAGAAAT+TGG | + | chr2_4:18873221-18873240 | Msa0319330:intron | 20.0% |
| !! | GTTTATGTTTAGGAATAAAT+AGG | - | chr2_4:18873350-18873369 | None:intergenic | 20.0% |
| !!! | TTTTAATTATTTGTTAGGCA+AGG | + | chr2_4:18873748-18873767 | Msa0319330:intron | 20.0% |
| !!! | ATATTTGAGACTTGAAAAAA+TGG | - | chr2_4:18873942-18873961 | None:intergenic | 20.0% |
| !!! | TTTTTAGTGTTTTCAAATAG+CGG | + | chr2_4:18874068-18874087 | Msa0319330:intron | 20.0% |
| !!! | TTTTAAGTTATTTCTCTCTA+AGG | - | chr2_4:18874626-18874645 | None:intergenic | 20.0% |
| !!! | ACTCTGTTTTTTCATTTTAA+AGG | + | chr2_4:18874685-18874704 | Msa0319330:intron | 20.0% |
| !!! | ACAAGATGAATTTTTTGAAA+TGG | - | chr2_4:18874812-18874831 | None:intergenic | 20.0% |
| !! | TTTCAAAAAATTCATCTTGT+TGG | + | chr2_4:18874812-18874831 | Msa0319330:intron | 20.0% |
| !! | AACAATATACTTAAGAGATT+AGG | - | chr2_4:18875773-18875792 | None:intergenic | 20.0% |
| !!! | TAGTGTTTTTTTTGCTCAAA+TGG | + | chr2_4:18869246-18869265 | Msa0319330:intron | 25.0% |
| !!! | AGTGTTTTTTTTGCTCAAAT+GGG | + | chr2_4:18869247-18869266 | Msa0319330:intron | 25.0% |
| !!! | TTTGGTTTTCTTGTATTGAT+AGG | + | chr2_4:18869365-18869384 | Msa0319330:intron | 25.0% |
| !!! | AGTTTAGAAATGGATTAACT+TGG | + | chr2_4:18869405-18869424 | Msa0319330:five_prime_UTR | 25.0% |
| ! | AATGGAATTAATCACAGAAA+AGG | + | chr2_4:18869502-18869521 | Msa0319330:CDS | 25.0% |
| ! | ATGGAATTAATCACAGAAAA+GGG | + | chr2_4:18869503-18869522 | Msa0319330:CDS | 25.0% |
| ! | GTTCTAATAGATACAAACAA+CGG | - | chr2_4:18869979-18869998 | None:intergenic | 25.0% |
| !! | ATTAGCATAAGCTTCTAAAA+CGG | - | chr2_4:18870004-18870023 | None:intergenic | 25.0% |
| ! | TTTCAGAACAAAATTTAAGC+TGG | + | chr2_4:18870023-18870042 | Msa0319330:CDS | 25.0% |
| ! | AACTTCATTTAATTACCGTT+GGG | + | chr2_4:18870432-18870451 | Msa0319330:intron | 25.0% |
| !! | GATTCTTGCAATAATGTTTT+AGG | + | chr2_4:18870611-18870630 | Msa0319330:intron | 25.0% |
| !!! | ACGTATTTTTGTAATTGATC+AGG | + | chr2_4:18870845-18870864 | Msa0319330:intron | 25.0% |
| !!! | CGTATTTTTGTAATTGATCA+GGG | + | chr2_4:18870846-18870865 | Msa0319330:intron | 25.0% |
| !!! | CTCTGTTTTCTTTTGTTTTA+TGG | - | chr2_4:18871318-18871337 | None:intergenic | 25.0% |
| ! | CATAAAACAAAAGAAAACAG+AGG | + | chr2_4:18871316-18871335 | Msa0319330:intron | 25.0% |
| !!! | AGAAAGTGTTGAAAAATGTT+AGG | + | chr2_4:18871435-18871454 | Msa0319330:intron | 25.0% |
| ! | TTCCTACTAAAATCAAATAG+TGG | + | chr2_4:18871517-18871536 | Msa0319330:intron | 25.0% |
| ! | TTCAAATTAAGTCAAAGGAT+AGG | - | chr2_4:18871730-18871749 | None:intergenic | 25.0% |
| !! | CTTAATTTGAAATTCAGGAT+TGG | + | chr2_4:18871739-18871758 | Msa0319330:intron | 25.0% |
| !!! | TTGTATATTTTTTTGCTGGT+TGG | + | chr2_4:18872344-18872363 | Msa0319330:intron | 25.0% |
| ! | AGTAATGAGAAGAATCATTA+CGG | - | chr2_4:18872422-18872441 | None:intergenic | 25.0% |
| ! | GTACATCCTGATAAAAATAT+GGG | + | chr2_4:18872477-18872496 | Msa0319330:CDS | 25.0% |
| !!! | TGCATTTTGAAGTTTCTTAA+AGG | - | chr2_4:18872523-18872542 | None:intergenic | 25.0% |
| ! | ATAGTTATTGAGTGGTTATA+GGG | - | chr2_4:18873300-18873319 | None:intergenic | 25.0% |
| !! | CAGTTATGTTGTTTATGTTT+AGG | - | chr2_4:18873360-18873379 | None:intergenic | 25.0% |
| ! | GATAAAGAATAATATGTGCA+TGG | - | chr2_4:18873437-18873456 | None:intergenic | 25.0% |
| !! | TATATTTGGAAGTTGTGTTT+TGG | + | chr2_4:18873503-18873522 | Msa0319330:intron | 25.0% |
| ! | TATCAATCATATCATTCTGT+TGG | + | chr2_4:18873628-18873647 | Msa0319330:intron | 25.0% |
| ! | AGATTAATGATCAAACGAAA+AGG | + | chr2_4:18873715-18873734 | Msa0319330:intron | 25.0% |
| ! | CACTAAAAAAAATAGCTACA+AGG | - | chr2_4:18874057-18874076 | None:intergenic | 25.0% |
| ! | TGAATTAAGCCAAAAAGAAA+TGG | - | chr2_4:18874770-18874789 | None:intergenic | 25.0% |
| ! | AAGTTAAACTGCAGATTATA+AGG | - | chr2_4:18874844-18874863 | None:intergenic | 25.0% |
| !!! | GTAAATGTTTTGATATATGC+TGG | + | chr2_4:18875113-18875132 | Msa0319330:intron | 25.0% |
| !! | TTAAAAATTAACGGATCCAT+AGG | + | chr2_4:18875178-18875197 | Msa0319330:intron | 25.0% |
| !! | ACATTAGTATATTTTCTTGC+AGG | + | chr2_4:18875273-18875292 | Msa0319330:intron | 25.0% |
| !! | CATTAGTATATTTTCTTGCA+GGG | + | chr2_4:18875274-18875293 | Msa0319330:intron | 25.0% |
| !!! | ATTTTGTTTCGACATTATAC+TGG | - | chr2_4:18875347-18875366 | None:intergenic | 25.0% |
| ! | CTTAAGAGATTAGGAAAATA+GGG | - | chr2_4:18875764-18875783 | None:intergenic | 25.0% |
| ! | ACTTAAGAGATTAGGAAAAT+AGG | - | chr2_4:18875765-18875784 | None:intergenic | 25.0% |
| !! | TAAAAGATTGCATATTGACT+AGG | - | chr2_4:18875877-18875896 | None:intergenic | 25.0% |
| ! | ATAGATATGTCTATTGAATG+TGG | - | chr2_4:18875962-18875981 | None:intergenic | 25.0% |
| ! | TAACCCTAATAAATTGGCTT+CGG | - | chr2_4:18868631-18868650 | None:intergenic | 30.0% |
| !! | GTTCTATACTTCTAGTTCTA+AGG | - | chr2_4:18868701-18868720 | None:intergenic | 30.0% |
| CACTCAAATTCTTCCAATTA+GGG | + | chr2_4:18868808-18868827 | Msa0319330:five_prime_UTR | 30.0% | |
| !! | GAAGTATTGAAAACCCTAAT+TGG | - | chr2_4:18868824-18868843 | None:intergenic | 30.0% |
| AGCAATAAACCCTAAAATCA+TGG | - | chr2_4:18869064-18869083 | None:intergenic | 30.0% | |
| ! | TTTAGGGTTTATTGCTCAAA+TGG | + | chr2_4:18869068-18869087 | Msa0319330:intron | 30.0% |
| TTAGGGTTTATTGCTCAAAT+GGG | + | chr2_4:18869069-18869088 | Msa0319330:intron | 30.0% | |
| ! | TTTAGTGTTTTACGCTGAAA+TGG | + | chr2_4:18869304-18869323 | Msa0319330:intron | 30.0% |
| ! | TTAGTGTTTTACGCTGAAAT+GGG | + | chr2_4:18869305-18869324 | Msa0319330:intron | 30.0% |
| ATTTCTTGAGTAATCCATCA+AGG | + | chr2_4:18869433-18869452 | Msa0319330:five_prime_UTR | 30.0% | |
| TGGAATTAATCACAGAAAAG+GGG | + | chr2_4:18869504-18869523 | Msa0319330:CDS | 30.0% | |
| ! | TCCTTCTATTATCAGTGTTT+TGG | + | chr2_4:18870091-18870110 | Msa0319330:CDS | 30.0% |
| ACCAAAACACTGATAATAGA+AGG | - | chr2_4:18870095-18870114 | None:intergenic | 30.0% | |
| !!! | TCTATTATCAGTGTTTTGGT+TGG | + | chr2_4:18870095-18870114 | Msa0319330:CDS | 30.0% |
| AGCAATAACAATTGTTACCA+GGG | - | chr2_4:18870251-18870270 | None:intergenic | 30.0% | |
| AAGCAATAACAATTGTTACC+AGG | - | chr2_4:18870252-18870271 | None:intergenic | 30.0% | |
| !! | GCCGAGAAAATTTTGATAAT+TGG | + | chr2_4:18870295-18870314 | Msa0319330:intron | 30.0% |
| ! | AAGTTTTGCACTCACATAAA+GGG | - | chr2_4:18870381-18870400 | None:intergenic | 30.0% |
| CAACTTCATTTAATTACCGT+TGG | + | chr2_4:18870431-18870450 | Msa0319330:intron | 30.0% | |
| CAATAAAGAACAGGTCAATA+GGG | - | chr2_4:18870508-18870527 | None:intergenic | 30.0% | |
| ACAATAAAGAACAGGTCAAT+AGG | - | chr2_4:18870509-18870528 | None:intergenic | 30.0% | |
| ! | TCAAAAAATAAGAAGCGTGT+TGG | - | chr2_4:18870747-18870766 | None:intergenic | 30.0% |
| !!! | CCTTGATTGGATTTTTTGTT+GGG | + | chr2_4:18870877-18870896 | Msa0319330:CDS | 30.0% |
| !! | GTTGTTATGTTGTGGTTTTA+TGG | + | chr2_4:18870936-18870955 | Msa0319330:CDS | 30.0% |
| ACTGCATTTATCATCATTCT+AGG | + | chr2_4:18870972-18870991 | Msa0319330:CDS | 30.0% | |
| !!! | TATCTTTTTTTACGGGAAGT+TGG | + | chr2_4:18871053-18871072 | Msa0319330:intron | 30.0% |
| !!! | ATCTTTTTTTACGGGAAGTT+GGG | + | chr2_4:18871054-18871073 | Msa0319330:intron | 30.0% |
| !!! | ATCCTCTGTCTTTTGTTTTT+TGG | - | chr2_4:18871266-18871285 | None:intergenic | 30.0% |
| !! | AGCCACTATTTGATTTTAGT+AGG | - | chr2_4:18871522-18871541 | None:intergenic | 30.0% |
| ! | GTTGATCTATGTTTTTCTTG+AGG | - | chr2_4:18871907-18871926 | None:intergenic | 30.0% |
| GAGACACAAAAAGTAAAACA+TGG | - | chr2_4:18872237-18872256 | None:intergenic | 30.0% | |
| ! | GTAAACTTTTCAGAGAGTTA+TGG | + | chr2_4:18872312-18872331 | Msa0319330:intron | 30.0% |
| GGTACATCCTGATAAAAATA+TGG | + | chr2_4:18872476-18872495 | Msa0319330:CDS | 30.0% | |
| TAAAAATATGGGCAACGAAA+AGG | + | chr2_4:18872488-18872507 | Msa0319330:CDS | 30.0% | |
| AAGTTTCTTAAAGGCTTCTA+CGG | - | chr2_4:18872514-18872533 | None:intergenic | 30.0% | |
| GAAACTTCAAAATGCATATG+AGG | + | chr2_4:18872527-18872546 | Msa0319330:CDS | 30.0% | |
| ! | ATCATAAGCTTTTCTCTTCA+AGG | - | chr2_4:18872647-18872666 | None:intergenic | 30.0% |
| TTATAACCTTTGATGCATTC+TGG | + | chr2_4:18872798-18872817 | Msa0319330:intron | 30.0% | |
| CACATATCTATCACATTCAT+AGG | + | chr2_4:18872893-18872912 | Msa0319330:intron | 30.0% | |
| AAATAACGTCTTAATGGTGA+AGG | + | chr2_4:18872980-18872999 | Msa0319330:intron | 30.0% | |
| TAGTTATTGAGTGGTTATAG+GGG | - | chr2_4:18873299-18873318 | None:intergenic | 30.0% | |
| GATAGTTATTGAGTGGTTAT+AGG | - | chr2_4:18873301-18873320 | None:intergenic | 30.0% | |
| ATTATGGGATAGTTATTGAG+TGG | - | chr2_4:18873308-18873327 | None:intergenic | 30.0% | |
| GTTTAGGAATAAATAGGGAA+AGG | - | chr2_4:18873344-18873363 | None:intergenic | 30.0% | |
| TTATTAGAGAACAACGTAAG+AGG | - | chr2_4:18873403-18873422 | None:intergenic | 30.0% | |
| TCTTCTTCTTAGGCTATATT+TGG | + | chr2_4:18873489-18873508 | Msa0319330:intron | 30.0% | |
| ACACACTTACTTACATATAC+TGG | - | chr2_4:18873684-18873703 | None:intergenic | 30.0% | |
| ! | TGGTTATTGATGGATAATGA+TGG | - | chr2_4:18873885-18873904 | None:intergenic | 30.0% |
| ACAGAATACTTGGTTATTGA+TGG | - | chr2_4:18873895-18873914 | None:intergenic | 30.0% | |
| TGGAAGAATGTGTTAGTATA+TGG | - | chr2_4:18873922-18873941 | None:intergenic | 30.0% | |
| TAAGCCAAAAAGAAATGGTT+GGG | - | chr2_4:18874765-18874784 | None:intergenic | 30.0% | |
| TTAAGCCAAAAAGAAATGGT+TGG | - | chr2_4:18874766-18874785 | None:intergenic | 30.0% | |
| !!! | TCTTTTTGGCTTAATTCAGA+AGG | + | chr2_4:18874772-18874791 | Msa0319330:CDS | 30.0% |
| TTTATATTTGAGCCAATTCC+TGG | + | chr2_4:18874868-18874887 | Msa0319330:intron | 30.0% | |
| AAATATTTGATGCCACTGAA+TGG | + | chr2_4:18874991-18875010 | Msa0319330:CDS | 30.0% | |
| ATGTCAAAACACAAATGTCA+TGG | - | chr2_4:18875081-18875100 | None:intergenic | 30.0% | |
| ATAATGTCGAAACAAAATCC+CGG | + | chr2_4:18875349-18875368 | Msa0319330:CDS | 30.0% | |
| !! | AAATTAGGTGTTGGCATATT+AGG | - | chr2_4:18875424-18875443 | None:intergenic | 30.0% |
| GTTTCTTCAAAATTAGGTGT+TGG | - | chr2_4:18875433-18875452 | None:intergenic | 30.0% | |
| GTCATGGTTTCTTCAAAATT+AGG | - | chr2_4:18875439-18875458 | None:intergenic | 30.0% | |
| CAGATCATGTTTAAACATAC+TGG | + | chr2_4:18875635-18875654 | Msa0319330:three_prime_UTR | 30.0% | |
| ! | TGACCTCAAAACTCTATTTT+GGG | - | chr2_4:18875733-18875752 | None:intergenic | 30.0% |
| ! | ATGACCTCAAAACTCTATTT+TGG | - | chr2_4:18875734-18875753 | None:intergenic | 30.0% |
| ATGAAATATAATAGTAGCCG+AGG | + | chr2_4:18875980-18875999 | Msa0319330:three_prime_UTR | 30.0% | |
| TTGACCGAAGCCAATTTATT+AGG | + | chr2_4:18868624-18868643 | Msa0319330:five_prime_UTR | 35.0% | |
| TGACCGAAGCCAATTTATTA+GGG | + | chr2_4:18868625-18868644 | Msa0319330:five_prime_UTR | 35.0% | |
| !! | TCTAGTTCTAAGGATCTGTT+TGG | - | chr2_4:18868691-18868710 | None:intergenic | 35.0% |
| TATAGAACATGTGATGTGAG+TGG | + | chr2_4:18868713-18868732 | Msa0319330:five_prime_UTR | 35.0% | |
| TTTAGCCAATAAGCCAGTAT+CGG | + | chr2_4:18868744-18868763 | Msa0319330:five_prime_UTR | 35.0% | |
| !!! | TCTTTTTTCTTGACCGATAC+TGG | - | chr2_4:18868760-18868779 | None:intergenic | 35.0% |
| GCACTCAAATTCTTCCAATT+AGG | + | chr2_4:18868807-18868826 | Msa0319330:five_prime_UTR | 35.0% | |
| TTTAGCGGTTTATGCTCAAA+TGG | + | chr2_4:18869127-18869146 | Msa0319330:intron | 35.0% | |
| TTAGCGGTTTATGCTCAAAT+GGG | + | chr2_4:18869128-18869147 | Msa0319330:intron | 35.0% | |
| ! | GCTGATGATGAGTTTAGAAA+TGG | + | chr2_4:18869395-18869414 | Msa0319330:five_prime_UTR | 35.0% |
| !! | AGAAATGGATTAACTTGGAG+TGG | + | chr2_4:18869410-18869429 | Msa0319330:five_prime_UTR | 35.0% |
| TAAAAGATTCATGGCTCGAA+AGG | + | chr2_4:18869465-18869484 | Msa0319330:exon | 35.0% | |
| AAAAGATTCATGGCTCGAAA+GGG | + | chr2_4:18869466-18869485 | Msa0319330:exon | 35.0% | |
| GGAATTAATCACAGAAAAGG+GGG | + | chr2_4:18869505-18869524 | Msa0319330:CDS | 35.0% | |
| ATTCTCTGAATTACTCCCAA+AGG | - | chr2_4:18869731-18869750 | None:intergenic | 35.0% | |
| TTTGGGAGTAATTCAGAGAA+TGG | + | chr2_4:18869730-18869749 | Msa0319330:CDS | 35.0% | |
| ! | AGGTTTGCAGTTGAGAATTT+TGG | + | chr2_4:18869852-18869871 | Msa0319330:CDS | 35.0% |
| !!! | GAGGTTTTGATTCGTTTGTA+CGG | + | chr2_4:18870130-18870149 | Msa0319330:CDS | 35.0% |
| !! | TTTTGATTCGTTTGTACGGA+TGG | + | chr2_4:18870134-18870153 | Msa0319330:CDS | 35.0% |
| ! | TTTGATTCGTTTGTACGGAT+GGG | + | chr2_4:18870135-18870154 | Msa0319330:CDS | 35.0% |
| TTCTCCGTGATTAGTATGAT+AGG | + | chr2_4:18870195-18870214 | Msa0319330:CDS | 35.0% | |
| TCTCCGTGATTAGTATGATA+GGG | + | chr2_4:18870196-18870215 | Msa0319330:CDS | 35.0% | |
| CATCCCTATCATACTAATCA+CGG | - | chr2_4:18870202-18870221 | None:intergenic | 35.0% | |
| ! | CAAGTTTTGCACTCACATAA+AGG | - | chr2_4:18870382-18870401 | None:intergenic | 35.0% |
| GAATCAGAACAAGTTTGACA+GGG | - | chr2_4:18870596-18870615 | None:intergenic | 35.0% | |
| AGAATCAGAACAAGTTTGAC+AGG | - | chr2_4:18870597-18870616 | None:intergenic | 35.0% | |
| !! | GCAATCATGCTTGCTATTTA+TGG | - | chr2_4:18870705-18870724 | None:intergenic | 35.0% |
| !!! | GCCTTGATTGGATTTTTTGT+TGG | + | chr2_4:18870876-18870895 | Msa0319330:CDS | 35.0% |
| CCCAACAAAAAATCCAATCA+AGG | - | chr2_4:18870880-18870899 | None:intergenic | 35.0% | |
| TCATTGGAGTTGTTATGTTG+TGG | + | chr2_4:18870928-18870947 | Msa0319330:CDS | 35.0% | |
| !!! | TGTGGTTTTATGGTAGCTTT+TGG | + | chr2_4:18870946-18870965 | Msa0319330:CDS | 35.0% |
| GCATTTATCATCATTCTAGG+AGG | + | chr2_4:18870975-18870994 | Msa0319330:CDS | 35.0% | |
| TATAGCGGTATGACAAATAG+CGG | + | chr2_4:18871152-18871171 | Msa0319330:intron | 35.0% | |
| CACCAAAAAACAAAAGACAG+AGG | + | chr2_4:18871261-18871280 | Msa0319330:intron | 35.0% | |
| !!! | AACCTTTTTGAGGGCATTTT+GGG | - | chr2_4:18871473-18871492 | None:intergenic | 35.0% |
| !!! | AAACCTTTTTGAGGGCATTT+TGG | - | chr2_4:18871474-18871493 | None:intergenic | 35.0% |
| AAATCAAATAGTGGCTGAAG+CGG | + | chr2_4:18871526-18871545 | Msa0319330:intron | 35.0% | |
| AGTCAAAGGATAGGTAAGTT+TGG | - | chr2_4:18871721-18871740 | None:intergenic | 35.0% | |
| ACAATAGACAGAATACACAG+TGG | - | chr2_4:18871804-18871823 | None:intergenic | 35.0% | |
| TGTATTCTGTCTATTGTGCT+TGG | + | chr2_4:18871807-18871826 | Msa0319330:CDS | 35.0% | |
| AATCCATTTGAACAAAGAGC+TGG | + | chr2_4:18871938-18871957 | Msa0319330:CDS | 35.0% | |
| ATTCCAGCTCTTTGTTCAAA+TGG | - | chr2_4:18871944-18871963 | None:intergenic | 35.0% | |
| TTTGATCACTATTCAGCACT+AGG | + | chr2_4:18872124-18872143 | Msa0319330:CDS | 35.0% | |
| TCTAGATATTGTGCTCTTCA+GGG | + | chr2_4:18872255-18872274 | Msa0319330:intron | 35.0% | |
| !! | TCGTTGCCCATATTTTTATC+AGG | - | chr2_4:18872486-18872505 | None:intergenic | 35.0% |
| CACAATAACCATACAAGTCA+GGG | - | chr2_4:18872602-18872621 | None:intergenic | 35.0% | |
| TCACAATAACCATACAAGTC+AGG | - | chr2_4:18872603-18872622 | None:intergenic | 35.0% | |
| ! | AAGCTTATGATGATGAGCTA+AGG | + | chr2_4:18872656-18872675 | Msa0319330:CDS | 35.0% |
| ATGATACTAAAACAGCAGGA+AGG | - | chr2_4:18872748-18872767 | None:intergenic | 35.0% | |
| !!! | TTCCTGCTGTTTTAGTATCA+TGG | + | chr2_4:18872747-18872766 | Msa0319330:intron | 35.0% |
| TTCCATGATACTAAAACAGC+AGG | - | chr2_4:18872752-18872771 | None:intergenic | 35.0% | |
| ! | TAGGAATTTGAGATTGCAAG+TGG | + | chr2_4:18872912-18872931 | Msa0319330:intron | 35.0% |
| GGAAAGGAGAAAGTGATTAT+GGG | - | chr2_4:18873323-18873342 | None:intergenic | 35.0% | |
| AGGAAAGGAGAAAGTGATTA+TGG | - | chr2_4:18873324-18873343 | None:intergenic | 35.0% | |
| GGAATAAATAGGGAAAGGAA+AGG | - | chr2_4:18873339-18873358 | None:intergenic | 35.0% | |
| CTGTTCTTCTTCTTCTTCTT+AGG | + | chr2_4:18873479-18873498 | Msa0319330:intron | 35.0% | |
| !! | ATTTGGAAGTTGTGTTTTGG+AGG | + | chr2_4:18873506-18873525 | Msa0319330:intron | 35.0% |
| !! | TTTGGAAGTTGTGTTTTGGA+GGG | + | chr2_4:18873507-18873526 | Msa0319330:intron | 35.0% |
| ATATGGACAGACAGAATACT+TGG | - | chr2_4:18873905-18873924 | None:intergenic | 35.0% | |
| ! | AGAATCTCTAAGGGTATGTT+TGG | - | chr2_4:18874000-18874019 | None:intergenic | 35.0% |
| GATAGCACAAGAATCTCTAA+GGG | - | chr2_4:18874009-18874028 | None:intergenic | 35.0% | |
| AGATAGCACAAGAATCTCTA+AGG | - | chr2_4:18874010-18874029 | None:intergenic | 35.0% | |
| TAGCTACAAGGTTCTCTAAA+TGG | - | chr2_4:18874045-18874064 | None:intergenic | 35.0% | |
| CTATTGTCTAACTTAAGCTG+TGG | + | chr2_4:18874290-18874309 | Msa0319330:intron | 35.0% | |
| ! | AACTGTTTTGCCAGAATAGT+AGG | + | chr2_4:18874317-18874336 | Msa0319330:intron | 35.0% |
| ! | TAGGCATGGATTCTTTTCTT+CGG | + | chr2_4:18874336-18874355 | Msa0319330:CDS | 35.0% |
| TTCTCCTTGATTCACCAAAT+GGG | - | chr2_4:18874393-18874412 | None:intergenic | 35.0% | |
| ATTCTCCTTGATTCACCAAA+TGG | - | chr2_4:18874394-18874413 | None:intergenic | 35.0% | |
| ACACCAAGAAACAAAAGTCT+CGG | + | chr2_4:18874452-18874471 | Msa0319330:CDS | 35.0% | |
| ! | TCTTCCCAACCATTTCTTTT+TGG | + | chr2_4:18874758-18874777 | Msa0319330:CDS | 35.0% |
| ATTACGTGTGAACAAACCTA+TGG | - | chr2_4:18875197-18875216 | None:intergenic | 35.0% | |
| ! | GATCTTTTAATCTCCAGAGA+AGG | - | chr2_4:18875242-18875261 | None:intergenic | 35.0% |
| CTTGGTTTATGTGTATTTGC+TGG | - | chr2_4:18875310-18875329 | None:intergenic | 35.0% | |
| ! | AACTAGCTCTTCAACTCAAA+GGG | + | chr2_4:18875378-18875397 | Msa0319330:CDS | 35.0% |
| ! | TTCATGCCATTTCCAGATTT+GGG | - | chr2_4:18875553-18875572 | None:intergenic | 35.0% |
| ! | TTTCATGCCATTTCCAGATT+TGG | - | chr2_4:18875554-18875573 | None:intergenic | 35.0% |
| GGCAGCAAAAGAAAGAAAAA+AGG | + | chr2_4:18875598-18875617 | Msa0319330:CDS | 35.0% | |
| !! | TTGAAGGCTTGAAAAGCATT+AGG | + | chr2_4:18875680-18875699 | Msa0319330:three_prime_UTR | 35.0% |
| ! | TGTCCCAAAATAGAGTTTTG+AGG | + | chr2_4:18875727-18875746 | Msa0319330:three_prime_UTR | 35.0% |
| ! | TCTAACGAGGAATGTTTTAC+TGG | + | chr2_4:18875932-18875951 | Msa0319330:three_prime_UTR | 35.0% |
| AAATATAATAGTAGCCGAGG+CGG | + | chr2_4:18875983-18876002 | Msa0319330:three_prime_UTR | 35.0% | |
| AAGGGTAATCAGCAGAAGAA+TGG | + | chr2_4:18869484-18869503 | Msa0319330:CDS | 40.0% | |
| GTATGAAAGGTCATGAAGGA+GGG | + | chr2_4:18869548-18869567 | Msa0319330:CDS | 40.0% | |
| ! | TGTTTCACAGAAAGCATGTG+AGG | + | chr2_4:18869618-18869637 | Msa0319330:CDS | 40.0% |
| ! | GTTTCACAGAAAGCATGTGA+GGG | + | chr2_4:18869619-18869638 | Msa0319330:CDS | 40.0% |
| ! | GAAAGTCTGAGAGGTTTTCT+CGG | + | chr2_4:18869674-18869693 | Msa0319330:CDS | 40.0% |
| AATGTCGAAGTTCCAAAGCA+AGG | + | chr2_4:18869760-18869779 | Msa0319330:CDS | 40.0% | |
| AAGTTCCAAAGCAAGGACAT+CGG | + | chr2_4:18869767-18869786 | Msa0319330:CDS | 40.0% | |
| AAATTCCGATGTCCTTGCTT+TGG | - | chr2_4:18869775-18869794 | None:intergenic | 40.0% | |
| GAGTAGATTGAGCCATTTAG+TGG | + | chr2_4:18869828-18869847 | Msa0319330:CDS | 40.0% | |
| AGATTGAGCCATTTAGTGGA+AGG | + | chr2_4:18869832-18869851 | Msa0319330:CDS | 40.0% | |
| ACTGCAAACCTTCCACTAAA+TGG | - | chr2_4:18869843-18869862 | None:intergenic | 40.0% | |
| ATCCGGCTATTAGGAGATTA+CGG | + | chr2_4:18869899-18869918 | Msa0319330:CDS | 40.0% | |
| AACCGTAATCTCCTAATAGC+CGG | - | chr2_4:18869904-18869923 | None:intergenic | 40.0% | |
| CTCTGTAACTGCGGTAAAAA+TGG | - | chr2_4:18869938-18869957 | None:intergenic | 40.0% | |
| ! | TTTTTACCGCAGTTACAGAG+TGG | + | chr2_4:18869938-18869957 | Msa0319330:CDS | 40.0% |
| !! | AGCATAAGCTTCTAAAACGG+TGG | - | chr2_4:18870001-18870020 | None:intergenic | 40.0% |
| CATCCTTCTTCTCGGTTATA+TGG | + | chr2_4:18870163-18870182 | Msa0319330:CDS | 40.0% | |
| CAATATGTGCGTTCTCATGA+CGG | - | chr2_4:18870565-18870584 | None:intergenic | 40.0% | |
| ! | GAATCAGTGCTAGTTTCAGT+TGG | + | chr2_4:18870648-18870667 | Msa0319330:intron | 40.0% |
| ! | TTTTGTAATTGATCAGGGCC+TGG | + | chr2_4:18870851-18870870 | Msa0319330:intron | 40.0% |
| ! | GCTTTGGTAGTTGCTATCAT+TGG | + | chr2_4:18870912-18870931 | Msa0319330:CDS | 40.0% |
| TGCTTGTCTCTCTGCTTATA+CGG | + | chr2_4:18871003-18871022 | Msa0319330:intron | 40.0% | |
| CTGCTTATACGGAAATCTTC+TGG | + | chr2_4:18871014-18871033 | Msa0319330:intron | 40.0% | |
| TATGACACAGTAGTCAATCC+CGG | + | chr2_4:18871081-18871100 | Msa0319330:intron | 40.0% | |
| !! | TATTCCGCTATCCCACTTTT+GGG | - | chr2_4:18871129-18871148 | None:intergenic | 40.0% |
| ATAGAAGAGTGGTGTCTTGT+GGG | + | chr2_4:18871398-18871417 | Msa0319330:intron | 40.0% | |
| !!! | ACCTTTTTGAGGGCATTTTG+GGG | - | chr2_4:18871472-18871491 | None:intergenic | 40.0% |
| TATTGTGCTTGGCTGTATGT+TGG | + | chr2_4:18871818-18871837 | Msa0319330:CDS | 40.0% | |
| ATTGTGCTTGGCTGTATGTT+GGG | + | chr2_4:18871819-18871838 | Msa0319330:CDS | 40.0% | |
| ! | ATGAACAGTCAACCAGGTTT+TGG | + | chr2_4:18871962-18871981 | Msa0319330:CDS | 40.0% |
| GATTCATCGTTTCCAAAACC+TGG | - | chr2_4:18871977-18871996 | None:intergenic | 40.0% | |
| ! | CCATTTTCAGAGGAAGAAGA+CGG | - | chr2_4:18872004-18872023 | None:intergenic | 40.0% |
| ! | TAGACGTTTCAGTACTGAAG+CGG | + | chr2_4:18872167-18872186 | Msa0319330:CDS | 40.0% |
| GAAGCGGGAATATAGAAAGA+AGG | + | chr2_4:18872183-18872202 | Msa0319330:CDS | 40.0% | |
| ATAGAAAGAAGGTTATCCCC+TGG | + | chr2_4:18872194-18872213 | Msa0319330:intron | 40.0% | |
| AAACATGGCTGTGCAAGTAT+TGG | - | chr2_4:18872222-18872241 | None:intergenic | 40.0% | |
| CTCTAGATATTGTGCTCTTC+AGG | + | chr2_4:18872254-18872273 | Msa0319330:intron | 40.0% | |
| CATTACGGCACATTACAGAA+AGG | - | chr2_4:18872407-18872426 | None:intergenic | 40.0% | |
| ! | ACCTGTCTTCATTGATTACC+AGG | + | chr2_4:18872446-18872465 | Msa0319330:intron | 40.0% |
| ! | CATTGATTACCAGGCAATGT+TGG | + | chr2_4:18872455-18872474 | Msa0319330:intron | 40.0% |
| CTCACACTGAAAATCAAGAG+AGG | + | chr2_4:18872568-18872587 | Msa0319330:intron | 40.0% | |
| ! | AAACCTTTCCCTGACTTGTA+TGG | + | chr2_4:18872591-18872610 | Msa0319330:intron | 40.0% |
| TAACCATACAAGTCAGGGAA+AGG | - | chr2_4:18872597-18872616 | None:intergenic | 40.0% | |
| ATTTCAGAATGCTCCACGTA+GGG | + | chr2_4:18872708-18872727 | Msa0319330:CDS | 40.0% | |
| AACATAAATCGTACCCTACG+TGG | - | chr2_4:18872724-18872743 | None:intergenic | 40.0% | |
| TCTTGACCAGAATGCATCAA+AGG | - | chr2_4:18872807-18872826 | None:intergenic | 40.0% | |
| TAACGTCTTAATGGTGAAGG+TGG | + | chr2_4:18872983-18873002 | Msa0319330:intron | 40.0% | |
| AGATACCAGTTCCTAACACA+TGG | - | chr2_4:18873056-18873075 | None:intergenic | 40.0% | |
| CTACACTTTCTCTGATGTAC+TGG | - | chr2_4:18873175-18873194 | None:intergenic | 40.0% | |
| ! | AGAGAAAGTGTAGAGAGACA+AGG | + | chr2_4:18873182-18873201 | Msa0319330:intron | 40.0% |
| ! | AGGAGAGGGCACAAATTAAT+TGG | - | chr2_4:18873383-18873402 | None:intergenic | 40.0% |
| !!! | TGTGTTTTGGAGGGAAATGT+AGG | + | chr2_4:18873516-18873535 | Msa0319330:intron | 40.0% |
| !!! | GTGTTTTGGAGGGAAATGTA+GGG | + | chr2_4:18873517-18873536 | Msa0319330:intron | 40.0% |
| TAACACACCTTAGCGATAGA+AGG | - | chr2_4:18873658-18873677 | None:intergenic | 40.0% | |
| TTCTATCGCTAAGGTGTGTT+AGG | + | chr2_4:18873657-18873676 | Msa0319330:intron | 40.0% | |
| TTGTTAGGCAAGGAAGAGAT+AGG | + | chr2_4:18873758-18873777 | Msa0319330:intron | 40.0% | |
| ATAGGCTCTCTAATTCCTAG+TGG | + | chr2_4:18873776-18873795 | Msa0319330:intron | 40.0% | |
| CTCTAATTCCTAGTGGTTTG+CGG | + | chr2_4:18873783-18873802 | Msa0319330:intron | 40.0% | |
| GGTTAGACAACGACTGAAAA+TGG | - | chr2_4:18873832-18873851 | None:intergenic | 40.0% | |
| ATTCAAATAGCTTCCAGAGG+TGG | - | chr2_4:18873856-18873875 | None:intergenic | 40.0% | |
| CCTATTCAAATAGCTTCCAG+AGG | - | chr2_4:18873859-18873878 | None:intergenic | 40.0% | |
| ! | CCTCTGGAAGCTATTTGAAT+AGG | + | chr2_4:18873856-18873875 | Msa0319330:intron | 40.0% |
| !!! | TTTGGCAGTTGGGTTTTGAA+GGG | - | chr2_4:18873982-18874001 | None:intergenic | 40.0% |
| ! | TAAGGGTATGTTTGGCAGTT+GGG | - | chr2_4:18873992-18874011 | None:intergenic | 40.0% |
| AAGAGATTGCTATAGTGCAG+CGG | + | chr2_4:18874094-18874113 | Msa0319330:intron | 40.0% | |
| TGCGATACACGATTTAGTAC+TGG | + | chr2_4:18874149-18874168 | Msa0319330:intron | 40.0% | |
| ! | TTTTGCCAGAATAGTAGGCA+TGG | + | chr2_4:18874322-18874341 | Msa0319330:intron | 40.0% |
| AGAATCCATGCCTACTATTC+TGG | - | chr2_4:18874330-18874349 | None:intergenic | 40.0% | |
| ! | AGGCATGGATTCTTTTCTTC+GGG | + | chr2_4:18874337-18874356 | Msa0319330:CDS | 40.0% |
| ! | GGATTCTTTTCTTCGGGATT+TGG | + | chr2_4:18874343-18874362 | Msa0319330:CDS | 40.0% |
| ! | CAAGGAGAATAGCTTGCAAA+AGG | + | chr2_4:18874404-18874423 | Msa0319330:CDS | 40.0% |
| ! | AGAATAGCTTGCAAAAGGTG+TGG | + | chr2_4:18874409-18874428 | Msa0319330:CDS | 40.0% |
| CACCAAGAAACAAAAGTCTC+GGG | + | chr2_4:18874453-18874472 | Msa0319330:CDS | 40.0% | |
| AAAAGGGTGAAGAAGAAACC+TGG | - | chr2_4:18874489-18874508 | None:intergenic | 40.0% | |
| ! | TCAAGATTTTCACCAAGCCA+AGG | + | chr2_4:18874712-18874731 | Msa0319330:CDS | 40.0% |
| CATCTAATACAGCCAGGAAT+TGG | - | chr2_4:18874883-18874902 | None:intergenic | 40.0% | |
| ACTTCACATCTAATACAGCC+AGG | - | chr2_4:18874889-18874908 | None:intergenic | 40.0% | |
| CTGACAGATATACCATTCAG+TGG | - | chr2_4:18875006-18875025 | None:intergenic | 40.0% | |
| CACTGAATGGTATATCTGTC+AGG | + | chr2_4:18875004-18875023 | Msa0319330:CDS | 40.0% | |
| AAATGTCATGGCTGAGTTCT+TGG | - | chr2_4:18875069-18875088 | None:intergenic | 40.0% | |
| CTGGTGTTCACATGAAAACT+TGG | - | chr2_4:18875328-18875347 | None:intergenic | 40.0% | |
| ! | GAACTAGCTCTTCAACTCAA+AGG | + | chr2_4:18875377-18875396 | Msa0319330:CDS | 40.0% |
| ! | ACTAGCTCTTCAACTCAAAG+GGG | + | chr2_4:18875379-18875398 | Msa0319330:CDS | 40.0% |
| !! | TTAGGTGTTGGCATATTAGG+AGG | - | chr2_4:18875421-18875440 | None:intergenic | 40.0% |
| !! | TTTTGAAGAAACCATGACCG+AGG | + | chr2_4:18875441-18875460 | Msa0319330:CDS | 40.0% |
| TTACAGAATGCTGTACAGTC+AGG | + | chr2_4:18875481-18875500 | Msa0319330:CDS | 40.0% | |
| ! | TCATGCCATTTCCAGATTTG+GGG | - | chr2_4:18875552-18875571 | None:intergenic | 40.0% |
| GGAAATGGCATGAAAAATCC+TGG | + | chr2_4:18875559-18875578 | Msa0319330:CDS | 40.0% | |
| ! | CCAAGGCTGTATATTTTGCA+CGG | - | chr2_4:18875827-18875846 | None:intergenic | 40.0% |
| CGTGCAAAATATACAGCCTT+GGG | + | chr2_4:18875825-18875844 | Msa0319330:three_prime_UTR | 40.0% | |
| GTGCAAAATATACAGCCTTG+GGG | + | chr2_4:18875826-18875845 | Msa0319330:three_prime_UTR | 40.0% | |
| AAAACATCATGCATCGTGCA+TGG | + | chr2_4:18875903-18875922 | Msa0319330:three_prime_UTR | 40.0% | |
| TGCATGGATCATATCTAACG+AGG | + | chr2_4:18875919-18875938 | Msa0319330:three_prime_UTR | 40.0% | |
| ! | TGAAGAGCATAGATTCGTGT+TGG | - | chr2_4:18876011-18876030 | None:intergenic | 40.0% |
| !! | CTTGACCGATACTGGCTTAT+TGG | - | chr2_4:18868752-18868771 | None:intergenic | 45.0% |
| TGAGTTACGTAGCGCGATTA+TGG | - | chr2_4:18868869-18868888 | None:intergenic | 45.0% | |
| TAATCGCGCTACGTAACTCA+AGG | + | chr2_4:18868869-18868888 | Msa0319330:five_prime_UTR | 45.0% | |
| AATCACAGAAAAGGGGGTTC+TGG | + | chr2_4:18869511-18869530 | Msa0319330:CDS | 45.0% | |
| ATCACAGAAAAGGGGGTTCT+GGG | + | chr2_4:18869512-18869531 | Msa0319330:CDS | 45.0% | |
| CCTTCATGACCTTTCATACC+CGG | - | chr2_4:18869547-18869566 | None:intergenic | 45.0% | |
| GGTATGAAAGGTCATGAAGG+AGG | + | chr2_4:18869547-18869566 | Msa0319330:CDS | 45.0% | |
| GAACTTGCAAATGGTGGTCA+TGG | + | chr2_4:18869595-18869614 | Msa0319330:CDS | 45.0% | |
| ACAATGAGCGAAAGTCTGAG+AGG | + | chr2_4:18869665-18869684 | Msa0319330:CDS | 45.0% | |
| TCGGAAAGATAAGCATGACC+TGG | + | chr2_4:18869693-18869712 | Msa0319330:CDS | 45.0% | |
| GAAAGATAAGCATGACCTGG+AGG | + | chr2_4:18869696-18869715 | Msa0319330:CDS | 45.0% | |
| TGGAGGAATCATCGTCCTTT+GGG | + | chr2_4:18869713-18869732 | Msa0319330:CDS | 45.0% | |
| TCTCCTAATAGCCGGATGAT+CGG | - | chr2_4:18869896-18869915 | None:intergenic | 45.0% | |
| ! | GATTAGCCACTCTGTAACTG+CGG | - | chr2_4:18869947-18869966 | None:intergenic | 45.0% |
| CAGTTACAGAGTGGCTAATC+AGG | + | chr2_4:18869947-18869966 | Msa0319330:CDS | 45.0% | |
| CATATCCCATTGTTCTGACG+TGG | + | chr2_4:18870046-18870065 | Msa0319330:CDS | 45.0% | |
| ATGAGCCACGTCAGAACAAT+GGG | - | chr2_4:18870054-18870073 | None:intergenic | 45.0% | |
| GCACCATATAACCGAGAAGA+AGG | - | chr2_4:18870169-18870188 | None:intergenic | 45.0% | |
| GATAGGGATGCTCAAGTTTC+TGG | + | chr2_4:18870212-18870231 | Msa0319330:CDS | 45.0% | |
| AATTGTTACCAGGGCTTACC+AGG | - | chr2_4:18870242-18870261 | None:intergenic | 45.0% | |
| CGTCATGAGAACGCACATAT+TGG | + | chr2_4:18870563-18870582 | Msa0319330:intron | 45.0% | |
| AAAATCCAATCAAGGCAGCC+AGG | - | chr2_4:18870872-18870891 | None:intergenic | 45.0% | |
| !! | ATTCCGCTATCCCACTTTTG+GGG | - | chr2_4:18871128-18871147 | None:intergenic | 45.0% |
| ! | CTATTCCGCTATCCCACTTT+TGG | - | chr2_4:18871130-18871149 | None:intergenic | 45.0% |
| !! | GATAGCGGAATAGCGTATAG+CGG | + | chr2_4:18871137-18871156 | Msa0319330:intron | 45.0% |
| CAACTGGTAAACAAGACCTG+GGG | - | chr2_4:18871374-18871393 | None:intergenic | 45.0% | |
| CCAACTGGTAAACAAGACCT+GGG | - | chr2_4:18871375-18871394 | None:intergenic | 45.0% | |
| TCCAACTGGTAAACAAGACC+TGG | - | chr2_4:18871376-18871395 | None:intergenic | 45.0% | |
| CCACTCTTCTATCTTCCAAC+TGG | - | chr2_4:18871390-18871409 | None:intergenic | 45.0% | |
| CCAGTTGGAAGATAGAAGAG+TGG | + | chr2_4:18871387-18871406 | Msa0319330:intron | 45.0% | |
| GATAGAAGAGTGGTGTCTTG+TGG | + | chr2_4:18871397-18871416 | Msa0319330:intron | 45.0% | |
| TAGAAGAGTGGTGTCTTGTG+GGG | + | chr2_4:18871399-18871418 | Msa0319330:intron | 45.0% | |
| TCCCCAAAATGCCCTCAAAA+AGG | + | chr2_4:18871468-18871487 | Msa0319330:intron | 45.0% | |
| ATAGCAGCGACAAACCACTA+CGG | - | chr2_4:18871626-18871645 | None:intergenic | 45.0% | |
| TATGTTACGTCATGAACGCG+TGG | + | chr2_4:18871766-18871785 | Msa0319330:CDS | 45.0% | |
| ! | CCGTCTTCTTCCTCTGAAAA+TGG | + | chr2_4:18872001-18872020 | Msa0319330:CDS | 45.0% |
| ! | TCTTCCTCTGAAAATGGACC+AGG | + | chr2_4:18872007-18872026 | Msa0319330:CDS | 45.0% |
| ! | AGACGTTTCAGTACTGAAGC+GGG | + | chr2_4:18872168-18872187 | Msa0319330:CDS | 45.0% |
| GCCTGGTAATCAATGAAGAC+AGG | - | chr2_4:18872450-18872469 | None:intergenic | 45.0% | |
| GATTTCAGAATGCTCCACGT+AGG | + | chr2_4:18872707-18872726 | Msa0319330:CDS | 45.0% | |
| GTGATCAGTAGCCATGTGTT+AGG | + | chr2_4:18873042-18873061 | Msa0319330:intron | 45.0% | |
| AGTAGCCATGTGTTAGGAAC+TGG | + | chr2_4:18873048-18873067 | Msa0319330:intron | 45.0% | |
| ! | TCTGATGTACTGGTGTGTGA+AGG | - | chr2_4:18873165-18873184 | None:intergenic | 45.0% |
| CTTCGAAGAATTAGAGAGCC+TGG | + | chr2_4:18873265-18873284 | Msa0319330:intron | 45.0% | |
| GAGAACAACGTAAGAGGAGA+GGG | - | chr2_4:18873397-18873416 | None:intergenic | 45.0% | |
| AGAGAACAACGTAAGAGGAG+AGG | - | chr2_4:18873398-18873417 | None:intergenic | 45.0% | |
| TGGTAGACCTTCTATCGCTA+AGG | + | chr2_4:18873648-18873667 | Msa0319330:intron | 45.0% | |
| TGCAAAAACCGCAAACCACT+AGG | - | chr2_4:18873794-18873813 | None:intergenic | 45.0% | |
| !! | GTTTGGCAGTTGGGTTTTGA+AGG | - | chr2_4:18873983-18874002 | None:intergenic | 45.0% |
| ! | CTAAGGGTATGTTTGGCAGT+TGG | - | chr2_4:18873993-18874012 | None:intergenic | 45.0% |
| CAAGGTTCTCTAAATGGAGC+TGG | - | chr2_4:18874039-18874058 | None:intergenic | 45.0% | |
| TTTGGCCATTCAGATGCAGA+TGG | + | chr2_4:18874361-18874380 | Msa0319330:CDS | 45.0% | |
| ! | AGGACCCATTTGGTGAATCA+AGG | + | chr2_4:18874386-18874405 | Msa0319330:CDS | 45.0% |
| ! | ATAGCTTGCAAAAGGTGTGG+CGG | + | chr2_4:18874412-18874431 | Msa0319330:CDS | 45.0% |
| !! | TGCCCGAGACTTTTGTTTCT+TGG | - | chr2_4:18874458-18874477 | None:intergenic | 45.0% |
| AACAAAAGTCTCGGGCAAGA+TGG | + | chr2_4:18874461-18874480 | Msa0319330:CDS | 45.0% | |
| ATGAAGCCTTAAGCATGCTC+AGG | + | chr2_4:18874533-18874552 | Msa0319330:intron | 45.0% | |
| TTGTCACCTGAGCATGCTTA+AGG | - | chr2_4:18874542-18874561 | None:intergenic | 45.0% | |
| AAGCATGCTCAGGTGACAAT+TGG | + | chr2_4:18874543-18874562 | Msa0319330:intron | 45.0% | |
| ! | GATTTTCACCAAGCCAAGGA+TGG | + | chr2_4:18874716-18874735 | Msa0319330:CDS | 45.0% |
| TCGAAACAAAATCCCGGCAA+AGG | + | chr2_4:18875355-18875374 | Msa0319330:CDS | 45.0% | |
| TGAAGAGCTAGTTCCTTTGC+CGG | - | chr2_4:18875371-18875390 | None:intergenic | 45.0% | |
| GTTGGCATATTAGGAGGAGT+TGG | - | chr2_4:18875415-18875434 | None:intergenic | 45.0% | |
| GGCGCGTTTGACAATTTCAA+CGG | + | chr2_4:18875502-18875521 | Msa0319330:CDS | 45.0% | |
| GCGTTTGACAATTTCAACGG+TGG | + | chr2_4:18875505-18875524 | Msa0319330:CDS | 45.0% | |
| CATTTCCAGATTTGGGGGAT+GGG | - | chr2_4:18875546-18875565 | None:intergenic | 45.0% | |
| ! | CATGCCATTTCCAGATTTGG+GGG | - | chr2_4:18875551-18875570 | None:intergenic | 45.0% |
| ! | TGCCTTGTTGTGCACTTTGA+AGG | + | chr2_4:18875664-18875683 | Msa0319330:three_prime_UTR | 45.0% |
| AGCCTTCAAAGTGCACAACA+AGG | - | chr2_4:18875669-18875688 | None:intergenic | 45.0% | |
| CCGTGCAAAATATACAGCCT+TGG | + | chr2_4:18875824-18875843 | Msa0319330:three_prime_UTR | 45.0% | |
| CTAGGAAGATCATACGCACA+AGG | - | chr2_4:18875859-18875878 | None:intergenic | 45.0% | |
| !!! | ATTATTTTTATCTTTTTTTA+CGG | + | chr2_4:18871045-18871064 | Msa0319330:intron | 5.0% |
| !! | AGAAAAAAAAAAAAAAAAAA+GGG | - | chr2_4:18874505-18874524 | None:intergenic | 5.0% |
| TCACAGAAAAGGGGGTTCTG+GGG | + | chr2_4:18869513-18869532 | Msa0319330:CDS | 50.0% | |
| GGTGTACTTCCGGGTATGAA+AGG | + | chr2_4:18869535-18869554 | Msa0319330:CDS | 50.0% | |
| CCGGGTATGAAAGGTCATGA+AGG | + | chr2_4:18869544-18869563 | Msa0319330:CDS | 50.0% | |
| ! | AGGGCAGGTGAAGGTTTTTC+CGG | + | chr2_4:18869567-18869586 | Msa0319330:CDS | 50.0% |
| CCATTTGCAAGTTCCTCAGC+CGG | - | chr2_4:18869589-18869608 | None:intergenic | 50.0% | |
| GCTGAGGAACTTGCAAATGG+TGG | + | chr2_4:18869589-18869608 | Msa0319330:CDS | 50.0% | |
| CAAAGGACGATGATTCCTCC+AGG | - | chr2_4:18869714-18869733 | None:intergenic | 50.0% | |
| CTGGAGGAATCATCGTCCTT+TGG | + | chr2_4:18869712-18869731 | Msa0319330:CDS | 50.0% | |
| TTCAGAGCTTGCCGATCATC+CGG | + | chr2_4:18869882-18869901 | Msa0319330:CDS | 50.0% | |
| TTGCCGATCATCCGGCTATT+AGG | + | chr2_4:18869890-18869909 | Msa0319330:CDS | 50.0% | |
| CATGAGCCACGTCAGAACAA+TGG | - | chr2_4:18870055-18870074 | None:intergenic | 50.0% | |
| TGACGTGGCTCATGCACTTT+GGG | + | chr2_4:18870061-18870080 | Msa0319330:CDS | 50.0% | |
| GGGTACGACATCCTTCTTCT+CGG | + | chr2_4:18870155-18870174 | Msa0319330:CDS | 50.0% | |
| !! | GCTCAAGTTTCTGGTTGTCC+TGG | + | chr2_4:18870221-18870240 | Msa0319330:CDS | 50.0% |
| TGGGTTCGTGATTGCAGCTT+TGG | + | chr2_4:18870896-18870915 | Msa0319330:CDS | 50.0% | |
| CAGTAGTCAATCCCGGATAG+CGG | + | chr2_4:18871088-18871107 | Msa0319330:intron | 50.0% | |
| CAACCCCAAAAGTGGGATAG+CGG | + | chr2_4:18871122-18871141 | Msa0319330:intron | 50.0% | |
| GAAAGAGAGAAGAGATCCCC+AGG | + | chr2_4:18871355-18871374 | Msa0319330:intron | 50.0% | |
| !! | CCCAGGTCTTGTTTACCAGT+TGG | + | chr2_4:18871372-18871391 | Msa0319330:intron | 50.0% |
| ! | AGCCGCTTTAGCTGCTATAG+CGG | - | chr2_4:18871572-18871591 | None:intergenic | 50.0% |
| CACTACGGTAATCGTCGTAG+CGG | - | chr2_4:18871611-18871630 | None:intergenic | 50.0% | |
| GCTGGAATGAACAGTCAACC+AGG | + | chr2_4:18871956-18871975 | Msa0319330:CDS | 50.0% | |
| ! | TGGTCCTGGTCCATTTTCAG+AGG | - | chr2_4:18872014-18872033 | None:intergenic | 50.0% |
| TTACGATCTGCAGATGGTCC+TGG | - | chr2_4:18872028-18872047 | None:intergenic | 50.0% | |
| CCTGCATTACGATCTGCAGA+TGG | - | chr2_4:18872034-18872053 | None:intergenic | 50.0% | |
| CCATCTGCAGATCGTAATGC+AGG | + | chr2_4:18872031-18872050 | Msa0319330:CDS | 50.0% | |
| !! | TGTGCAAGTATTGGCACCAG+GGG | - | chr2_4:18872213-18872232 | None:intergenic | 50.0% |
| !! | CTGTGCAAGTATTGGCACCA+GGG | - | chr2_4:18872214-18872233 | None:intergenic | 50.0% |
| CAGGATGTACCAACATTGCC+TGG | - | chr2_4:18872467-18872486 | None:intergenic | 50.0% | |
| CAAATAGCTTCCAGAGGTGG+TGG | - | chr2_4:18873853-18873872 | None:intergenic | 50.0% | |
| CCTCACCATCTGCATCTGAA+TGG | - | chr2_4:18874369-18874388 | None:intergenic | 50.0% | |
| CCATTCAGATGCAGATGGTG+AGG | + | chr2_4:18874366-18874385 | Msa0319330:CDS | 50.0% | |
| TGCTGACAGTGACAGGATAC+TGG | - | chr2_4:18874595-18874614 | None:intergenic | 50.0% | |
| ATGTGCATGCTGACAGTGAC+AGG | - | chr2_4:18874602-18874621 | None:intergenic | 50.0% | |
| ATCCATCACCATCCTTGGCT+TGG | - | chr2_4:18874727-18874746 | None:intergenic | 50.0% | |
| !! | AAGCCAAGGATGGTGATGGA+TGG | + | chr2_4:18874726-18874745 | Msa0319330:CDS | 50.0% |
| !! | AGCCAAGGATGGTGATGGAT+GGG | + | chr2_4:18874727-18874746 | Msa0319330:CDS | 50.0% |
| AACCCATCCATCACCATCCT+TGG | - | chr2_4:18874732-18874751 | None:intergenic | 50.0% | |
| TCCTTCTGCTTACGTGTGTG+CGG | + | chr2_4:18874962-18874981 | Msa0319330:CDS | 50.0% | |
| GAAGAGCTAGTTCCTTTGCC+GGG | - | chr2_4:18875370-18875389 | None:intergenic | 50.0% | |
| AGCTCTTCAACTCAAAGGGG+TGG | + | chr2_4:18875382-18875401 | Msa0319330:CDS | 50.0% | |
| GCTCTTCAACTCAAAGGGGT+GGG | + | chr2_4:18875383-18875402 | Msa0319330:CDS | 50.0% | |
| GACGAATTCTTCCTCGGTCA+TGG | - | chr2_4:18875455-18875474 | None:intergenic | 50.0% | |
| CCACTCGACGAATTCTTCCT+CGG | - | chr2_4:18875461-18875480 | None:intergenic | 50.0% | |
| CCATTTCCAGATTTGGGGGA+TGG | - | chr2_4:18875547-18875566 | None:intergenic | 50.0% | |
| CCATCCCCCAAATCTGGAAA+TGG | + | chr2_4:18875544-18875563 | Msa0319330:CDS | 50.0% | |
| GGCATGAAAAATCCTGGCAC+TGG | + | chr2_4:18875565-18875584 | Msa0319330:CDS | 50.0% | |
| !! | AAAAATCCTGGCACTGGCGT+TGG | + | chr2_4:18875571-18875590 | Msa0319330:CDS | 50.0% |
| ! | CACAGAAAAGGGGGTTCTGG+GGG | + | chr2_4:18869514-18869533 | Msa0319330:CDS | 55.0% |
| GAAAGGTCATGAAGGAGGGC+AGG | + | chr2_4:18869552-18869571 | Msa0319330:CDS | 55.0% | |
| TCATGAAGGAGGGCAGGTGA+AGG | + | chr2_4:18869558-18869577 | Msa0319330:CDS | 55.0% | |
| ! | GGTGAAGGTTTTTCCGGCTG+AGG | + | chr2_4:18869573-18869592 | Msa0319330:CDS | 55.0% |
| CCGGCTGAGGAACTTGCAAA+TGG | + | chr2_4:18869586-18869605 | Msa0319330:CDS | 55.0% | |
| GCATGTGAGGGTTGTTCTGC+TGG | + | chr2_4:18869631-18869650 | Msa0319330:CDS | 55.0% | |
| CTGACGTGGCTCATGCACTT+TGG | + | chr2_4:18870060-18870079 | Msa0319330:CDS | 55.0% | |
| ! | TGGTTGGACTGTGCTGTTCG+AGG | + | chr2_4:18870111-18870130 | Msa0319330:CDS | 55.0% |
| TAGCGGCCAACCCCAAAAGT+GGG | + | chr2_4:18871115-18871134 | Msa0319330:intron | 55.0% | |
| !!! | CGCTATCCCACTTTTGGGGT+TGG | - | chr2_4:18871124-18871143 | None:intergenic | 55.0% |
| CGCTTTAGCTGCTATAGCGG+CGG | - | chr2_4:18871569-18871588 | None:intergenic | 55.0% | |
| CGCCGCTATAGCAGCTAAAG+CGG | + | chr2_4:18871567-18871586 | Msa0319330:intron | 55.0% | |
| CGCTACGACGATTACCGTAG+TGG | + | chr2_4:18871609-18871628 | Msa0319330:intron | 55.0% | |
| GTGCTTGGCTGTATGTTGGG+TGG | + | chr2_4:18871822-18871841 | Msa0319330:CDS | 55.0% | |
| TGGGTGGCTTCGCTTGTTCT+TGG | + | chr2_4:18871838-18871857 | Msa0319330:CDS | 55.0% | |
| AATCAGCCCCACTAGTCGAG+GGG | - | chr2_4:18872060-18872079 | None:intergenic | 55.0% | |
| GAATCAGCCCCACTAGTCGA+GGG | - | chr2_4:18872061-18872080 | None:intergenic | 55.0% | |
| AGAATCAGCCCCACTAGTCG+AGG | - | chr2_4:18872062-18872081 | None:intergenic | 55.0% | |
| !! | GCTGTGCAAGTATTGGCACC+AGG | - | chr2_4:18872215-18872234 | None:intergenic | 55.0% |
| GTTATAGGGGAGAGAGAGCC+AGG | - | chr2_4:18873286-18873305 | None:intergenic | 55.0% | |
| CGTTGTCTAACCACCACCTC+TGG | + | chr2_4:18873840-18873859 | Msa0319330:intron | 55.0% | |
| GCAGATGGTGAGGACCCATT+TGG | + | chr2_4:18874376-18874395 | Msa0319330:CDS | 55.0% | |
| CACCAAGCCAAGGATGGTGA+TGG | + | chr2_4:18874722-18874741 | Msa0319330:CDS | 55.0% | |
| TCCGCACACACGTAAGCAGA+AGG | - | chr2_4:18874966-18874985 | None:intergenic | 55.0% | |
| CTTGCACTCTGAGCCTTCTC+TGG | + | chr2_4:18875226-18875245 | Msa0319330:intron | 55.0% | |
| CTTCAACTCAAAGGGGTGGG+CGG | + | chr2_4:18875386-18875405 | Msa0319330:CDS | 55.0% | |
| TTCAACTCAAAGGGGTGGGC+GGG | + | chr2_4:18875387-18875406 | Msa0319330:CDS | 55.0% | |
| CCGAGGAAGAATTCGTCGAG+TGG | + | chr2_4:18875458-18875477 | Msa0319330:CDS | 55.0% | |
| GAAAGCCCATCCCCCAAATC+TGG | + | chr2_4:18875538-18875557 | Msa0319330:CDS | 55.0% | |
| GCACAAGGATCATTGCCCCA+AGG | - | chr2_4:18875844-18875863 | None:intergenic | 55.0% | |
| !! | GGGTTCTGGGGGTGTACTTC+CGG | + | chr2_4:18869525-18869544 | Msa0319330:CDS | 60.0% |
| !! | GGTTCTGGGGGTGTACTTCC+GGG | + | chr2_4:18869526-18869545 | Msa0319330:CDS | 60.0% |
| CTGGTTGTCCTGGTAAGCCC+TGG | + | chr2_4:18870231-18870250 | Msa0319330:intron | 60.0% | |
| GTAGCGGCCAACCCCAAAAG+TGG | + | chr2_4:18871114-18871133 | Msa0319330:intron | 60.0% | |
| AGAGTGGTGTCTTGTGGGGC+AGG | + | chr2_4:18871403-18871422 | Msa0319330:intron | 60.0% | |
| CGGTAATCGTCGTAGCGGTG+CGG | - | chr2_4:18871606-18871625 | None:intergenic | 60.0% | |
| CAGGAGTCCCCTCGACTAGT+GGG | + | chr2_4:18872050-18872069 | Msa0319330:CDS | 60.0% | |
| AGGAGTCCCCTCGACTAGTG+GGG | + | chr2_4:18872051-18872070 | Msa0319330:CDS | 60.0% | |
| GGTGTGGCGGCTTTCATCTC+TGG | + | chr2_4:18874425-18874444 | Msa0319330:CDS | 60.0% | |
| !! | GATTCGTGTTGGTGCCGCCT+CGG | - | chr2_4:18876000-18876019 | None:intergenic | 60.0% |
| CAGGGCCTGGCTGCCTTGAT+TGG | + | chr2_4:18870864-18870883 | Msa0319330:intron | 65.0% | |
| ! | TCCCGGATAGCGGTGCGTAG+CGG | + | chr2_4:18871098-18871117 | Msa0319330:intron | 65.0% |
| GCTATAGCGGCGGAGCGTAG+CGG | - | chr2_4:18871559-18871578 | None:intergenic | 65.0% | |
| GCAGGAGTCCCCTCGACTAG+TGG | + | chr2_4:18872049-18872068 | Msa0319330:CDS | 65.0% | |
| GTCTCGGGCAAGATGGTGCC+AGG | + | chr2_4:18874468-18874487 | Msa0319330:CDS | 65.0% | |
| CCACTACCAACGCCAGTGCC+AGG | - | chr2_4:18875580-18875599 | None:intergenic | 65.0% | |
| !! | CCTGGCACTGGCGTTGGTAG+TGG | + | chr2_4:18875577-18875596 | Msa0319330:CDS | 65.0% |
| GCCGCTACGCACCGCTATCC+GGG | - | chr2_4:18871102-18871121 | None:intergenic | 70.0% | |
| GGCCGCTACGCACCGCTATC+CGG | - | chr2_4:18871103-18871122 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 18868587 | 18876054 | 18868587 | ID=Msa0319330;Name=Msa0319330 |
| chr2_4 | mRNA | 18868587 | 18876054 | 18868587 | ID=Msa0319330-mRNA-1;Parent=Msa0319330;Name=Msa0319330-mRNA-1;_AED=0.03;_eAED=0.03;_QI=392|1|1|1|0.88|0.8|10|421|727 |
| chr2_4 | exon | 18868587 | 18868890 | 18868587 | ID=Msa0319330-mRNA-1:exon:7057;Parent=Msa0319330-mRNA-1 |
| chr2_4 | exon | 18869387 | 18870242 | 18869387 | ID=Msa0319330-mRNA-1:exon:7058;Parent=Msa0319330-mRNA-1 |
| chr2_4 | exon | 18870867 | 18870996 | 18870867 | ID=Msa0319330-mRNA-1:exon:7059;Parent=Msa0319330-mRNA-1 |
| chr2_4 | exon | 18871756 | 18872204 | 18871756 | ID=Msa0319330-mRNA-1:exon:7060;Parent=Msa0319330-mRNA-1 |
| chr2_4 | exon | 18872468 | 18872548 | 18872468 | ID=Msa0319330-mRNA-1:exon:7061;Parent=Msa0319330-mRNA-1 |
| chr2_4 | exon | 18872631 | 18872729 | 18872631 | ID=Msa0319330-mRNA-1:exon:7062;Parent=Msa0319330-mRNA-1 |
| chr2_4 | exon | 18874331 | 18874489 | 18874331 | ID=Msa0319330-mRNA-1:exon:7063;Parent=Msa0319330-mRNA-1 |
| chr2_4 | exon | 18874707 | 18874793 | 18874707 | ID=Msa0319330-mRNA-1:exon:7064;Parent=Msa0319330-mRNA-1 |
| chr2_4 | exon | 18874954 | 18875025 | 18874954 | ID=Msa0319330-mRNA-1:exon:7065;Parent=Msa0319330-mRNA-1 |
| chr2_4 | exon | 18875295 | 18876054 | 18875295 | ID=Msa0319330-mRNA-1:exon:7066;Parent=Msa0319330-mRNA-1 |
| chr2_4 | five_prime_UTR | 18868587 | 18868890 | 18868587 | ID=Msa0319330-mRNA-1:five_prime_utr;Parent=Msa0319330-mRNA-1 |
| chr2_4 | five_prime_UTR | 18869387 | 18869474 | 18869387 | ID=Msa0319330-mRNA-1:five_prime_utr;Parent=Msa0319330-mRNA-1 |
| chr2_4 | CDS | 18869475 | 18870242 | 18869475 | ID=Msa0319330-mRNA-1:cds;Parent=Msa0319330-mRNA-1 |
| chr2_4 | CDS | 18870867 | 18870996 | 18870867 | ID=Msa0319330-mRNA-1:cds;Parent=Msa0319330-mRNA-1 |
| chr2_4 | CDS | 18871756 | 18872204 | 18871756 | ID=Msa0319330-mRNA-1:cds;Parent=Msa0319330-mRNA-1 |
| chr2_4 | CDS | 18872468 | 18872548 | 18872468 | ID=Msa0319330-mRNA-1:cds;Parent=Msa0319330-mRNA-1 |
| chr2_4 | CDS | 18872631 | 18872729 | 18872631 | ID=Msa0319330-mRNA-1:cds;Parent=Msa0319330-mRNA-1 |
| chr2_4 | CDS | 18874331 | 18874489 | 18874331 | ID=Msa0319330-mRNA-1:cds;Parent=Msa0319330-mRNA-1 |
| chr2_4 | CDS | 18874707 | 18874793 | 18874707 | ID=Msa0319330-mRNA-1:cds;Parent=Msa0319330-mRNA-1 |
| chr2_4 | CDS | 18874954 | 18875025 | 18874954 | ID=Msa0319330-mRNA-1:cds;Parent=Msa0319330-mRNA-1 |
| chr2_4 | CDS | 18875295 | 18875633 | 18875295 | ID=Msa0319330-mRNA-1:cds;Parent=Msa0319330-mRNA-1 |
| chr2_4 | three_prime_UTR | 18875634 | 18876054 | 18875634 | ID=Msa0319330-mRNA-1:three_prime_utr;Parent=Msa0319330-mRNA-1 |
| Gene Sequence |
| Protein sequence |
