Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0602900 | XP_004487038.1 | 97.386 | 153 | 4 | 0 | 1 | 153 | 1 | 153 | 3.73e-100 | 294 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0602900 | sp|Q9AT35|RL23A_DAUCA | 87.013 | 154 | 19 | 1 | 1 | 153 | 1 | 154 | 4.60e-82 | 241 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001760 | Msa0602900 | 0.847010 | 1.515361e-59 | -8.615850e-47 |
| Msa0002430 | Msa0602900 | 0.805414 | 1.350498e-49 | -8.615850e-47 |
| Msa0003330 | Msa0602900 | 0.837429 | 5.224606e-57 | -8.615850e-47 |
| Msa0016340 | Msa0602900 | 0.808274 | 3.356546e-50 | -8.615850e-47 |
| Msa0027590 | Msa0602900 | 0.858562 | 7.567073e-63 | -8.615850e-47 |
| Msa0040220 | Msa0602900 | 0.859246 | 4.724303e-63 | -8.615850e-47 |
| Msa0042510 | Msa0602900 | 0.840261 | 9.675123e-58 | -8.615850e-47 |
| Msa0071640 | Msa0602900 | 0.800522 | 1.385401e-48 | -8.615850e-47 |
| Msa0071760 | Msa0602900 | 0.852155 | 5.557508e-61 | -8.615850e-47 |
| Msa0072570 | Msa0602900 | 0.816901 | 4.353582e-52 | -8.615850e-47 |
| Msa0075350 | Msa0602900 | 0.801541 | 8.576497e-49 | -8.615850e-47 |
| Msa0079560 | Msa0602900 | 0.851133 | 1.081932e-60 | -8.615850e-47 |
| Msa0086160 | Msa0602900 | 0.875943 | 2.067024e-68 | -8.615850e-47 |
| Msa0087910 | Msa0602900 | 0.885457 | 7.995903e-72 | -8.615850e-47 |
| Msa0089540 | Msa0602900 | 0.839758 | 1.308246e-57 | -8.615850e-47 |
| Msa0094210 | Msa0602900 | 0.800428 | 1.448178e-48 | -8.615850e-47 |
| Msa0114600 | Msa0602900 | 0.885208 | 9.911225e-72 | -8.615850e-47 |
| Msa0116600 | Msa0602900 | 0.827405 | 1.592966e-54 | -8.615850e-47 |
| Msa0116690 | Msa0602900 | 0.823749 | 1.171180e-53 | -8.615850e-47 |
| Msa0602900 | Msa0605600 | 0.822823 | 1.927426e-53 | -8.615850e-47 |
| Msa0602900 | Msa0605890 | 0.907820 | 3.349617e-81 | -8.615850e-47 |
| Msa0602900 | Msa0609120 | 0.830209 | 3.340878e-55 | -8.615850e-47 |
| Msa0602900 | Msa0619230 | 0.906381 | 1.577233e-80 | -8.615850e-47 |
| Msa0602900 | Msa0621190 | 0.820209 | 7.741471e-53 | -8.615850e-47 |
| Msa0602900 | Msa0622230 | 0.821006 | 5.078333e-53 | -8.615850e-47 |
| Msa0602900 | Msa0643960 | 0.998496 | 8.308333e-267 | -8.615850e-47 |
| Msa0602900 | Msa0649890 | 0.827461 | 1.544959e-54 | -8.615850e-47 |
| Msa0602900 | Msa0653060 | 0.820423 | 6.914142e-53 | -8.615850e-47 |
| Msa0602900 | Msa0656450 | 0.859225 | 4.790508e-63 | -8.615850e-47 |
| Msa0602900 | Msa0663400 | 0.850501 | 1.630052e-60 | -8.615850e-47 |
| Msa0602900 | Msa0667110 | 0.802372 | 5.787934e-49 | -8.615850e-47 |
| Msa0602900 | Msa0686550 | 0.831764 | 1.387168e-55 | -8.615850e-47 |
| Msa0602900 | Msa0686660 | 0.817238 | 3.658330e-52 | -8.615850e-47 |
| Msa0602900 | Msa0691760 | 0.808933 | 2.427842e-50 | -8.615850e-47 |
| Msa0602900 | Msa0694400 | 0.913956 | 3.367356e-84 | -8.615850e-47 |
| Msa0602900 | Msa0704860 | 0.872882 | 2.260151e-67 | -8.615850e-47 |
| Msa0602900 | Msa0708630 | 0.903526 | 3.168467e-79 | -8.615850e-47 |
| Msa0602900 | Msa0715970 | 0.812707 | 3.701715e-51 | -8.615850e-47 |
| Msa0602900 | Msa0718560 | 0.810147 | 1.331937e-50 | -8.615850e-47 |
| Msa0602900 | Msa0741510 | 0.865045 | 7.846584e-65 | -8.615850e-47 |
| Msa0602900 | Msa0748350 | 0.847660 | 1.004872e-59 | -8.615850e-47 |
| Msa0602900 | Msa0749000 | 0.805162 | 1.524956e-49 | -8.615850e-47 |
| Msa0602900 | Msa0788380 | 0.806216 | 9.160661e-50 | -8.615850e-47 |
| Msa0602900 | Msa0790450 | 0.893366 | 6.723949e-75 | -8.615850e-47 |
| Msa0602900 | Msa0796490 | 0.829160 | 6.013855e-55 | -8.615850e-47 |
| Msa0602900 | Msa0798590 | 0.864134 | 1.513240e-64 | -8.615850e-47 |
| Msa0602900 | Msa0880050 | 0.808026 | 3.790936e-50 | -8.615850e-47 |
| Msa0602900 | Msa0902220 | 0.809599 | 1.747317e-50 | -8.615850e-47 |
| Msa0602900 | Msa0902730 | 0.818156 | 2.270768e-52 | -8.615850e-47 |
| Msa0602900 | Msa0927910 | 0.811803 | 5.831321e-51 | -8.615850e-47 |
| Msa0602900 | Msa0929680 | 0.838403 | 2.935886e-57 | -8.615850e-47 |
| Msa0602900 | Msa0929700 | 0.929717 | 4.651438e-93 | -8.615850e-47 |
| Msa0602900 | Msa0930100 | 0.848822 | 4.796208e-60 | -8.615850e-47 |
| Msa0602900 | Msa0930360 | 0.838616 | 2.587467e-57 | -8.615850e-47 |
| Msa0602900 | Msa0930790 | 0.837889 | 3.981963e-57 | -8.615850e-47 |
| Msa0602900 | Msa0930890 | 0.897136 | 1.882782e-76 | -8.615850e-47 |
| Msa0602900 | Msa1004780 | 0.828272 | 9.859641e-55 | -8.615850e-47 |
| Msa0602900 | Msa1019110 | 0.848637 | 5.398039e-60 | -8.615850e-47 |
| Msa0602900 | Msa1025200 | 0.834787 | 2.448744e-56 | -8.615850e-47 |
| Msa0602900 | Msa1025220 | 0.829322 | 5.493668e-55 | -8.615850e-47 |
| Msa0602900 | Msa1040160 | 0.821283 | 4.383998e-53 | -8.615850e-47 |
| Msa0602900 | Msa1047020 | 0.854344 | 1.310521e-61 | -8.615850e-47 |
| Msa0602900 | Msa1050100 | 0.838154 | 3.403967e-57 | -8.615850e-47 |
| Msa0602900 | Msa1054280 | 0.842230 | 2.935110e-58 | -8.615850e-47 |
| Msa0602900 | Msa1070810 | 0.813871 | 2.055095e-51 | -8.615850e-47 |
| Msa0602900 | Msa1079910 | 0.856540 | 3.002115e-62 | -8.615850e-47 |
| Msa0602900 | Msa1082050 | 0.823525 | 1.321785e-53 | -8.615850e-47 |
| Msa0602900 | Msa1083370 | 0.831157 | 1.956933e-55 | -8.615850e-47 |
| Msa0602900 | Msa1085850 | 0.879474 | 1.210246e-69 | -8.615850e-47 |
| Msa0602900 | Msa1093500 | 0.826055 | 3.346045e-54 | -8.615850e-47 |
| Msa0602900 | Msa1116940 | 0.849846 | 2.487834e-60 | -8.615850e-47 |
| Msa0602900 | Msa1118790 | 0.808449 | 3.080086e-50 | -8.615850e-47 |
| Msa0602900 | Msa1124850 | 0.808255 | 3.387855e-50 | -8.615850e-47 |
| Msa0602900 | Msa1124980 | 0.808879 | 2.493488e-50 | -8.615850e-47 |
| Msa0602900 | Msa1126690 | 0.891282 | 4.577915e-74 | -8.615850e-47 |
| Msa0602900 | Msa1130680 | 0.827587 | 1.441105e-54 | -8.615850e-47 |
| Msa0602900 | Msa1131030 | 0.820940 | 5.257715e-53 | -8.615850e-47 |
| Msa0602900 | Msa1136880 | 0.852194 | 5.417236e-61 | -8.615850e-47 |
| Msa0602900 | Msa1144610 | 0.810473 | 1.132689e-50 | -8.615850e-47 |
| Msa0602900 | Msa1158630 | 0.814171 | 1.764869e-51 | -8.615850e-47 |
| Msa0602900 | Msa1163320 | 0.812564 | 3.979338e-51 | -8.615850e-47 |
| Msa0602900 | Msa1164150 | 0.803059 | 4.176781e-49 | -8.615850e-47 |
| Msa0602900 | Msa1165210 | 0.827963 | 1.170004e-54 | -8.615850e-47 |
| Msa0602900 | Msa1165640 | 0.818997 | 1.463399e-52 | -8.615850e-47 |
| Msa0602900 | Msa1166670 | 0.802128 | 6.498210e-49 | -8.615850e-47 |
| Msa0602900 | Msa1167360 | 0.813962 | 1.962646e-51 | -8.615850e-47 |
| Msa0602900 | Msa1180000 | 0.874849 | 4.895667e-68 | -8.615850e-47 |
| Msa0602900 | Msa1186030 | 0.818889 | 1.548758e-52 | -8.615850e-47 |
| Msa0602900 | Msa1208330 | 0.801952 | 7.063872e-49 | -8.615850e-47 |
| Msa0602900 | Msa1213850 | 0.816757 | 4.691860e-52 | -8.615850e-47 |
| Msa0602900 | Msa1219760 | 0.859501 | 3.958899e-63 | -8.615850e-47 |
| Msa0602900 | Msa1235950 | 0.918584 | 1.301688e-86 | -8.615850e-47 |
| Msa0602900 | Msa1235980 | 0.919730 | 3.124021e-87 | -8.615850e-47 |
| Msa0602900 | Msa1237040 | 0.890860 | 6.725292e-74 | -8.615850e-47 |
| Msa0602900 | Msa1240270 | 0.807542 | 4.803293e-50 | -8.615850e-47 |
| Msa0602900 | Msa1245270 | 0.805632 | 1.215602e-49 | -8.615850e-47 |
| Msa0602900 | Msa1255830 | 0.844036 | 9.695255e-59 | -8.615850e-47 |
| Msa0602900 | Msa1255850 | 0.853626 | 2.109938e-61 | -8.615850e-47 |
| Msa0602900 | Msa1258540 | 0.831866 | 1.309049e-55 | -8.615850e-47 |
| Msa0602900 | Msa1269250 | -0.817972 | 2.498879e-52 | -8.615850e-47 |
| Msa0602900 | Msa1270640 | 0.860924 | 1.470555e-63 | -8.615850e-47 |
| Msa0602900 | Msa1270710 | 0.862307 | 5.558655e-64 | -8.615850e-47 |
| Msa0602900 | Msa1278130 | 0.847297 | 1.264120e-59 | -8.615850e-47 |
| Msa0602900 | Msa1284060 | 0.825257 | 5.174326e-54 | -8.615850e-47 |
| Msa0602900 | Msa1284800 | 0.818156 | 2.270768e-52 | -8.615850e-47 |
| Msa0602900 | Msa1296090 | 0.845548 | 3.791276e-59 | -8.615850e-47 |
| Msa0602900 | Msa1316100 | 0.888073 | 8.153184e-73 | -8.615850e-47 |
| Msa0602900 | Msa1317390 | 0.895649 | 7.841834e-76 | -8.615850e-47 |
| Msa0602900 | Msa1330730 | 0.836553 | 8.749076e-57 | -8.615850e-47 |
| Msa0602900 | Msa1333370 | 0.839787 | 1.285726e-57 | -8.615850e-47 |
| Msa0602900 | Msa1341780 | 0.885868 | 5.608484e-72 | -8.615850e-47 |
| Msa0602900 | Msa1344160 | 0.804158 | 2.470335e-49 | -8.615850e-47 |
| Msa0602900 | Msa1347610 | 0.803722 | 3.043176e-49 | -8.615850e-47 |
| Msa0602900 | Msa1351020 | 0.904286 | 1.437852e-79 | -8.615850e-47 |
| Msa0602900 | Msa1351910 | 0.867742 | 1.093606e-65 | -8.615850e-47 |
| Msa0602900 | Msa1353300 | 0.810375 | 1.189374e-50 | -8.615850e-47 |
| Msa0602900 | Msa1358710 | 0.816114 | 6.533141e-52 | -8.615850e-47 |
| Msa0602900 | Msa1363910 | 0.826132 | 3.208228e-54 | -8.615850e-47 |
| Msa0602900 | Msa1367540 | 0.854651 | 1.067912e-61 | -8.615850e-47 |
| Msa0602900 | Msa1371410 | 0.847631 | 1.023483e-59 | -8.615850e-47 |
| Msa0602900 | Msa1385480 | 0.917252 | 6.653837e-86 | -8.615850e-47 |
| Msa0602900 | Msa1387750 | 0.817657 | 2.943214e-52 | -8.615850e-47 |
| Msa0602900 | Msa1390760 | 0.907687 | 3.871351e-81 | -8.615850e-47 |
| Msa0602900 | Msa1403520 | 0.852696 | 3.895772e-61 | -8.615850e-47 |
| Msa0602900 | Msa1407550 | 0.889183 | 3.042729e-73 | -8.615850e-47 |
| Msa0602900 | Msa1413570 | 0.863675 | 2.101491e-64 | -8.615850e-47 |
| Msa0602900 | Msa1415620 | 0.846361 | 2.279029e-59 | -8.615850e-47 |
| Msa0602900 | Msa1421510 | 0.840175 | 1.018761e-57 | -8.615850e-47 |
| Msa0602900 | Msa1423050 | 0.806413 | 8.327696e-50 | -8.615850e-47 |
| Msa0602900 | Msa1424570 | 0.880450 | 5.435909e-70 | -8.615850e-47 |
| Msa0602900 | Msa1425070 | 0.833981 | 3.902246e-56 | -8.615850e-47 |
| Msa0602900 | Msa1432310 | 0.875302 | 3.428549e-68 | -8.615850e-47 |
| Msa0602900 | Msa1441220 | -0.800437 | 1.442202e-48 | -8.615850e-47 |
| Msa0602900 | Msa1446410 | 0.827628 | 1.408371e-54 | -8.615850e-47 |
| Msa0602900 | Msa1446510 | 0.809089 | 2.247949e-50 | -8.615850e-47 |
| Msa0602900 | Msa1449160 | 0.813763 | 2.171174e-51 | -8.615850e-47 |
| Msa0602900 | Msa1450560 | 0.895940 | 5.942398e-76 | -8.615850e-47 |
| Msa0602900 | Msa1453530 | 0.823957 | 1.047067e-53 | -8.615850e-47 |
| Msa0602900 | Msa1462580 | 0.817861 | 2.646804e-52 | -8.615850e-47 |
| Msa0602900 | Msa1463570 | 0.870446 | 1.450480e-66 | -8.615850e-47 |
| Msa0602900 | Msa1465700 | 0.902367 | 1.042457e-78 | -8.615850e-47 |
| Msa0123290 | Msa0602900 | 0.872403 | 3.266489e-67 | -8.615850e-47 |
| Msa0127230 | Msa0602900 | 0.840817 | 6.917857e-58 | -8.615850e-47 |
| Msa0128330 | Msa0602900 | 0.877810 | 4.660910e-69 | -8.615850e-47 |
| Msa0132460 | Msa0602900 | 0.902751 | 7.035795e-79 | -8.615850e-47 |
| Msa0134580 | Msa0602900 | 0.887342 | 1.552958e-72 | -8.615850e-47 |
| Msa0144800 | Msa0602900 | 0.802702 | 4.948449e-49 | -8.615850e-47 |
| Msa0146610 | Msa0602900 | 0.814320 | 1.636387e-51 | -8.615850e-47 |
| Msa0167860 | Msa0602900 | 0.903505 | 3.235191e-79 | -8.615850e-47 |
| Msa0174580 | Msa0602900 | 0.867781 | 1.062506e-65 | -8.615850e-47 |
| Msa0182050 | Msa0602900 | 0.904544 | 1.097991e-79 | -8.615850e-47 |
| Msa0182100 | Msa0602900 | 0.907203 | 6.528453e-81 | -8.615850e-47 |
| Msa0183840 | Msa0602900 | 0.825163 | 5.443630e-54 | -8.615850e-47 |
| Msa0187810 | Msa0602900 | 0.833278 | 5.845540e-56 | -8.615850e-47 |
| Msa0188740 | Msa0602900 | 0.869010 | 4.263774e-66 | -8.615850e-47 |
| Msa0191450 | Msa0602900 | 0.828064 | 1.106455e-54 | -8.615850e-47 |
| Msa0191550 | Msa0602900 | 0.858572 | 7.514871e-63 | -8.615850e-47 |
| Msa0192300 | Msa0602900 | 0.878610 | 2.443712e-69 | -8.615850e-47 |
| Msa0194940 | Msa0602900 | 0.837860 | 4.050801e-57 | -8.615850e-47 |
| Msa0195030 | Msa0602900 | 0.816663 | 4.923136e-52 | -8.615850e-47 |
| Msa0219090 | Msa0602900 | 0.849353 | 3.415761e-60 | -8.615850e-47 |
| Msa0233550 | Msa0602900 | 0.821440 | 4.032201e-53 | -8.615850e-47 |
| Msa0235050 | Msa0602900 | 0.849125 | 3.953056e-60 | -8.615850e-47 |
| Msa0237180 | Msa0602900 | 0.824478 | 7.897206e-54 | -8.615850e-47 |
| Msa0369410 | Msa0602900 | 0.826614 | 2.462465e-54 | -8.615850e-47 |
| Msa0371490 | Msa0602900 | 0.862613 | 4.475498e-64 | -8.615850e-47 |
| Msa0376850 | Msa0602900 | 0.809615 | 1.733222e-50 | -8.615850e-47 |
| Msa0377370 | Msa0602900 | 0.880903 | 3.739132e-70 | -8.615850e-47 |
| Msa0377520 | Msa0602900 | 0.813895 | 2.030289e-51 | -8.615850e-47 |
| Msa0382670 | Msa0602900 | 0.817704 | 2.872839e-52 | -8.615850e-47 |
| Msa0382950 | Msa0602900 | 0.808177 | 3.520171e-50 | -8.615850e-47 |
| Msa0382960 | Msa0602900 | 0.805443 | 1.331745e-49 | -8.615850e-47 |
| Msa0387290 | Msa0602900 | 0.819331 | 1.228548e-52 | -8.615850e-47 |
| Msa0388520 | Msa0602900 | 0.815512 | 8.899541e-52 | -8.615850e-47 |
| Msa0416470 | Msa0602900 | 0.817736 | 2.824383e-52 | -8.615850e-47 |
| Msa0419710 | Msa0602900 | 0.809487 | 1.846903e-50 | -8.615850e-47 |
| Msa0426090 | Msa0602900 | 0.878653 | 2.360367e-69 | -8.615850e-47 |
| Msa0426250 | Msa0602900 | 0.890379 | 1.038797e-73 | -8.615850e-47 |
| Msa0426940 | Msa0602900 | 0.812619 | 3.869828e-51 | -8.615850e-47 |
| Msa0432750 | Msa0602900 | 0.841400 | 4.861413e-58 | -8.615850e-47 |
| Msa0433010 | Msa0602900 | 0.809764 | 1.610312e-50 | -8.615850e-47 |
| Msa0433060 | Msa0602900 | 0.855096 | 7.934982e-62 | -8.615850e-47 |
| Msa0450150 | Msa0602900 | 0.853248 | 2.708937e-61 | -8.615850e-47 |
| Msa0469740 | Msa0602900 | 0.800901 | 1.159387e-48 | -8.615850e-47 |
| Msa0472480 | Msa0602900 | 0.872838 | 2.338279e-67 | -8.615850e-47 |
| Msa0475810 | Msa0602900 | 0.818186 | 2.235293e-52 | -8.615850e-47 |
| Msa0479980 | Msa0602900 | 0.843724 | 1.174982e-58 | -8.615850e-47 |
| Msa0481520 | Msa0602900 | 0.819896 | 9.126686e-53 | -8.615850e-47 |
| Msa0482560 | Msa0602900 | 0.814944 | 1.190092e-51 | -8.615850e-47 |
| Msa0239420 | Msa0602900 | 0.851247 | 1.005078e-60 | -8.615850e-47 |
| Msa0264640 | Msa0602900 | 0.807828 | 4.176466e-50 | -8.615850e-47 |
| Msa0270160 | Msa0602900 | 0.895041 | 1.396798e-75 | -8.615850e-47 |
| Msa0274940 | Msa0602900 | 0.827015 | 1.975621e-54 | -8.615850e-47 |
| Msa0277600 | Msa0602900 | 0.925392 | 1.951882e-90 | -8.615850e-47 |
| Msa0281330 | Msa0602900 | 0.867806 | 1.042907e-65 | -8.615850e-47 |
| Msa0281370 | Msa0602900 | 0.880008 | 7.817665e-70 | -8.615850e-47 |
| Msa0301250 | Msa0602900 | 0.880596 | 4.819287e-70 | -8.615850e-47 |
| Msa0313060 | Msa0602900 | 0.900076 | 1.051626e-77 | -8.615850e-47 |
| Msa0315430 | Msa0602900 | 0.886811 | 2.470145e-72 | -8.615850e-47 |
| Msa0315660 | Msa0602900 | 0.825195 | 5.351134e-54 | -8.615850e-47 |
| Msa0340560 | Msa0602900 | 0.847743 | 9.531421e-60 | -8.615850e-47 |
| Msa0346090 | Msa0602900 | 0.817378 | 3.402240e-52 | -8.615850e-47 |
| Msa0363320 | Msa0602900 | 0.825778 | 3.893467e-54 | -8.615850e-47 |
| Msa0485220 | Msa0602900 | 0.824954 | 6.099165e-54 | -8.615850e-47 |
| Msa0511760 | Msa0602900 | 0.862670 | 4.299177e-64 | -8.615850e-47 |
| Msa0516830 | Msa0602900 | 0.809983 | 1.444623e-50 | -8.615850e-47 |
| Msa0517480 | Msa0602900 | 0.819731 | 9.954510e-53 | -8.615850e-47 |
| Msa0521730 | Msa0602900 | 0.855244 | 7.183425e-62 | -8.615850e-47 |
| Msa0524680 | Msa0602900 | 0.853366 | 2.505244e-61 | -8.615850e-47 |
| Msa0547920 | Msa0602900 | 0.995104 | 4.651504e-213 | -8.615850e-47 |
| Msa0550490 | Msa0602900 | 0.864263 | 1.378658e-64 | -8.615850e-47 |
| Msa0552510 | Msa0602900 | 0.836684 | 8.101938e-57 | -8.615850e-47 |
| Msa0568380 | Msa0602900 | 0.834186 | 3.466495e-56 | -8.615850e-47 |
| Msa0573550 | Msa0602900 | 0.915783 | 3.905318e-85 | -8.615850e-47 |
| Msa0574780 | Msa0602900 | 0.885957 | 5.190658e-72 | -8.615850e-47 |
| Msa0578010 | Msa0602900 | 0.852956 | 3.284430e-61 | -8.615850e-47 |
| Msa0579830 | Msa0602900 | 0.830075 | 3.601171e-55 | -8.615850e-47 |
| Msa0582070 | Msa0602900 | 0.812779 | 3.570170e-51 | -8.615850e-47 |
| Msa0585570 | Msa0602900 | 0.843675 | 1.211078e-58 | -8.615850e-47 |
| Msa0597240 | Msa0602900 | 0.891701 | 3.124804e-74 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0602900 | MtrunA17_Chr4g0030821 | 98.693 | 153 | 1 | 1 | 1 | 153 | 1 | 152 | 9.29e-104 | 293 |
| Msa0602900 | MtrunA17_Chr2g0327781 | 96.689 | 151 | 5 | 0 | 3 | 153 | 4 | 154 | 3.94e-101 | 286 |
| Msa0602900 | MtrunA17_Chr7g0222741 | 92.053 | 151 | 12 | 0 | 3 | 153 | 4 | 154 | 1.31e-67 | 202 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0602900 | AT3G55280.1 | 87.662 | 154 | 18 | 1 | 1 | 153 | 1 | 154 | 2.39e-70 | 209 |
| Msa0602900 | AT3G55280.2 | 87.662 | 154 | 18 | 1 | 1 | 153 | 1 | 154 | 2.39e-70 | 209 |
| Msa0602900 | AT2G39460.1 | 89.844 | 128 | 13 | 0 | 26 | 153 | 27 | 154 | 1.24e-66 | 199 |
| Msa0602900 | AT2G39460.2 | 89.844 | 128 | 13 | 0 | 26 | 153 | 27 | 154 | 1.24e-66 | 199 |
| Msa0602900 | AT3G55280.3 | 92.373 | 118 | 9 | 0 | 36 | 153 | 31 | 148 | 2.64e-66 | 199 |
Find 70 sgRNAs with CRISPR-Local
Find 146 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTATCCCTTGTTTGTGTCTT+TGG | 0.162619 | 4_2:-46967948 | None:intergenic |
| GCTTTCAATGCCTGTGCCTT+TGG | 0.265621 | 4_2:-46967849 | None:intergenic |
| GGCACTGATGCGAGGATATT+TGG | 0.276630 | 4_2:-46967976 | None:intergenic |
| TATCCCTTGTTTGTGTCTTT+GGG | 0.296408 | 4_2:-46967947 | None:intergenic |
| CAACCTAACATAGGCCTTCT+TGG | 0.308307 | 4_2:-46968684 | None:intergenic |
| AAACGGGTTCTAGGGTTTAC+TGG | 0.315745 | 4_2:-46966559 | None:intergenic |
| GCACTGATGCGAGGATATTT+GGG | 0.324549 | 4_2:-46967975 | None:intergenic |
| CAGAGGAAGAAACGGGTTCT+AGG | 0.325173 | 4_2:-46966568 | None:intergenic |
| TAGTGGTCAAGCTTGTTTCT+TGG | 0.344862 | 4_2:-46968002 | None:intergenic |
| CGTAAATAAATACTAAGAAT+TGG | 0.348753 | 4_2:-46968972 | None:intergenic |
| GTTCTAGGGTTTACTGGTTT+CGG | 0.359030 | 4_2:-46966553 | None:intergenic |
| TTAGATGTTAGCCAGTTCTA+TGG | 0.385659 | 4_2:+46968787 | Msa0602900:three_prime_UTR |
| GTAGTCTAGTATATATGTTT+TGG | 0.388609 | 4_2:+46969087 | Msa0602900:three_prime_UTR |
| TAGTTATTGAAGGAAACTTT+TGG | 0.390719 | 4_2:+46968810 | Msa0602900:three_prime_UTR |
| TTCATTGACAAATCATGTAA+TGG | 0.410292 | 4_2:-46969043 | None:intergenic |
| GCACAAGTCAAGATTGTTCA+TGG | 0.413155 | 4_2:-46969194 | None:intergenic |
| TTCAATAACTACCATAGAAC+TGG | 0.419006 | 4_2:-46968798 | None:intergenic |
| TTGGATGTAGCAAACAAGAT+TGG | 0.425365 | 4_2:+46968725 | Msa0602900:CDS |
| ACATCCAATGCATCGTAATC+AGG | 0.425991 | 4_2:-46968710 | None:intergenic |
| CAATGCCTGTGCCTTTGGAT+CGG | 0.450132 | 4_2:-46967844 | None:intergenic |
| AGGTGTTAACCTTCTTCGCC+TGG | 0.454264 | 4_2:-46968160 | None:intergenic |
| AGTCAGTACCTGGATTTACC+TGG | 0.469690 | 4_2:+46968757 | Msa0602900:exon |
| TGGATGTAGCAAACAAGATT+GGG | 0.476041 | 4_2:+46968726 | Msa0602900:CDS |
| GCTGCCAAGGCAGTCAAGTC+AGG | 0.480557 | 4_2:+46967870 | Msa0602900:CDS |
| GTCAAGCTTGTTTCTTGGTG+TGG | 0.490928 | 4_2:-46967997 | None:intergenic |
| GTACCAAGAAGGCCTATGTT+AGG | 0.503933 | 4_2:+46968681 | Msa0602900:CDS |
| CATAAATGCTCACCTGATCA+AGG | 0.508831 | 4_2:-46968180 | None:intergenic |
| GGAACTTCAAAATCTGATAG+TGG | 0.511992 | 4_2:-46968019 | None:intergenic |
| TTGTTTGTGTCTTTGGGCGA+TGG | 0.513342 | 4_2:-46967941 | None:intergenic |
| AGTTCTATGGTAGTTATTGA+AGG | 0.514582 | 4_2:+46968800 | Msa0602900:three_prime_UTR |
| AATTGAGGATAACAACACTT+TGG | 0.518687 | 4_2:+46968070 | Msa0602900:CDS |
| ATAGGCCTTCTTGGTACCAT+CGG | 0.519310 | 4_2:-46968675 | None:intergenic |
| TTCCTCTGCATCCACCGCGA+AGG | 0.519918 | 4_2:+46966583 | Msa0602900:five_prime_UTR |
| AGAGGAAGAAACGGGTTCTA+GGG | 0.523704 | 4_2:-46966567 | None:intergenic |
| GAAGAAAATGTATGACATCC+AGG | 0.526017 | 4_2:+46968142 | Msa0602900:CDS |
| AGAAGGTTAACACCTTGATC+AGG | 0.531796 | 4_2:+46968168 | Msa0602900:CDS |
| GACACCTGATTACGATGCAT+TGG | 0.535533 | 4_2:+46968706 | Msa0602900:CDS |
| GTGGATGCAGAGGAAGAAAC+GGG | 0.538720 | 4_2:-46966575 | None:intergenic |
| AGTGCCTGACTTGACTGCCT+TGG | 0.543420 | 4_2:-46967874 | None:intergenic |
| TAGGCCTTCTTGGTACCATC+GGG | 0.543529 | 4_2:-46968674 | None:intergenic |
| CAAAGACACAAACAAGGGAT+AGG | 0.544147 | 4_2:+46967949 | Msa0602900:CDS |
| AATAGAACCCAGGTAAATCC+AGG | 0.548065 | 4_2:-46968765 | None:intergenic |
| GGTGGATGCAGAGGAAGAAA+CGG | 0.553400 | 4_2:-46966576 | None:intergenic |
| AGGCACTGCTATTAAGAAGA+AGG | 0.555789 | 4_2:+46967890 | Msa0602900:CDS |
| GTATGACATCCAGGCGAAGA+AGG | 0.560881 | 4_2:+46968151 | Msa0602900:CDS |
| GGATCATCTAAGTCAGTACC+TGG | 0.562175 | 4_2:+46968747 | Msa0602900:exon |
| TTAATCTGTTGCAGGCCCGA+TGG | 0.562967 | 4_2:+46968659 | Msa0602900:intron |
| ACAGGCATTGAAAGCTGCCA+AGG | 0.571400 | 4_2:+46967857 | Msa0602900:CDS |
| GAAGACCGATCCAAAGGCAC+AGG | 0.572296 | 4_2:+46967839 | Msa0602900:CDS |
| GTCAGTACCTGGATTTACCT+GGG | 0.574096 | 4_2:+46968758 | Msa0602900:three_prime_UTR |
| GTCCGCAATGAAGAAAATTG+AGG | 0.580232 | 4_2:+46968055 | Msa0602900:CDS |
| GCACTGTGCACAAACCTTCG+CGG | 0.588728 | 4_2:-46966597 | None:intergenic |
| CAGGCCCGATGGTACCAAGA+AGG | 0.589470 | 4_2:+46968670 | Msa0602900:intron |
| AACCTTCGCGGTGGATGCAG+AGG | 0.590066 | 4_2:-46966585 | None:intergenic |
| TTGCGGACTCAGTGGTGAGT+GGG | 0.598322 | 4_2:-46968040 | None:intergenic |
| TTCTAAGAAGACCGATCCAA+AGG | 0.610830 | 4_2:+46967833 | Msa0602900:CDS |
| ATTGCGGACTCAGTGGTGAG+TGG | 0.611075 | 4_2:-46968041 | None:intergenic |
| TTTCTTCATTGCGGACTCAG+TGG | 0.615852 | 4_2:-46968048 | None:intergenic |
| CACTGATGCGAGGATATTTG+GGG | 0.617729 | 4_2:-46967974 | None:intergenic |
| CTTGGTGTGGCACTGATGCG+AGG | 0.626082 | 4_2:-46967984 | None:intergenic |
| TTAGCTTGACGAGGCAACTG+AGG | 0.633424 | 4_2:+46969009 | Msa0602900:three_prime_UTR |
| CATAGAATGTTAGCTTGACG+AGG | 0.635703 | 4_2:+46969000 | Msa0602900:three_prime_UTR |
| ATCAGGTGTCAACCTAACAT+AGG | 0.641379 | 4_2:-46968693 | None:intergenic |
| CTGTGCACAAACCTTCGCGG+TGG | 0.647730 | 4_2:-46966594 | None:intergenic |
| ATCGCCCAAAGACACAAACA+AGG | 0.648974 | 4_2:+46967943 | Msa0602900:CDS |
| CAAGTCAAGATTGTTCATGG+TGG | 0.660293 | 4_2:-46969191 | None:intergenic |
| CTAACATCTAAATAGAACCC+AGG | 0.693241 | 4_2:-46968775 | None:intergenic |
| TGAGTCAAAATTGAAACACA+AGG | 0.718288 | 4_2:-46968905 | None:intergenic |
| TCGCCCAAAGACACAAACAA+GGG | 0.727590 | 4_2:+46967944 | Msa0602900:CDS |
| GAGACATCAAATTTACCACA+AGG | 0.729584 | 4_2:-46969110 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATATTTTTTTCATGAATT+AGG | + | chr4_2:46966685-46966704 | Msa0602900:intron | 10.0% |
| !!! | TATATTTTTTTCATGAATTA+GGG | + | chr4_2:46966686-46966705 | Msa0602900:intron | 10.0% |
| !!! | TTTTTACTAACAAAAATGAA+TGG | - | chr4_2:46966829-46966848 | None:intergenic | 15.0% |
| !!! | TATTTTAATCAAATAATGCA+TGG | + | chr4_2:46967711-46967730 | Msa0602900:intron | 15.0% |
| !! | AATCAAATCATACATGAAAA+TGG | - | chr4_2:46966945-46966964 | None:intergenic | 20.0% |
| !!! | TCATGTATGATTTGATTTTA+AGG | + | chr4_2:46966948-46966967 | Msa0602900:intron | 20.0% |
| !!! | CTTAATTTTATAAGTTCTTC+AGG | - | chr4_2:46967154-46967173 | None:intergenic | 20.0% |
| !! | CTGAAGAACTTATAAAATTA+AGG | + | chr4_2:46967152-46967171 | Msa0602900:intron | 20.0% |
| !!! | CTTACATAAGCTATTTTTAT+AGG | + | chr4_2:46967302-46967321 | Msa0602900:intron | 20.0% |
| !! | AGCTTATGATATAACATTAA+GGG | - | chr4_2:46967600-46967619 | None:intergenic | 20.0% |
| !! | TACTAAGAATTGGAAAAATA+AGG | - | chr4_2:46968965-46968984 | None:intergenic | 20.0% |
| !! | CGTAAATAAATACTAAGAAT+TGG | - | chr4_2:46968975-46968994 | None:intergenic | 20.0% |
| ! | TGAAGAAATGAATGAAACAA+AGG | - | chr4_2:46966645-46966664 | None:intergenic | 25.0% |
| ! | AGAAAATTGAAGTTACCTTT+AGG | - | chr4_2:46966755-46966774 | None:intergenic | 25.0% |
| ! | ATTAAGGTGAAATTAGTGTA+TGG | + | chr4_2:46967168-46967187 | Msa0602900:intron | 25.0% |
| ! | GATTTACAAATTTGAGCTTA+TGG | - | chr4_2:46967212-46967231 | None:intergenic | 25.0% |
| ! | CAGCTTATGATATAACATTA+AGG | - | chr4_2:46967601-46967620 | None:intergenic | 25.0% |
| !! | GATTAATACTGATTATCCAT+AGG | + | chr4_2:46967675-46967694 | Msa0602900:intron | 25.0% |
| ! | ATCAAATAATGCATGGAATT+AGG | + | chr4_2:46967718-46967737 | Msa0602900:intron | 25.0% |
| ! | TGCTGATAAGAAAAAGATTA+AGG | + | chr4_2:46968112-46968131 | Msa0602900:CDS | 25.0% |
| ! | TACAAATTATCTCAAATGTC+AGG | - | chr4_2:46968314-46968333 | None:intergenic | 25.0% |
| !! | TTCTAGTTGAATATGTGTTT+AGG | + | chr4_2:46968444-46968463 | Msa0602900:intron | 25.0% |
| !! | TTCTAGTTGAATATGTGTTT+AGG | + | chr4_2:46968444-46968463 | Msa0602900:intron | 25.0% |
| ! | TTAATTATTATAGTTCAGCG+TGG | + | chr4_2:46968606-46968625 | Msa0602900:intron | 25.0% |
| !! | TAGTTATTGAAGGAAACTTT+TGG | + | chr4_2:46968810-46968829 | Msa0602900:three_prime_UTR | 25.0% |
| ! | TTCATTGACAAATCATGTAA+TGG | - | chr4_2:46969046-46969065 | None:intergenic | 25.0% |
| !! | GTAGTCTAGTATATATGTTT+TGG | + | chr4_2:46969087-46969106 | Msa0602900:three_prime_UTR | 25.0% |
| AATGAAACAAAGGAATTACG+AGG | - | chr4_2:46966635-46966654 | None:intergenic | 30.0% | |
| ! | CATGAATTAGGGTTTTTATC+AGG | + | chr4_2:46966697-46966716 | Msa0602900:intron | 30.0% |
| ! | TCTTTTCCATCTGCAAAAAA+TGG | + | chr4_2:46966727-46966746 | Msa0602900:exon | 30.0% |
| !!! | TTTTTTGCTCATCATAACTC+AGG | - | chr4_2:46967001-46967020 | None:intergenic | 30.0% |
| GAGTTATGATGAGCAAAAAA+AGG | + | chr4_2:46967001-46967020 | Msa0602900:intron | 30.0% | |
| ATGATGAGCAAAAAAAGGTT+AGG | + | chr4_2:46967006-46967025 | Msa0602900:intron | 30.0% | |
| AATAAGTTGCTTAACCAAAC+AGG | - | chr4_2:46967252-46967271 | None:intergenic | 30.0% | |
| ! | ATCCTCAATTTTCTTCATTG+CGG | - | chr4_2:46968060-46968079 | None:intergenic | 30.0% |
| AATTGAGGATAACAACACTT+TGG | + | chr4_2:46968070-46968089 | Msa0602900:CDS | 30.0% | |
| ATTTATGCAGTTACTGTTCA+AGG | + | chr4_2:46968196-46968215 | Msa0602900:intron | 30.0% | |
| ATGTCTGCAAAATATACTAC+TGG | - | chr4_2:46968339-46968358 | None:intergenic | 30.0% | |
| ! | TTCTAGTTGAATACGTGTTT+AGG | + | chr4_2:46968394-46968413 | Msa0602900:intron | 30.0% |
| TTAGGCATTAATACCAACAA+TGG | + | chr4_2:46968412-46968431 | Msa0602900:intron | 30.0% | |
| AGAAAACAGAAAACCATTGT+TGG | - | chr4_2:46968428-46968447 | None:intergenic | 30.0% | |
| TTAGGCATTAATACCAACAA+TGG | + | chr4_2:46968412-46968431 | Msa0602900:intron | 30.0% | |
| ! | GAATCTGGAATTAATGATCA+GGG | + | chr4_2:46968554-46968573 | Msa0602900:intron | 30.0% |
| TTCAATAACTACCATAGAAC+TGG | - | chr4_2:46968801-46968820 | None:intergenic | 30.0% | |
| AGTTCTATGGTAGTTATTGA+AGG | + | chr4_2:46968800-46968819 | Msa0602900:three_prime_UTR | 30.0% | |
| !! | TTGAAGGAAACTTTTGGAAA+AGG | + | chr4_2:46968816-46968835 | Msa0602900:three_prime_UTR | 30.0% |
| !! | TGAAGGAAACTTTTGGAAAA+GGG | + | chr4_2:46968817-46968836 | Msa0602900:three_prime_UTR | 30.0% |
| TGAGTCAAAATTGAAACACA+AGG | - | chr4_2:46968908-46968927 | None:intergenic | 30.0% | |
| AGCACATAAGCTTAAATCAG+TGG | - | chr4_2:46966792-46966811 | None:intergenic | 35.0% | |
| CTTAACCAAACAGGATGTAA+GGG | - | chr4_2:46967243-46967262 | None:intergenic | 35.0% | |
| TACGTTGTGTGAGATTGTTT+GGG | - | chr4_2:46967539-46967558 | None:intergenic | 35.0% | |
| ATACGTTGTGTGAGATTGTT+TGG | - | chr4_2:46967540-46967559 | None:intergenic | 35.0% | |
| TCAAATAAGCCAATCCAAAC+AGG | + | chr4_2:46967574-46967593 | Msa0602900:intron | 35.0% | |
| TATAACATTAAGGGCCTGTT+TGG | - | chr4_2:46967591-46967610 | None:intergenic | 35.0% | |
| ! | TACTGATTATCCATAGGCTT+TGG | + | chr4_2:46967681-46967700 | Msa0602900:intron | 35.0% |
| ATATACTGAACCAAAGCCTA+TGG | - | chr4_2:46967694-46967713 | None:intergenic | 35.0% | |
| ! | TATCCCTTGTTTGTGTCTTT+GGG | - | chr4_2:46967950-46967969 | None:intergenic | 35.0% |
| GGAACTTCAAAATCTGATAG+TGG | - | chr4_2:46968022-46968041 | None:intergenic | 35.0% | |
| GAAGAAAATGTATGACATCC+AGG | + | chr4_2:46968142-46968161 | Msa0602900:CDS | 35.0% | |
| !! | AGACATACCGAACCATTTTT+GGG | + | chr4_2:46968353-46968372 | Msa0602900:intron | 35.0% |
| CTAGAAAACAGAACCATTGT+TGG | - | chr4_2:46968478-46968497 | None:intergenic | 35.0% | |
| ! | GGAATCTGGAATTAATGATC+AGG | + | chr4_2:46968553-46968572 | Msa0602900:intron | 35.0% |
| ! | TCGACTTTTTAATCTGTTGC+AGG | + | chr4_2:46968651-46968670 | Msa0602900:intron | 35.0% |
| TTGGATGTAGCAAACAAGAT+TGG | + | chr4_2:46968725-46968744 | Msa0602900:CDS | 35.0% | |
| TGGATGTAGCAAACAAGATT+GGG | + | chr4_2:46968726-46968745 | Msa0602900:CDS | 35.0% | |
| CTAACATCTAAATAGAACCC+AGG | - | chr4_2:46968778-46968797 | None:intergenic | 35.0% | |
| TTAGATGTTAGCCAGTTCTA+TGG | + | chr4_2:46968787-46968806 | Msa0602900:three_prime_UTR | 35.0% | |
| !!! | GTATATATGTTTTGGCCTTG+TGG | + | chr4_2:46969095-46969114 | Msa0602900:three_prime_UTR | 35.0% |
| GAGACATCAAATTTACCACA+AGG | - | chr4_2:46969113-46969132 | None:intergenic | 35.0% | |
| AATTACGAGGAGAGTAGAAG+AGG | - | chr4_2:46966622-46966641 | None:intergenic | 40.0% | |
| !!! | TAGGAGCCATTTTTTGCAGA+TGG | - | chr4_2:46966736-46966755 | None:intergenic | 40.0% |
| CTGCAAAAAATGGCTCCTAA+AGG | + | chr4_2:46966737-46966756 | Msa0602900:exon | 40.0% | |
| GAGTTTGTAAGCGACTGTTT+AGG | + | chr4_2:46966970-46966989 | Msa0602900:intron | 40.0% | |
| ! | ACAGGATGTAAGGGTAGTTT+TGG | - | chr4_2:46967234-46967253 | None:intergenic | 40.0% |
| AACTACCCTTACATCCTGTT+TGG | + | chr4_2:46967235-46967254 | Msa0602900:intron | 40.0% | |
| GCTTAACCAAACAGGATGTA+AGG | - | chr4_2:46967244-46967263 | None:intergenic | 40.0% | |
| !! | CTTATGCAATGTTTTTGCGC+AGG | + | chr4_2:46967804-46967823 | Msa0602900:intron | 40.0% |
| ! | TTCTAAGAAGACCGATCCAA+AGG | + | chr4_2:46967833-46967852 | Msa0602900:CDS | 40.0% |
| ! | AGGCACTGCTATTAAGAAGA+AGG | + | chr4_2:46967890-46967909 | Msa0602900:CDS | 40.0% |
| ! | CTATCCCTTGTTTGTGTCTT+TGG | - | chr4_2:46967951-46967970 | None:intergenic | 40.0% |
| CAAAGACACAAACAAGGGAT+AGG | + | chr4_2:46967949-46967968 | Msa0602900:CDS | 40.0% | |
| ! | TAGTGGTCAAGCTTGTTTCT+TGG | - | chr4_2:46968005-46968024 | None:intergenic | 40.0% |
| GTCCGCAATGAAGAAAATTG+AGG | + | chr4_2:46968055-46968074 | Msa0602900:CDS | 40.0% | |
| AGAAGGTTAACACCTTGATC+AGG | + | chr4_2:46968168-46968187 | Msa0602900:CDS | 40.0% | |
| CATAAATGCTCACCTGATCA+AGG | - | chr4_2:46968183-46968202 | None:intergenic | 40.0% | |
| !! | TACCCTTCGCATGTTTTGTT+AGG | + | chr4_2:46968282-46968301 | Msa0602900:intron | 40.0% |
| !! | ACCCTTCGCATGTTTTGTTA+GGG | + | chr4_2:46968283-46968302 | Msa0602900:intron | 40.0% |
| ACCCTAACAAAACATGCGAA+GGG | - | chr4_2:46968287-46968306 | None:intergenic | 40.0% | |
| ! | CAGACATACCGAACCATTTT+TGG | + | chr4_2:46968352-46968371 | Msa0602900:intron | 40.0% |
| !!! | ACCGAACCATTTTTGGGTTT+TGG | + | chr4_2:46968359-46968378 | Msa0602900:intron | 40.0% |
| GCCAAAACCCAAAAATGGTT+CGG | - | chr4_2:46968363-46968382 | None:intergenic | 40.0% | |
| !!! | GAACCATTTTTGGGTTTTGG+CGG | + | chr4_2:46968362-46968381 | Msa0602900:intron | 40.0% |
| AAACCGCCAAAACCCAAAAA+TGG | - | chr4_2:46968368-46968387 | None:intergenic | 40.0% | |
| ATAGCATTGCACTGAACTGT+TGG | - | chr4_2:46968526-46968545 | None:intergenic | 40.0% | |
| AGTTCAGTGCAATGCTATCA+GGG | + | chr4_2:46968528-46968547 | Msa0602900:intron | 40.0% | |
| ATCAGGTGTCAACCTAACAT+AGG | - | chr4_2:46968696-46968715 | None:intergenic | 40.0% | |
| ACATCCAATGCATCGTAATC+AGG | - | chr4_2:46968713-46968732 | None:intergenic | 40.0% | |
| AATAGAACCCAGGTAAATCC+AGG | - | chr4_2:46968768-46968787 | None:intergenic | 40.0% | |
| ! | CATAGAATGTTAGCTTGACG+AGG | + | chr4_2:46969000-46969019 | Msa0602900:three_prime_UTR | 40.0% |
| CAAGTCAAGATTGTTCATGG+TGG | - | chr4_2:46969194-46969213 | None:intergenic | 40.0% | |
| GCACAAGTCAAGATTGTTCA+TGG | - | chr4_2:46969197-46969216 | None:intergenic | 40.0% | |
| !! | AAACGGGTTCTAGGGTTTAC+TGG | - | chr4_2:46966562-46966581 | None:intergenic | 45.0% |
| ! | AGAGGAAGAAACGGGTTCTA+GGG | - | chr4_2:46966570-46966589 | None:intergenic | 45.0% |
| CATTAAGGGCCTGTTTGGAT+TGG | - | chr4_2:46967586-46967605 | None:intergenic | 45.0% | |
| TTGTTTGTGTCTTTGGGCGA+TGG | - | chr4_2:46967944-46967963 | None:intergenic | 45.0% | |
| ATCGCCCAAAGACACAAACA+AGG | + | chr4_2:46967943-46967962 | Msa0602900:CDS | 45.0% | |
| TCGCCCAAAGACACAAACAA+GGG | + | chr4_2:46967944-46967963 | Msa0602900:CDS | 45.0% | |
| CACTGATGCGAGGATATTTG+GGG | - | chr4_2:46967977-46967996 | None:intergenic | 45.0% | |
| ! | GCACTGATGCGAGGATATTT+GGG | - | chr4_2:46967978-46967997 | None:intergenic | 45.0% |
| ! | GTCAAGCTTGTTTCTTGGTG+TGG | - | chr4_2:46968000-46968019 | None:intergenic | 45.0% |
| TTTCTTCATTGCGGACTCAG+TGG | - | chr4_2:46968051-46968070 | None:intergenic | 45.0% | |
| CACCCTAACAAAACATGCGA+AGG | - | chr4_2:46968288-46968307 | None:intergenic | 45.0% | |
| !! | CTTCGCATGTTTTGTTAGGG+TGG | + | chr4_2:46968286-46968305 | Msa0602900:intron | 45.0% |
| CAGTTCAGTGCAATGCTATC+AGG | + | chr4_2:46968527-46968546 | Msa0602900:intron | 45.0% | |
| ATGCTATCAGGGTTGGAATC+TGG | + | chr4_2:46968539-46968558 | Msa0602900:intron | 45.0% | |
| ATAGGCCTTCTTGGTACCAT+CGG | - | chr4_2:46968678-46968697 | None:intergenic | 45.0% | |
| GTACCAAGAAGGCCTATGTT+AGG | + | chr4_2:46968681-46968700 | Msa0602900:CDS | 45.0% | |
| CAACCTAACATAGGCCTTCT+TGG | - | chr4_2:46968687-46968706 | None:intergenic | 45.0% | |
| GACACCTGATTACGATGCAT+TGG | + | chr4_2:46968706-46968725 | Msa0602900:CDS | 45.0% | |
| GGATCATCTAAGTCAGTACC+TGG | + | chr4_2:46968747-46968766 | Msa0602900:exon | 45.0% | |
| AGTCAGTACCTGGATTTACC+TGG | + | chr4_2:46968757-46968776 | Msa0602900:exon | 45.0% | |
| GTCAGTACCTGGATTTACCT+GGG | + | chr4_2:46968758-46968777 | Msa0602900:three_prime_UTR | 45.0% | |
| ! | CAGAGGAAGAAACGGGTTCT+AGG | - | chr4_2:46966571-46966590 | None:intergenic | 50.0% |
| GTGGATGCAGAGGAAGAAAC+GGG | - | chr4_2:46966578-46966597 | None:intergenic | 50.0% | |
| GGTGGATGCAGAGGAAGAAA+CGG | - | chr4_2:46966579-46966598 | None:intergenic | 50.0% | |
| CAATGCCTGTGCCTTTGGAT+CGG | - | chr4_2:46967847-46967866 | None:intergenic | 50.0% | |
| GCTTTCAATGCCTGTGCCTT+TGG | - | chr4_2:46967852-46967871 | None:intergenic | 50.0% | |
| !! | ACAGGCATTGAAAGCTGCCA+AGG | + | chr4_2:46967857-46967876 | Msa0602900:CDS | 50.0% |
| !! | GGCACTGATGCGAGGATATT+TGG | - | chr4_2:46967979-46967998 | None:intergenic | 50.0% |
| GTATGACATCCAGGCGAAGA+AGG | + | chr4_2:46968151-46968170 | Msa0602900:CDS | 50.0% | |
| AGGTGTTAACCTTCTTCGCC+TGG | - | chr4_2:46968163-46968182 | None:intergenic | 50.0% | |
| CAGTGCAATGCTATCAGGGT+TGG | + | chr4_2:46968532-46968551 | Msa0602900:intron | 50.0% | |
| TTAATCTGTTGCAGGCCCGA+TGG | + | chr4_2:46968659-46968678 | Msa0602900:intron | 50.0% | |
| TAGGCCTTCTTGGTACCATC+GGG | - | chr4_2:46968677-46968696 | None:intergenic | 50.0% | |
| ! | TTAGCTTGACGAGGCAACTG+AGG | + | chr4_2:46969009-46969028 | Msa0602900:three_prime_UTR | 50.0% |
| GCACTGTGCACAAACCTTCG+CGG | - | chr4_2:46966600-46966619 | None:intergenic | 55.0% | |
| ! | GAAGACCGATCCAAAGGCAC+AGG | + | chr4_2:46967839-46967858 | Msa0602900:CDS | 55.0% |
| ! | AGTGCCTGACTTGACTGCCT+TGG | - | chr4_2:46967877-46967896 | None:intergenic | 55.0% |
| TTGCGGACTCAGTGGTGAGT+GGG | - | chr4_2:46968043-46968062 | None:intergenic | 55.0% | |
| ATTGCGGACTCAGTGGTGAG+TGG | - | chr4_2:46968044-46968063 | None:intergenic | 55.0% | |
| TTCCTCTGCATCCACCGCGA+AGG | + | chr4_2:46966583-46966602 | Msa0602900:five_prime_UTR | 60.0% | |
| AACCTTCGCGGTGGATGCAG+AGG | - | chr4_2:46966588-46966607 | None:intergenic | 60.0% | |
| CTGTGCACAAACCTTCGCGG+TGG | - | chr4_2:46966597-46966616 | None:intergenic | 60.0% | |
| GCTGCCAAGGCAGTCAAGTC+AGG | + | chr4_2:46967870-46967889 | Msa0602900:CDS | 60.0% | |
| !! | CTTGGTGTGGCACTGATGCG+AGG | - | chr4_2:46967987-46968006 | None:intergenic | 60.0% |
| CAGGCCCGATGGTACCAAGA+AGG | + | chr4_2:46968670-46968689 | Msa0602900:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 46966556 | 46969224 | 46966556 | ID=Msa0602900;Name=Msa0602900 |
| chr4_2 | mRNA | 46966556 | 46969224 | 46966556 | ID=Msa0602900-mRNA-1;Parent=Msa0602900;Name=Msa0602900-mRNA-1;_AED=0.02;_eAED=0.02;_QI=88|1|1|1|0.66|0.5|4|467|153 |
| chr4_2 | exon | 46966556 | 46966604 | 46966556 | ID=Msa0602900-mRNA-1:exon:10685;Parent=Msa0602900-mRNA-1 |
| chr4_2 | exon | 46966707 | 46966758 | 46966707 | ID=Msa0602900-mRNA-1:exon:10686;Parent=Msa0602900-mRNA-1 |
| chr4_2 | exon | 46967826 | 46968189 | 46967826 | ID=Msa0602900-mRNA-1:exon:10687;Parent=Msa0602900-mRNA-1 |
| chr4_2 | exon | 46968673 | 46969224 | 46968673 | ID=Msa0602900-mRNA-1:exon:10688;Parent=Msa0602900-mRNA-1 |
| chr4_2 | five_prime_UTR | 46966556 | 46966604 | 46966556 | ID=Msa0602900-mRNA-1:five_prime_utr;Parent=Msa0602900-mRNA-1 |
| chr4_2 | five_prime_UTR | 46966707 | 46966745 | 46966707 | ID=Msa0602900-mRNA-1:five_prime_utr;Parent=Msa0602900-mRNA-1 |
| chr4_2 | CDS | 46966746 | 46966758 | 46966746 | ID=Msa0602900-mRNA-1:cds;Parent=Msa0602900-mRNA-1 |
| chr4_2 | CDS | 46967826 | 46968189 | 46967826 | ID=Msa0602900-mRNA-1:cds;Parent=Msa0602900-mRNA-1 |
| chr4_2 | CDS | 46968673 | 46968757 | 46968673 | ID=Msa0602900-mRNA-1:cds;Parent=Msa0602900-mRNA-1 |
| chr4_2 | three_prime_UTR | 46968758 | 46969224 | 46968758 | ID=Msa0602900-mRNA-1:three_prime_utr;Parent=Msa0602900-mRNA-1 |
| Gene Sequence |
| Protein sequence |
