Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0476790 | XP_003603340.2 | 95.682 | 579 | 21 | 1 | 1 | 579 | 1 | 575 | 0.0 | 1085 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0476790 | G7JAF2 | 95.682 | 579 | 21 | 1 | 1 | 579 | 1 | 575 | 0.0 | 1085 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0092950 | Msa0476790 | 0.989807 | 9.831651e-180 | -8.615850e-47 |
Msa0432690 | Msa0476790 | 0.809492 | 1.841928e-50 | -8.615850e-47 |
Msa0464050 | Msa0476790 | 0.815675 | 8.185946e-52 | -8.615850e-47 |
Msa0466520 | Msa0476790 | 0.808726 | 2.688464e-50 | -8.615850e-47 |
Msa0476790 | Msa0513080 | 0.805773 | 1.135156e-49 | -8.615850e-47 |
Msa0476790 | Msa0521170 | 0.988819 | 1.537700e-175 | -8.615850e-47 |
Msa0476790 | Msa0521320 | 0.827720 | 1.338933e-54 | -8.615850e-47 |
Msa0476790 | Msa0557850 | 0.807815 | 4.204083e-50 | -8.615850e-47 |
Msa0476790 | Msa0612520 | 0.815976 | 7.013582e-52 | -8.615850e-47 |
Msa0476790 | Msa0653160 | 0.814294 | 1.658131e-51 | -8.615850e-47 |
Msa0476790 | Msa0829080 | 0.996648 | 2.657031e-230 | -8.615850e-47 |
Msa0476790 | Msa1046120 | 0.808592 | 2.871949e-50 | -8.615850e-47 |
Msa0476790 | Msa1076820 | 0.800235 | 1.584896e-48 | -8.615850e-47 |
Msa0476790 | Msa1079640 | 0.812959 | 3.260114e-51 | -8.615850e-47 |
Msa0476790 | Msa1091050 | 0.811311 | 7.460714e-51 | -8.615850e-47 |
Msa0476790 | Msa1124470 | 0.810585 | 1.071592e-50 | -8.615850e-47 |
Msa0476790 | Msa1133970 | 0.812109 | 5.001160e-51 | -8.615850e-47 |
Msa0476790 | Msa1134040 | 0.812876 | 3.399597e-51 | -8.615850e-47 |
Msa0476790 | Msa1342810 | 0.803355 | 3.626346e-49 | -8.615850e-47 |
Msa0476790 | Msa1377530 | 0.805609 | 1.228784e-49 | -8.615850e-47 |
Msa0476790 | Msa1406720 | 0.801446 | 8.968613e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0476790 | MtrunA17_Chr3g0137351 | 95.682 | 579 | 21 | 1 | 1 | 579 | 1 | 575 | 0.0 | 1085 |
Msa0476790 | MtrunA17_Chr2g0304631 | 61.588 | 466 | 179 | 0 | 59 | 524 | 59 | 524 | 0.0 | 588 |
Msa0476790 | MtrunA17_Chr1g0208531 | 43.460 | 474 | 265 | 3 | 53 | 525 | 62 | 533 | 1.09e-139 | 416 |
Msa0476790 | MtrunA17_Chr4g0065031 | 44.578 | 249 | 137 | 1 | 58 | 306 | 67 | 314 | 9.87e-65 | 214 |
Msa0476790 | MtrunA17_Chr4g0065021 | 45.972 | 211 | 108 | 1 | 315 | 525 | 1 | 205 | 2.56e-60 | 199 |
Msa0476790 | MtrunA17_Chr2g0329621 | 23.579 | 475 | 307 | 12 | 67 | 517 | 44 | 486 | 2.10e-40 | 154 |
Msa0476790 | MtrunA17_Chr5g0401081 | 23.191 | 470 | 302 | 17 | 70 | 511 | 42 | 480 | 3.38e-18 | 87.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0476790 | AT2G25270.1 | 58.442 | 462 | 192 | 0 | 58 | 519 | 66 | 527 | 0.0 | 605 |
Msa0476790 | AT2G12400.1 | 59.494 | 474 | 192 | 0 | 51 | 524 | 54 | 527 | 0.0 | 570 |
Msa0476790 | AT1G80540.1 | 44.008 | 509 | 265 | 4 | 21 | 525 | 39 | 531 | 1.17e-136 | 408 |
Msa0476790 | AT1G80540.3 | 46.154 | 468 | 248 | 3 | 62 | 525 | 18 | 485 | 2.66e-135 | 403 |
Msa0476790 | AT1G71110.1 | 41.729 | 532 | 284 | 9 | 14 | 528 | 14 | 536 | 6.22e-134 | 402 |
Msa0476790 | AT1G80540.2 | 45.623 | 377 | 203 | 2 | 151 | 525 | 2 | 378 | 1.02e-106 | 326 |
Msa0476790 | AT5G67550.1 | 23.593 | 462 | 312 | 16 | 67 | 504 | 35 | 479 | 4.90e-25 | 109 |
Find 142 sgRNAs with CRISPR-Local
Find 512 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATATATCCTTGTCACCTTTC+AGG | 0.139855 | 3_3:-80703976 | None:intergenic |
TGATGTTCTCCTTGATCTTT+TGG | 0.146015 | 3_3:+80703745 | Msa0476790:CDS |
CATTTATTCCAGCGGATATT+TGG | 0.187146 | 3_3:-80703563 | None:intergenic |
TATAGTAAATTGATTTATAT+TGG | 0.209299 | 3_3:+80703699 | Msa0476790:CDS |
CTTGTCACCTTTCAGGGATA+TGG | 0.218444 | 3_3:-80703969 | None:intergenic |
TGAACAATATGAGGAGAATA+AGG | 0.239883 | 3_3:-80701318 | None:intergenic |
TTCCGTGTGATGCAGGTATA+TGG | 0.256029 | 3_3:+80703468 | Msa0476790:intron |
AGCGGATATTTGGTTATAAA+AGG | 0.257211 | 3_3:-80703553 | None:intergenic |
ATGCTAGTATTGACGTTTCT+TGG | 0.262824 | 3_3:+80701840 | Msa0476790:CDS |
GGAACAAACCACATAATATA+AGG | 0.268760 | 3_3:-80702223 | None:intergenic |
GCAGGATGGTTTCTTGTTAC+TGG | 0.271995 | 3_3:+80702197 | Msa0476790:CDS |
GTAGTACAGCGGCGTAAAAT+TGG | 0.276338 | 3_3:-80702663 | None:intergenic |
ACTAGTAGTAAGAATTTAAA+TGG | 0.285203 | 3_3:+80704091 | Msa0476790:three_prime_UTR |
ATATCAGTGACCGTCATTAT+TGG | 0.295949 | 3_3:+80700767 | Msa0476790:CDS |
GCAGTCTGGTTCTTAGGCTT+TGG | 0.311251 | 3_3:+80701211 | Msa0476790:CDS |
AAACTTACTTGTGGAGAATA+AGG | 0.324746 | 3_3:-80702244 | None:intergenic |
CTGTATTTGCAGTAGGATAT+TGG | 0.332325 | 3_3:-80702505 | None:intergenic |
GATTTATATTGGATTAATAA+TGG | 0.334317 | 3_3:+80703710 | Msa0476790:CDS |
CTCGTGTCTGATTCTTTATC+CGG | 0.336847 | 3_3:-80704158 | None:intergenic |
ATTGCAGCAGTCTGGTTCTT+AGG | 0.348182 | 3_3:+80701205 | Msa0476790:CDS |
TAGTACAGCGGCGTAAAATT+GGG | 0.367058 | 3_3:-80702662 | None:intergenic |
TATATCCTTGTCACCTTTCA+GGG | 0.377226 | 3_3:-80703975 | None:intergenic |
TATCAGTGACCGTCATTATT+GGG | 0.381706 | 3_3:+80700768 | Msa0476790:CDS |
TGTCGTAAAACCGAGCCTTA+TGG | 0.388594 | 3_3:+80701268 | Msa0476790:CDS |
CGATGGGGCATAATTATATA+AGG | 0.389069 | 3_3:-80703595 | None:intergenic |
TCCTTGTCACAACTCACTTC+AGG | 0.391449 | 3_3:+80700368 | Msa0476790:CDS |
AGTGGAAGAGTGACATAGTA+AGG | 0.409592 | 3_3:-80700336 | None:intergenic |
TTGTCACCTTTCAGGGATAT+GGG | 0.414216 | 3_3:-80703968 | None:intergenic |
TATTCAGCATTGCAGCAGTC+TGG | 0.424528 | 3_3:+80701197 | Msa0476790:CDS |
GGATGTGCAGTGCTATATAT+TGG | 0.430073 | 3_3:+80701438 | Msa0476790:CDS |
CGTCTTGTTGGTGCAGGTGC+AGG | 0.435124 | 3_3:-80703876 | None:intergenic |
ATATGGGAACTTTGTGTGCC+AGG | 0.442707 | 3_3:+80703485 | Msa0476790:CDS |
AGTTCAAGTGCATGACTTGA+TGG | 0.451478 | 3_3:-80703942 | None:intergenic |
ACTGGCACCCTTATATTATG+TGG | 0.460712 | 3_3:+80702215 | Msa0476790:CDS |
ATATTGGATCCACTCATTCA+TGG | 0.460754 | 3_3:-80702489 | None:intergenic |
ACAGATATCAATGCTTCTGC+TGG | 0.461889 | 3_3:+80701636 | Msa0476790:CDS |
GAACAAACCACATAATATAA+GGG | 0.462102 | 3_3:-80702222 | None:intergenic |
TGCTGTGGCTTTGTCCACAC+AGG | 0.463296 | 3_3:-80702546 | None:intergenic |
AACATAAAGTGGAGAAAGAA+TGG | 0.463953 | 3_3:-80700243 | None:intergenic |
GGTGTAGGTGCACGTCTTGT+TGG | 0.466169 | 3_3:-80703855 | None:intergenic |
TTACCTTGCTCAAGCTAAGC+TGG | 0.468609 | 3_3:+80701554 | Msa0476790:CDS |
AGAAGAAAAGATCCACTTGA+TGG | 0.469125 | 3_3:+80700718 | Msa0476790:CDS |
AGGTAGGGGTTAAACGTCCT+TGG | 0.469945 | 3_3:-80703533 | None:intergenic |
GGTGTAAGTGCAAGTCTTGT+TGG | 0.470877 | 3_3:-80703921 | None:intergenic |
TGACAAGGAAGAAGAAGAAG+TGG | 0.471078 | 3_3:-80700354 | None:intergenic |
TGAACTGGAAAAGGAGAATC+CGG | 0.471494 | 3_3:+80704139 | Msa0476790:three_prime_UTR |
CAACAATGTTTCTTGTGCTG+TGG | 0.471860 | 3_3:-80702561 | None:intergenic |
GTACCTGTGTGGCGTTGCTT+AGG | 0.484831 | 3_3:-80702772 | None:intergenic |
GATATTTGGTTATAAAAGGT+AGG | 0.486319 | 3_3:-80703549 | None:intergenic |
TGTGTGTGTGGGAGAGAAAG+AGG | 0.492504 | 3_3:-80700160 | None:intergenic |
GACCGTGATGCGGCATCAAA+GGG | 0.492792 | 3_3:-80704242 | None:intergenic |
CTCTCTGCAGCTAAGGGAAG+TGG | 0.497169 | 3_3:-80700691 | None:intergenic |
TCTAGTTCTCTCTGCAGCTA+AGG | 0.498856 | 3_3:-80700698 | None:intergenic |
GAACAATATGAGGAGAATAA+GGG | 0.501658 | 3_3:-80701317 | None:intergenic |
AACTTCTGAACTAGTTAACT+TGG | 0.502064 | 3_3:+80702598 | Msa0476790:CDS |
ATATTTGGTTATAAAAGGTA+GGG | 0.504148 | 3_3:-80703548 | None:intergenic |
GGGAAAGAAAATGAGGGAAA+TGG | 0.506714 | 3_3:+80700616 | Msa0476790:intron |
ATATCTGTTTGAACATTAGC+GGG | 0.507500 | 3_3:-80701600 | None:intergenic |
AGACCGTGATGCGGCATCAA+AGG | 0.510081 | 3_3:-80704243 | None:intergenic |
TGAAAGTTAGAAACATAAAG+TGG | 0.510317 | 3_3:-80700254 | None:intergenic |
GGAAGTGGTGAGTTCTCATA+TGG | 0.510395 | 3_3:-80700676 | None:intergenic |
AGTGCAGGTGCACGTCTTGT+TGG | 0.512032 | 3_3:-80703888 | None:intergenic |
TCCGTGTGATGCAGGTATAT+GGG | 0.515336 | 3_3:+80703469 | Msa0476790:intron |
TAGAGACATTAGTAATAACT+TGG | 0.516630 | 3_3:-80702625 | None:intergenic |
TTATAAATGTGAACAATATG+AGG | 0.516953 | 3_3:-80701327 | None:intergenic |
GGTAGGGGTTAAACGTCCTT+GGG | 0.518838 | 3_3:-80703532 | None:intergenic |
ATGAACATTGTCCTGGTCTA+CGG | 0.519643 | 3_3:+80703673 | Msa0476790:CDS |
AACTTGGTACCACTGGCAAA+TGG | 0.520300 | 3_3:-80700194 | None:intergenic |
TAACTCAAACTTGGTACCAC+TGG | 0.520920 | 3_3:-80700201 | None:intergenic |
GGTGCACGTCTTGTTGGTGC+AGG | 0.521105 | 3_3:-80703882 | None:intergenic |
GAGGAGTGGCATCAAGGGAC+CGG | 0.522360 | 3_3:-80702693 | None:intergenic |
TATGTTGAAGAATAACCATA+AGG | 0.524244 | 3_3:-80701283 | None:intergenic |
GTTGGTGCAGGTGCAAGTGC+AGG | 0.524450 | 3_3:-80703903 | None:intergenic |
AAAGGGATTATGTTTGAGCT+AGG | 0.525254 | 3_3:-80704225 | None:intergenic |
CACTGTTTGCCATTTGCCAG+TGG | 0.528837 | 3_3:+80700185 | Msa0476790:five_prime_UTR |
GTTGGTGCAGGTGCAGGTGT+AGG | 0.529964 | 3_3:-80703870 | None:intergenic |
CATTGTCTATCTGTCATGTC+AGG | 0.531193 | 3_3:-80702731 | None:intergenic |
GGCTTCAATAAATACATAAG+TGG | 0.531993 | 3_3:+80700739 | Msa0476790:CDS |
CTTGCTCAAGCTAAGCTGGT+TGG | 0.532960 | 3_3:+80701558 | Msa0476790:CDS |
TCGCAGAGGAGTGGCATCAA+GGG | 0.535332 | 3_3:-80702698 | None:intergenic |
GTGTATTCTTAACTCAAACT+TGG | 0.536382 | 3_3:-80700210 | None:intergenic |
ACTGCTGCAATGCTGAATAC+AGG | 0.538751 | 3_3:-80701193 | None:intergenic |
TAAAACATCATTTATCAATG+AGG | 0.539307 | 3_3:-80704008 | None:intergenic |
CTAGTTCTCTCTGCAGCTAA+GGG | 0.540598 | 3_3:-80700697 | None:intergenic |
ATCGCAGAGGAGTGGCATCA+AGG | 0.541147 | 3_3:-80702699 | None:intergenic |
AACATCGACGTTGCAATATG+TGG | 0.549172 | 3_3:+80701485 | Msa0476790:CDS |
TGTGAATGTTTCTCGAACAA+AGG | 0.550831 | 3_3:-80703640 | None:intergenic |
AATATCTGTTTGAACATTAG+CGG | 0.550951 | 3_3:-80701601 | None:intergenic |
ATATACAATGAACATTGTCC+TGG | 0.555015 | 3_3:+80703666 | Msa0476790:CDS |
TCAATAAATACATAAGTGGA+TGG | 0.556341 | 3_3:+80700743 | Msa0476790:CDS |
CTTGTAGCTCAACAAGCGAT+GGG | 0.562399 | 3_3:-80703611 | None:intergenic |
GATTATGTTTGAGCTAGGAC+CGG | 0.564430 | 3_3:-80704220 | None:intergenic |
AGTGCAAGTCTTGTTGGTGC+AGG | 0.565751 | 3_3:-80703915 | None:intergenic |
TGGGTCATGCATATCTCTGA+TGG | 0.568666 | 3_3:-80703513 | None:intergenic |
TATTTGGTTATAAAAGGTAG+GGG | 0.569300 | 3_3:-80703547 | None:intergenic |
TCTTGTAGCTCAACAAGCGA+TGG | 0.573873 | 3_3:-80703612 | None:intergenic |
GGTGCACGTCTTGTTGGTGC+AGG | 0.574585 | 3_3:-80703849 | None:intergenic |
GTGAGCCTGATACAGGAGGC+TGG | 0.576237 | 3_3:+80701794 | Msa0476790:intron |
ATATCCGCTGGAATAAATGT+TGG | 0.576568 | 3_3:+80703567 | Msa0476790:CDS |
AATTGCAGCTTGGTAATCGC+AGG | 0.576626 | 3_3:+80702179 | Msa0476790:intron |
CAGATATCAATGCTTCTGCT+GGG | 0.577740 | 3_3:+80701637 | Msa0476790:CDS |
TCGAGAGCTGTATTTGCAGT+AGG | 0.579126 | 3_3:-80702512 | None:intergenic |
TTTCCAGGGAAAGAAAATGA+GGG | 0.581174 | 3_3:+80700610 | Msa0476790:intron |
TATTTATTGAAGCCATCAAG+TGG | 0.584127 | 3_3:-80700730 | None:intergenic |
ATACACACCCCAAAAGATCA+AGG | 0.584372 | 3_3:-80703754 | None:intergenic |
CCGCTGTACTACAATCAATC+CGG | 0.592455 | 3_3:+80702674 | Msa0476790:CDS |
AGTACAGCGGCGTAAAATTG+GGG | 0.593342 | 3_3:-80702661 | None:intergenic |
TTACTATAATGCCGTAGACC+AGG | 0.595943 | 3_3:-80703684 | None:intergenic |
TGAAGAATAACCATAAGGCT+CGG | 0.600991 | 3_3:-80701278 | None:intergenic |
CAACCAGCTTAGCTTGAGCA+AGG | 0.602100 | 3_3:-80701557 | None:intergenic |
GTTGGTGCAGGAGCTCGTGT+AGG | 0.611574 | 3_3:-80703837 | None:intergenic |
ATATCTCTGATGGTGAAACC+TGG | 0.616906 | 3_3:-80703503 | None:intergenic |
TCTGTCATGTCAGGACGGAA+CGG | 0.617776 | 3_3:-80702722 | None:intergenic |
TAGGTTTGATGTATTTGCTG+CGG | 0.619393 | 3_3:+80700651 | Msa0476790:CDS |
GTCTATCTGTCATGTCAGGA+CGG | 0.620648 | 3_3:-80702727 | None:intergenic |
ACAGATAGACAATGTGACTC+TGG | 0.622158 | 3_3:+80702740 | Msa0476790:CDS |
GCAAACAGTGAGTGTGTGTG+TGG | 0.623319 | 3_3:-80700172 | None:intergenic |
GCAGCTTGGTAATCGCAGGA+TGG | 0.623748 | 3_3:+80702183 | Msa0476790:intron |
CATGTGTAGCCATGAATGAG+TGG | 0.627764 | 3_3:+80702480 | Msa0476790:CDS |
GAACCTAAGCAACGCCACAC+AGG | 0.630361 | 3_3:+80702769 | Msa0476790:CDS |
CATATCCCTGAAAGGTGACA+AGG | 0.630948 | 3_3:+80703970 | Msa0476790:exon |
AGGTTACAGCCCAATAATGA+CGG | 0.632883 | 3_3:-80700777 | None:intergenic |
GCTGTGGCTTTGTCCACACA+GGG | 0.637372 | 3_3:-80702545 | None:intergenic |
ATTTCACTTACATGTACACA+AGG | 0.639891 | 3_3:-80702012 | None:intergenic |
GTATCAAGCTGATTCTGCTG+TGG | 0.640686 | 3_3:+80701509 | Msa0476790:CDS |
GGGGTGTGTATGGAAGAGAG+CGG | 0.642171 | 3_3:+80703766 | Msa0476790:CDS |
ACCTGAAGTGAGTTGTGACA+AGG | 0.644198 | 3_3:-80700369 | None:intergenic |
ACTTAGCCCATATCCCTGAA+AGG | 0.648925 | 3_3:+80703962 | Msa0476790:exon |
CGGAACGGATCGCAGAGGAG+TGG | 0.649357 | 3_3:-80702707 | None:intergenic |
GACAGAAGTAACAAACAATG+AGG | 0.650146 | 3_3:-80701249 | None:intergenic |
GTTACCAACATTTATTCCAG+CGG | 0.668217 | 3_3:-80703571 | None:intergenic |
CGACGATATACTGCCCTGTG+TGG | 0.675578 | 3_3:+80702532 | Msa0476790:CDS |
GTACAGCGGCGTAAAATTGG+GGG | 0.677666 | 3_3:-80702660 | None:intergenic |
TCAGAGATATGCATGACCCA+AGG | 0.692493 | 3_3:+80703516 | Msa0476790:CDS |
CATTCAATTATGTACCTGTG+TGG | 0.698431 | 3_3:-80702783 | None:intergenic |
TTGTAGCTCAACAAGCGATG+GGG | 0.699834 | 3_3:-80703610 | None:intergenic |
TGTTCAAACAGATATTGATG+CGG | 0.701433 | 3_3:+80701608 | Msa0476790:CDS |
GCAGTGCTATATATTGGACA+AGG | 0.702087 | 3_3:+80701444 | Msa0476790:CDS |
GTGTGTATGGAAGAGAGCGG+AGG | 0.703717 | 3_3:+80703769 | Msa0476790:CDS |
CAAACAGTGAGTGTGTGTGT+GGG | 0.704255 | 3_3:-80700171 | None:intergenic |
CAGGACGGAACGGATCGCAG+AGG | 0.716395 | 3_3:-80702712 | None:intergenic |
CCGGATTGATTGTAGTACAG+CGG | 0.723016 | 3_3:-80702674 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AACATATCTATAAAATTATA+TGG | - | chr3_3:80702305-80702324 | None:intergenic | 10.0% |
!!! | TATAGTAAATTGATTTATAT+TGG | + | chr3_3:80703699-80703718 | Msa0476790:CDS | 10.0% |
!! | AACATATCTATAAAATTATA+TGG | - | chr3_3:80702305-80702324 | None:intergenic | 10.0% |
!!! | TATAGTAAATTGATTTATAT+TGG | + | chr3_3:80703699-80703718 | Msa0476790:CDS | 10.0% |
!! | TTAATTATCGTTGTTAATTA+AGG | + | chr3_3:80700838-80700857 | Msa0476790:intron | 15.0% |
!!! | GGTATTTTATGAATTTTTTT+TGG | - | chr3_3:80703105-80703124 | None:intergenic | 15.0% |
!! | GGATATATTTATGTAAAATT+TGG | - | chr3_3:80703303-80703322 | None:intergenic | 15.0% |
!! | GATATAAAATGATTTATGTT+TGG | - | chr3_3:80703324-80703343 | None:intergenic | 15.0% |
!! | GATTTATATTGGATTAATAA+TGG | + | chr3_3:80703710-80703729 | Msa0476790:CDS | 15.0% |
!!! | GATTATTATTTTTTCTGTAT+TGG | + | chr3_3:80704041-80704060 | Msa0476790:three_prime_UTR | 15.0% |
!! | TTAATTATCGTTGTTAATTA+AGG | + | chr3_3:80700838-80700857 | Msa0476790:intron | 15.0% |
!!! | GGTATTTTATGAATTTTTTT+TGG | - | chr3_3:80703105-80703124 | None:intergenic | 15.0% |
!! | GGATATATTTATGTAAAATT+TGG | - | chr3_3:80703303-80703322 | None:intergenic | 15.0% |
!! | GATATAAAATGATTTATGTT+TGG | - | chr3_3:80703324-80703343 | None:intergenic | 15.0% |
!! | GATTTATATTGGATTAATAA+TGG | + | chr3_3:80703710-80703729 | Msa0476790:CDS | 15.0% |
!!! | GATTATTATTTTTTCTGTAT+TGG | + | chr3_3:80704041-80704060 | Msa0476790:three_prime_UTR | 15.0% |
!! | AAAAGAAAAAAAGTTAAGCA+AGG | - | chr3_3:80700536-80700555 | None:intergenic | 20.0% |
!!! | AATTTTGGACAACTAATTTT+TGG | + | chr3_3:80700913-80700932 | Msa0476790:intron | 20.0% |
!! | AAAATTCAATACCAACTAAA+AGG | - | chr3_3:80701102-80701121 | None:intergenic | 20.0% |
!! | TTATAAATGTGAACAATATG+AGG | - | chr3_3:80701330-80701349 | None:intergenic | 20.0% |
!!! | ACAATTTCTTATTGTTATTG+AGG | + | chr3_3:80701894-80701913 | Msa0476790:intron | 20.0% |
!! | GGTGATAATTAAAATTTATG+TGG | - | chr3_3:80702380-80702399 | None:intergenic | 20.0% |
!! | TTTAATTATATTAGAATGGG+TGG | - | chr3_3:80703078-80703097 | None:intergenic | 20.0% |
!! | ATATTTGGTTATAAAAGGTA+GGG | - | chr3_3:80703551-80703570 | None:intergenic | 20.0% |
!! | TAAAACATCATTTATCAATG+AGG | - | chr3_3:80704011-80704030 | None:intergenic | 20.0% |
!! | ACTAGTAGTAAGAATTTAAA+TGG | + | chr3_3:80704091-80704110 | Msa0476790:three_prime_UTR | 20.0% |
!!! | TATTTTATATGAACTGGAAA+AGG | + | chr3_3:80704130-80704149 | Msa0476790:three_prime_UTR | 20.0% |
!! | AAAAGAAAAAAAGTTAAGCA+AGG | - | chr3_3:80700536-80700555 | None:intergenic | 20.0% |
!!! | AATTTTGGACAACTAATTTT+TGG | + | chr3_3:80700913-80700932 | Msa0476790:intron | 20.0% |
!! | AAAATTCAATACCAACTAAA+AGG | - | chr3_3:80701102-80701121 | None:intergenic | 20.0% |
!! | TTATAAATGTGAACAATATG+AGG | - | chr3_3:80701330-80701349 | None:intergenic | 20.0% |
!!! | ACAATTTCTTATTGTTATTG+AGG | + | chr3_3:80701894-80701913 | Msa0476790:intron | 20.0% |
!! | GGTGATAATTAAAATTTATG+TGG | - | chr3_3:80702380-80702399 | None:intergenic | 20.0% |
!! | TTTAATTATATTAGAATGGG+TGG | - | chr3_3:80703078-80703097 | None:intergenic | 20.0% |
!! | ATATTTGGTTATAAAAGGTA+GGG | - | chr3_3:80703551-80703570 | None:intergenic | 20.0% |
!! | TAAAACATCATTTATCAATG+AGG | - | chr3_3:80704011-80704030 | None:intergenic | 20.0% |
!! | ACTAGTAGTAAGAATTTAAA+TGG | + | chr3_3:80704091-80704110 | Msa0476790:three_prime_UTR | 20.0% |
!!! | TATTTTATATGAACTGGAAA+AGG | + | chr3_3:80704130-80704149 | Msa0476790:three_prime_UTR | 20.0% |
! | TGAAAGTTAGAAACATAAAG+TGG | - | chr3_3:80700257-80700276 | None:intergenic | 25.0% |
!!! | CATTATTTTTTAGACAATGC+AGG | + | chr3_3:80700480-80700499 | Msa0476790:intron | 25.0% |
!!! | CTTTTCTTTTCATTTTTCCA+GGG | + | chr3_3:80700596-80700615 | Msa0476790:intron | 25.0% |
! | TCAATAAATACATAAGTGGA+TGG | + | chr3_3:80700743-80700762 | Msa0476790:CDS | 25.0% |
!! | GAACAAATTTTATTGAGCAA+GGG | - | chr3_3:80700810-80700829 | None:intergenic | 25.0% |
!! | AGAACAAATTTTATTGAGCA+AGG | - | chr3_3:80700811-80700830 | None:intergenic | 25.0% |
! | TCTATTATAACTGTGTTAAC+CGG | - | chr3_3:80700961-80700980 | None:intergenic | 25.0% |
! | GTTAACACAGTTATAATAGA+TGG | + | chr3_3:80700961-80700980 | Msa0476790:intron | 25.0% |
! | GTATATTCATTAAGCATCTA+AGG | - | chr3_3:80700998-80701017 | None:intergenic | 25.0% |
!! | ACACTTATTAACCATGATTT+TGG | + | chr3_3:80701027-80701046 | Msa0476790:intron | 25.0% |
! | ATTTGAACACCTGAAAATTA+TGG | - | chr3_3:80701063-80701082 | None:intergenic | 25.0% |
! | TATGTTGAAGAATAACCATA+AGG | - | chr3_3:80701286-80701305 | None:intergenic | 25.0% |
!!! | TTTCTATTCCTTTGTTTTTC+TGG | + | chr3_3:80701367-80701386 | Msa0476790:intron | 25.0% |
! | AATATCTGTTTGAACATTAG+CGG | - | chr3_3:80701604-80701623 | None:intergenic | 25.0% |
!! | TATACAGTGTTCTCAATTTT+CGG | + | chr3_3:80701980-80701999 | Msa0476790:intron | 25.0% |
!! | AAAGAGTATATAAGTGTAAG+TGG | - | chr3_3:80702047-80702066 | None:intergenic | 25.0% |
! | TAAAATGGTGCGTATAAAAA+GGG | - | chr3_3:80702074-80702093 | None:intergenic | 25.0% |
! | GAACAAACCACATAATATAA+GGG | - | chr3_3:80702225-80702244 | None:intergenic | 25.0% |
!! | ATTCAGATTTTACTAGCTAA+GGG | - | chr3_3:80702270-80702289 | None:intergenic | 25.0% |
!! | AATTCAGATTTTACTAGCTA+AGG | - | chr3_3:80702271-80702290 | None:intergenic | 25.0% |
! | ATTTCTCAAATACATCTATG+AGG | - | chr3_3:80702401-80702420 | None:intergenic | 25.0% |
! | TAGAGACATTAGTAATAACT+TGG | - | chr3_3:80702628-80702647 | None:intergenic | 25.0% |
! | CAAAATTAATTCTACTCCAT+GGG | - | chr3_3:80703196-80703215 | None:intergenic | 25.0% |
!! | ATAGTTTAAAACATTTGCCT+TGG | + | chr3_3:80703247-80703266 | Msa0476790:intron | 25.0% |
! | TATTTGGTTATAAAAGGTAG+GGG | - | chr3_3:80703550-80703569 | None:intergenic | 25.0% |
! | GATATTTGGTTATAAAAGGT+AGG | - | chr3_3:80703552-80703571 | None:intergenic | 25.0% |
!!! | TGTCGTTATTTTATATGAAC+TGG | + | chr3_3:80704124-80704143 | Msa0476790:three_prime_UTR | 25.0% |
! | TGAAAGTTAGAAACATAAAG+TGG | - | chr3_3:80700257-80700276 | None:intergenic | 25.0% |
!!! | CATTATTTTTTAGACAATGC+AGG | + | chr3_3:80700480-80700499 | Msa0476790:intron | 25.0% |
!!! | CTTTTCTTTTCATTTTTCCA+GGG | + | chr3_3:80700596-80700615 | Msa0476790:intron | 25.0% |
! | TCAATAAATACATAAGTGGA+TGG | + | chr3_3:80700743-80700762 | Msa0476790:CDS | 25.0% |
!! | GAACAAATTTTATTGAGCAA+GGG | - | chr3_3:80700810-80700829 | None:intergenic | 25.0% |
!! | AGAACAAATTTTATTGAGCA+AGG | - | chr3_3:80700811-80700830 | None:intergenic | 25.0% |
! | TCTATTATAACTGTGTTAAC+CGG | - | chr3_3:80700961-80700980 | None:intergenic | 25.0% |
! | GTTAACACAGTTATAATAGA+TGG | + | chr3_3:80700961-80700980 | Msa0476790:intron | 25.0% |
! | GTATATTCATTAAGCATCTA+AGG | - | chr3_3:80700998-80701017 | None:intergenic | 25.0% |
!! | ACACTTATTAACCATGATTT+TGG | + | chr3_3:80701027-80701046 | Msa0476790:intron | 25.0% |
! | ATTTGAACACCTGAAAATTA+TGG | - | chr3_3:80701063-80701082 | None:intergenic | 25.0% |
! | TATGTTGAAGAATAACCATA+AGG | - | chr3_3:80701286-80701305 | None:intergenic | 25.0% |
!!! | TTTCTATTCCTTTGTTTTTC+TGG | + | chr3_3:80701367-80701386 | Msa0476790:intron | 25.0% |
! | AATATCTGTTTGAACATTAG+CGG | - | chr3_3:80701604-80701623 | None:intergenic | 25.0% |
!! | TATACAGTGTTCTCAATTTT+CGG | + | chr3_3:80701980-80701999 | Msa0476790:intron | 25.0% |
!! | AAAGAGTATATAAGTGTAAG+TGG | - | chr3_3:80702047-80702066 | None:intergenic | 25.0% |
! | TAAAATGGTGCGTATAAAAA+GGG | - | chr3_3:80702074-80702093 | None:intergenic | 25.0% |
! | GAACAAACCACATAATATAA+GGG | - | chr3_3:80702225-80702244 | None:intergenic | 25.0% |
!! | ATTCAGATTTTACTAGCTAA+GGG | - | chr3_3:80702270-80702289 | None:intergenic | 25.0% |
!! | AATTCAGATTTTACTAGCTA+AGG | - | chr3_3:80702271-80702290 | None:intergenic | 25.0% |
! | ATTTCTCAAATACATCTATG+AGG | - | chr3_3:80702401-80702420 | None:intergenic | 25.0% |
! | TAGAGACATTAGTAATAACT+TGG | - | chr3_3:80702628-80702647 | None:intergenic | 25.0% |
! | CAAAATTAATTCTACTCCAT+GGG | - | chr3_3:80703196-80703215 | None:intergenic | 25.0% |
!! | ATAGTTTAAAACATTTGCCT+TGG | + | chr3_3:80703247-80703266 | Msa0476790:intron | 25.0% |
! | TATTTGGTTATAAAAGGTAG+GGG | - | chr3_3:80703550-80703569 | None:intergenic | 25.0% |
! | GATATTTGGTTATAAAAGGT+AGG | - | chr3_3:80703552-80703571 | None:intergenic | 25.0% |
!!! | TGTCGTTATTTTATATGAAC+TGG | + | chr3_3:80704124-80704143 | Msa0476790:three_prime_UTR | 25.0% |
GTGTATTCTTAACTCAAACT+TGG | - | chr3_3:80700213-80700232 | None:intergenic | 30.0% | |
AACATAAAGTGGAGAAAGAA+TGG | - | chr3_3:80700246-80700265 | None:intergenic | 30.0% | |
GAAAACAAAAATGAAGTAGC+TGG | - | chr3_3:80700301-80700320 | None:intergenic | 30.0% | |
! | TATGCAAACCAAGCTTTTAA+AGG | + | chr3_3:80700440-80700459 | Msa0476790:intron | 30.0% |
! | ATGCAAACCAAGCTTTTAAA+GGG | + | chr3_3:80700441-80700460 | Msa0476790:intron | 30.0% |
!! | TTTTTCTCCCTTTAAAAGCT+TGG | - | chr3_3:80700451-80700470 | None:intergenic | 30.0% |
TAGACAATGCAGGATATTTA+TGG | + | chr3_3:80700490-80700509 | Msa0476790:intron | 30.0% | |
CCTGGAAAAATGAAAAGAAA+AGG | - | chr3_3:80700598-80700617 | None:intergenic | 30.0% | |
!! | CCTTTTCTTTTCATTTTTCC+AGG | + | chr3_3:80700595-80700614 | Msa0476790:intron | 30.0% |
! | GAAATGGTGTAGTATTTTCT+AGG | + | chr3_3:80700632-80700651 | Msa0476790:CDS | 30.0% |
TATTTATTGAAGCCATCAAG+TGG | - | chr3_3:80700733-80700752 | None:intergenic | 30.0% | |
GGCTTCAATAAATACATAAG+TGG | + | chr3_3:80700739-80700758 | Msa0476790:CDS | 30.0% | |
!!! | AGTTTTGAGCTTAGTTTATG+TGG | + | chr3_3:80700865-80700884 | Msa0476790:intron | 30.0% |
!! | GTTTTGAGCTTAGTTTATGT+GGG | + | chr3_3:80700866-80700885 | Msa0476790:intron | 30.0% |
! | TTTTGAGCTTAGTTTATGTG+GGG | + | chr3_3:80700867-80700886 | Msa0476790:intron | 30.0% |
! | CGTGATTAACCATAATTTTC+AGG | + | chr3_3:80701051-80701070 | Msa0476790:intron | 30.0% |
! | GTTTAAATGAGCCTTTTAGT+TGG | + | chr3_3:80701088-80701107 | Msa0476790:intron | 30.0% |
!! | TAGTGAGTGGACTTAATTTT+TGG | - | chr3_3:80701129-80701148 | None:intergenic | 30.0% |
CAAAAAGGAAAAATAGTGAG+TGG | - | chr3_3:80701142-80701161 | None:intergenic | 30.0% | |
ACTGACTGTATTCAACAAAA+AGG | - | chr3_3:80701157-80701176 | None:intergenic | 30.0% | |
! | TTTTTGTTGAATACAGTCAG+TGG | + | chr3_3:80701156-80701175 | Msa0476790:intron | 30.0% |
GAACAATATGAGGAGAATAA+GGG | - | chr3_3:80701320-80701339 | None:intergenic | 30.0% | |
TGAACAATATGAGGAGAATA+AGG | - | chr3_3:80701321-80701340 | None:intergenic | 30.0% | |
ACATGAAACCAGAAAAACAA+AGG | - | chr3_3:80701378-80701397 | None:intergenic | 30.0% | |
ATTACAAATTGCGTGTTAAC+AGG | + | chr3_3:80701412-80701431 | Msa0476790:intron | 30.0% | |
ATATCTGTTTGAACATTAGC+GGG | - | chr3_3:80701603-80701622 | None:intergenic | 30.0% | |
TGTTCAAACAGATATTGATG+CGG | + | chr3_3:80701608-80701627 | Msa0476790:CDS | 30.0% | |
ATTTCACTTACATGTACACA+AGG | - | chr3_3:80702015-80702034 | None:intergenic | 30.0% | |
TTGTGTACATGTAAGTGAAA+TGG | + | chr3_3:80702014-80702033 | Msa0476790:intron | 30.0% | |
GTAAAATGGTGCGTATAAAA+AGG | - | chr3_3:80702075-80702094 | None:intergenic | 30.0% | |
TGAGAAAATGTGATGATAAG+AGG | - | chr3_3:80702142-80702161 | None:intergenic | 30.0% | |
! | TTTTGACATAAATTGCAGCT+TGG | + | chr3_3:80702169-80702188 | Msa0476790:intron | 30.0% |
GGAACAAACCACATAATATA+AGG | - | chr3_3:80702226-80702245 | None:intergenic | 30.0% | |
AAACTTACTTGTGGAGAATA+AGG | - | chr3_3:80702247-80702266 | None:intergenic | 30.0% | |
AACTTCTGAACTAGTTAACT+TGG | + | chr3_3:80702598-80702617 | Msa0476790:CDS | 30.0% | |
TGAAAACACTATAATGCACT+TGG | + | chr3_3:80702817-80702836 | Msa0476790:intron | 30.0% | |
! | GAACATTTTAGACTTTCACA+TGG | - | chr3_3:80702853-80702872 | None:intergenic | 30.0% |
! | TTTCTGTTCTGCATCATTTT+TGG | + | chr3_3:80702874-80702893 | Msa0476790:intron | 30.0% |
!! | TTCTGTTCTGCATCATTTTT+GGG | + | chr3_3:80702875-80702894 | Msa0476790:intron | 30.0% |
! | CTATCAAGAATCAAGGTTTT+TGG | + | chr3_3:80702900-80702919 | Msa0476790:intron | 30.0% |
TTATATTAGAATGGGTGGTT+AGG | - | chr3_3:80703073-80703092 | None:intergenic | 30.0% | |
TCCACATGAATTTCAGATAA+GGG | - | chr3_3:80703172-80703191 | None:intergenic | 30.0% | |
ATCCACATGAATTTCAGATA+AGG | - | chr3_3:80703173-80703192 | None:intergenic | 30.0% | |
GCAAAATTAATTCTACTCCA+TGG | - | chr3_3:80703197-80703216 | None:intergenic | 30.0% | |
TTGGTTGAACAAAAGATTTG+AGG | - | chr3_3:80703284-80703303 | None:intergenic | 30.0% | |
! | TTATGTATTAGCGTGTGTTT+TGG | - | chr3_3:80703387-80703406 | None:intergenic | 30.0% |
AGCGGATATTTGGTTATAAA+AGG | - | chr3_3:80703556-80703575 | None:intergenic | 30.0% | |
! | TTTTATAACCAAATATCCGC+TGG | + | chr3_3:80703555-80703574 | Msa0476790:CDS | 30.0% |
ATATACAATGAACATTGTCC+TGG | + | chr3_3:80703666-80703685 | Msa0476790:CDS | 30.0% | |
GTGTATTCTTAACTCAAACT+TGG | - | chr3_3:80700213-80700232 | None:intergenic | 30.0% | |
AACATAAAGTGGAGAAAGAA+TGG | - | chr3_3:80700246-80700265 | None:intergenic | 30.0% | |
GAAAACAAAAATGAAGTAGC+TGG | - | chr3_3:80700301-80700320 | None:intergenic | 30.0% | |
! | TATGCAAACCAAGCTTTTAA+AGG | + | chr3_3:80700440-80700459 | Msa0476790:intron | 30.0% |
! | ATGCAAACCAAGCTTTTAAA+GGG | + | chr3_3:80700441-80700460 | Msa0476790:intron | 30.0% |
!! | TTTTTCTCCCTTTAAAAGCT+TGG | - | chr3_3:80700451-80700470 | None:intergenic | 30.0% |
TAGACAATGCAGGATATTTA+TGG | + | chr3_3:80700490-80700509 | Msa0476790:intron | 30.0% | |
CCTGGAAAAATGAAAAGAAA+AGG | - | chr3_3:80700598-80700617 | None:intergenic | 30.0% | |
!! | CCTTTTCTTTTCATTTTTCC+AGG | + | chr3_3:80700595-80700614 | Msa0476790:intron | 30.0% |
! | GAAATGGTGTAGTATTTTCT+AGG | + | chr3_3:80700632-80700651 | Msa0476790:CDS | 30.0% |
TATTTATTGAAGCCATCAAG+TGG | - | chr3_3:80700733-80700752 | None:intergenic | 30.0% | |
GGCTTCAATAAATACATAAG+TGG | + | chr3_3:80700739-80700758 | Msa0476790:CDS | 30.0% | |
!!! | AGTTTTGAGCTTAGTTTATG+TGG | + | chr3_3:80700865-80700884 | Msa0476790:intron | 30.0% |
!! | GTTTTGAGCTTAGTTTATGT+GGG | + | chr3_3:80700866-80700885 | Msa0476790:intron | 30.0% |
! | TTTTGAGCTTAGTTTATGTG+GGG | + | chr3_3:80700867-80700886 | Msa0476790:intron | 30.0% |
! | CGTGATTAACCATAATTTTC+AGG | + | chr3_3:80701051-80701070 | Msa0476790:intron | 30.0% |
! | GTTTAAATGAGCCTTTTAGT+TGG | + | chr3_3:80701088-80701107 | Msa0476790:intron | 30.0% |
!! | TAGTGAGTGGACTTAATTTT+TGG | - | chr3_3:80701129-80701148 | None:intergenic | 30.0% |
CAAAAAGGAAAAATAGTGAG+TGG | - | chr3_3:80701142-80701161 | None:intergenic | 30.0% | |
ACTGACTGTATTCAACAAAA+AGG | - | chr3_3:80701157-80701176 | None:intergenic | 30.0% | |
! | TTTTTGTTGAATACAGTCAG+TGG | + | chr3_3:80701156-80701175 | Msa0476790:intron | 30.0% |
GAACAATATGAGGAGAATAA+GGG | - | chr3_3:80701320-80701339 | None:intergenic | 30.0% | |
TGAACAATATGAGGAGAATA+AGG | - | chr3_3:80701321-80701340 | None:intergenic | 30.0% | |
ACATGAAACCAGAAAAACAA+AGG | - | chr3_3:80701378-80701397 | None:intergenic | 30.0% | |
ATTACAAATTGCGTGTTAAC+AGG | + | chr3_3:80701412-80701431 | Msa0476790:intron | 30.0% | |
ATATCTGTTTGAACATTAGC+GGG | - | chr3_3:80701603-80701622 | None:intergenic | 30.0% | |
TGTTCAAACAGATATTGATG+CGG | + | chr3_3:80701608-80701627 | Msa0476790:CDS | 30.0% | |
ATTTCACTTACATGTACACA+AGG | - | chr3_3:80702015-80702034 | None:intergenic | 30.0% | |
TTGTGTACATGTAAGTGAAA+TGG | + | chr3_3:80702014-80702033 | Msa0476790:intron | 30.0% | |
GTAAAATGGTGCGTATAAAA+AGG | - | chr3_3:80702075-80702094 | None:intergenic | 30.0% | |
TGAGAAAATGTGATGATAAG+AGG | - | chr3_3:80702142-80702161 | None:intergenic | 30.0% | |
! | TTTTGACATAAATTGCAGCT+TGG | + | chr3_3:80702169-80702188 | Msa0476790:intron | 30.0% |
GGAACAAACCACATAATATA+AGG | - | chr3_3:80702226-80702245 | None:intergenic | 30.0% | |
AAACTTACTTGTGGAGAATA+AGG | - | chr3_3:80702247-80702266 | None:intergenic | 30.0% | |
AACTTCTGAACTAGTTAACT+TGG | + | chr3_3:80702598-80702617 | Msa0476790:CDS | 30.0% | |
TGAAAACACTATAATGCACT+TGG | + | chr3_3:80702817-80702836 | Msa0476790:intron | 30.0% | |
! | GAACATTTTAGACTTTCACA+TGG | - | chr3_3:80702853-80702872 | None:intergenic | 30.0% |
! | TTTCTGTTCTGCATCATTTT+TGG | + | chr3_3:80702874-80702893 | Msa0476790:intron | 30.0% |
!! | TTCTGTTCTGCATCATTTTT+GGG | + | chr3_3:80702875-80702894 | Msa0476790:intron | 30.0% |
! | CTATCAAGAATCAAGGTTTT+TGG | + | chr3_3:80702900-80702919 | Msa0476790:intron | 30.0% |
TTATATTAGAATGGGTGGTT+AGG | - | chr3_3:80703073-80703092 | None:intergenic | 30.0% | |
TCCACATGAATTTCAGATAA+GGG | - | chr3_3:80703172-80703191 | None:intergenic | 30.0% | |
ATCCACATGAATTTCAGATA+AGG | - | chr3_3:80703173-80703192 | None:intergenic | 30.0% | |
GCAAAATTAATTCTACTCCA+TGG | - | chr3_3:80703197-80703216 | None:intergenic | 30.0% | |
TTGGTTGAACAAAAGATTTG+AGG | - | chr3_3:80703284-80703303 | None:intergenic | 30.0% | |
! | TTATGTATTAGCGTGTGTTT+TGG | - | chr3_3:80703387-80703406 | None:intergenic | 30.0% |
AGCGGATATTTGGTTATAAA+AGG | - | chr3_3:80703556-80703575 | None:intergenic | 30.0% | |
! | TTTTATAACCAAATATCCGC+TGG | + | chr3_3:80703555-80703574 | Msa0476790:CDS | 30.0% |
ATATACAATGAACATTGTCC+TGG | + | chr3_3:80703666-80703685 | Msa0476790:CDS | 30.0% | |
!!! | GAGAAAGAATGGTTTTGTTG+TGG | - | chr3_3:80700235-80700254 | None:intergenic | 35.0% |
AAAGTAAATGCAAGAGAGAG+AGG | - | chr3_3:80700402-80700421 | None:intergenic | 35.0% | |
! | TTTTCCAGGGAAAGAAAATG+AGG | + | chr3_3:80700609-80700628 | Msa0476790:intron | 35.0% |
TTTCCAGGGAAAGAAAATGA+GGG | + | chr3_3:80700610-80700629 | Msa0476790:intron | 35.0% | |
! | TAGGTTTGATGTATTTGCTG+CGG | + | chr3_3:80700651-80700670 | Msa0476790:CDS | 35.0% |
AGAAGAAAAGATCCACTTGA+TGG | + | chr3_3:80700718-80700737 | Msa0476790:CDS | 35.0% | |
ATATCAGTGACCGTCATTAT+TGG | + | chr3_3:80700767-80700786 | Msa0476790:CDS | 35.0% | |
TATCAGTGACCGTCATTATT+GGG | + | chr3_3:80700768-80700787 | Msa0476790:CDS | 35.0% | |
GGTTAATAAGTGTAGACAAC+TGG | - | chr3_3:80701020-80701039 | None:intergenic | 35.0% | |
GTTAATCACGTCCAAAATCA+TGG | - | chr3_3:80701041-80701060 | None:intergenic | 35.0% | |
GACAGAAGTAACAAACAATG+AGG | - | chr3_3:80701252-80701271 | None:intergenic | 35.0% | |
TGAAGAATAACCATAAGGCT+CGG | - | chr3_3:80701281-80701300 | None:intergenic | 35.0% | |
AAATTGCGTGTTAACAGGAT+TGG | + | chr3_3:80701417-80701436 | Msa0476790:intron | 35.0% | |
!! | ATGCTAGTATTGACGTTTCT+TGG | + | chr3_3:80701840-80701859 | Msa0476790:CDS | 35.0% |
TAGAGAACAATGTAGTAGCA+AGG | + | chr3_3:80702330-80702349 | Msa0476790:intron | 35.0% | |
ATATTGGATCCACTCATTCA+TGG | - | chr3_3:80702492-80702511 | None:intergenic | 35.0% | |
CTGTATTTGCAGTAGGATAT+TGG | - | chr3_3:80702508-80702527 | None:intergenic | 35.0% | |
CATTCAATTATGTACCTGTG+TGG | - | chr3_3:80702786-80702805 | None:intergenic | 35.0% | |
!! | TCTGTTCTGCATCATTTTTG+GGG | + | chr3_3:80702876-80702895 | Msa0476790:intron | 35.0% |
TAGCACTCTTCAAAAGATTG+AGG | - | chr3_3:80703126-80703145 | None:intergenic | 35.0% | |
ACATGAATTTCAGATAAGGG+TGG | - | chr3_3:80703169-80703188 | None:intergenic | 35.0% | |
! | ACCCTTATCTGAAATTCATG+TGG | + | chr3_3:80703168-80703187 | Msa0476790:intron | 35.0% |
TTGAGGCTAAAAATCAACCA+AGG | - | chr3_3:80703267-80703286 | None:intergenic | 35.0% | |
CATTTATTCCAGCGGATATT+TGG | - | chr3_3:80703566-80703585 | None:intergenic | 35.0% | |
ATATCCGCTGGAATAAATGT+TGG | + | chr3_3:80703567-80703586 | Msa0476790:CDS | 35.0% | |
GTTACCAACATTTATTCCAG+CGG | - | chr3_3:80703574-80703593 | None:intergenic | 35.0% | |
CGATGGGGCATAATTATATA+AGG | - | chr3_3:80703598-80703617 | None:intergenic | 35.0% | |
TGTGAATGTTTCTCGAACAA+AGG | - | chr3_3:80703643-80703662 | None:intergenic | 35.0% | |
! | TGATGTTCTCCTTGATCTTT+TGG | + | chr3_3:80703745-80703764 | Msa0476790:CDS | 35.0% |
! | GATGTTCTCCTTGATCTTTT+GGG | + | chr3_3:80703746-80703765 | Msa0476790:CDS | 35.0% |
! | ATGTTCTCCTTGATCTTTTG+GGG | + | chr3_3:80703747-80703766 | Msa0476790:CDS | 35.0% |
TATATCCTTGTCACCTTTCA+GGG | - | chr3_3:80703978-80703997 | None:intergenic | 35.0% | |
ATATATCCTTGTCACCTTTC+AGG | - | chr3_3:80703979-80703998 | None:intergenic | 35.0% | |
! | GCTTCATGTTTGTTCTTTTC+CGG | + | chr3_3:80704201-80704220 | Msa0476790:three_prime_UTR | 35.0% |
AAAGGGATTATGTTTGAGCT+AGG | - | chr3_3:80704228-80704247 | None:intergenic | 35.0% | |
!!! | GAGAAAGAATGGTTTTGTTG+TGG | - | chr3_3:80700235-80700254 | None:intergenic | 35.0% |
AAAGTAAATGCAAGAGAGAG+AGG | - | chr3_3:80700402-80700421 | None:intergenic | 35.0% | |
! | TTTTCCAGGGAAAGAAAATG+AGG | + | chr3_3:80700609-80700628 | Msa0476790:intron | 35.0% |
TTTCCAGGGAAAGAAAATGA+GGG | + | chr3_3:80700610-80700629 | Msa0476790:intron | 35.0% | |
! | TAGGTTTGATGTATTTGCTG+CGG | + | chr3_3:80700651-80700670 | Msa0476790:CDS | 35.0% |
AGAAGAAAAGATCCACTTGA+TGG | + | chr3_3:80700718-80700737 | Msa0476790:CDS | 35.0% | |
ATATCAGTGACCGTCATTAT+TGG | + | chr3_3:80700767-80700786 | Msa0476790:CDS | 35.0% | |
TATCAGTGACCGTCATTATT+GGG | + | chr3_3:80700768-80700787 | Msa0476790:CDS | 35.0% | |
GGTTAATAAGTGTAGACAAC+TGG | - | chr3_3:80701020-80701039 | None:intergenic | 35.0% | |
GTTAATCACGTCCAAAATCA+TGG | - | chr3_3:80701041-80701060 | None:intergenic | 35.0% | |
GACAGAAGTAACAAACAATG+AGG | - | chr3_3:80701252-80701271 | None:intergenic | 35.0% | |
TGAAGAATAACCATAAGGCT+CGG | - | chr3_3:80701281-80701300 | None:intergenic | 35.0% | |
AAATTGCGTGTTAACAGGAT+TGG | + | chr3_3:80701417-80701436 | Msa0476790:intron | 35.0% | |
!! | ATGCTAGTATTGACGTTTCT+TGG | + | chr3_3:80701840-80701859 | Msa0476790:CDS | 35.0% |
TAGAGAACAATGTAGTAGCA+AGG | + | chr3_3:80702330-80702349 | Msa0476790:intron | 35.0% | |
ATATTGGATCCACTCATTCA+TGG | - | chr3_3:80702492-80702511 | None:intergenic | 35.0% | |
CTGTATTTGCAGTAGGATAT+TGG | - | chr3_3:80702508-80702527 | None:intergenic | 35.0% | |
CATTCAATTATGTACCTGTG+TGG | - | chr3_3:80702786-80702805 | None:intergenic | 35.0% | |
!! | TCTGTTCTGCATCATTTTTG+GGG | + | chr3_3:80702876-80702895 | Msa0476790:intron | 35.0% |
TAGCACTCTTCAAAAGATTG+AGG | - | chr3_3:80703126-80703145 | None:intergenic | 35.0% | |
ACATGAATTTCAGATAAGGG+TGG | - | chr3_3:80703169-80703188 | None:intergenic | 35.0% | |
! | ACCCTTATCTGAAATTCATG+TGG | + | chr3_3:80703168-80703187 | Msa0476790:intron | 35.0% |
TTGAGGCTAAAAATCAACCA+AGG | - | chr3_3:80703267-80703286 | None:intergenic | 35.0% | |
CATTTATTCCAGCGGATATT+TGG | - | chr3_3:80703566-80703585 | None:intergenic | 35.0% | |
ATATCCGCTGGAATAAATGT+TGG | + | chr3_3:80703567-80703586 | Msa0476790:CDS | 35.0% | |
GTTACCAACATTTATTCCAG+CGG | - | chr3_3:80703574-80703593 | None:intergenic | 35.0% | |
CGATGGGGCATAATTATATA+AGG | - | chr3_3:80703598-80703617 | None:intergenic | 35.0% | |
TGTGAATGTTTCTCGAACAA+AGG | - | chr3_3:80703643-80703662 | None:intergenic | 35.0% | |
! | TGATGTTCTCCTTGATCTTT+TGG | + | chr3_3:80703745-80703764 | Msa0476790:CDS | 35.0% |
! | GATGTTCTCCTTGATCTTTT+GGG | + | chr3_3:80703746-80703765 | Msa0476790:CDS | 35.0% |
! | ATGTTCTCCTTGATCTTTTG+GGG | + | chr3_3:80703747-80703766 | Msa0476790:CDS | 35.0% |
TATATCCTTGTCACCTTTCA+GGG | - | chr3_3:80703978-80703997 | None:intergenic | 35.0% | |
ATATATCCTTGTCACCTTTC+AGG | - | chr3_3:80703979-80703998 | None:intergenic | 35.0% | |
! | GCTTCATGTTTGTTCTTTTC+CGG | + | chr3_3:80704201-80704220 | Msa0476790:three_prime_UTR | 35.0% |
AAAGGGATTATGTTTGAGCT+AGG | - | chr3_3:80704228-80704247 | None:intergenic | 35.0% | |
TAACTCAAACTTGGTACCAC+TGG | - | chr3_3:80700204-80700223 | None:intergenic | 40.0% | |
AGTGGAAGAGTGACATAGTA+AGG | - | chr3_3:80700339-80700358 | None:intergenic | 40.0% | |
TGACAAGGAAGAAGAAGAAG+TGG | - | chr3_3:80700357-80700376 | None:intergenic | 40.0% | |
! | TTTCCCTCATTTTCTTTCCC+TGG | - | chr3_3:80700616-80700635 | None:intergenic | 40.0% |
GGGAAAGAAAATGAGGGAAA+TGG | + | chr3_3:80700616-80700635 | Msa0476790:intron | 40.0% | |
AGGTTACAGCCCAATAATGA+CGG | - | chr3_3:80700780-80700799 | None:intergenic | 40.0% | |
TATTGAGCAAGGGTTGAAAG+AGG | - | chr3_3:80700800-80700819 | None:intergenic | 40.0% | |
CTTTCGCAACGAATTGTTAC+CGG | + | chr3_3:80700939-80700958 | Msa0476790:intron | 40.0% | |
GGATGTGCAGTGCTATATAT+TGG | + | chr3_3:80701438-80701457 | Msa0476790:CDS | 40.0% | |
GCAGTGCTATATATTGGACA+AGG | + | chr3_3:80701444-80701463 | Msa0476790:CDS | 40.0% | |
AACATCGACGTTGCAATATG+TGG | + | chr3_3:80701485-80701504 | Msa0476790:CDS | 40.0% | |
ACAGATATCAATGCTTCTGC+TGG | + | chr3_3:80701636-80701655 | Msa0476790:CDS | 40.0% | |
CAGATATCAATGCTTCTGCT+GGG | + | chr3_3:80701637-80701656 | Msa0476790:CDS | 40.0% | |
GAATATTGTGAGCCTGATAC+AGG | + | chr3_3:80701787-80701806 | Msa0476790:intron | 40.0% | |
!! | CTGACTTGTTGCTGTTATTG+AGG | + | chr3_3:80701931-80701950 | Msa0476790:intron | 40.0% |
TACGATCGCTGAGTGTAAAA+TGG | - | chr3_3:80702089-80702108 | None:intergenic | 40.0% | |
ACTGGCACCCTTATATTATG+TGG | + | chr3_3:80702215-80702234 | Msa0476790:CDS | 40.0% | |
AGCTAAGGGAAACTTACTTG+TGG | - | chr3_3:80702256-80702275 | None:intergenic | 40.0% | |
TGCTGTCACACTATCAAAAG+TGG | - | chr3_3:80702456-80702475 | None:intergenic | 40.0% | |
CAACAATGTTTCTTGTGCTG+TGG | - | chr3_3:80702564-80702583 | None:intergenic | 40.0% | |
TAGTACAGCGGCGTAAAATT+GGG | - | chr3_3:80702665-80702684 | None:intergenic | 40.0% | |
CATTGTCTATCTGTCATGTC+AGG | - | chr3_3:80702734-80702753 | None:intergenic | 40.0% | |
ACAGATAGACAATGTGACTC+TGG | + | chr3_3:80702740-80702759 | Msa0476790:CDS | 40.0% | |
TTGGGGTCTATCAAGAATCA+AGG | + | chr3_3:80702893-80702912 | Msa0476790:intron | 40.0% | |
TGAAATTCATGTGGATCCCA+TGG | + | chr3_3:80703177-80703196 | Msa0476790:intron | 40.0% | |
! | ATATCTCTGATGGTGAAACC+TGG | - | chr3_3:80703506-80703525 | None:intergenic | 40.0% |
ATGAACATTGTCCTGGTCTA+CGG | + | chr3_3:80703673-80703692 | Msa0476790:CDS | 40.0% | |
TTACTATAATGCCGTAGACC+AGG | - | chr3_3:80703687-80703706 | None:intergenic | 40.0% | |
ATACACACCCCAAAAGATCA+AGG | - | chr3_3:80703757-80703776 | None:intergenic | 40.0% | |
!!! | TTGATCTTTTGGGGTGTGTA+TGG | + | chr3_3:80703756-80703775 | Msa0476790:CDS | 40.0% |
AGTTCAAGTGCATGACTTGA+TGG | - | chr3_3:80703945-80703964 | None:intergenic | 40.0% | |
TTGTCACCTTTCAGGGATAT+GGG | - | chr3_3:80703971-80703990 | None:intergenic | 40.0% | |
TGAACTGGAAAAGGAGAATC+CGG | + | chr3_3:80704139-80704158 | Msa0476790:three_prime_UTR | 40.0% | |
CTCGTGTCTGATTCTTTATC+CGG | - | chr3_3:80704161-80704180 | None:intergenic | 40.0% | |
GATTATGTTTGAGCTAGGAC+CGG | - | chr3_3:80704223-80704242 | None:intergenic | 40.0% | |
TAACTCAAACTTGGTACCAC+TGG | - | chr3_3:80700204-80700223 | None:intergenic | 40.0% | |
AGTGGAAGAGTGACATAGTA+AGG | - | chr3_3:80700339-80700358 | None:intergenic | 40.0% | |
TGACAAGGAAGAAGAAGAAG+TGG | - | chr3_3:80700357-80700376 | None:intergenic | 40.0% | |
! | TTTCCCTCATTTTCTTTCCC+TGG | - | chr3_3:80700616-80700635 | None:intergenic | 40.0% |
GGGAAAGAAAATGAGGGAAA+TGG | + | chr3_3:80700616-80700635 | Msa0476790:intron | 40.0% | |
AGGTTACAGCCCAATAATGA+CGG | - | chr3_3:80700780-80700799 | None:intergenic | 40.0% | |
TATTGAGCAAGGGTTGAAAG+AGG | - | chr3_3:80700800-80700819 | None:intergenic | 40.0% | |
CTTTCGCAACGAATTGTTAC+CGG | + | chr3_3:80700939-80700958 | Msa0476790:intron | 40.0% | |
GGATGTGCAGTGCTATATAT+TGG | + | chr3_3:80701438-80701457 | Msa0476790:CDS | 40.0% | |
GCAGTGCTATATATTGGACA+AGG | + | chr3_3:80701444-80701463 | Msa0476790:CDS | 40.0% | |
AACATCGACGTTGCAATATG+TGG | + | chr3_3:80701485-80701504 | Msa0476790:CDS | 40.0% | |
ACAGATATCAATGCTTCTGC+TGG | + | chr3_3:80701636-80701655 | Msa0476790:CDS | 40.0% | |
CAGATATCAATGCTTCTGCT+GGG | + | chr3_3:80701637-80701656 | Msa0476790:CDS | 40.0% | |
GAATATTGTGAGCCTGATAC+AGG | + | chr3_3:80701787-80701806 | Msa0476790:intron | 40.0% | |
!! | CTGACTTGTTGCTGTTATTG+AGG | + | chr3_3:80701931-80701950 | Msa0476790:intron | 40.0% |
TACGATCGCTGAGTGTAAAA+TGG | - | chr3_3:80702089-80702108 | None:intergenic | 40.0% | |
ACTGGCACCCTTATATTATG+TGG | + | chr3_3:80702215-80702234 | Msa0476790:CDS | 40.0% | |
AGCTAAGGGAAACTTACTTG+TGG | - | chr3_3:80702256-80702275 | None:intergenic | 40.0% | |
TGCTGTCACACTATCAAAAG+TGG | - | chr3_3:80702456-80702475 | None:intergenic | 40.0% | |
CAACAATGTTTCTTGTGCTG+TGG | - | chr3_3:80702564-80702583 | None:intergenic | 40.0% | |
TAGTACAGCGGCGTAAAATT+GGG | - | chr3_3:80702665-80702684 | None:intergenic | 40.0% | |
CATTGTCTATCTGTCATGTC+AGG | - | chr3_3:80702734-80702753 | None:intergenic | 40.0% | |
ACAGATAGACAATGTGACTC+TGG | + | chr3_3:80702740-80702759 | Msa0476790:CDS | 40.0% | |
TTGGGGTCTATCAAGAATCA+AGG | + | chr3_3:80702893-80702912 | Msa0476790:intron | 40.0% | |
TGAAATTCATGTGGATCCCA+TGG | + | chr3_3:80703177-80703196 | Msa0476790:intron | 40.0% | |
! | ATATCTCTGATGGTGAAACC+TGG | - | chr3_3:80703506-80703525 | None:intergenic | 40.0% |
ATGAACATTGTCCTGGTCTA+CGG | + | chr3_3:80703673-80703692 | Msa0476790:CDS | 40.0% | |
TTACTATAATGCCGTAGACC+AGG | - | chr3_3:80703687-80703706 | None:intergenic | 40.0% | |
ATACACACCCCAAAAGATCA+AGG | - | chr3_3:80703757-80703776 | None:intergenic | 40.0% | |
!!! | TTGATCTTTTGGGGTGTGTA+TGG | + | chr3_3:80703756-80703775 | Msa0476790:CDS | 40.0% |
AGTTCAAGTGCATGACTTGA+TGG | - | chr3_3:80703945-80703964 | None:intergenic | 40.0% | |
TTGTCACCTTTCAGGGATAT+GGG | - | chr3_3:80703971-80703990 | None:intergenic | 40.0% | |
TGAACTGGAAAAGGAGAATC+CGG | + | chr3_3:80704139-80704158 | Msa0476790:three_prime_UTR | 40.0% | |
CTCGTGTCTGATTCTTTATC+CGG | - | chr3_3:80704161-80704180 | None:intergenic | 40.0% | |
GATTATGTTTGAGCTAGGAC+CGG | - | chr3_3:80704223-80704242 | None:intergenic | 40.0% | |
CAAACAGTGAGTGTGTGTGT+GGG | - | chr3_3:80700174-80700193 | None:intergenic | 45.0% | |
AACTTGGTACCACTGGCAAA+TGG | - | chr3_3:80700197-80700216 | None:intergenic | 45.0% | |
TCCTTGTCACAACTCACTTC+AGG | + | chr3_3:80700368-80700387 | Msa0476790:CDS | 45.0% | |
ACCTGAAGTGAGTTGTGACA+AGG | - | chr3_3:80700372-80700391 | None:intergenic | 45.0% | |
GGAAGTGGTGAGTTCTCATA+TGG | - | chr3_3:80700679-80700698 | None:intergenic | 45.0% | |
! | CTAGTTCTCTCTGCAGCTAA+GGG | - | chr3_3:80700700-80700719 | None:intergenic | 45.0% |
!! | TCTAGTTCTCTCTGCAGCTA+AGG | - | chr3_3:80700701-80700720 | None:intergenic | 45.0% |
ACTGCTGCAATGCTGAATAC+AGG | - | chr3_3:80701196-80701215 | None:intergenic | 45.0% | |
TATTCAGCATTGCAGCAGTC+TGG | + | chr3_3:80701197-80701216 | Msa0476790:CDS | 45.0% | |
!! | ATTGCAGCAGTCTGGTTCTT+AGG | + | chr3_3:80701205-80701224 | Msa0476790:CDS | 45.0% |
TGTCGTAAAACCGAGCCTTA+TGG | + | chr3_3:80701268-80701287 | Msa0476790:CDS | 45.0% | |
! | GTATCAAGCTGATTCTGCTG+TGG | + | chr3_3:80701509-80701528 | Msa0476790:CDS | 45.0% |
TTACCTTGCTCAAGCTAAGC+TGG | + | chr3_3:80701554-80701573 | Msa0476790:CDS | 45.0% | |
TATTGTGAGCCTGATACAGG+AGG | + | chr3_3:80701790-80701809 | Msa0476790:intron | 45.0% | |
! | AATTGCAGCTTGGTAATCGC+AGG | + | chr3_3:80702179-80702198 | Msa0476790:intron | 45.0% |
GCAGGATGGTTTCTTGTTAC+TGG | + | chr3_3:80702197-80702216 | Msa0476790:CDS | 45.0% | |
CATGTGTAGCCATGAATGAG+TGG | + | chr3_3:80702480-80702499 | Msa0476790:CDS | 45.0% | |
TCGAGAGCTGTATTTGCAGT+AGG | - | chr3_3:80702515-80702534 | None:intergenic | 45.0% | |
AGTACAGCGGCGTAAAATTG+GGG | - | chr3_3:80702664-80702683 | None:intergenic | 45.0% | |
GTAGTACAGCGGCGTAAAAT+TGG | - | chr3_3:80702666-80702685 | None:intergenic | 45.0% | |
CCGGATTGATTGTAGTACAG+CGG | - | chr3_3:80702677-80702696 | None:intergenic | 45.0% | |
CCGCTGTACTACAATCAATC+CGG | + | chr3_3:80702674-80702693 | Msa0476790:CDS | 45.0% | |
GTCTATCTGTCATGTCAGGA+CGG | - | chr3_3:80702730-80702749 | None:intergenic | 45.0% | |
AATCAGTTTCCGTGTGATGC+AGG | + | chr3_3:80703461-80703480 | Msa0476790:intron | 45.0% | |
TTCCGTGTGATGCAGGTATA+TGG | + | chr3_3:80703468-80703487 | Msa0476790:intron | 45.0% | |
TCCGTGTGATGCAGGTATAT+GGG | + | chr3_3:80703469-80703488 | Msa0476790:intron | 45.0% | |
TCCCATATACCTGCATCACA+CGG | - | chr3_3:80703473-80703492 | None:intergenic | 45.0% | |
ATATGGGAACTTTGTGTGCC+AGG | + | chr3_3:80703485-80703504 | Msa0476790:CDS | 45.0% | |
TGGGTCATGCATATCTCTGA+TGG | - | chr3_3:80703516-80703535 | None:intergenic | 45.0% | |
TCAGAGATATGCATGACCCA+AGG | + | chr3_3:80703516-80703535 | Msa0476790:CDS | 45.0% | |
TTGTAGCTCAACAAGCGATG+GGG | - | chr3_3:80703613-80703632 | None:intergenic | 45.0% | |
CTTGTAGCTCAACAAGCGAT+GGG | - | chr3_3:80703614-80703633 | None:intergenic | 45.0% | |
TCTTGTAGCTCAACAAGCGA+TGG | - | chr3_3:80703615-80703634 | None:intergenic | 45.0% | |
! | GGTGTAAGTGCAAGTCTTGT+TGG | - | chr3_3:80703924-80703943 | None:intergenic | 45.0% |
ACTTAGCCCATATCCCTGAA+AGG | + | chr3_3:80703962-80703981 | Msa0476790:exon | 45.0% | |
CTTGTCACCTTTCAGGGATA+TGG | - | chr3_3:80703972-80703991 | None:intergenic | 45.0% | |
CATATCCCTGAAAGGTGACA+AGG | + | chr3_3:80703970-80703989 | Msa0476790:exon | 45.0% | |
CAAACAGTGAGTGTGTGTGT+GGG | - | chr3_3:80700174-80700193 | None:intergenic | 45.0% | |
AACTTGGTACCACTGGCAAA+TGG | - | chr3_3:80700197-80700216 | None:intergenic | 45.0% | |
TCCTTGTCACAACTCACTTC+AGG | + | chr3_3:80700368-80700387 | Msa0476790:CDS | 45.0% | |
ACCTGAAGTGAGTTGTGACA+AGG | - | chr3_3:80700372-80700391 | None:intergenic | 45.0% | |
GGAAGTGGTGAGTTCTCATA+TGG | - | chr3_3:80700679-80700698 | None:intergenic | 45.0% | |
! | CTAGTTCTCTCTGCAGCTAA+GGG | - | chr3_3:80700700-80700719 | None:intergenic | 45.0% |
!! | TCTAGTTCTCTCTGCAGCTA+AGG | - | chr3_3:80700701-80700720 | None:intergenic | 45.0% |
ACTGCTGCAATGCTGAATAC+AGG | - | chr3_3:80701196-80701215 | None:intergenic | 45.0% | |
TATTCAGCATTGCAGCAGTC+TGG | + | chr3_3:80701197-80701216 | Msa0476790:CDS | 45.0% | |
!! | ATTGCAGCAGTCTGGTTCTT+AGG | + | chr3_3:80701205-80701224 | Msa0476790:CDS | 45.0% |
TGTCGTAAAACCGAGCCTTA+TGG | + | chr3_3:80701268-80701287 | Msa0476790:CDS | 45.0% | |
! | GTATCAAGCTGATTCTGCTG+TGG | + | chr3_3:80701509-80701528 | Msa0476790:CDS | 45.0% |
TTACCTTGCTCAAGCTAAGC+TGG | + | chr3_3:80701554-80701573 | Msa0476790:CDS | 45.0% | |
TATTGTGAGCCTGATACAGG+AGG | + | chr3_3:80701790-80701809 | Msa0476790:intron | 45.0% | |
! | AATTGCAGCTTGGTAATCGC+AGG | + | chr3_3:80702179-80702198 | Msa0476790:intron | 45.0% |
GCAGGATGGTTTCTTGTTAC+TGG | + | chr3_3:80702197-80702216 | Msa0476790:CDS | 45.0% | |
CATGTGTAGCCATGAATGAG+TGG | + | chr3_3:80702480-80702499 | Msa0476790:CDS | 45.0% | |
TCGAGAGCTGTATTTGCAGT+AGG | - | chr3_3:80702515-80702534 | None:intergenic | 45.0% | |
AGTACAGCGGCGTAAAATTG+GGG | - | chr3_3:80702664-80702683 | None:intergenic | 45.0% | |
GTAGTACAGCGGCGTAAAAT+TGG | - | chr3_3:80702666-80702685 | None:intergenic | 45.0% | |
CCGGATTGATTGTAGTACAG+CGG | - | chr3_3:80702677-80702696 | None:intergenic | 45.0% | |
CCGCTGTACTACAATCAATC+CGG | + | chr3_3:80702674-80702693 | Msa0476790:CDS | 45.0% | |
GTCTATCTGTCATGTCAGGA+CGG | - | chr3_3:80702730-80702749 | None:intergenic | 45.0% | |
AATCAGTTTCCGTGTGATGC+AGG | + | chr3_3:80703461-80703480 | Msa0476790:intron | 45.0% | |
TTCCGTGTGATGCAGGTATA+TGG | + | chr3_3:80703468-80703487 | Msa0476790:intron | 45.0% | |
TCCGTGTGATGCAGGTATAT+GGG | + | chr3_3:80703469-80703488 | Msa0476790:intron | 45.0% | |
TCCCATATACCTGCATCACA+CGG | - | chr3_3:80703473-80703492 | None:intergenic | 45.0% | |
ATATGGGAACTTTGTGTGCC+AGG | + | chr3_3:80703485-80703504 | Msa0476790:CDS | 45.0% | |
TGGGTCATGCATATCTCTGA+TGG | - | chr3_3:80703516-80703535 | None:intergenic | 45.0% | |
TCAGAGATATGCATGACCCA+AGG | + | chr3_3:80703516-80703535 | Msa0476790:CDS | 45.0% | |
TTGTAGCTCAACAAGCGATG+GGG | - | chr3_3:80703613-80703632 | None:intergenic | 45.0% | |
CTTGTAGCTCAACAAGCGAT+GGG | - | chr3_3:80703614-80703633 | None:intergenic | 45.0% | |
TCTTGTAGCTCAACAAGCGA+TGG | - | chr3_3:80703615-80703634 | None:intergenic | 45.0% | |
! | GGTGTAAGTGCAAGTCTTGT+TGG | - | chr3_3:80703924-80703943 | None:intergenic | 45.0% |
ACTTAGCCCATATCCCTGAA+AGG | + | chr3_3:80703962-80703981 | Msa0476790:exon | 45.0% | |
CTTGTCACCTTTCAGGGATA+TGG | - | chr3_3:80703972-80703991 | None:intergenic | 45.0% | |
CATATCCCTGAAAGGTGACA+AGG | + | chr3_3:80703970-80703989 | Msa0476790:exon | 45.0% | |
!!! | TTTATTTTATAAATGAATTT+TGG | + | chr3_3:80700898-80700917 | Msa0476790:intron | 5.0% |
!!! | TATTTTAATTATATTAGAAT+GGG | - | chr3_3:80703081-80703100 | None:intergenic | 5.0% |
!!! | ATATTTTAATTATATTAGAA+TGG | - | chr3_3:80703082-80703101 | None:intergenic | 5.0% |
!!! | TTTATTTTATAAATGAATTT+TGG | + | chr3_3:80700898-80700917 | Msa0476790:intron | 5.0% |
!!! | TATTTTAATTATATTAGAAT+GGG | - | chr3_3:80703081-80703100 | None:intergenic | 5.0% |
!!! | ATATTTTAATTATATTAGAA+TGG | - | chr3_3:80703082-80703101 | None:intergenic | 5.0% |
TGTGTGTGTGGGAGAGAAAG+AGG | - | chr3_3:80700163-80700182 | None:intergenic | 50.0% | |
GCAAACAGTGAGTGTGTGTG+TGG | - | chr3_3:80700175-80700194 | None:intergenic | 50.0% | |
! | CACTGTTTGCCATTTGCCAG+TGG | + | chr3_3:80700185-80700204 | Msa0476790:five_prime_UTR | 50.0% |
!! | GCAGTCTGGTTCTTAGGCTT+TGG | + | chr3_3:80701211-80701230 | Msa0476790:CDS | 50.0% |
! | CAACCAGCTTAGCTTGAGCA+AGG | - | chr3_3:80701560-80701579 | None:intergenic | 50.0% |
CTTGCTCAAGCTAAGCTGGT+TGG | + | chr3_3:80701558-80701577 | Msa0476790:CDS | 50.0% | |
GTACAGCGGCGTAAAATTGG+GGG | - | chr3_3:80702663-80702682 | None:intergenic | 50.0% | |
TCTGTCATGTCAGGACGGAA+CGG | - | chr3_3:80702725-80702744 | None:intergenic | 50.0% | |
! | TTAGGTCCGACTCGATCAAG+GGG | - | chr3_3:80703055-80703074 | None:intergenic | 50.0% |
! | GTTAGGTCCGACTCGATCAA+GGG | - | chr3_3:80703056-80703075 | None:intergenic | 50.0% |
! | TGGAGAGAGACAAGGAGTGT+TGG | - | chr3_3:80703149-80703168 | None:intergenic | 50.0% |
GATAAGGGTGGAGAGAGACA+AGG | - | chr3_3:80703157-80703176 | None:intergenic | 50.0% | |
GGTAGGGGTTAAACGTCCTT+GGG | - | chr3_3:80703535-80703554 | None:intergenic | 50.0% | |
AGGTAGGGGTTAAACGTCCT+TGG | - | chr3_3:80703536-80703555 | None:intergenic | 50.0% | |
!! | AGTGCAAGTCTTGTTGGTGC+AGG | - | chr3_3:80703918-80703937 | None:intergenic | 50.0% |
TGTGTGTGTGGGAGAGAAAG+AGG | - | chr3_3:80700163-80700182 | None:intergenic | 50.0% | |
GCAAACAGTGAGTGTGTGTG+TGG | - | chr3_3:80700175-80700194 | None:intergenic | 50.0% | |
! | CACTGTTTGCCATTTGCCAG+TGG | + | chr3_3:80700185-80700204 | Msa0476790:five_prime_UTR | 50.0% |
!! | GCAGTCTGGTTCTTAGGCTT+TGG | + | chr3_3:80701211-80701230 | Msa0476790:CDS | 50.0% |
! | CAACCAGCTTAGCTTGAGCA+AGG | - | chr3_3:80701560-80701579 | None:intergenic | 50.0% |
CTTGCTCAAGCTAAGCTGGT+TGG | + | chr3_3:80701558-80701577 | Msa0476790:CDS | 50.0% | |
GTACAGCGGCGTAAAATTGG+GGG | - | chr3_3:80702663-80702682 | None:intergenic | 50.0% | |
TCTGTCATGTCAGGACGGAA+CGG | - | chr3_3:80702725-80702744 | None:intergenic | 50.0% | |
! | TTAGGTCCGACTCGATCAAG+GGG | - | chr3_3:80703055-80703074 | None:intergenic | 50.0% |
! | GTTAGGTCCGACTCGATCAA+GGG | - | chr3_3:80703056-80703075 | None:intergenic | 50.0% |
! | TGGAGAGAGACAAGGAGTGT+TGG | - | chr3_3:80703149-80703168 | None:intergenic | 50.0% |
GATAAGGGTGGAGAGAGACA+AGG | - | chr3_3:80703157-80703176 | None:intergenic | 50.0% | |
GGTAGGGGTTAAACGTCCTT+GGG | - | chr3_3:80703535-80703554 | None:intergenic | 50.0% | |
AGGTAGGGGTTAAACGTCCT+TGG | - | chr3_3:80703536-80703555 | None:intergenic | 50.0% | |
!! | AGTGCAAGTCTTGTTGGTGC+AGG | - | chr3_3:80703918-80703937 | None:intergenic | 50.0% |
CTCTCTGCAGCTAAGGGAAG+TGG | - | chr3_3:80700694-80700713 | None:intergenic | 55.0% | |
! | GCAGCTTGGTAATCGCAGGA+TGG | + | chr3_3:80702183-80702202 | Msa0476790:intron | 55.0% |
CGACGATATACTGCCCTGTG+TGG | + | chr3_3:80702532-80702551 | Msa0476790:CDS | 55.0% | |
!! | GCTGTGGCTTTGTCCACACA+GGG | - | chr3_3:80702548-80702567 | None:intergenic | 55.0% |
!! | TGCTGTGGCTTTGTCCACAC+AGG | - | chr3_3:80702549-80702568 | None:intergenic | 55.0% |
TCGCAGAGGAGTGGCATCAA+GGG | - | chr3_3:80702701-80702720 | None:intergenic | 55.0% | |
ATCGCAGAGGAGTGGCATCA+AGG | - | chr3_3:80702702-80702721 | None:intergenic | 55.0% | |
GAACCTAAGCAACGCCACAC+AGG | + | chr3_3:80702769-80702788 | Msa0476790:CDS | 55.0% | |
GTACCTGTGTGGCGTTGCTT+AGG | - | chr3_3:80702775-80702794 | None:intergenic | 55.0% | |
TGGTCCAGCTCACGATGACT+CGG | - | chr3_3:80703006-80703025 | None:intergenic | 55.0% | |
! | ACCACTCAACCTGCGGATTG+AGG | + | chr3_3:80703022-80703041 | Msa0476790:intron | 55.0% |
! | ACCTCAATCCGCAGGTTGAG+TGG | - | chr3_3:80703026-80703045 | None:intergenic | 55.0% |
! | ACTCAACCTGCGGATTGAGG+TGG | + | chr3_3:80703025-80703044 | Msa0476790:intron | 55.0% |
! | CTCAACCTGCGGATTGAGGT+GGG | + | chr3_3:80703026-80703045 | Msa0476790:intron | 55.0% |
GGGTTACCCCTTGATCGAGT+CGG | + | chr3_3:80703046-80703065 | Msa0476790:intron | 55.0% | |
! | GGTTAGGTCCGACTCGATCA+AGG | - | chr3_3:80703057-80703076 | None:intergenic | 55.0% |
GGGGTGTGTATGGAAGAGAG+CGG | + | chr3_3:80703766-80703785 | Msa0476790:CDS | 55.0% | |
GTGTGTATGGAAGAGAGCGG+AGG | + | chr3_3:80703769-80703788 | Msa0476790:CDS | 55.0% | |
GGTGTAGGTGCACGTCTTGT+TGG | - | chr3_3:80703858-80703877 | None:intergenic | 55.0% | |
AGTGCAGGTGCACGTCTTGT+TGG | - | chr3_3:80703891-80703910 | None:intergenic | 55.0% | |
CTCTCTGCAGCTAAGGGAAG+TGG | - | chr3_3:80700694-80700713 | None:intergenic | 55.0% | |
! | GCAGCTTGGTAATCGCAGGA+TGG | + | chr3_3:80702183-80702202 | Msa0476790:intron | 55.0% |
CGACGATATACTGCCCTGTG+TGG | + | chr3_3:80702532-80702551 | Msa0476790:CDS | 55.0% | |
!! | GCTGTGGCTTTGTCCACACA+GGG | - | chr3_3:80702548-80702567 | None:intergenic | 55.0% |
!! | TGCTGTGGCTTTGTCCACAC+AGG | - | chr3_3:80702549-80702568 | None:intergenic | 55.0% |
TCGCAGAGGAGTGGCATCAA+GGG | - | chr3_3:80702701-80702720 | None:intergenic | 55.0% | |
ATCGCAGAGGAGTGGCATCA+AGG | - | chr3_3:80702702-80702721 | None:intergenic | 55.0% | |
GAACCTAAGCAACGCCACAC+AGG | + | chr3_3:80702769-80702788 | Msa0476790:CDS | 55.0% | |
GTACCTGTGTGGCGTTGCTT+AGG | - | chr3_3:80702775-80702794 | None:intergenic | 55.0% | |
TGGTCCAGCTCACGATGACT+CGG | - | chr3_3:80703006-80703025 | None:intergenic | 55.0% | |
! | ACCACTCAACCTGCGGATTG+AGG | + | chr3_3:80703022-80703041 | Msa0476790:intron | 55.0% |
! | ACCTCAATCCGCAGGTTGAG+TGG | - | chr3_3:80703026-80703045 | None:intergenic | 55.0% |
! | ACTCAACCTGCGGATTGAGG+TGG | + | chr3_3:80703025-80703044 | Msa0476790:intron | 55.0% |
! | CTCAACCTGCGGATTGAGGT+GGG | + | chr3_3:80703026-80703045 | Msa0476790:intron | 55.0% |
GGGTTACCCCTTGATCGAGT+CGG | + | chr3_3:80703046-80703065 | Msa0476790:intron | 55.0% | |
! | GGTTAGGTCCGACTCGATCA+AGG | - | chr3_3:80703057-80703076 | None:intergenic | 55.0% |
GGGGTGTGTATGGAAGAGAG+CGG | + | chr3_3:80703766-80703785 | Msa0476790:CDS | 55.0% | |
GTGTGTATGGAAGAGAGCGG+AGG | + | chr3_3:80703769-80703788 | Msa0476790:CDS | 55.0% | |
GGTGTAGGTGCACGTCTTGT+TGG | - | chr3_3:80703858-80703877 | None:intergenic | 55.0% | |
AGTGCAGGTGCACGTCTTGT+TGG | - | chr3_3:80703891-80703910 | None:intergenic | 55.0% | |
GTGAGCCTGATACAGGAGGC+TGG | + | chr3_3:80701794-80701813 | Msa0476790:intron | 60.0% | |
GAGGAGTGGCATCAAGGGAC+CGG | - | chr3_3:80702696-80702715 | None:intergenic | 60.0% | |
GTCCAGCTCACGATGACTCG+GGG | - | chr3_3:80703004-80703023 | None:intergenic | 60.0% | |
GGTCCAGCTCACGATGACTC+GGG | - | chr3_3:80703005-80703024 | None:intergenic | 60.0% | |
GAGCTGGACCACTCAACCTG+CGG | + | chr3_3:80703015-80703034 | Msa0476790:intron | 60.0% | |
GGTAACCCACCTCAATCCGC+AGG | - | chr3_3:80703034-80703053 | None:intergenic | 60.0% | |
GTTGGTGCAGGAGCTCGTGT+AGG | - | chr3_3:80703840-80703859 | None:intergenic | 60.0% | |
! | GGTGCACGTCTTGTTGGTGC+AGG | - | chr3_3:80703852-80703871 | None:intergenic | 60.0% |
GTTGGTGCAGGTGCAGGTGT+AGG | - | chr3_3:80703873-80703892 | None:intergenic | 60.0% | |
! | CGTCTTGTTGGTGCAGGTGC+AGG | - | chr3_3:80703879-80703898 | None:intergenic | 60.0% |
! | GGTGCACGTCTTGTTGGTGC+AGG | - | chr3_3:80703852-80703871 | None:intergenic | 60.0% |
GTTGGTGCAGGTGCAAGTGC+AGG | - | chr3_3:80703906-80703925 | None:intergenic | 60.0% | |
GTGAGCCTGATACAGGAGGC+TGG | + | chr3_3:80701794-80701813 | Msa0476790:intron | 60.0% | |
GAGGAGTGGCATCAAGGGAC+CGG | - | chr3_3:80702696-80702715 | None:intergenic | 60.0% | |
GTCCAGCTCACGATGACTCG+GGG | - | chr3_3:80703004-80703023 | None:intergenic | 60.0% | |
GGTCCAGCTCACGATGACTC+GGG | - | chr3_3:80703005-80703024 | None:intergenic | 60.0% | |
GAGCTGGACCACTCAACCTG+CGG | + | chr3_3:80703015-80703034 | Msa0476790:intron | 60.0% | |
GGTAACCCACCTCAATCCGC+AGG | - | chr3_3:80703034-80703053 | None:intergenic | 60.0% | |
GTTGGTGCAGGAGCTCGTGT+AGG | - | chr3_3:80703840-80703859 | None:intergenic | 60.0% | |
! | GGTGCACGTCTTGTTGGTGC+AGG | - | chr3_3:80703852-80703871 | None:intergenic | 60.0% |
GTTGGTGCAGGTGCAGGTGT+AGG | - | chr3_3:80703873-80703892 | None:intergenic | 60.0% | |
! | CGTCTTGTTGGTGCAGGTGC+AGG | - | chr3_3:80703879-80703898 | None:intergenic | 60.0% |
! | GGTGCACGTCTTGTTGGTGC+AGG | - | chr3_3:80703852-80703871 | None:intergenic | 60.0% |
GTTGGTGCAGGTGCAAGTGC+AGG | - | chr3_3:80703906-80703925 | None:intergenic | 60.0% | |
GAGCGCCAGCCTCCTGTATC+AGG | - | chr3_3:80701802-80701821 | None:intergenic | 65.0% | |
CGGAACGGATCGCAGAGGAG+TGG | - | chr3_3:80702710-80702729 | None:intergenic | 65.0% | |
CAGGACGGAACGGATCGCAG+AGG | - | chr3_3:80702715-80702734 | None:intergenic | 65.0% | |
GACCCCGAGTCATCGTGAGC+TGG | + | chr3_3:80702999-80703018 | Msa0476790:intron | 65.0% | |
GAGCGCCAGCCTCCTGTATC+AGG | - | chr3_3:80701802-80701821 | None:intergenic | 65.0% | |
CGGAACGGATCGCAGAGGAG+TGG | - | chr3_3:80702710-80702729 | None:intergenic | 65.0% | |
CAGGACGGAACGGATCGCAG+AGG | - | chr3_3:80702715-80702734 | None:intergenic | 65.0% | |
GACCCCGAGTCATCGTGAGC+TGG | + | chr3_3:80702999-80703018 | Msa0476790:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_3 | gene | 80700138 | 80704255 | 80700138 | ID=Msa0476790;Name=Msa0476790 |
chr3_3 | mRNA | 80700138 | 80704255 | 80700138 | ID=Msa0476790-mRNA-1;Parent=Msa0476790;Name=Msa0476790-mRNA-1;_AED=0.06;_eAED=0.06;_QI=146|1|1|1|1|1|9|275|579 |
chr3_3 | exon | 80700138 | 80700389 | 80700138 | ID=Msa0476790-mRNA-1:exon:22136;Parent=Msa0476790-mRNA-1 |
chr3_3 | exon | 80700617 | 80700792 | 80700617 | ID=Msa0476790-mRNA-1:exon:22137;Parent=Msa0476790-mRNA-1 |
chr3_3 | exon | 80701172 | 80701353 | 80701172 | ID=Msa0476790-mRNA-1:exon:22138;Parent=Msa0476790-mRNA-1 |
chr3_3 | exon | 80701434 | 80701718 | 80701434 | ID=Msa0476790-mRNA-1:exon:22139;Parent=Msa0476790-mRNA-1 |
chr3_3 | exon | 80701809 | 80701867 | 80701809 | ID=Msa0476790-mRNA-1:exon:22140;Parent=Msa0476790-mRNA-1 |
chr3_3 | exon | 80701987 | 80702023 | 80701987 | ID=Msa0476790-mRNA-1:exon:22141;Parent=Msa0476790-mRNA-1 |
chr3_3 | exon | 80702187 | 80702258 | 80702187 | ID=Msa0476790-mRNA-1:exon:22142;Parent=Msa0476790-mRNA-1 |
chr3_3 | exon | 80702466 | 80702790 | 80702466 | ID=Msa0476790-mRNA-1:exon:22143;Parent=Msa0476790-mRNA-1 |
chr3_3 | exon | 80703483 | 80704255 | 80703483 | ID=Msa0476790-mRNA-1:exon:22144;Parent=Msa0476790-mRNA-1 |
chr3_3 | five_prime_UTR | 80700138 | 80700283 | 80700138 | ID=Msa0476790-mRNA-1:five_prime_utr;Parent=Msa0476790-mRNA-1 |
chr3_3 | CDS | 80700284 | 80700389 | 80700284 | ID=Msa0476790-mRNA-1:cds;Parent=Msa0476790-mRNA-1 |
chr3_3 | CDS | 80700617 | 80700792 | 80700617 | ID=Msa0476790-mRNA-1:cds;Parent=Msa0476790-mRNA-1 |
chr3_3 | CDS | 80701172 | 80701353 | 80701172 | ID=Msa0476790-mRNA-1:cds;Parent=Msa0476790-mRNA-1 |
chr3_3 | CDS | 80701434 | 80701718 | 80701434 | ID=Msa0476790-mRNA-1:cds;Parent=Msa0476790-mRNA-1 |
chr3_3 | CDS | 80701809 | 80701867 | 80701809 | ID=Msa0476790-mRNA-1:cds;Parent=Msa0476790-mRNA-1 |
chr3_3 | CDS | 80701987 | 80702023 | 80701987 | ID=Msa0476790-mRNA-1:cds;Parent=Msa0476790-mRNA-1 |
chr3_3 | CDS | 80702187 | 80702258 | 80702187 | ID=Msa0476790-mRNA-1:cds;Parent=Msa0476790-mRNA-1 |
chr3_3 | CDS | 80702466 | 80702790 | 80702466 | ID=Msa0476790-mRNA-1:cds;Parent=Msa0476790-mRNA-1 |
chr3_3 | CDS | 80703483 | 80703980 | 80703483 | ID=Msa0476790-mRNA-1:cds;Parent=Msa0476790-mRNA-1 |
chr3_3 | three_prime_UTR | 80703981 | 80704255 | 80703981 | ID=Msa0476790-mRNA-1:three_prime_utr;Parent=Msa0476790-mRNA-1 |
Gene Sequence |
Protein sequence |